Zootoca vivipara (common lizard): 118085186
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Entry
118085186 CDS
T07275
Name
(RefSeq) regulator of nonsense transcripts 3A-like isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03013
Nucleocytoplasmic transport
zvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118085186
03015 mRNA surveillance pathway
118085186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118085186
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
118085186
mRNA cycle factors
P-body specific factors
118085186
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
118085186
NCBI-ProteinID:
XP_034971415
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All DBs
Position
LG5:complement(75077230..75091123)
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AA seq
484 aa
AA seq
DB search
MEAPLQRESPRRVPESPPTSPGPPPPPPPPPPLPPPPLPPPPSSLPPLPGKPQREDKRAA
LSKVVIRRLPPSFTKEQLEEQLHPLPAHDYFEFCTSDASLYPHLYSRAYINFRNPDDILL
FRDRFDGYVFIDSKGLEYPAVVEFAPFQKISKKKLKKKDAKAGSIEDDPEYRKFLESYCA
EEEKICANPETLLGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRESEK
KRLREDEKRKRREEERRKRKEAEKQKKMAEKEIRIKLLKKPEKGDEQATEKHREKEKADI
DESKWEKSPGHGSIKSKPLEGSLKEVKEKSQNDSDKEQRDSERRFREKEPERQRYRLDDS
RKHRSHYEFDKFVRRNEDEVKWGKGYSQDRGKKVNYNYSFTVDTVDKLGKEDKCDDMASK
KERIRNKDRPAMQLYQPGVRIRTHTGSTSRSYDCTEKSSEEAYDRKYEADNSPGGGSEKS
EEAE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggaggctccgcttcagcgggaatccccgcgtcgggtaccagagtcccctccgacgtcc
ccggggccgccgccgccgccccctcctcctccgccgctgccaccacccccgctgccacca
ccgccatccagcctgccgccgctgccggggaaaccgcagcgggaggataaaagagcggct
cttagtaaagtagttatacggcggctacctcctagttttaccaaggagcagctggaggaa
cagctccatccacttcctgctcacgattattttgaattttgtacctctgatgccagtctt
tatcctcatctctactcaagagcatatattaattttagaaatcctgatgacatccttctt
tttagagatcgctttgatggctatgtcttcatagacagtaaaggtttagaatacccagct
gttgttgaatttgcaccattccaaaagatttctaagaagaagctgaagaagaaagatgca
aaagctggaagcatagaagatgatccagaatacagaaaatttttagaaagttattgtgca
gaagaagaaaaaatatgtgctaaccctgagactctgctgggagagattgaggcaaaaaca
agagaactcattgctagaagaacaacaccacttttggaatatattaaaaatagaaaatta
gaaaaacagagaatccgagaagagaaaagggaagaacgaaggagaagagaatcagaaaaa
aaacgcctaagggaagatgagaagcggaagcgcagagaggaagaaaggcgtaaaagaaaa
gaagcagaaaagcaaaagaaaatggctgaaaaagaaataaggatcaagcttcttaagaaa
ccggagaaaggcgatgagcaagccacagaaaagcacagagaaaaagaaaaagctgacata
gacgagagtaaatgggagaaatcacctgggcacgggagtataaaatctaagcccctggaa
ggttcgctgaaggaagttaaggaaaagtctcaaaatgatagcgataaagagcaaagagat
tcagagagaagatttcgtgaaaaagaacctgagagacaaaggtatcgactggatgatagc
cgaaagcacagaagtcactatgaatttgacaagtttgtgagaaggaatgaagatgaggtg
aagtgggggaaaggatacagccaagatcgagggaagaaagtgaactacaactacagcttc
actgtggacacagtagacaaactgggtaaagaggacaagtgtgatgacatggcatccaaa
aaggagcgcataagaaataaggatcggccagccatgcaactataccagccaggagttcgc
attcgaacacatacggggtctacaagtaggtcctatgactgcactgaaaagtcttcagaa
gaagcttatgatagaaagtatgaagcagacaattcacctggaggtggttctgagaagagc
gaagaggcagaataa
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