+D GENES KO
#
KEGG Orthology (KO) - Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:aad00010]
D TC41_0106 glk; glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D TC41_0105 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TC41_2256 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TC41_1504 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D TC41_2255 fbaB; Fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TC41_0714 tpiA; Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TC41_2560 gapA; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TC41_0713 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D TC41_1698 gpm; Phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D TC41_0715 gpm; phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D TC41_0716 eno; Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TC41_2636 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TC41_1503 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D TC41_0588 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D TC41_0912 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D TC41_0587 pdhB; Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D TC41_0913 pdhB; Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D TC41_0586 aceF; Dihydrolipoyllysine-residue succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D TC41_0585 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TC41_2683 gatD; Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D TC41_2975 yahK; Alcohol dehydrogenase GroES domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D TC41_0193 betB; Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_0723 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_1093 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_2804 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_2177 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_0576 acs; AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_1177 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_1395 acs; AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_0894 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D TC41_2303 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D TC41_2872 manB; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:aad00020]
D TC41_0773 gltA; Citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D TC41_2347 gltA; 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1]
D TC41_0926 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D TC41_2632 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D TC41_1447 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D TC41_0581 icd; isocitrate/isopropylmalate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D TC41_2266 sucA; 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D TC41_2265 sucB; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TC41_0585 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TC41_1307 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D TC41_1305 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D TC41_1960 sdhA; succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D TC41_1959 sdhB; succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D TC41_1961 sdhC; succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D TC41_0705 fumA; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D TC41_2631 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TC41_2264 mqo; malate/quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D TC41_0588 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D TC41_0912 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D TC41_0587 pdhB; Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D TC41_0913 pdhB; Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D TC41_0586 aceF; Dihydrolipoyllysine-residue succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:aad00030]
D TC41_0105 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TC41_2843 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D TC41_3181 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D TC41_1097 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D TC41_0953 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D TC41_3122 talA; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D TC41_1980 rpiA; ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D TC41_2103 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D TC41_0388 rbsK; PfkB domain protein K00852 rbsK; ribokinase [EC:2.7.1.15]
D TC41_1648 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D TC41_2872 manB; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TC41_0246 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D TC41_2571 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D TC41_2272 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D TC41_3154 gntK; carbohydrate kinase FGGY K25031 gntK; gluconokinase [EC:2.7.1.12]
D TC41_2572 kdgK; PfkB domain protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D TC41_2255 fbaB; Fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TC41_1504 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D TC41_2256 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:aad00040]
D TC41_1470 uxaB; Mannitol dehydrogenase domain protein K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D TC41_1468 uxaA; Altronate dehydratase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D TC41_2570 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D TC41_2193 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TC41_2717 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TC41_3263 araD; class II aldolase/adducin family protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D TC41_0137 fucA; class II aldolase/adducin family protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D TC41_3262 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D TC41_0677 araB; L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D TC41_3264 araB; L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D TC41_2304 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D TC41_2305 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D TC41_0672 rhaB; Carbohydrate kinase, FGGY-like protein K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D TC41_0682 Carbohydrate kinase, FGGY K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D TC41_2611 gutB; Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D TC41_2814 gutB; Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D TC41_2914 oxidoreductase domain protein K14273 xdh; D-xylose 1-dehydrogenase (NADP+, D-xylono-1,5-lactone-forming) [EC:1.1.1.179]
D TC41_0430 Aldehyde Dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D TC41_0681 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
C 00051 Fructose and mannose metabolism [PATH:aad00051]
D TC41_2360 scrK; PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D TC41_2271 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D TC41_0469 manC; Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D TC41_0681 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D TC41_0672 rhaB; Carbohydrate kinase, FGGY-like protein K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D TC41_0682 Carbohydrate kinase, FGGY K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D TC41_2256 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TC41_1504 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D TC41_0292 mtlD; Mannitol dehydrogenase domain protein K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D TC41_0900 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D TC41_2611 gutB; Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D TC41_2814 gutB; Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D TC41_2305 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D TC41_2255 fbaB; Fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TC41_0714 tpiA; Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TC41_0897 ptsN; putative PTS IIA-like nitrogen-regulatory protein PtsN K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D TC41_0901 fruA; PTS system, fructose subfamily, IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D TC41_0291 mtlA; Protein-N(pi)-phosphohistidine--sugarphosphotran sferase K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D TC41_0288 mtlA; PTS system, mannitol-specific IIC subunit K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:aad00052]
D TC41_2303 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D TC41_2606 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D TC41_2605 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D TC41_1454 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TC41_2193 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TC41_2717 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TC41_2872 manB; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TC41_0106 glk; glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D TC41_1110 ebgA; glycoside hydrolase family 2 TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D TC41_3246 bgaB; beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D TC41_0766 galA; glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D TC41_2256 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TC41_3210 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:aad00053]
D TC41_3263 araD; class II aldolase/adducin family protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D TC41_0137 fucA; class II aldolase/adducin family protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D TC41_0193 betB; Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_0723 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_1093 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_2804 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:aad00500]
D TC41_3210 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D TC41_2193 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TC41_2717 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TC41_0453 bglX; glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D TC41_1995 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D TC41_2767 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D TC41_3211 alpha amylase catalytic region K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D TC41_3217 alpha amylase catalytic region K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D TC41_2872 manB; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TC41_0106 glk; glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D TC41_0105 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TC41_2360 scrK; PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:aad00520]
D TC41_0872 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D TC41_2360 scrK; PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D TC41_2997 glmS; glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D TC41_2998 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D TC41_0245 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D TC41_3087 murA; UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TC41_1207 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TC41_1202 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D TC41_3101 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D TC41_0032 wecC; nucleotide sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D TC41_3256 abfA; Alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D TC41_0106 glk; glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D TC41_2872 manB; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TC41_2193 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TC41_2717 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TC41_1261 sqd1; NAD-dependent epimerase/dehydratase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D TC41_2606 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D TC41_2605 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D TC41_1454 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TC41_0105 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TC41_2271 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D TC41_0469 manC; Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00620 Pyruvate metabolism [PATH:aad00620]
D TC41_2177 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_0576 acs; AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_1177 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_1395 acs; AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_0588 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D TC41_0912 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D TC41_0587 pdhB; Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D TC41_0913 pdhB; Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D TC41_0586 aceF; Dihydrolipoyllysine-residue succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D TC41_0585 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TC41_1516 mhpF; acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D TC41_0801 mhpF; acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D TC41_2683 gatD; Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D TC41_2975 yahK; Alcohol dehydrogenase GroES domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D TC41_2636 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TC41_2637 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TC41_2174 such; biotin/lipoyl attachment domain-containing protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TC41_1687 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TC41_2175 accC; Carbamoyl-phosphate synthase L chain ATP-binding protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TC41_1685 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TC41_2638 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D TC41_0193 betB; Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_0723 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_1093 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_2804 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_0894 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D TC41_0915 lldD; Lactate 2-monooxygenase K00467 E1.13.12.4; lactate 2-monooxygenase [EC:1.13.12.4]
D TC41_2823 dld; D-lactate dehydrogenase (cytochrome) K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D TC41_0849 2,5-didehydrogluconate reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D TC41_1367 gloA; Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D TC41_0510 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D TC41_2811 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D TC41_2272 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D TC41_0180 sfcA; Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D TC41_2263 sfcA; Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D TC41_2631 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TC41_2264 mqo; malate/quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D TC41_0705 fumA; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D TC41_2257 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D TC41_1503 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D TC41_2829 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D TC41_2178 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TC41_0855 leuA; 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D TC41_0345 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:aad00630]
D TC41_0033 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D TC41_2177 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_0576 acs; AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_1177 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_1395 acs; AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_2829 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D TC41_2631 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TC41_0773 gltA; Citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D TC41_2347 gltA; 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1]
D TC41_0926 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D TC41_2178 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TC41_2831 glcD; FAD linked oxidase domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D TC41_2833 glcE; FAD linked oxidase domain protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D TC41_2832 glcF; protein of unknown function DUF224 cysteine-rich region domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D TC41_1975 6-phosphogluconate dehydrogenase NAD-binding protein K18121 GLYR; glyoxylate/succinic semialdehyde reductase [EC:1.1.1.79 1.1.1.-]
D TC41_2272 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D TC41_1524 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TC41_2759 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TC41_1465 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TC41_3103 glyA; Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TC41_1700 gcvPA; Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D TC41_1699 gcvPB; Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D TC41_1701 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TC41_0585 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TC41_1594 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D TC41_2573 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D TC41_2571 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D TC41_0844 hoxU; formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D TC41_2024 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D TC41_2842 cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9]
D TC41_2707 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D TC41_2592 Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D TC41_0700 AMP-dependent synthetase and ligase K22133 AAE3; oxalate---CoA ligase [EC:6.2.1.8]
C 00640 Propanoate metabolism [PATH:aad00640]
D TC41_2177 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_0576 acs; AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_1177 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_1395 acs; AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_0894 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D TC41_0824 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D TC41_0825 bkdA2; Transketolase central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D TC41_0826 aceF; Dihydrolipoyllysine-residue succinyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D TC41_0585 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TC41_0836 quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D TC41_0827 paaG; Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D TC41_2637 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TC41_2174 such; biotin/lipoyl attachment domain-containing protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TC41_1687 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TC41_2175 accC; Carbamoyl-phosphate synthase L chain ATP-binding protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TC41_1685 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TC41_2638 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D TC41_1305 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D TC41_1307 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D TC41_0572 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D TC41_1393 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D TC41_0774 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D TC41_0775 methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D TC41_3145 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D TC41_0849 2,5-didehydrogluconate reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
C 00650 Butanoate metabolism [PATH:aad00650]
D TC41_2178 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TC41_1835 paaH; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D TC41_1172 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D TC41_1488 fadN; 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D TC41_0827 paaG; Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D TC41_3127 fadJ; Enoyl-CoA hydratase/isomerase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D TC41_1834 caiD; Enoyl-CoA hydratase/isomerase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D TC41_1516 mhpF; acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D TC41_0801 mhpF; acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D TC41_1960 sdhA; succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D TC41_1959 sdhB; succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D TC41_1961 sdhC; succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D TC41_0812 gabD; Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D TC41_1975 6-phosphogluconate dehydrogenase NAD-binding protein K18121 GLYR; glyoxylate/succinic semialdehyde reductase [EC:1.1.1.79 1.1.1.-]
D TC41_2173 hmgL; pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D TC41_2180 scoA; 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D TC41_2179 scoB; 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D TC41_0315 bdh; 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D TC41_2355 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TC41_2354 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:aad00660]
D TC41_2355 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TC41_2354 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D TC41_1305 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D TC41_1307 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D TC41_1506 hps-phi; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D TC41_2351 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D TC41_2350 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D TC41_2352 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:aad00562]
D TC41_1922 plcC; phosphoesterase K01114 plc; phospholipase C [EC:3.1.4.3]
D TC41_2569 cysQ; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D TC41_1009 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D TC41_1469 iolB; Myo-inositol catabolism IolB domain protein K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D TC41_0572 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D TC41_1393 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D TC41_0714 tpiA; Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:aad00190]
D TC41_0847 ndh; FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D TC41_2123 ndh; FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D TC41_1960 sdhA; succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D TC41_1959 sdhB; succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D TC41_1961 sdhC; succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D TC41_0928 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D TC41_0630 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D TC41_0629 cytochrome aa3 quinol oxidase, subunit IV K02829 qoxD; cytochrome aa3-600 menaquinol oxidase subunit IV [EC:7.1.1.5]
D TC41_0628 qoxC; cytochrome c oxidase subunit III K02828 qoxC; cytochrome aa3-600 menaquinol oxidase subunit III [EC:7.1.1.5]
D TC41_0627 qoxB; cytochrome aa3 quinol oxidase, subunit I K02827 qoxB; cytochrome aa3-600 menaquinol oxidase subunit I [EC:7.1.1.5]
D TC41_0626 qoxA; cytochrome C oxidase subunit II transmembrane region K02826 qoxA; cytochrome aa3-600 menaquinol oxidase subunit II [EC:7.1.1.5]
D TC41_2043 cydA; cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D TC41_2042 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D TC41_3094 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D TC41_3092 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D TC41_3093 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D TC41_3095 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D TC41_3091 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D TC41_3098 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D TC41_3096 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D TC41_3097 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D TC41_2777 ppa; Inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D TC41_2597 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:aad00680]
D TC41_0844 hoxU; formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D TC41_2024 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D TC41_3103 glyA; Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TC41_0716 eno; Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TC41_2257 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D TC41_2631 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TC41_2255 fbaB; Fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TC41_1504 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D TC41_2256 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TC41_2039 ferredoxin-dependent glutamate synthase K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21]
D TC41_2177 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_0576 acs; AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_1177 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_1395 acs; AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_1698 gpm; Phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D TC41_0715 gpm; phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D TC41_1144 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TC41_1145 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D TC41_2723 comA; Phosphosulfolactate synthase K08097 comA; phosphosulfolactate synthase [EC:4.4.1.19]
D TC41_1228 Phosphosulfolactate synthase K08097 comA; phosphosulfolactate synthase [EC:4.4.1.19]
C 00910 Nitrogen metabolism [PATH:aad00910]
D TC41_2592 Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D TC41_1096 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D TC41_1240 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D TC41_1609 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D TC41_1524 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TC41_2759 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TC41_1465 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TC41_1135 gltB; Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
C 00920 Sulfur metabolism [PATH:aad00920]
D TC41_3193 cysW; binding-protein-dependent transport systems inner membrane component K02047 cysW; sulfate/thiosulfate transport system permease protein
D TC41_3191 ABC transporter related protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D TC41_0873 met3; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D TC41_0604 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D TC41_1375 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D TC41_2712 cysH; adenylylsulfate reductase, thioredoxin dependent K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D TC41_2711 cysI; Sulfite reductase (NADPH) K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D TC41_0507 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D TC41_0303 hypothetical protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D TC41_0962 sseA; Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D TC41_2665 cysE; Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D TC41_2647 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D TC41_2064 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D TC41_0910 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:aad00061]
D TC41_2637 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TC41_2174 such; biotin/lipoyl attachment domain-containing protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TC41_1687 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TC41_2175 accC; Carbamoyl-phosphate synthase L chain ATP-binding protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TC41_1685 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TC41_2638 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D TC41_1273 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D TC41_2686 acyl carrier protein K02078 acpP; acyl carrier protein
D TC41_1271 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D TC41_0028 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D TC41_1274 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TC41_2701 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TC41_0198 fabG; short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_1272 fabG; short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_2187 fabG; short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_0186 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_1190 fabG; short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_0284 fabG; short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_3079 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TC41_0991 fabI; short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D TC41_2687 fabG; short-chain dehydrogenase/reductase SDR K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D TC41_2700 fabL; short-chain dehydrogenase/reductase SDR K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D TC41_0182 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TC41_2155 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TC41_1491 fadD; AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TC41_0393 fadD; AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation [PATH:aad00062]
D TC41_1172 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 00071 Fatty acid degradation [PATH:aad00071]
D TC41_2178 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TC41_1396 atoB; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D TC41_0187 atoB; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D TC41_1489 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D TC41_1172 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D TC41_0827 paaG; Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D TC41_1488 fadN; 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D TC41_0184 acd; acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D TC41_0201 acd; acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D TC41_0182 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TC41_2155 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TC41_1491 fadD; AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TC41_0393 fadD; AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TC41_2743 aas; AMP-dependent synthetase and ligase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D TC41_2683 gatD; Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D TC41_0193 betB; Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_0723 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_1093 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_2804 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:aad00561]
D TC41_2573 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D TC41_0193 betB; Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_0723 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_1093 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_2804 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_2975 yahK; Alcohol dehydrogenase GroES domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D TC41_0072 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D TC41_1270 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D TC41_3169 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TC41_1596 plsY; protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TC41_1601 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D TC41_2094 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D TC41_0174 PGAP1 family protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D TC41_2011 ugtP; Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D TC41_2008 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D TC41_1261 sqd1; NAD-dependent epimerase/dehydratase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D TC41_0766 galA; glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:aad00564]
D TC41_1595 gpsA; Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D TC41_0073 glpA; FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D TC41_3169 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TC41_1596 plsY; protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TC41_1601 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D TC41_2094 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D TC41_1922 plcC; phosphoesterase K01114 plc; phospholipase C [EC:3.1.4.3]
D TC41_0094 glpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D TC41_1067 glpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D TC41_2743 aas; AMP-dependent synthetase and ligase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D TC41_1363 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D TC41_3067 pssA; CDP-diacylglycerol/serineO-phosphatidyltransfera se K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D TC41_1260 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D TC41_1410 pgsA; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D TC41_1981 cls; phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D TC41_0093 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D TC41_1026 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D TC41_3080 CDP-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D TC41_3261 araM; 3-dehydroquinate synthase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
C 00565 Ether lipid metabolism
D TC41_1922 plcC; phosphoesterase K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:aad00600]
D TC41_1110 ebgA; glycoside hydrolase family 2 TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D TC41_0766 galA; glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:aad00592]
D TC41_1396 atoB; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D TC41_0187 atoB; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D TC41_1489 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
D TC41_0697 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:aad00230]
D TC41_1653 nudF; NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D TC41_1648 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D TC41_2872 manB; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TC41_0246 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D TC41_0525 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D TC41_0528 purD; phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D TC41_0286 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D TC41_0524 purL; phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D TC41_0522 purL; phosphoribosylformylglycinamidine synthase, purS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D TC41_0523 purL; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D TC41_0526 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D TC41_2253 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D TC41_2254 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D TC41_0521 purC; phosphoribosylaminoimidazole-succinocarboxamides ynthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D TC41_0520 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D TC41_0527 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D TC41_2216 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D TC41_0565 metallophosphoesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D TC41_1539 surE; stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D TC41_3182 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D TC41_1221 yfiH; protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D TC41_0265 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D TC41_0014 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D TC41_1587 ndk; Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D TC41_1525 protein of unknown function DUF84 K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D TC41_1945 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D TC41_0519 guaA; GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D TC41_0085 gmk; transcriptional regulator, XRE family K00942 gmk; guanylate kinase [EC:2.7.4.8]
D TC41_1985 nrdA; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TC41_1493 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TC41_1494 nrdB; Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D TC41_0173 nrdB; ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D TC41_0783 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D TC41_2215 relA; (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D TC41_2061 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D TC41_2546 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D TC41_3019 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D TC41_0604 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D TC41_0873 met3; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:aad00240]
D TC41_1235 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D TC41_1234 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D TC41_1232 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D TC41_1233 pyrC; dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D TC41_0992 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D TC41_1237 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D TC41_1236 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D TC41_1360 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D TC41_1587 ndk; Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D TC41_0917 maf; maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D TC41_3124 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D TC41_1603 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D TC41_0565 metallophosphoesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D TC41_1539 surE; stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D TC41_3102 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D TC41_1231 pyrR; Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D TC41_0709 pdp; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D TC41_0010 conserved hypothetical protein K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D TC41_1985 nrdA; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TC41_1493 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TC41_1494 nrdB; Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D TC41_0173 nrdB; ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D TC41_0783 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D TC41_0259 comEB; CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D TC41_0160 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D TC41_1383 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D TC41_0089 tdk; Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D TC41_2982 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D TC41_2978 b-alanine synthase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:aad00250]
D TC41_3138 aspB; aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TC41_2769 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D TC41_0124 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TC41_0858 aminotransferase class I and II K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D TC41_0996 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D TC41_1138 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D TC41_1139 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D TC41_2546 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D TC41_0520 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D TC41_1232 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D TC41_0812 gabD; Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D TC41_1135 gltB; Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D TC41_1240 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D TC41_1609 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D TC41_0438 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D TC41_1524 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TC41_2759 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TC41_1465 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TC41_1235 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D TC41_1234 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D TC41_0523 purL; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D TC41_2997 glmS; glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D TC41_0525 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:aad00260]
D TC41_1143 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TC41_1387 lysC; aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TC41_1386 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TC41_0407 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D TC41_2359 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D TC41_1039 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D TC41_1038 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D TC41_3103 glyA; Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TC41_2272 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D TC41_2573 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D TC41_1698 gpm; Phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D TC41_0715 gpm; phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D TC41_1144 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TC41_1145 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D TC41_1700 gcvPA; Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D TC41_1699 gcvPB; Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D TC41_1701 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TC41_0585 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TC41_1594 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D TC41_3067 pssA; CDP-diacylglycerol/serineO-phosphatidyltransfera se K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D TC41_0785 glycine betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D TC41_0776 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D TC41_1563 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D TC41_1564 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:aad00270]
D TC41_2665 cysE; Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D TC41_2647 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D TC41_1953 patB; aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D TC41_1476 mmuM; homocysteine S-methyltransferase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D TC41_0738 metE; 5-methyltetrahydropteroyltriglutamate/homocystei neS-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D TC41_2867 metK; Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D TC41_2337 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D TC41_3134 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D TC41_1221 yfiH; protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D TC41_1541 mtaD; amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D TC41_1543 mtaP; methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D TC41_1542 mtnA; translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D TC41_0120 mtnB; methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D TC41_0117 mtnW; Ribulose-bisphosphate carboxylase K08965 mtnW; 2,3-diketo-5-methylthiopentyl-1-phosphate enolase [EC:5.3.2.5]
D TC41_0119 mtnX; 2,3-diketo-5-methylthio-1-phosphopentanephosphat ase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87]
D TC41_0115 mtnD; Acireductone dioxygenase ARD K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D TC41_1069 mtnE; aminotransferase class I and II K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D TC41_2442 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D TC41_0485 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D TC41_1143 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TC41_1387 lysC; aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TC41_1386 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TC41_0407 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D TC41_2359 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D TC41_2064 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D TC41_0910 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D TC41_2358 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TC41_3138 aspB; aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TC41_0962 sseA; Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D TC41_0858 aminotransferase class I and II K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D TC41_2631 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TC41_1144 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TC41_1145 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:aad00280]
D TC41_2358 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TC41_1398 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D TC41_0824 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D TC41_0825 bkdA2; Transketolase central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D TC41_0826 aceF; Dihydrolipoyllysine-residue succinyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D TC41_0585 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TC41_0184 acd; acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D TC41_0201 acd; acyl-CoA dehydrogenase domain protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D TC41_0827 paaG; Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D TC41_1172 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D TC41_1396 atoB; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D TC41_0187 atoB; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D TC41_1489 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D TC41_1392 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D TC41_0572 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D TC41_1393 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D TC41_0193 betB; Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_0723 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_1093 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_2804 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_2173 hmgL; pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D TC41_2180 scoA; 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D TC41_2179 scoB; 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D TC41_2178 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:aad00290]
D TC41_0776 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D TC41_2351 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D TC41_2350 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D TC41_2352 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D TC41_2355 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TC41_2354 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D TC41_2353 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D TC41_2356 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D TC41_2358 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TC41_1398 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D TC41_0855 leuA; 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D TC41_0345 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:aad00300]
D TC41_0407 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D TC41_2359 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D TC41_1143 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TC41_1387 lysC; aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TC41_1386 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TC41_0462 dapA; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D TC41_1388 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D TC41_1552 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D TC41_1133 argD; acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D TC41_1992 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D TC41_0285 alaC; aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D TC41_0704 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D TC41_3183 dapD; Tetrahydrodipicolinate succinyltransferase domain protein K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D TC41_3186 patA; aminotransferase class I and II K00841 patA; aminotransferase [EC:2.6.1.-]
D TC41_3184 amidohydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D TC41_1197 murE; UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TC41_0400 murE; UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TC41_1531 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:aad00310]
D TC41_2265 sucB; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TC41_0585 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TC41_0827 paaG; Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D TC41_1172 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D TC41_2178 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TC41_0812 gabD; Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D TC41_1031 dat; aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D TC41_0193 betB; Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_0723 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_1093 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_2804 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:aad00220]
D TC41_1137 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D TC41_1138 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D TC41_1139 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D TC41_0436 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D TC41_0744 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6]
D TC41_0745 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D TC41_2620 nos; Nitric-oxide synthase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D TC41_0523 purL; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D TC41_1524 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TC41_2759 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TC41_1465 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TC41_1235 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D TC41_1234 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D TC41_1240 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D TC41_1609 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D TC41_3138 aspB; aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TC41_1134 argA; GCN5-related N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D TC41_1132 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D TC41_1130 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D TC41_1133 argD; acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:aad00330]
D TC41_1074 speA; Orn/Lys/Arg decarboxylase major region K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D TC41_3133 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D TC41_3134 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D TC41_2337 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D TC41_0193 betB; Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_0723 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_1093 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_2804 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_0903 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_2589 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_2590 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_0297 amiE; Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_0753 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_2620 nos; Nitric-oxide synthase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D TC41_0436 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D TC41_0437 rocD; ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D TC41_2875 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D TC41_2821 Proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D TC41_0438 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D TC41_3240 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D TC41_3239 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D TC41_2285 pip; proline-specific peptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D TC41_3138 aspB; aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TC41_1031 dat; aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:aad00340]
D TC41_0934 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D TC41_0933 hisZ; Histidine--tRNA ligase K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D TC41_0940 hisIE; phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D TC41_0938 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D TC41_0937 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D TC41_0939 hisF; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D TC41_0936 hisB; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D TC41_1966 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TC41_0823 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TC41_0935 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D TC41_0193 betB; Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_0723 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_1093 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_2804 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:aad00350]
D TC41_3138 aspB; aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TC41_1966 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TC41_0823 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TC41_2683 gatD; Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D TC41_0460 hpaB; 4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D TC41_1519 hpaD; Extradiol ring-cleavage dioxygenase class III protein subunit B K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15]
D TC41_0458 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D TC41_0457 hpaG; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D TC41_0812 gabD; Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D TC41_1829 Cupin 2 conserved barrel domain protein K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4]
C 00360 Phenylalanine metabolism [PATH:aad00360]
D TC41_0809 paaK; Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D TC41_0805 paaA; phenylacetate-CoA oxygenase, PaaG subunit K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D TC41_0806 phenylacetic acid degradation B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D TC41_0807 paaC; phenylacetate-CoA oxygenase, PaaI subunit K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D TC41_0808 paaD; phenylacetate-CoA oxygenase, PaaJ subunit K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D TC41_0813 paaG; Enoyl-CoA hydratase/isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D TC41_0827 paaG; Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D TC41_1835 paaH; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D TC41_3138 aspB; aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TC41_1966 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TC41_0823 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TC41_1031 dat; aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D TC41_0903 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_2589 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_2590 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_0297 amiE; Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_0753 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_1004 hcaC; Rieske (2Fe-2S) domain protein K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D TC41_1825 monooxygenase FAD-binding protein K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D TC41_1517 mhpD; 2-oxopent-4-enoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D TC41_1515 mhpE; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D TC41_1516 mhpF; acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D TC41_0801 mhpF; acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00380 Tryptophan metabolism [PATH:aad00380]
D TC41_2842 cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9]
D TC41_1512 amidohydrolase 2 K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45]
D TC41_1518 hpaE; Betaine-aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D TC41_2265 sucB; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TC41_0585 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TC41_0827 paaG; Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D TC41_1172 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D TC41_2178 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TC41_0193 betB; Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_0723 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_1093 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_2804 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_0903 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_2589 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_2590 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_0297 amiE; Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_0753 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:aad00400]
D TC41_1562 aroA; phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D TC41_2691 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D TC41_1569 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D TC41_1697 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D TC41_1705 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D TC41_0607 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D TC41_1570 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D TC41_1128 trpE; Anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D TC41_1127 trpG; glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D TC41_1567 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D TC41_1565 trpF; Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D TC41_1566 trpC; Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D TC41_1563 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D TC41_1564 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D TC41_1568 aroH; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D TC41_1561 tyrA2; Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D TC41_1368 pheA; Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D TC41_3138 aspB; aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TC41_1966 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TC41_0823 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:aad00410]
D TC41_2067 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D TC41_0405 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D TC41_0193 betB; Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_0723 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_1093 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_2804 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_2901 panC; pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D TC41_2982 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D TC41_2978 b-alanine synthase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D TC41_0827 paaG; Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D TC41_0572 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D TC41_1393 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:aad00430]
D TC41_0099 ggt; Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TC41_2977 aminotransferase class-III K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D TC41_0996 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D TC41_1240 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D TC41_1609 Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:aad00450]
D TC41_0910 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D TC41_1953 patB; aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D TC41_1476 mmuM; homocysteine S-methyltransferase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D TC41_0738 metE; 5-methyltetrahydropteroyltriglutamate/homocystei neS-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D TC41_1001 sufS; cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D TC41_0895 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D TC41_0873 met3; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D TC41_0168 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:aad00460]
D TC41_0453 bglX; glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D TC41_1995 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D TC41_0099 ggt; Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TC41_3103 glyA; Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TC41_2592 Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00470 D-Amino acid metabolism [PATH:aad00470]
D TC41_0482 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D TC41_1031 dat; aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D TC41_1532 ddl; D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TC41_0523 purL; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D TC41_1946 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D TC41_1199 murD; UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D TC41_1992 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D TC41_0704 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:aad00480]
D TC41_0099 ggt; Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TC41_3128 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D TC41_2632 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D TC41_1447 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D TC41_3181 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D TC41_1097 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D TC41_2843 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D TC41_0346 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D TC41_3134 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:aad00511]
D TC41_1110 ebgA; glycoside hydrolase family 2 TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D TC41_0448 Peptidoglycan-binding domain 1 protein K23989 lytD; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:3.2.1.96]
C 00540 Lipopolysaccharide biosynthesis
D TC41_2848 glycosyl transferase group 1 K02840 waaB; UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-]
D TC41_2849 waaB; glycosyl transferase group 1 K02840 waaB; UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:aad00541]
D TC41_2193 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TC41_2717 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TC41_1454 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TC41_2271 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D TC41_0469 manC; Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D TC41_0245 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D TC41_3101 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D TC41_0032 wecC; nucleotide sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:aad00550]
D TC41_3087 murA; UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TC41_1207 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TC41_1202 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D TC41_1925 murC; UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D TC41_1199 murD; UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D TC41_1197 murE; UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TC41_0400 murE; UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TC41_1532 ddl; D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TC41_1531 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D TC41_1362 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D TC41_0280 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TC41_1556 bacA; Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TC41_2933 phosphoesterase PA-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TC41_1198 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D TC41_1201 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D TC41_0468 Peptidoglycan glycosyltransferase K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D TC41_3137 penicillin-binding protein, 1A family K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D TC41_2613 mrdA; Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TC41_2720 mrdA; Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TC41_0401 mrdA; Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TC41_1195 pbpB; Peptidoglycan glycosyltransferase K08724 pbpB; penicillin-binding protein 2B
D TC41_1196 spoVD; stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D TC41_0631 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D TC41_0467 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D TC41_1647 dacC; Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D TC41_1063 domain of unknown function DUF1727 K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D TC41_1061 CobB/CobQ domain protein glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:aad00552]
D TC41_0280 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TC41_1556 bacA; Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TC41_2933 phosphoesterase PA-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TC41_2869 tagA; glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D TC41_1973 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D TC41_2011 ugtP; Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D TC41_2008 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:aad00543]
D TC41_0761 glycosyl transferase group 1 K20999 pslF; polysaccharide biosynthesis protein PslF
D TC41_2834 pgaC; glycosyl transferase family 2 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D TC41_2835 hypothetical protein K11937 pgaD; biofilm PGA synthesis protein PgaD
D TC41_2665 cysE; Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:aad00730]
D TC41_2960 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D TC41_2032 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D TC41_1184 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TC41_2144 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TC41_1185 thiI; thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D TC41_2775 thiO; glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D TC41_2738 dxs; deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D TC41_2773 thiG; thiazole biosynthesis family protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D TC41_2776 Thiamine-phosphate diphosphorylase K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D TC41_2033 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D TC41_2034 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D TC41_0491 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D TC41_1255 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D TC41_3019 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D TC41_2031 tenA; transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:aad00740]
D TC41_0948 ribBA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D TC41_0946 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D TC41_0949 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D TC41_0947 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D TC41_1377 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D TC41_2033 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D TC41_1653 nudF; NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D TC41_0781 ubiX; phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:aad00750]
D TC41_1145 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D TC41_1038 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D TC41_0015 pdxS; pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D TC41_0016 pdxT; SNO glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:aad00760]
D TC41_2769 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D TC41_2768 nadA; quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D TC41_0797 putative nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D TC41_1010 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D TC41_3182 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D TC41_0565 metallophosphoesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D TC41_1539 surE; stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D TC41_2131 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D TC41_2237 nadE; NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D TC41_1624 npdA; Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D TC41_1670 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D TC41_0812 gabD; Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:aad00770]
D TC41_2355 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TC41_2354 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D TC41_2353 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D TC41_2356 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D TC41_2902 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D TC41_3206 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D TC41_2901 panC; pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D TC41_2562 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D TC41_1246 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D TC41_1265 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D TC41_2626 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D TC41_0479 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D TC41_2358 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TC41_2982 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D TC41_2978 b-alanine synthase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D TC41_2067 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D TC41_0405 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D TC41_0193 betB; Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_0723 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_1093 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_2804 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:aad00780]
D TC41_1274 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TC41_2701 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TC41_0198 fabG; short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_1272 fabG; short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_2187 fabG; short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_0186 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_1190 fabG; short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_0284 fabG; short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_3079 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TC41_0991 fabI; short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D TC41_3197 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D TC41_1549 birA; biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:aad00785]
D TC41_1655 lipB; lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D TC41_1656 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D TC41_2542 biotin/lipoate A/B protein ligase K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D TC41_0585 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TC41_0588 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D TC41_0912 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D TC41_0587 pdhB; Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D TC41_0913 pdhB; Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D TC41_0586 aceF; Dihydrolipoyllysine-residue succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D TC41_2266 sucA; 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D TC41_2265 sucB; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TC41_0824 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D TC41_0825 bkdA2; Transketolase central region K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D TC41_0826 aceF; Dihydrolipoyllysine-residue succinyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D TC41_1700 gcvPA; Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D TC41_1699 gcvPB; Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D TC41_1701 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TC41_1594 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:aad00790]
D TC41_0988 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D TC41_3163 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D TC41_0975 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D TC41_0271 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D TC41_0270 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D TC41_1926 folC; FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D TC41_2349 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D TC41_0948 ribBA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D TC41_1287 pabBC; para-aminobenzoate synthase, subunit I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D TC41_2057 ptpS; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D TC41_2334 phhB; transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D TC41_2058 queE; Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D TC41_2659 queC; exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D TC41_2184 queF; 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D TC41_3144 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D TC41_1657 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D TC41_1658 moaE; molybdopterin converting factor, subunit 1 K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12]
D TC41_2192 moeA; molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D TC41_0501 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:aad00670]
D TC41_1677 folD; Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D TC41_3190 folD; Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D TC41_3103 glyA; Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TC41_0286 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D TC41_0527 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D TC41_1249 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D TC41_1701 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TC41_1476 mmuM; homocysteine S-methyltransferase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D TC41_2707 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D TC41_0500 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:aad00860]
D TC41_0875 gluQ; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TC41_1938 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D TC41_2159 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D TC41_1932 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D TC41_1934 hemB; Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D TC41_1936 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D TC41_1935 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D TC41_2207 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D TC41_2209 hemY; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D TC41_2208 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D TC41_1664 Chlorite dismutase K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D TC41_2710 cobA; uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D TC41_2713 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D TC41_0928 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D TC41_0630 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D TC41_2709 sirB; cobalamin (vitamin B12) biosynthesis CbiX protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D TC41_2053 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D TC41_2055 cobU; nicotinate-nucleotide/dimethylbenzimidazolephosp horibosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:aad00130]
D TC41_0781 ubiX; phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D TC41_1589 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D TC41_2018 menF; isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D TC41_2017 menD; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D TC41_2016 menH; alpha/beta hydrolase fold protein K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D TC41_0532 menC; Mandelate racemase/muconate lactonizing protein K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D TC41_2019 menE; O-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D TC41_2020 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D TC41_1040 thioesterase superfamily protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D TC41_2021 menA; 1,4-dihydroxy-2-naphthoateoctaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D TC41_1174 wrbA; flavoprotein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:aad00900]
D TC41_2738 dxs; deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D TC41_1364 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D TC41_3065 ispD; 4-diphosphocytidyl-2C-methyl-D-erythritolsynthas e K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D TC41_0241 ispE; 4-diphosphocytidyl-2C-methyl-D-erythritolkinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D TC41_3064 ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D TC41_0931 gcpE; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D TC41_1011 lytB; hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D TC41_2178 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TC41_0781 ubiX; phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D TC41_2737 idi; isopentenyl-diphosphate delta-isomerase, type 2 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D TC41_1674 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D TC41_3164 idsA; Polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D TC41_1590 hypothetical protein K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D TC41_1588 hepST; Polyprenyl synthetase K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D TC41_1362 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:aad00909]
D TC41_2733 shc; squalene-hopene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129]
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:aad00906]
D TC41_3165 crtB; Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D TC41_2731 crtB; Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D TC41_3166 crtN; phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D TC41_3168 lycopene cyclase domain protein K22502 crtY; lycopene beta-cyclase [EC:5.5.1.19]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:aad00903]
D TC41_0193 betB; Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_0723 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_1093 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_2804 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_1091 Alpha/beta hydrolase fold-3 domain protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation [PATH:aad00907]
D TC41_0827 paaG; Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D TC41_2173 hmgL; pyruvate carboxyltransferase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D TC41_1396 atoB; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D TC41_0187 atoB; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D TC41_1489 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D TC41_1172 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D TC41_0953 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D TC41_2018 menF; isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:aad00946]
D TC41_0453 bglX; glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D TC41_1995 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:aad00332]
D TC41_3240 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D TC41_3239 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:aad00261]
D TC41_0873 met3; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D TC41_1143 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TC41_1387 lysC; aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TC41_1386 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TC41_0462 dapA; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D TC41_1388 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D TC41_1552 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:aad00521]
D TC41_0106 glk; glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D TC41_2872 manB; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TC41_2569 cysQ; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D TC41_1009 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D TC41_0106 glk; glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:aad00401]
D TC41_1561 tyrA2; Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D TC41_3138 aspB; aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TC41_1966 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TC41_0823 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D TC41_1128 trpE; Anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D TC41_1127 trpG; glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D TC41_1271 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D TC41_0198 fabG; short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_1272 fabG; short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_2187 fabG; short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_0186 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_1190 fabG; short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_0284 fabG; short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_0991 fabI; short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D TC41_1273 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D TC41_2686 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:aad00999]
D TC41_2867 metK; Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D TC41_0453 bglX; glycoside hydrolase family 3 domain protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D TC41_1995 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:aad00362]
D TC41_1396 atoB; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D TC41_0187 atoB; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D TC41_1489 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D TC41_1517 mhpD; 2-oxopent-4-enoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D TC41_1515 mhpE; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D TC41_0802 mhpE; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]
D TC41_1516 mhpF; acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D TC41_0801 mhpF; acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D TC41_1518 hpaE; Betaine-aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D TC41_1513 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D TC41_1514 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77]
D TC41_1507 LmbE family protein K16515 galB; 4-oxalomesaconate hydratase [EC:4.2.1.83]
D TC41_1506 hps-phi; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D TC41_1521 pobA; 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D TC41_1121 AMP-dependent synthetase and ligase K04116 aliA; cyclohexanecarboxylate-CoA ligase [EC:6.2.1.-]
D TC41_2689 fadK; AMP-dependent synthetase and ligase K04116 aliA; cyclohexanecarboxylate-CoA ligase [EC:6.2.1.-]
D TC41_1118 acyl-CoA dehydrogenase domain protein K04117 aliB; cyclohexanecarboxyl-CoA dehydrogenase [EC:1.3.99.-]
D TC41_1120 short-chain dehydrogenase/reductase SDR K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D TC41_1488 fadN; 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D TC41_1948 acd; acyl-CoA dehydrogenase domain protein K16173 acd; glutaryl-CoA dehydrogenase (non-decarboxylating) [EC:1.3.99.32]
D TC41_0827 paaG; Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D TC41_1835 paaH; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D TC41_2178 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:aad00627]
D TC41_0903 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_2589 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_2590 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_0297 amiE; Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_0753 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_0781 ubiX; phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D TC41_0827 paaG; Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:aad00364]
D TC41_2873 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:aad00625]
D TC41_2683 gatD; Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D TC41_0193 betB; Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_0723 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_1093 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_2804 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TC41_2059 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:aad00361]
D TC41_2873 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D TC41_2059 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:aad00623]
D TC41_2873 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:aad00622]
D TC41_1518 hpaE; Betaine-aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D TC41_1513 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D TC41_1514 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77]
D TC41_0802 mhpE; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]
D TC41_1517 mhpD; 2-oxopent-4-enoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D TC41_1515 mhpE; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D TC41_1516 mhpF; acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D TC41_0801 mhpF; acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D TC41_1396 atoB; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D TC41_0187 atoB; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D TC41_1489 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:aad00643]
D TC41_0903 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_2589 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_2590 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_0297 amiE; Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TC41_0753 Acetamidase/Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation [PATH:aad00791]
D TC41_0745 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D TC41_0744 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6]
C 00930 Caprolactam degradation [PATH:aad00930]
D TC41_1091 Alpha/beta hydrolase fold-3 domain protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D TC41_0197 acyl-CoA dehydrogenase domain protein K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-]
D TC41_0827 paaG; Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D TC41_1172 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation [PATH:aad00621]
D TC41_1513 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D TC41_1514 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77]
D TC41_1517 mhpD; 2-oxopent-4-enoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D TC41_1515 mhpE; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D TC41_0802 mhpE; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]
D TC41_1516 mhpF; acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D TC41_0801 mhpF; acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00626 Naphthalene degradation [PATH:aad00626]
D TC41_2683 gatD; Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation [PATH:aad00365]
D TC41_0782 ubiD; 4-hydroxybenzoate decarboxylase K16874 hmfF; 2,5-furandicarboxylate decarboxylase 1
D TC41_0787 AMP-dependent synthetase and ligase K16876 hmfD; 2-furoate---CoA ligase [EC:6.2.1.31]
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:aad03020]
D TC41_3049 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D TC41_3048 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D TC41_3012 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D TC41_1245 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D TC41_3126 rpoE; DNA-directed RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:aad03010]
D TC41_1600 rpsA; RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D TC41_1358 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D TC41_3035 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D TC41_3013 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D TC41_3023 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D TC41_3291 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D TC41_3045 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D TC41_3027 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D TC41_3008 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D TC41_3042 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D TC41_3014 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D TC41_3046 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D TC41_3015 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D TC41_3028 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D TC41_1379 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D TC41_1280 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D TC41_3032 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D TC41_3289 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D TC41_3037 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D TC41_2120 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D TC41_2101 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D TC41_3053 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D TC41_3038 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D TC41_3041 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D TC41_3040 rplD; ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D TC41_3029 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D TC41_3026 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D TC41_3051 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D TC41_3287 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D TC41_3052 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D TC41_3054 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D TC41_3009 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D TC41_3031 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D TC41_3021 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D TC41_3034 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D TC41_3011 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D TC41_3025 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D TC41_1297 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D TC41_2293 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D TC41_1912 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D TC41_3036 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D TC41_3039 rplW; Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D TC41_3030 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D TC41_1910 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D TC41_1257 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D TC41_3033 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D TC41_3022 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D TC41_3117 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D TC41_1268 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D TC41_3057 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D TC41_3310 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D TC41_2294 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D TC41_3016 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D TC41_3047 ribosomal protein L7Ae/L30e/S12e/Gadd45 K07590 RP-L7A; large subunit ribosomal protein L7A
D TC41_R013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TC41_R001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TC41_R018 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TC41_R004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TC41_R007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TC41_R010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TC41_R005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TC41_R008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TC41_R014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TC41_R017 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TC41_R002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TC41_R011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TC41_R003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TC41_R015 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TC41_R012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TC41_R016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TC41_R006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TC41_R009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:aad00970]
D TC41_T051 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TC41_T025 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TC41_T015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TC41_T059 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TC41_T029 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TC41_T017 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TC41_T023 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TC41_T001 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TC41_T040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TC41_T026 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D TC41_T014 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D TC41_T060 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D TC41_T006 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D TC41_T003 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D TC41_T048 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D TC41_T058 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TC41_T044 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TC41_T061 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TC41_T008 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TC41_T043 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TC41_T012 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TC41_T021 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TC41_T049 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TC41_T011 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TC41_T041 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TC41_T054 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TC41_T010 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TC41_T057 tRNA-His K14226 tRNA-His; tRNA His
D TC41_T028 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D TC41_T005 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D TC41_T045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TC41_T053 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TC41_T047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TC41_T024 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TC41_T038 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TC41_T019 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TC41_T042 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TC41_T055 tRNA-Met K14230 tRNA-Met; tRNA Met
D TC41_T002 tRNA-Met K14230 tRNA-Met; tRNA Met
D TC41_T062 tRNA-Met K14230 tRNA-Met; tRNA Met
D TC41_T031 tRNA-Met K14230 tRNA-Met; tRNA Met
D TC41_T050 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D TC41_T063 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D TC41_T016 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TC41_T037 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TC41_T020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TC41_T004 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TC41_T007 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TC41_T022 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TC41_T030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TC41_T035 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TC41_T013 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TC41_T039 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TC41_T033 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TC41_T018 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TC41_T032 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TC41_T052 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TC41_T034 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D TC41_T056 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D TC41_T027 tRNA-Val K14237 tRNA-Val; tRNA Val
D TC41_T009 tRNA-Val K14237 tRNA-Val; tRNA Val
D TC41_T046 tRNA-Val K14237 tRNA-Val; tRNA Val
D TC41_T036 tRNA-Val K14237 tRNA-Val; tRNA Val
D TC41_0875 gluQ; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TC41_3063 gltX1; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D TC41_1964 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D TC41_0656 gatA; glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D TC41_1263 Amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D TC41_0657 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D TC41_0655 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D TC41_2141 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TC41_2156 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TC41_1534 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D TC41_1474 glyS1; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D TC41_2299 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D TC41_0017 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D TC41_3062 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D TC41_0168 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D TC41_1249 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D TC41_1927 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D TC41_0555 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TC41_2661 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D TC41_0274 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D TC41_0541 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TC41_2679 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D TC41_2157 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TC41_2251 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D TC41_2250 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D TC41_2243 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TC41_2635 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:aad03060]
D TC41_3020 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D TC41_3056 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D TC41_0717 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D TC41_2220 secDF; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D TC41_2219 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D TC41_2226 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D TC41_3307 yidC; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TC41_2846 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TC41_1279 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D TC41_1277 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TC41_0399 sec-independent translocation protein mttA K03116 tatA; sec-independent protein translocase protein TatA
D TC41_0398 tatC; Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D TC41_0757 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D TC41_1229 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:aad04122]
D TC41_1184 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TC41_2144 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TC41_0962 sseA; Rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D TC41_0957 mnmA; tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D TC41_3144 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D TC41_1658 moaE; molybdopterin converting factor, subunit 1 K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12]
D TC41_2772 moeB; UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D TC41_1657 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D TC41_1185 thiI; thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D TC41_2774 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D TC41_1907 hypothetical protein K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6]
C 03050 Proteasome
C 03018 RNA degradation [PATH:aad03018]
D TC41_0716 eno; Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TC41_1380 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D TC41_0720 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D TC41_1412 deaD; DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D TC41_3120 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D TC41_1415 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D TC41_1400 rnj; beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D TC41_2166 hydrolase of the metallo-beta-lactamase superfamily-like protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D TC41_2256 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TC41_2109 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TC41_0505 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TC41_1431 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D TC41_2597 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:aad03030]
D TC41_2757 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TC41_2640 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TC41_1366 polC; DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D TC41_0129 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TC41_0162 holB; DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TC41_2122 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TC41_0003 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TC41_1866 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TC41_2490 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TC41_3286 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D TC41_2089 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D TC41_3290 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TC41_0577 rnhA; Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D TC41_1299 rnhB; Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D TC41_2629 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TC41_0652 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:aad03410]
D TC41_0566 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D TC41_0553 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D TC41_2627 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D TC41_0866 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D TC41_2557 xthA; exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D TC41_1033 nfo; apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D TC41_2629 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TC41_2217 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TC41_0652 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:aad03420]
D TC41_0249 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D TC41_0539 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D TC41_0538 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D TC41_1962 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D TC41_0651 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TC41_0103 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TC41_0969 uvrD; UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TC41_0883 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TC41_1615 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TC41_2629 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TC41_0652 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:aad03430]
D TC41_1427 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D TC41_2246 mutS2; MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D TC41_1428 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D TC41_0651 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TC41_0103 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TC41_0969 uvrD; UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TC41_0883 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TC41_1615 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TC41_1676 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D TC41_1675 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D TC41_2480 exoX; DNA polymerase III, epsilon subunit K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D TC41_1850 exoX; DNA polymerase III, epsilon subunit K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D TC41_2217 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TC41_3290 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TC41_2640 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TC41_1366 polC; DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D TC41_0003 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TC41_1866 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TC41_2490 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TC41_0129 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TC41_2122 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TC41_0162 holB; DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TC41_2757 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TC41_0652 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TC41_1788 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TC41_2457 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TC41_2963 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TC41_1764 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:aad03440]
D TC41_2217 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TC41_3290 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TC41_0005 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D TC41_2091 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D TC41_0131 recR; recombination protein RecR K06187 recR; recombination protein RecR
D TC41_1413 recA; recA protein K03553 recA; recombination protein RecA
D TC41_2629 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TC41_2233 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D TC41_2232 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D TC41_2234 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D TC41_1258 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D TC41_2640 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TC41_1366 polC; DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D TC41_0003 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TC41_1866 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TC41_2490 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TC41_0129 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TC41_2122 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TC41_0162 holB; DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TC41_2757 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TC41_1247 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:aad03450]
D TC41_1546 Ku protein K10979 ku; DNA end-binding protein Ku
D TC41_1544 lig; DNA polymerase LigD, polymerase domain protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D TC41_1545 lig; ATP dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:aad02010]
D TC41_3193 cysW; binding-protein-dependent transport systems inner membrane component K02047 cysW; sulfate/thiosulfate transport system permease protein
D TC41_3191 ABC transporter related protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D TC41_2367 ABC-type molybdate transport system periplasmic component-like protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D TC41_2368 cysT; binding-protein-dependent transport systems inner membrane component K15496 wtpB; molybdate/tungstate transport system permease protein
D TC41_0053 afuA; extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D TC41_0052 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D TC41_0051 afuC; ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D TC41_2261 msmX; ABC transporter related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D TC41_3216 malE; maltose binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D TC41_3215 malF; binding-protein-dependent transport systems inner membrane component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D TC41_3214 malG; binding-protein-dependent transport systems inner membrane component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D TC41_2931 msmE; solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D TC41_2930 binding-protein-dependent transport systems inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D TC41_2929 hypothetical protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D TC41_2928 sugar ABC superfamily ATP binding cassette transporter, membrane protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D TC41_1106 lacE; extracellular solute-binding protein family 1 K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D TC41_1107 lacF; binding-protein-dependent transport systems inner membrane component K10189 lacF; lactose/L-arabinose transport system permease protein
D TC41_1108 binding-protein-dependent transport systems inner membrane component K10190 lacG; lactose/L-arabinose transport system permease protein
D TC41_2364 extracellular solute-binding protein family 1 K10236 thuE; trehalose/maltose transport system substrate-binding protein
D TC41_2363 binding-protein-dependent transport systems inner membrane component K10237 thuF; trehalose/maltose transport system permease protein
D TC41_2361 binding-protein-dependent transport systems inner membrane component K10238 thuG; trehalose/maltose transport system permease protein
D TC41_0045 bmpA; basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D TC41_0043 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D TC41_0042 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D TC41_0044 ABC transporter related protein K23537 nupA; general nucleoside transport system ATP-binding protein
D TC41_2588 extracellular solute-binding protein family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein
D TC41_0680 rbsB; periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D TC41_2553 rbsB; putative sugar ABC transporter periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D TC41_2555 rbsC; Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D TC41_2556 rbsA; ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D TC41_0678 hypothetical protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D TC41_0339 xylF; xylose binding protein transport system K10543 xylF; D-xylose transport system substrate-binding protein
D TC41_0341 xylH; inner-membrane translocator K10544 xylH; D-xylose transport system permease protein
D TC41_0340 ABC transporter related protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D TC41_0095 ugpB; extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D TC41_0097 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D TC41_0096 ugpE; binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D TC41_2014 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D TC41_2013 pstC; phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D TC41_2012 pstA; phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D TC41_2003 pstB; phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D TC41_2766 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D TC41_2765 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D TC41_2764 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D TC41_2763 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D TC41_2762 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D TC41_0307 BioY protein K03523 bioY; biotin transport system substrate-specific component
D TC41_0305 ABC transporter related protein K16785 ecfT; energy-coupling factor transport system permease protein
D TC41_0306 ABC transporter related protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D TC41_0534 ftsX; protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D TC41_0533 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D TC41_0833 ABC transporter related protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D TC41_2531 cyclic nucleotide-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D TC41_2564 ABC transporter related protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D TC41_2530 ABC transporter related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D TC41_0835 ABC transporter related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D TC41_2563 ABC transporter related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D TC41_0838 ABC transporter related protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D TC41_0839 ABC transporter related protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D TC41_2040 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D TC41_2041 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:aad02060]
D TC41_0294 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D TC41_0293 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D TC41_0291 mtlA; Protein-N(pi)-phosphohistidine--sugarphosphotran sferase K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D TC41_0288 mtlA; PTS system, mannitol-specific IIC subunit K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D TC41_0901 fruA; PTS system, fructose subfamily, IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D TC41_0897 ptsN; putative PTS IIA-like nitrogen-regulatory protein PtsN K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D TC41_0900 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:aad03070]
D TC41_1904 Type II secretion system F domain protein K02455 gspF; general secretion pathway protein F
D TC41_1903 hypothetical protein K02456 gspG; general secretion pathway protein G
D TC41_1905 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D TC41_2220 secDF; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D TC41_2219 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D TC41_3056 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D TC41_0717 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D TC41_3020 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D TC41_2226 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D TC41_3307 yidC; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TC41_2846 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TC41_1277 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TC41_1279 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D TC41_0399 sec-independent translocation protein mttA K03116 tatA; sec-independent protein translocase protein TatA
D TC41_0398 tatC; Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:aad02020]
D TC41_2862 phoR; PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TC41_0060 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TC41_2863 phoB; two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D TC41_2014 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D TC41_2729 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D TC41_3279 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D TC41_1619 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D TC41_2854 fliC; flagellin domain protein K02406 fliC; flagellin
D TC41_2859 putative RNA polymerase, sigma 28 subunit, FliA/WhiG family K02405 fliA; RNA polymerase sigma factor FliA
D TC41_0536 motA; MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D TC41_0328 kdpD; sensor kinase subunit kdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D TC41_0332 kdpD; Osmosensitive K channel His kinase sensor K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D TC41_0327 kdpE; two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D TC41_0329 kdpA; potassium-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D TC41_0330 kdpB; K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D TC41_0331 kdpC; Potassium-transporting ATPase K01548 kdpC; potassium-transporting ATPase KdpC subunit
D TC41_1626 resE; PAS/PAC sensor signal transduction histidine kinase K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D TC41_1627 resD; two component transcriptional regulator, winged helix family K07775 resD; two-component system, OmpR family, response regulator ResD
D TC41_0630 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D TC41_3283 vicK; PAS/PAC sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D TC41_3284 vicR; two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR
D TC41_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D TC41_2541 baeS; histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D TC41_2543 qseC; integral membrane sensor signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D TC41_2544 two component transcriptional regulator, winged helix family K18941 arlR; two-component system, OmpR family, response regulator ArlR
D TC41_2075 kinA; PAS/PAC sensor signal transduction histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D TC41_0081 PAS/PAC sensor signal transduction histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D TC41_3123 spo0F; response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D TC41_1667 spo0A; sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D TC41_0180 sfcA; Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D TC41_2263 sfcA; Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D TC41_0622 desK; histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D TC41_0623 two component transcriptional regulator, LuxR family K07693 desR; two-component system, NarL family, response regulator DesR
D TC41_0511 liaS; PAS/PAC sensor signal transduction histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D TC41_0512 nreC; two component transcriptional regulator, LuxR family K07696 nreC; two-component system, NarL family, response regulator NreC
D TC41_2388 cpaF; type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D TC41_1718 cpaF; type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D TC41_2387 hypothetical protein K12510 tadB; tight adherence protein B
D TC41_3248 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D TC41_1524 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TC41_2759 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TC41_1465 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TC41_2178 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TC41_0442 rpoN; RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D TC41_0413 type IV pilin K02650 pilA; type IV pilus assembly protein PilA
D TC41_1585 cheR; MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D TC41_0142 mcp; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TC41_0148 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TC41_2587 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TC41_2705 mcp; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TC41_2258 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TC41_0145 hemAT; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TC41_0147 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D TC41_1352 cheW; CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D TC41_0146 cheA; CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TC41_1351 cheA; CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TC41_0143 cheY; response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TC41_1341 cheY; response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TC41_1350 cheB; CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TC41_2547 yesM; hypothetical protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D TC41_0788 yesN; two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D TC41_2552 response regulator receiver protein K07720 yesN; two-component system, response regulator YesN
D TC41_0884 transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D TC41_2043 cydA; cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D TC41_2042 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D TC41_0890 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D TC41_3101 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D TC41_0032 wecC; nucleotide sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D TC41_2767 glycoside hydrolase family 9 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D TC41_0436 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:aad02024]
D TC41_1431 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D TC41_1128 trpE; Anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D TC41_1127 trpG; glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D TC41_0327 kdpE; two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D TC41_0182 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TC41_2155 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TC41_1491 fadD; AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TC41_0393 fadD; AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TC41_0946 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D TC41_2541 baeS; histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D TC41_2766 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D TC41_2765 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D TC41_2764 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D TC41_2763 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D TC41_2762 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D TC41_0069 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TC41_2783 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TC41_2784 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TC41_2809 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TC41_2000 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TC41_2534 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TC41_2537 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TC41_3244 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TC41_1999 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TC41_2535 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TC41_1998 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TC41_2536 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TC41_2539 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TC41_1997 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TC41_2538 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TC41_1996 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TC41_3307 yidC; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TC41_3056 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D TC41_0717 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D TC41_3020 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D TC41_2226 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D TC41_2846 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TC41_1277 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TC41_1279 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D TC41_3123 spo0F; response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D TC41_1667 spo0A; sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D TC41_1922 plcC; phosphoesterase K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:aad02030]
D TC41_0142 mcp; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TC41_0148 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TC41_2587 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TC41_2705 mcp; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TC41_2258 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TC41_0145 hemAT; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TC41_0680 rbsB; periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D TC41_2553 rbsB; putative sugar ABC transporter periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D TC41_0146 cheA; CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TC41_1351 cheA; CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TC41_0147 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D TC41_1352 cheW; CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D TC41_0143 cheY; response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TC41_1341 cheY; response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TC41_1353 cheC; CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D TC41_0144 CheC domain protein K03409 cheX; chemotaxis protein CheX
D TC41_1350 cheB; CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TC41_1354 cheD; CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D TC41_1585 cheR; MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D TC41_1326 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D TC41_1339 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D TC41_1340 fliNY; CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN
D TC41_0536 motA; MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D TC41_0537 motB; OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:aad02040]
D TC41_1324 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D TC41_1325 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D TC41_1326 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D TC41_1327 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH
D TC41_1328 fliI; ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D TC41_1331 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D TC41_1338 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D TC41_1339 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D TC41_1340 fliNY; CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN
D TC41_1342 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D TC41_1343 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D TC41_1344 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D TC41_1345 fliR; type III secretion system inner membrane R protein K02421 fliR; flagellar biosynthesis protein FliR
D TC41_1347 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D TC41_1346 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D TC41_1322 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D TC41_1323 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D TC41_1333 flgD; flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D TC41_1335 flgE; protein of unknown function DUF1078 domain protein K02390 flgE; flagellar hook protein FlgE
D TC41_3082 flagellar basal body rod protein K02390 flgE; flagellar hook protein FlgE
D TC41_3081 flgG; flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG
D TC41_2856 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D TC41_2855 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D TC41_2854 fliC; flagellin domain protein K02406 fliC; flagellin
D TC41_2853 fliD; flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D TC41_0536 motA; MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D TC41_0537 motB; OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D TC41_2088 rpoD; RNA polymerase, sigma 70 subunit, RpoD family K03086 rpoD; RNA polymerase primary sigma factor
D TC41_0442 rpoN; RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D TC41_2859 putative RNA polymerase, sigma 28 subunit, FliA/WhiG family K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D TC41_0716 eno; Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D TC41_2053 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:aad01501]
D TC41_2766 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D TC41_2765 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D TC41_2764 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D TC41_2763 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D TC41_2762 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D TC41_0468 Peptidoglycan glycosyltransferase K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D TC41_2613 mrdA; Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TC41_2720 mrdA; Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TC41_0401 mrdA; Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:aad01502]
D TC41_1532 ddl; D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TC41_0482 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D TC41_1531 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D TC41_1198 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D TC41_1201 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:aad01503]
D TC41_3007 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D TC41_2729 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D TC41_3279 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D TC41_1619 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:aad01000]
C 01001 Protein kinases [BR:aad01001]
D TC41_1253 serine/threonine protein kinase with PASTA sensor(s) K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D TC41_2862 phoR; PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TC41_0060 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TC41_0328 kdpD; sensor kinase subunit kdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D TC41_0332 kdpD; Osmosensitive K channel His kinase sensor K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D TC41_1626 resE; PAS/PAC sensor signal transduction histidine kinase K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D TC41_3283 vicK; PAS/PAC sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D TC41_2541 baeS; histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D TC41_2543 qseC; integral membrane sensor signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D TC41_0642 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D TC41_0622 desK; histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D TC41_0511 liaS; PAS/PAC sensor signal transduction histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D TC41_2075 kinA; PAS/PAC sensor signal transduction histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D TC41_0081 PAS/PAC sensor signal transduction histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D TC41_0146 cheA; CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TC41_1351 cheA; CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TC41_2547 yesM; hypothetical protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:aad01009]
D TC41_0485 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D TC41_2256 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TC41_1252 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:aad01002]
D TC41_1229 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D TC41_0425 pilD; peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D TC41_2119 gpr; spore protease K06012 gpr; spore protease [EC:3.4.24.78]
D TC41_1217 spoIIGA; peptidase U4 sporulation factor SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D TC41_0100 pcp; pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D TC41_0519 guaA; GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D TC41_2006 NLP/P60 protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D TC41_2194 NLP/P60 protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D TC41_2722 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D TC41_0525 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D TC41_1135 gltB; Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D TC41_2997 glmS; glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D TC41_0124 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TC41_2799 pfpI; intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
D TC41_0190 srtA; sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D TC41_0710 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D TC41_1417 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D TC41_1654 peptidase M20 K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D TC41_3184 amidohydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D TC41_1290 Peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D TC41_0473 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D TC41_1016 pepQ; peptidase M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D TC41_3147 pepP; peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D TC41_0098 peptidase M29 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-]
D TC41_0989 iadA; isoaspartyl dipeptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]
D TC41_0266 ftsH; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D TC41_1535 Vesicle-fusing ATPase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D TC41_1913 spoIVFB; peptidase M50 K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-]
D TC41_1365 rseP; membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D TC41_1622 conserved hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D TC41_2729 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D TC41_3279 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D TC41_1619 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D TC41_0837 ptrB; Oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D TC41_0631 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D TC41_0467 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D TC41_1647 dacC; Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D TC41_1943 clpP; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D TC41_1183 clpP; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D TC41_1940 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D TC41_1941 lonB; Sigma 54 interacting domain protein K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53]
D TC41_1472 lexA; transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
D TC41_0757 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D TC41_2285 pip; proline-specific peptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D TC41_0239 cphB; cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D TC41_0737 Pro-Kumamolisin K08677 kscP; kumamolisin [EC:3.4.21.123]
D TC41_0325 Peptidase S53 propeptide K08677 kscP; kumamolisin [EC:3.4.21.123]
D TC41_0074 Peptidase S53 propeptide K08677 kscP; kumamolisin [EC:3.4.21.123]
D TC41_1668 spoIVB; stage IV sporulation protein B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D TC41_1318 hslV; 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D TC41_0099 ggt; Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C 01003 Glycosyltransferases [BR:aad01003]
D TC41_1974 Dolichyl-phosphate beta-D-mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D TC41_2011 ugtP; Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D TC41_2008 Monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D TC41_0468 Peptidoglycan glycosyltransferase K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D TC41_3137 penicillin-binding protein, 1A family K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D TC41_0761 glycosyl transferase group 1 K20999 pslF; polysaccharide biosynthesis protein PslF
D TC41_0732 glycosyl transferase group 1 K21011 pelF; polysaccharide biosynthesis protein PelF
D TC41_2869 tagA; glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D TC41_0771 chvB; putative carbohydrate binding protein K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
D TC41_2834 pgaC; glycosyl transferase family 2 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:aad01005]
D TC41_2848 glycosyl transferase group 1 K02840 waaB; UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-]
D TC41_2849 waaB; glycosyl transferase group 1 K02840 waaB; UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-]
D TC41_2715 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:aad01011]
D TC41_3087 murA; UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TC41_1207 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TC41_1202 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D TC41_1925 murC; UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D TC41_1199 murD; UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D TC41_1197 murE; UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TC41_0400 murE; UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TC41_1532 ddl; D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TC41_0482 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D TC41_1946 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D TC41_1198 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D TC41_1201 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D TC41_0280 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TC41_1556 bacA; Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TC41_2933 phosphoesterase PA-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TC41_0468 Peptidoglycan glycosyltransferase K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D TC41_3137 penicillin-binding protein, 1A family K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D TC41_2613 mrdA; Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TC41_2720 mrdA; Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TC41_0401 mrdA; Peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TC41_1195 pbpB; Peptidoglycan glycosyltransferase K08724 pbpB; penicillin-binding protein 2B
D TC41_1196 spoVD; stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D TC41_0631 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D TC41_0467 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D TC41_1647 dacC; Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D TC41_2006 NLP/P60 protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D TC41_2194 NLP/P60 protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D TC41_2722 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D TC41_1290 Peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D TC41_0190 srtA; sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D TC41_2625 slt; Lytic transglycosylase catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D TC41_2138 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D TC41_1607 cwlJ; spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D TC41_3086 spoIID; SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D TC41_3007 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:aad01004]
D TC41_1271 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D TC41_0028 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D TC41_1274 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TC41_2701 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TC41_0198 fabG; short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_1272 fabG; short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_2187 fabG; short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_0186 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_1190 fabG; short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_0284 fabG; short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TC41_3079 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TC41_0991 fabI; short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D TC41_2687 fabG; short-chain dehydrogenase/reductase SDR K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D TC41_2700 fabL; short-chain dehydrogenase/reductase SDR K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D TC41_0697 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D TC41_1289 thioesterase superfamily protein K12500 tesC; thioesterase III [EC:3.1.2.-]
D TC41_2177 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_0576 acs; AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_1177 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_1395 acs; AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TC41_0894 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D TC41_2685 dhbE; AMP-dependent synthetase and ligase K12507 fadK; acyl-CoA synthetase [EC:6.2.1.-]
D TC41_0182 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TC41_2155 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TC41_1491 fadD; AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TC41_0393 fadD; AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TC41_0914 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D TC41_1832 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D TC41_1270 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D TC41_3169 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TC41_1596 plsY; protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TC41_1601 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:aad01006]
D TC41_3164 idsA; Polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D TC41_1674 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D TC41_1590 hypothetical protein K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D TC41_1588 hepST; Polyprenyl synthetase K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D TC41_1362 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D TC41_3165 crtB; Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D TC41_2731 crtB; Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D TC41_1430 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D TC41_2021 menA; 1,4-dihydroxy-2-naphthoateoctaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D TC41_0928 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:aad01007]
D TC41_0875 gluQ; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TC41_3063 gltX1; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D TC41_1964 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D TC41_2243 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TC41_2635 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D TC41_3062 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D TC41_0541 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TC41_0168 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D TC41_2661 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D TC41_1927 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D TC41_0555 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TC41_0274 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D TC41_2156 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TC41_1534 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D TC41_2157 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TC41_1474 glyS1; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D TC41_0017 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D TC41_2679 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D TC41_2299 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D TC41_2141 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TC41_2251 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D TC41_2250 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D TC41_3138 aspB; aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TC41_1069 mtnE; aminotransferase class I and II K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D TC41_0285 alaC; aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D TC41_3186 patA; aminotransferase class I and II K00841 patA; aminotransferase [EC:2.6.1.-]
D TC41_2973 aminotransferase class I and II K10907 K10907; aminotransferase [EC:2.6.1.-]
D TC41_1966 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TC41_0823 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TC41_1953 patB; aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D TC41_0437 rocD; ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D TC41_1133 argD; acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D TC41_2977 aminotransferase class-III K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D TC41_2159 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D TC41_1932 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D TC41_1031 dat; aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D TC41_2358 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TC41_1287 pabBC; para-aminobenzoate synthase, subunit I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D TC41_1145 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:aad00194]
D TC41_3091 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D TC41_3092 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D TC41_3093 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D TC41_3094 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D TC41_3095 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D TC41_3096 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D TC41_3097 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D TC41_3098 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D TC41_3099 hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:aad03000]
D TC41_2442 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D TC41_2565 araC; transcriptional regulator, AraC family K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D TC41_2545 cysB; transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D TC41_3277 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D TC41_0899 fruR2; transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D TC41_3084 spoIIID; sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D TC41_1501 putative signal transduction protein with CBS domains K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D TC41_1611 lacI; transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D TC41_0921 cytR; transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D TC41_1467 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D TC41_2888 purR; purine operon repressor, PurR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D TC41_2365 cytR; transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D TC41_3180 kdgR; transcriptional regulator, LacI family K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D TC41_0065 purR; purine operon repressor, PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D TC41_1124 purR; purine operon repressor, PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D TC41_3267 araR; transcriptional regulator, GntR family with LacI sensor K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D TC41_1955 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D TC41_0556 pdhR; regulatory protein GntR HTH K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D TC41_0613 ytrA; transcriptional regulator, GntR family K07979 ytrA; GntR family transcriptional regulator
D TC41_1175 gntR; transcriptional regulator, GntR family K11476 gntR; GntR family transcriptional regulator, gluconate operon transcriptional repressor
D TC41_0113 transcriptional regulator, TetR family K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D TC41_1486 ysiA; transcriptional regulator, TetR family K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein
D TC41_0804 transcriptional regulator, TetR family K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D TC41_1952 gerE; transcriptional regulator, LuxR family K01994 gerE; LuxR family transcriptional regulator, transcriptional regulator of spore coat protein
D TC41_1947 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D TC41_2046 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D TC41_1464 glnR; transcriptional regulator, MerR family K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D TC41_0068 transcriptional regulator, MerR family K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon
D TC41_2907 zurR; ferric uptake regulator, Fur family K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D TC41_2817 perR; ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D TC41_2830 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D TC41_1520 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D TC41_2371 nsrR; transcriptional regulator, BadM/Rrf2 family K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D TC41_2145 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D TC41_1005 iscR; transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D TC41_3222 transcriptional regulator, MarR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D TC41_0907 transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D TC41_2204 troR; iron (metal) dependent repressor, DtxR family K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D TC41_2127 iron (metal) dependent repressor, DtxR family K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D TC41_1549 birA; biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D TC41_0242 purR; purine operon repressor, PurR K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D TC41_0429 rocR; PAS modulated sigma54 specific transcriptional regulator, Fis family K06714 rocR; arginine utilization regulatory protein
D TC41_0439 rocR; PAS modulated sigma54 specific transcriptional regulator, Fis family K06714 rocR; arginine utilization regulatory protein
D TC41_2667 codY; GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D TC41_2519 hypothetical protein K07729 K07729; putative transcriptional regulator
D TC41_1892 hypothetical protein K07729 K07729; putative transcriptional regulator
D TC41_0483 ydcD; putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D TC41_0290 mtlR2; transcriptional antiterminator, BglG K03483 mtlR; mannitol operon transcriptional activator
D TC41_2965 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D TC41_2376 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D TC41_1707 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D TC41_0166 abrB; transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D TC41_1769 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_1778 transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_2438 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_2444 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_3300 parB; parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_3302 parB; parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_1768 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_2432 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_0066 glpP; glycerol-3-phosphate responsive antiterminator, GlpP K02443 glpP; glycerol uptake operon antiterminator
D TC41_2648 argR; arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism
D TC41_2111 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D TC41_2031 tenA; transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D TC41_2776 Thiamine-phosphate diphosphorylase K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D TC41_3073 ctsR; transcriptional repressor, CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D TC41_2561 cggR; transcriptional regulator, DeoR family K05311 cggR; central glycolytic genes regulator
D TC41_1591 mtrB1; tryptophan RNA-binding attenuator protein K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein)
D TC41_1231 pyrR; Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D TC41_0561 transcription factor, RsfA family K06314 rsfA; prespore-specific regulator
D TC41_1187 transcription factor, RsfA family K06314 rsfA; prespore-specific regulator
D TC41_0822 paiB; FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D TC41_1227 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D TC41_1986 nrdR; ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR
D TC41_1192 mraZ; MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:aad03021]
D TC41_3012 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D TC41_3049 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D TC41_3048 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D TC41_3126 rpoE; DNA-directed RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
D TC41_1245 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D TC41_2088 rpoD; RNA polymerase, sigma 70 subunit, RpoD family K03086 rpoD; RNA polymerase primary sigma factor
D TC41_0295 rpoE; RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D TC41_0395 rpoE; RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D TC41_0981 RNA polymerase, sigma 28 subunit, FliA/WhiG family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D TC41_1643 RNA polymerase, sigma 28 subunit, SigF K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D TC41_2135 RNA polymerase, sigma 28 subunit, SigK K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D TC41_1218 RNA polymerase, sigma 28 subunit, SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D TC41_1219 RNA polymerase, sigma 28 subunit, FliA/WhiG family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D TC41_1871 RNA polymerase, sigma 28 subunit, FliA/WhiG family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D TC41_3058 RNA polymerase, sigma-24 subunit, ECF subfamily K27000 sigH; RNA polymerase sigma-H factor
D TC41_2447 RNA polymerase, sigma-24 subunit, ECF subfamily K27000 sigH; RNA polymerase sigma-H factor
D TC41_1780 RNA polymerase, sigma-24 subunit, ECF subfamily K27000 sigH; RNA polymerase sigma-H factor
D TC41_2231 RNA polymerase, sigma 28 subunit, SigI K03093 sigI; RNA polymerase sigma-I factor
D TC41_0442 rpoN; RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D TC41_2859 putative RNA polymerase, sigma 28 subunit, FliA/WhiG family K02405 fliA; RNA polymerase sigma factor FliA
D TC41_1371 nusA; NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D TC41_1680 nusB; NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D TC41_3055 nusG; NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D TC41_1227 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D TC41_0273 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D TC41_3120 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:aad03019]
D TC41_1275 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TC41_1400 rnj; beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D TC41_2166 hydrolase of the metallo-beta-lactamase superfamily-like protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D TC41_1415 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D TC41_0720 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D TC41_1412 deaD; DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D TC41_0716 eno; Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TC41_1380 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D TC41_3120 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D TC41_2256 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TC41_2109 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TC41_0505 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TC41_1431 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D TC41_2597 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D TC41_0546 hypothetical protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:aad03011]
D TC41_1600 rpsA; RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D TC41_1358 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D TC41_3035 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D TC41_3013 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D TC41_3023 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D TC41_3291 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D TC41_3045 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D TC41_3027 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D TC41_3008 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D TC41_3042 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D TC41_3014 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D TC41_3046 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D TC41_3015 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D TC41_3028 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D TC41_1379 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D TC41_1280 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D TC41_3032 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D TC41_3289 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D TC41_3037 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D TC41_2120 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D TC41_2101 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D TC41_3053 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D TC41_3038 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D TC41_3041 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D TC41_3040 rplD; ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D TC41_3029 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D TC41_3026 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D TC41_3287 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D TC41_3052 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D TC41_3054 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D TC41_3051 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D TC41_3009 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D TC41_3031 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D TC41_3021 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D TC41_3034 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D TC41_3011 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D TC41_3025 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D TC41_1297 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D TC41_2293 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D TC41_1912 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D TC41_3036 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D TC41_3039 rplW; Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D TC41_3030 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D TC41_1910 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D TC41_1257 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D TC41_3033 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D TC41_3022 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D TC41_3117 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D TC41_1268 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D TC41_3057 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D TC41_3310 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D TC41_2294 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D TC41_3016 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D TC41_3047 ribosomal protein L7Ae/L30e/S12e/Gadd45 K07590 RP-L7A; large subunit ribosomal protein L7A
D TC41_R003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TC41_R015 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TC41_R012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TC41_R016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TC41_R006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TC41_R009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TC41_R013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TC41_R001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TC41_R018 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TC41_R004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TC41_R007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TC41_R010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TC41_R005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TC41_R008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TC41_R014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TC41_R017 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TC41_R002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TC41_R011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:aad03009]
D TC41_1275 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TC41_2093 era; GTP-binding protein Era K03595 era; GTPase
D TC41_1908 obg; GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D TC41_1227 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D TC41_1371 nusA; NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D TC41_1680 nusB; NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D TC41_3055 nusG; NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D TC41_2883 rsuA; pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D TC41_0171 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D TC41_1250 rsmB; sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D TC41_3050 rsmC; methyltransferase small K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D TC41_1264 rsmD; methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D TC41_2105 rsmE; protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D TC41_3303 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D TC41_1193 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D TC41_0165 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D TC41_1429 protein of unknown function DUF548 K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D TC41_1672 tlyA; hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D TC41_3060 yjfH; RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D TC41_3278 ybeA; protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D TC41_1389 rlmI; Protein of unknown function methylase putative K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D TC41_1251 rlmN; radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D TC41_0658 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D TC41_1629 rluB; pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D TC41_1288 rluC; pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D TC41_0973 rluD; pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D TC41_1230 rluD; pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D TC41_1574 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D TC41_0494 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D TC41_0649 rimL; GCN5-related N-acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D TC41_1283 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D TC41_2106 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D TC41_2139 ruvX; Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D TC41_3061 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D TC41_1412 deaD; DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D TC41_1255 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D TC41_1598 engA; small GTP-binding protein K03977 engA; GTPase
D TC41_1298 rbgA; ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A
D TC41_1462 hflX; GTP-binding proten HflX K03665 hflX; GTPase
D TC41_2133 ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase
D TC41_3113 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D TC41_2215 relA; (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D TC41_1374 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D TC41_1370 rimP; protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D TC41_0004 S4 domain protein YaaA K14761 rlbA; ribosome-associated protein
D TC41_2129 ybeB; iojap-like protein K09710 ybeB; ribosome-associated protein
D TC41_2095 ybeY; protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D TC41_2847 yhbH; sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D TC41_3292 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D TC41_1267 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:aad03016]
D TC41_0614 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D TC41_1550 pcnB; tRNA cytidylyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D TC41_0875 gluQ; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TC41_2679 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D TC41_2661 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D TC41_0555 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TC41_0168 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D TC41_0541 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TC41_0274 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D TC41_2156 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TC41_2141 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TC41_1534 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D TC41_1474 glyS1; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D TC41_2299 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D TC41_0017 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D TC41_3062 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D TC41_1927 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D TC41_2157 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TC41_2251 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D TC41_2250 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D TC41_2243 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TC41_2635 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D TC41_2214 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D TC41_1030 hit; histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D TC41_0878 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D TC41_3010 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D TC41_1376 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D TC41_1184 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TC41_2144 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TC41_3113 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D TC41_1430 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D TC41_3305 mnmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D TC41_3304 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D TC41_3309 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D TC41_3063 gltX1; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D TC41_1964 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D TC41_0126 tadA; CMP/dCMP deaminase zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D TC41_2198 dusB; TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D TC41_1425 miaB; RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D TC41_2104 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D TC41_1315 gid; gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D TC41_1284 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D TC41_2282 trmH; tRNA/rRNA methyltransferase (SpoU) K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D TC41_2086 protein of unknown function DUF633 K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D TC41_0584 cspR; tRNA/rRNA methyltransferase (SpoU) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D TC41_2292 spoU; tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family
D TC41_0957 mnmA; tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D TC41_1078 iscA; iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D TC41_2660 iron-sulfur cluster assembly protein K13628 iscA; iron-sulfur cluster assembly protein
D TC41_2228 queA; S-adenosylmethionine/tRNA-ribosyltransferase-iso merase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D TC41_2659 queC; exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D TC41_2057 ptpS; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D TC41_2058 queE; Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D TC41_2184 queF; 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D TC41_0578 domain of unknown function DUF1730 K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D TC41_2227 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D TC41_1185 thiI; thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D TC41_0264 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D TC41_0493 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D TC41_0495 gcp; metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D TC41_0492 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D TC41_0720 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D TC41_1380 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:aad03012]
D TC41_1373 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D TC41_2295 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D TC41_0497 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D TC41_1359 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D TC41_3043 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D TC41_3044 fusA; translation elongation factor G K02355 fusA; elongation factor G
D TC41_3116 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D TC41_1361 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D TC41_3115 hemK; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D TC41_0247 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D TC41_3017 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D TC41_1696 efp; translation elongation factor P K02356 efp; elongation factor P
D TC41_2844 prfB; hypothetical protein K02836 prfB; peptide chain release factor 2
D TC41_0759 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:aad03110]
D TC41_3070 clpC; ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D TC41_0779 clpE; ATPase AAA-2 domain protein K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D TC41_1942 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D TC41_1320 hslU; heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D TC41_2109 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TC41_0505 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TC41_2107 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D TC41_0269 hslO; Hsp33 protein K04083 hslO; molecular chaperone Hsp33
D TC41_2110 GrpE protein K03687 GRPE; molecular chaperone GrpE
D TC41_1482 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D TC41_0504 groES; chaperonin Cpn10 K04078 groES; chaperonin GroES
D TC41_2729 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D TC41_3279 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D TC41_1619 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D TC41_0266 ftsH; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D TC41_1535 Vesicle-fusing ATPase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D TC41_3098 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D TC41_0701 ppiD; PpiC-type peptidyl-prolyl cis-trans isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D TC41_0867 trxA; thioredoxin K03671 TXN; thioredoxin
D TC41_1169 ybbN; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:aad04131]
D TC41_1587 ndk; Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D TC41_2560 gapA; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TC41_2636 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system [BR:aad04121]
C 03051 Proteasome
C 03032 DNA replication proteins [BR:aad03032]
D TC41_0577 rnhA; Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D TC41_2442 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D TC41_2396 hupB; histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D TC41_0251 hupB; histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D TC41_1727 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D TC41_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D TC41_3286 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D TC41_2089 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D TC41_3290 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TC41_2640 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TC41_1366 polC; DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D TC41_0003 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TC41_1866 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TC41_2490 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TC41_2122 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TC41_0162 holB; DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TC41_2757 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TC41_0129 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TC41_1299 rnhB; Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D TC41_2629 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TC41_0652 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TC41_1788 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TC41_2457 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TC41_2963 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TC41_1764 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TC41_0007 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D TC41_0006 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D TC41_1314 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:aad03036]
D TC41_2442 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D TC41_1275 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TC41_2396 hupB; histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D TC41_0251 hupB; histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D TC41_1727 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D TC41_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D TC41_0671 dps; Ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D TC41_1431 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D TC41_1276 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D TC41_1635 scpA; chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D TC41_1634 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D TC41_1212 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D TC41_0255 Septum formation initiator K13052 divIC; cell division protein DivIC
D TC41_0533 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D TC41_1403 ftsK; cell division protein FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D TC41_0381 TcpA K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D TC41_1208 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ
D TC41_1200 ftsW; stage V sporulation protein E K03588 ftsW; cell division protein FtsW
D TC41_1065 rodA; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D TC41_0534 ftsX; protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D TC41_1213 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D TC41_2249 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA
D TC41_3007 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D TC41_1916 minC; Septum formation inhibitor MinC K03610 minC; septum site-determining protein MinC
D TC41_1915 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D TC41_1225 divIVA; DivIVA family protein K04074 divIVA; cell division initiation protein
D TC41_3083 mreB; cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D TC41_1919 mreB; cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D TC41_1918 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D TC41_1917 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D TC41_1068 rodA; cell cycle protein K05837 rodA; rod shape determining protein RodA
D TC41_3301 parA; Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D TC41_2429 hypothetical protein K03496 parA; chromosome partitioning protein
D TC41_1769 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_1778 transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_2438 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_2444 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_3300 parB; parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_3302 parB; parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_1768 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_2432 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_3304 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D TC41_3303 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D TC41_1315 gid; gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D TC41_1317 xerC; integrase family protein K03733 xerC; integrase/recombinase XerC
D TC41_0361 hypothetical protein K04763 xerD; integrase/recombinase XerD
D TC41_1649 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D TC41_0250 yabN; MazG family protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D TC41_3005 mrp; protein of unknown function DUF59 K03593 mrp; ATP-binding protein involved in chromosome partitioning
D TC41_1939 engB; small GTP-binding protein K03978 engB; GTP-binding protein
D TC41_0548 protein of unknown function DUF199 K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:aad03400]
D TC41_0579 ogt; methylated-DNA/protein-cysteinemethyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D TC41_0553 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D TC41_0566 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D TC41_0545 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D TC41_1084 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D TC41_1383 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D TC41_0866 tag; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D TC41_2627 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D TC41_2557 xthA; exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D TC41_1033 nfo; apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D TC41_2217 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TC41_0652 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TC41_2629 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TC41_0539 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D TC41_0538 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D TC41_1962 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D TC41_0651 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TC41_0103 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TC41_0969 uvrD; UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TC41_0883 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TC41_1615 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TC41_3049 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D TC41_3048 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D TC41_3012 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D TC41_3126 rpoE; DNA-directed RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
D TC41_1245 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D TC41_0249 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D TC41_1427 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D TC41_2246 mutS2; MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D TC41_1428 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D TC41_1676 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D TC41_1675 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D TC41_2480 exoX; DNA polymerase III, epsilon subunit K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D TC41_1850 exoX; DNA polymerase III, epsilon subunit K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D TC41_2640 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TC41_1366 polC; DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D TC41_0003 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TC41_1866 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TC41_2490 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TC41_2122 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TC41_0162 holB; DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TC41_2757 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TC41_0129 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TC41_3290 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TC41_1788 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TC41_2457 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TC41_2963 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TC41_1764 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TC41_1413 recA; recA protein K03553 recA; recombination protein RecA
D TC41_2233 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D TC41_2232 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D TC41_2234 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D TC41_2484 endodeoxyribonuclease RusA K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
D TC41_1852 endodeoxyribonuclease RusA K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
D TC41_1247 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D TC41_0390 sbcC; SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50
D TC41_0389 sbcD; nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D TC41_3069 sms; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D TC41_0005 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D TC41_1258 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D TC41_2091 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D TC41_0131 recR; recombination protein RecR K06187 recR; recombination protein RecR
D TC41_1669 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D TC41_2195 UvrD/REP helicase K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D TC41_2196 ATP-dependent nuclease subunit B-like protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D TC41_2954 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D TC41_1546 Ku protein K10979 ku; DNA end-binding protein Ku
D TC41_1544 lig; DNA polymerase LigD, polymerase domain protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D TC41_1545 lig; ATP dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D TC41_0007 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D TC41_0006 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D TC41_1314 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D TC41_2396 hupB; histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D TC41_0251 hupB; histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D TC41_1727 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D TC41_2650 dinB; DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D TC41_1472 lexA; transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
D TC41_1023 DNA repair nucleotidyltransferase/DNA polymerase-like protein K14161 imuB; protein ImuB
D TC41_1025 dnaE2; DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D TC41_1414 regulatory protein RecX K03565 recX; regulatory protein
D TC41_1547 dinG; Exonuclease RNase T and DNA polymerase III K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D TC41_2335 NUDIX hydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D TC41_1985 nrdA; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TC41_1493 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TC41_1494 nrdB; Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D TC41_0173 nrdB; ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D TC41_0783 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D TC41_1375 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:aad03029]
D TC41_1373 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D TC41_2295 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D TC41_1359 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D TC41_3043 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D TC41_3044 fusA; translation elongation factor G K02355 fusA; elongation factor G
D TC41_2093 era; GTP-binding protein Era K03595 era; GTPase
D TC41_2243 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TC41_0555 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TC41_2156 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TC41_1474 glyS1; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D TC41_0541 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TC41_0656 gatA; glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D TC41_1263 Amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D TC41_0657 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D TC41_0655 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D TC41_3290 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TC41_2109 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TC41_2110 GrpE protein K03687 GRPE; molecular chaperone GrpE
D TC41_0505 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TC41_0504 groES; chaperonin Cpn10 K04078 groES; chaperonin GroES
D TC41_2107 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D TC41_1184 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TC41_2144 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TC41_3005 mrp; protein of unknown function DUF59 K03593 mrp; ATP-binding protein involved in chromosome partitioning
D TC41_0928 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D TC41_0630 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D TC41_3307 yidC; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:aad02000]
D TC41_0833 ABC transporter related protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D TC41_2531 cyclic nucleotide-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D TC41_2564 ABC transporter related protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D TC41_2530 ABC transporter related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D TC41_0835 ABC transporter related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D TC41_2563 ABC transporter related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D TC41_0838 ABC transporter related protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D TC41_0839 ABC transporter related protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D TC41_0443 ABC transporter related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TC41_0444 ABC transporter related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TC41_2040 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D TC41_2041 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D TC41_3193 cysW; binding-protein-dependent transport systems inner membrane component K02047 cysW; sulfate/thiosulfate transport system permease protein
D TC41_3191 ABC transporter related protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D TC41_2367 ABC-type molybdate transport system periplasmic component-like protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D TC41_2368 cysT; binding-protein-dependent transport systems inner membrane component K15496 wtpB; molybdate/tungstate transport system permease protein
D TC41_0053 afuA; extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D TC41_0052 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D TC41_0051 afuC; ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D TC41_2261 msmX; ABC transporter related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D TC41_3216 malE; maltose binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D TC41_3215 malF; binding-protein-dependent transport systems inner membrane component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D TC41_3214 malG; binding-protein-dependent transport systems inner membrane component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D TC41_2931 msmE; solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D TC41_2930 binding-protein-dependent transport systems inner membrane component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D TC41_2929 hypothetical protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D TC41_2928 sugar ABC superfamily ATP binding cassette transporter, membrane protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D TC41_2588 extracellular solute-binding protein family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein
D TC41_2364 extracellular solute-binding protein family 1 K10236 thuE; trehalose/maltose transport system substrate-binding protein
D TC41_2363 binding-protein-dependent transport systems inner membrane component K10237 thuF; trehalose/maltose transport system permease protein
D TC41_2361 binding-protein-dependent transport systems inner membrane component K10238 thuG; trehalose/maltose transport system permease protein
D TC41_1106 lacE; extracellular solute-binding protein family 1 K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D TC41_1107 lacF; binding-protein-dependent transport systems inner membrane component K10189 lacF; lactose/L-arabinose transport system permease protein
D TC41_1108 binding-protein-dependent transport systems inner membrane component K10190 lacG; lactose/L-arabinose transport system permease protein
D TC41_0339 xylF; xylose binding protein transport system K10543 xylF; D-xylose transport system substrate-binding protein
D TC41_0341 xylH; inner-membrane translocator K10544 xylH; D-xylose transport system permease protein
D TC41_0340 ABC transporter related protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D TC41_0680 rbsB; periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D TC41_2553 rbsB; putative sugar ABC transporter periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D TC41_2555 rbsC; Monosaccharide-transporting ATPase K10440 rbsC; ribose transport system permease protein
D TC41_2556 rbsA; ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D TC41_0678 hypothetical protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D TC41_0095 ugpB; extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D TC41_0097 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D TC41_0096 ugpE; binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D TC41_2751 extracellular solute-binding protein family 1 K25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein
D TC41_2750 binding-protein-dependent transport systems inner membrane component K25677 yesP; pectin-derived oligosaccharide transport system permease protein
D TC41_2749 binding-protein-dependent transport systems inner membrane component K25678 yesQ; pectin-derived oligosaccharide transport system permease protein
D TC41_0045 bmpA; basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D TC41_0043 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D TC41_0042 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein
D TC41_0044 ABC transporter related protein K23537 nupA; general nucleoside transport system ATP-binding protein
D TC41_3199 hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D TC41_3200 ABC transporter related protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D TC41_2169 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D TC41_3259 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D TC41_0923 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D TC41_0750 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D TC41_0748 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D TC41_3258 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D TC41_0924 lacF; binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D TC41_2167 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D TC41_0747 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D TC41_0925 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D TC41_2168 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D TC41_3257 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D TC41_2014 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D TC41_2013 pstC; phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D TC41_2012 pstA; phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D TC41_2003 pstB; phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D TC41_2766 extracellular solute-binding protein family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D TC41_2765 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D TC41_2764 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D TC41_2763 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D TC41_2762 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D TC41_0069 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TC41_2783 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TC41_2784 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TC41_2809 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TC41_2000 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TC41_2534 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TC41_2537 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TC41_3244 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TC41_1999 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TC41_2535 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TC41_1998 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TC41_2536 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TC41_2539 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TC41_1997 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TC41_2538 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TC41_1996 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TC41_0869 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D TC41_2050 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D TC41_2049 transport system permease protein K25027 btuC; cobalamin transport system permease protein
D TC41_2048 ABC transporter related protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D TC41_0307 BioY protein K03523 bioY; biotin transport system substrate-specific component
D TC41_0305 ABC transporter related protein K16785 ecfT; energy-coupling factor transport system permease protein
D TC41_0306 ABC transporter related protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D TC41_0952 cbiO; ABC transporter related protein K24040 ecfTA; energy-coupling factor transport system permease/ATP-binding protein [EC:7.-.-.-]
D TC41_0951 ABC-type thiamin-related transport system, permease component 1, predicted K16925 ykoE; energy-coupling factor transport system permease protein
D TC41_2908 periplasmic solute binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D TC41_2911 ABC-3 protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D TC41_2910 znuB; ABC-3 protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D TC41_2909 znuC; ABC transporter related protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D TC41_0054 ABC-2 type transporter K25140 drrB; daunorubicin/doxorubicin transport system permease protein
D TC41_0055 daunorubicin resistance ABC transporter ATPase subunit K25141 drrA; daunorubicin/doxorubicin transport system ATP-binding protein
D TC41_0534 ftsX; protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D TC41_0533 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D TC41_0609 bacitracin transport permease protein BcrB K01992 ABC-2.P; ABC-2 type transport system permease protein
D TC41_0620 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D TC41_2162 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D TC41_1164 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TC41_2163 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TC41_0612 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TC41_0619 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TC41_0610 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TC41_0386 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D TC41_2341 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D TC41_0385 lolD; abc transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TC41_2342 lolD; ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TC41_0998 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D TC41_1471 xylE; sugar transporter K02100 araE; MFS transporter, SP family, arabinose:H+ symporter
D TC41_3265 araE; sugar transporter K02100 araE; MFS transporter, SP family, arabinose:H+ symporter
D TC41_3221 glcP; hypothetical protein K08174 glcP; MFS transporter, FHS family, glucose/mannose:H+ symporter
D TC41_0784 proP; major facilitator superfamily MFS_1 K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D TC41_2824 major facilitator superfamily MFS_1 K08178 JEN; MFS transporter, SHS family, lactate transporter
D TC41_2787 exuT; major facilitator superfamily MFS_1 K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D TC41_0718 major facilitator superfamily MFS_1 K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D TC41_3223 major facilitator superfamily MFS_1 K08176 PHO84; MFS transporter, PHS family, inorganic phosphate transporter
D TC41_0882 bcr; drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D TC41_0856 mdtG; major facilitator superfamily MFS_1 K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D TC41_2600 mdtG; major facilitator superfamily MFS_1 K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D TC41_2871 mdtG; major facilitator superfamily MFS_1 K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D TC41_2990 major facilitator superfamily MFS_1 K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D TC41_2905 yitG; major facilitator superfamily MFS_1 K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D TC41_0615 major facilitator superfamily MFS_1 K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D TC41_0281 fsr; major facilitator superfamily MFS_1 K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D TC41_2165 ynfM; major facilitator superfamily MFS_1 K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D TC41_1034 yqgE; major facilitator superfamily MFS_1 K08222 yqgE; MFS transporter, YQGE family, putative transporter
D TC41_0702 yaaU; General substrate transporter K08368 yaaU; MFS transporter, putative metabolite transport protein
D TC41_2197 ydjE; major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D TC41_0574 major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D TC41_0772 ydjE; major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D TC41_2306 pcaK; major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D TC41_0455 major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D TC41_0294 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D TC41_0293 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D TC41_0897 ptsN; putative PTS IIA-like nitrogen-regulatory protein PtsN K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D TC41_0901 fruA; PTS system, fructose subfamily, IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D TC41_0291 mtlA; Protein-N(pi)-phosphohistidine--sugarphosphotran sferase K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D TC41_0288 mtlA; PTS system, mannitol-specific IIC subunit K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D TC41_2760 ammonium transporter K03320 amt; ammonium transporter, Amt family
D TC41_3247 ammonium transporter K03320 amt; ammonium transporter, Amt family
D TC41_0262 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D TC41_0843 formate/nitrite transporter K21993 fdhC; formate transporter
D TC41_0132 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D TC41_2612 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D TC41_3295 mscS; MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D TC41_0536 motA; MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D TC41_0537 motB; OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D TC41_0316 Camphor resistance CrcB protein K06199 crcB; fluoride exporter
D TC41_0317 crcB; Camphor resistance CrcB protein K06199 crcB; fluoride exporter
D TC41_0819 LrgA family protein K06518 cidA; holin-like protein
D TC41_2523 amino acid permease-associated region K11733 lysP; lysine-specific permease
D TC41_2820 amino acid permease-associated region K11735 gabP; GABA permease
D TC41_0441 amino acid permease-associated region K02205 rocE; arginine/ornithine permease
D TC41_1452 yndE; spore germination protein K06296 gerKB; spore germination protein KB
D TC41_2035 spore germination protein K06296 gerKB; spore germination protein KB
D TC41_0569 gerKB; spore germination protein K06296 gerKB; spore germination protein KB
D TC41_1799 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D TC41_1984 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D TC41_1983 small multidrug resistance protein K03297 emrE; small multidrug resistance pump
D TC41_0828 rarD; RarD protein, DMT superfamily transporter K05786 rarD; chloramphenicol-sensitive protein RarD
D TC41_0800 hypothetical protein K03303 lutP; lactate permease
D TC41_2827 L-lactate transport K03303 lutP; lactate permease
D TC41_1968 chaA; calcium/proton antiporter, CaCA family K07300 chaA; Ca2+:H+ antiporter
D TC41_2161 sodium/calcium exchanger membrane region K07301 yrbG; cation:H+ antiporter
D TC41_2066 phosphate transporter K16331 ylnA; sulfate permease
D TC41_2532 Na+/H+ antiporter NhaC-like protein K18218 tet35; tetracycline resistance efflux pump
D TC41_0617 cvrA; sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter
D TC41_2695 cvrA; sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter
D TC41_0670 sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter
D TC41_2313 pyrP; uracil-xanthine permease K02824 uraA; uracil permease
D TC41_0803 nixA; high-affinity nickel-transport protein K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D TC41_0707 mntH; Mn2+/Fe2+ transporter, NRAMP family K03322 mntH; manganese transport protein
D TC41_2102 yjbB; Na/Pi-cotransporter II-related protein K03324 yjbB; phosphate:Na+ symporter
D TC41_2151 Arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D TC41_2326 arsB; Arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D TC41_2222 spoVB; stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D TC41_1455 polysaccharide biosynthesis protein K06409 spoVB; stage V sporulation protein B
D TC41_0668 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D TC41_0227 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D TC41_0062 argO; Lysine exporter protein (LYSE/YGGA) K06895 lysE; L-lysine exporter family protein LysE/ArgO
D TC41_2610 protein of unknown function DUF125 transmembrane K22736 VIT; vacuolar iron transporter family protein
D TC41_1200 ftsW; stage V sporulation protein E K03588 ftsW; cell division protein FtsW
D TC41_1065 rodA; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D TC41_2348 protein of unknown function DUF204 K23242 mntP; manganese efflux pump family protein
D TC41_3106 protein of unknown function DUF204 K23242 mntP; manganese efflux pump family protein
D TC41_0861 iron permease FTR1 K07243 FTR; high-affinity iron transporter
D TC41_2891 ccdA; cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D TC41_2921 ycnJ; copper resistance protein CopC K14166 ycnJ; copper transport protein
C 02044 Secretion system [BR:aad02044]
D TC41_1905 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D TC41_1904 Type II secretion system F domain protein K02455 gspF; general secretion pathway protein F
D TC41_1903 hypothetical protein K02456 gspG; general secretion pathway protein G
D TC41_0425 pilD; peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D TC41_0413 type IV pilin K02650 pilA; type IV pilus assembly protein PilA
D TC41_0409 pilB; type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D TC41_0410 pilC; type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D TC41_0419 Tfp pilus assembly protein ATPase PilM-like protein K02662 pilM; type IV pilus assembly protein PilM
D TC41_0422 pilT; twitching motility protein K02669 pilT; twitching motility protein PilT
D TC41_0414 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV
D TC41_2388 cpaF; type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D TC41_1718 cpaF; type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D TC41_2387 hypothetical protein K12510 tadB; tight adherence protein B
D TC41_1223 protein of unknown function YGGT K02221 yggT; YggT family protein
D TC41_2125 comEA; competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA
D TC41_0259 comEB; CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D TC41_2124 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC
D TC41_0712 comER; NADP oxidoreductase coenzyme F420-dependent K02239 comER; competence protein ComER
D TC41_0125 Late competence development protein ComFB K02241 comFB; competence protein ComFB
D TC41_1347 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D TC41_1346 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D TC41_1301 flagellar biosynthesis protein K04061 flhB2; flagellar biosynthesis protein
D TC41_1325 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D TC41_1327 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH
D TC41_1328 fliI; ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D TC41_1340 fliNY; CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN
D TC41_1342 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D TC41_1343 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D TC41_1344 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D TC41_1345 fliR; type III secretion system inner membrane R protein K02421 fliR; flagellar biosynthesis protein FliR
D TC41_2846 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TC41_2220 secDF; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D TC41_3056 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D TC41_2219 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D TC41_0717 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D TC41_3020 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D TC41_1279 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D TC41_1277 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TC41_2226 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D TC41_3307 yidC; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TC41_0399 sec-independent translocation protein mttA K03116 tatA; sec-independent protein translocase protein TatA
D TC41_0398 tatC; Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:aad02042]
D TC41_1922 plcC; phosphoesterase K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:aad02022]
D TC41_2862 phoR; PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TC41_0060 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TC41_2863 phoB; two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D TC41_0328 kdpD; sensor kinase subunit kdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D TC41_0332 kdpD; Osmosensitive K channel His kinase sensor K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D TC41_0327 kdpE; two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D TC41_1626 resE; PAS/PAC sensor signal transduction histidine kinase K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D TC41_1627 resD; two component transcriptional regulator, winged helix family K07775 resD; two-component system, OmpR family, response regulator ResD
D TC41_3283 vicK; PAS/PAC sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D TC41_3284 vicR; two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR
D TC41_2541 baeS; histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D TC41_2543 qseC; integral membrane sensor signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D TC41_2544 two component transcriptional regulator, winged helix family K18941 arlR; two-component system, OmpR family, response regulator ArlR
D TC41_0642 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D TC41_0641 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D TC41_0667 putative two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D TC41_0622 desK; histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D TC41_0623 two component transcriptional regulator, LuxR family K07693 desR; two-component system, NarL family, response regulator DesR
D TC41_0511 liaS; PAS/PAC sensor signal transduction histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D TC41_0512 nreC; two component transcriptional regulator, LuxR family K07696 nreC; two-component system, NarL family, response regulator NreC
D TC41_2075 kinA; PAS/PAC sensor signal transduction histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D TC41_0081 PAS/PAC sensor signal transduction histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D TC41_3123 spo0F; response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D TC41_1667 spo0A; sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D TC41_0146 cheA; CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TC41_1351 cheA; CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TC41_0143 cheY; response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TC41_1341 cheY; response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TC41_1350 cheB; CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TC41_2547 yesM; hypothetical protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D TC41_0788 yesN; two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D TC41_2552 response regulator receiver protein K07720 yesN; two-component system, response regulator YesN
D TC41_0884 transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
C 02035 Bacterial motility proteins [BR:aad02035]
D TC41_0146 cheA; CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TC41_1351 cheA; CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TC41_0147 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D TC41_1352 cheW; CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D TC41_0144 CheC domain protein K03409 cheX; chemotaxis protein CheX
D TC41_1353 cheC; CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D TC41_1354 cheD; CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D TC41_1585 cheR; MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D TC41_1350 cheB; CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TC41_0143 cheY; response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TC41_1341 cheY; response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TC41_0142 mcp; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TC41_0148 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TC41_2587 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TC41_2705 mcp; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TC41_2258 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TC41_0145 hemAT; methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TC41_1327 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH
D TC41_1328 fliI; ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D TC41_1342 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D TC41_1343 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D TC41_1344 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D TC41_1345 fliR; type III secretion system inner membrane R protein K02421 fliR; flagellar biosynthesis protein FliR
D TC41_1347 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D TC41_1346 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D TC41_1326 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D TC41_1339 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D TC41_1340 fliNY; CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN
D TC41_1325 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D TC41_1338 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D TC41_1324 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D TC41_1331 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D TC41_1322 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D TC41_1323 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D TC41_1333 flgD; flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D TC41_3081 flgG; flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG
D TC41_1335 flgE; protein of unknown function DUF1078 domain protein K02390 flgE; flagellar hook protein FlgE
D TC41_3082 flagellar basal body rod protein K02390 flgE; flagellar hook protein FlgE
D TC41_2856 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D TC41_2855 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D TC41_2854 fliC; flagellin domain protein K02406 fliC; flagellin
D TC41_2853 fliD; flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D TC41_2859 putative RNA polymerase, sigma 28 subunit, FliA/WhiG family K02405 fliA; RNA polymerase sigma factor FliA
D TC41_0536 motA; MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D TC41_0537 motB; OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D TC41_1337 flagellar FlbD family protein K02385 flbD; flagellar protein FlbD
D TC41_1348 flhF; flagellar biosynthetic protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D TC41_1720 Cobyrinic acid ac-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG
D TC41_1349 flhG; ATPase involved in chromosome partitioning-like protein K04562 flhG; flagellar biosynthesis protein FlhG
D TC41_0422 pilT; twitching motility protein K02669 pilT; twitching motility protein PilT
D TC41_0413 type IV pilin K02650 pilA; type IV pilus assembly protein PilA
D TC41_0409 pilB; type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D TC41_0410 pilC; type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D TC41_0425 pilD; peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D TC41_0419 Tfp pilus assembly protein ATPase PilM-like protein K02662 pilM; type IV pilus assembly protein PilM
D TC41_0414 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV
D TC41_2388 cpaF; type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D TC41_1718 cpaF; type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:aad04812]
D TC41_3083 mreB; cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D TC41_1919 mreB; cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D TC41_1723 hypothetical protein K18640 parM; plasmid segregation protein ParM
D TC41_1213 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D TC41_1212 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D TC41_1916 minC; Septum formation inhibitor MinC K03610 minC; septum site-determining protein MinC
D TC41_1915 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D TC41_3301 parA; Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D TC41_2429 hypothetical protein K03496 parA; chromosome partitioning protein
D TC41_1769 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_1778 transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_2438 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_2444 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_3300 parB; parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_3302 parB; parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_1768 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TC41_2432 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:aad04147]
D TC41_0716 eno; Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TC41_2560 gapA; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TC41_0713 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D TC41_2636 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TC41_1417 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D TC41_2369 ahpC; Peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D TC41_0505 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TC41_2109 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TC41_0105 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TC41_0014 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D TC41_3043 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D TC41_1030 hit; histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D TC41_0182 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TC41_2155 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TC41_1491 fadD; AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TC41_0393 fadD; AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TC41_2178 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TC41_0485 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D TC41_3019 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D TC41_2216 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D TC41_1139 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D TC41_1138 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D TC41_2606 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D TC41_0072 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D TC41_1524 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TC41_2759 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TC41_1465 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TC41_1934 hemB; Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D TC41_2334 phhB; transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D TC41_1144 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TC41_0527 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D TC41_0585 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TC41_1484 fixB; Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D TC41_2843 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D TC41_0714 tpiA; Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:aad02048]
D TC41_2954 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D TC41_2953 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D TC41_2952 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D TC41_2955 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D TC41_3235 hypothetical protein K19131 csb1; CRISPR-associated protein Csb1
D TC41_2950 CRISPR-associated protein, GSU0053 family K19131 csb1; CRISPR-associated protein Csb1
D TC41_2949 conserved hypothetical protein K19132 csb2; CRISPR-associated protein Csb2
D TC41_3234 hypothetical protein K19132 csb2; CRISPR-associated protein Csb2
D TC41_2939 hypothetical protein K19132 csb2; CRISPR-associated protein Csb2
D TC41_2951 hypothetical protein K19136 csx17; CRISPR-associated protein Csx17
D TC41_2579 CRISPR-associated RAMP protein, Cmr1 family K07061 cmr1; CRISPR-associated protein Cmr1
D TC41_2578 CRISPR-associated protein, Crm2 family K19076 cmr2; CRISPR-associated protein Cmr2
D TC41_2577 CRISPR-associated protein, Cmr3 K09127 cmr3; CRISPR-associated protein Cmr3
D TC41_2576 CRISPR-associated RAMP protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4
D TC41_2575 CRISPR-associated protein, Cmr5 family K19141 cmr5; CRISPR-associated protein Cmr5
D TC41_2574 CRISPR-associated RAMP protein, Cmr6 family K19142 cmr6; CRISPR-associated protein Cmr6
D TC41_1788 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TC41_2457 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TC41_2963 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TC41_1764 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TC41_2442 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D TC41_0484 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D TC41_0483 ydcD; putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D TC41_1213 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D TC41_3083 mreB; cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D TC41_1919 mreB; cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D TC41_0875 gluQ; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TC41_1184 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TC41_2144 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:aad04090]
C 01504 Antimicrobial resistance genes [BR:aad01504]
D TC41_3175 aminoglycoside phosphotransferase K17910 aphD; aminoglycoside 2''-phosphotransferase [EC:2.7.1.190]
D TC41_2532 Na+/H+ antiporter NhaC-like protein K18218 tet35; tetracycline resistance efflux pump
D TC41_2990 major facilitator superfamily MFS_1 K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:aad00537]
D TC41_1417 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:aad03100]
D TC41_T051 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TC41_T025 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TC41_T015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TC41_T059 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TC41_T029 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TC41_T017 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TC41_T023 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TC41_T001 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TC41_T040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TC41_T026 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D TC41_T014 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D TC41_T060 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D TC41_T006 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D TC41_T003 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D TC41_T048 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D TC41_T058 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TC41_T044 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TC41_T061 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TC41_T008 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TC41_T043 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TC41_T012 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TC41_T021 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TC41_T049 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TC41_T011 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TC41_T041 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TC41_T054 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TC41_T010 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TC41_T057 tRNA-His K14226 tRNA-His; tRNA His
D TC41_T028 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D TC41_T005 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D TC41_T045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TC41_T053 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TC41_T047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TC41_T024 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TC41_T038 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TC41_T019 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TC41_T042 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TC41_T055 tRNA-Met K14230 tRNA-Met; tRNA Met
D TC41_T002 tRNA-Met K14230 tRNA-Met; tRNA Met
D TC41_T062 tRNA-Met K14230 tRNA-Met; tRNA Met
D TC41_T031 tRNA-Met K14230 tRNA-Met; tRNA Met
D TC41_T050 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D TC41_T063 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D TC41_T016 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TC41_T037 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TC41_T020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TC41_T004 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TC41_T007 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TC41_T022 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TC41_T030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TC41_T035 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TC41_T013 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TC41_T039 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TC41_T033 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TC41_T018 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TC41_T032 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TC41_T052 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TC41_T034 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D TC41_T056 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D TC41_T027 tRNA-Val K14237 tRNA-Val; tRNA Val
D TC41_T009 tRNA-Val K14237 tRNA-Val; tRNA Val
D TC41_T046 tRNA-Val K14237 tRNA-Val; tRNA Val
D TC41_T036 tRNA-Val K14237 tRNA-Val; tRNA Val
D TC41_R013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TC41_R001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TC41_R018 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TC41_R004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TC41_R007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TC41_R010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TC41_R005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TC41_R008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TC41_R014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TC41_R017 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TC41_R002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TC41_R011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TC41_R003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TC41_R015 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TC41_R012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TC41_R016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TC41_R006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TC41_R009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D TC41_2734 hopanoid-associated sugar epimerase K00091 E1.1.1.219; dihydroflavonol-4-reductase [EC:1.1.1.219]
D TC41_0057 organophosphate reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D TC41_2190 aldo/keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D TC41_0920 iron-containing alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D TC41_0758 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D TC41_0056 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D TC41_2688 fadH; NADH:flavin oxidoreductase/NADH oxidase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D TC41_3136 qor; Alcohol dehydrogenase zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D TC41_0944 zinc-binding alcohol dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D TC41_3201 Alcohol dehydrogenase zinc-binding domain protein K00359 qorA; NADPH:quinone reductase [EC:1.6.5.5]
D TC41_2077 NADH:flavin oxidoreductase/NADH oxidase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D TC41_2815 ahpF; alkyl hydroperoxide reductase, F subunit K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D TC41_1204 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D TC41_0868 msrA; peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D TC41_2567 msrB; methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D TC41_1076 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D TC41_2816 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D TC41_3219 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D TC41_1678 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D TC41_2150 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D TC41_3274 dltE; short-chain dehydrogenase/reductase SDR K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D TC41_0434 glycosidase K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D TC41_1551 glycosyl transferase group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D TC41_0791 hypothetical protein K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D TC41_2062 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D TC41_2886 apbE; ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D TC41_2896 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D TC41_1500 protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D TC41_3068 disA; DNA integrity scanning, DisA, linker region K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D TC41_3001 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D TC41_1644 spoIIAB; putative anti-sigma regulatory factor, serine/threonine protein kinase K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D TC41_0540 hprK; HPr kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D TC41_3071 ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D TC41_0452 Carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D TC41_0590 Carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D TC41_0811 hypothetical protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D TC41_0050 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D TC41_2309 ybgC; thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D TC41_2699 ybgC; thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D TC41_1830 ybgC; 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D TC41_0260 spoIIE; stage II sporulation protein E, protein serine/threonine phosphatase K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D TC41_2134 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D TC41_2096 7TM receptor with intracellular metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D TC41_0169 tatD; hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D TC41_0170 rnmV; primase/topoisomerase like protein K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D TC41_2609 Endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D TC41_0077 Alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139]
D TC41_3242 yicI; glycoside hydrolase family 31 K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D TC41_2203 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D TC41_1248 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D TC41_0333 putative oligosaccharide N-glucosamin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D TC41_1302 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D TC41_1381 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D TC41_2010 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D TC41_0964 LmbE family protein K22135 bshB2; N-acetylglucosamine malate deacetylase 2 [EC:3.5.1.-]
D TC41_0889 LmbE family protein K22135 bshB2; N-acetylglucosamine malate deacetylase 2 [EC:3.5.1.-]
D TC41_0514 moxR; ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D TC41_2268 moxR; ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D TC41_3105 protein tyrosine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D TC41_0480 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D TC41_0976 putative cytoplasmic protein K16188 ytpB; tetraprenyl-beta-curcumene synthase [EC:4.2.3.130]
D TC41_0789 protein of unknown function DUF224 cysteine-rich region domain protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D TC41_0792 protein of unknown function DUF111 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D TC41_0799 hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D TC41_0240 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D TC41_1243 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
C 99981 Carbohydrate metabolism
D TC41_0549 chr; Phosphotransferase system, phosphocarrier protein HPr K11184 chr; catabolite repression HPr-like protein
D TC41_2260 Phosphotransferase system, phosphocarrier protein HPr K11184 chr; catabolite repression HPr-like protein
D TC41_0687 protein of unknown function DUF224 cysteine-rich region domain protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D TC41_0686 iron-sulfur cluster binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D TC41_0685 ykgG; protein of unknown function DUF162 K00782 lldG; L-lactate dehydrogenase complex protein LldG
D TC41_1191 hypothetical protein K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D TC41_2022 fdhD; formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D TC41_1002 iscU; SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
D TC41_1578 ATPase associated with various cellular activities AAA_5 K04748 norQ; nitric oxide reductase NorQ protein
D TC41_1485 fixA; Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D TC41_1222 alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D TC41_0735 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D TC41_1311 cwlJ; cell wall hydrolase SleB K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D TC41_0191 ABC-1 domain protein K03688 ubiB; ubiquinone biosynthesis protein
D TC41_2880 ubiB; ABC-1 domain protein K03688 ubiB; ubiquinone biosynthesis protein
D TC41_0503 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
D TC41_2206 protein of unknown function DUF1094 K26958 brxA_B; bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D TC41_2322 cspA; cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
C 99974 Translation
D TC41_0256 RNA binding S1 domain protein K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D TC41_3072 UvrB/UvrC protein K19411 mcsA; protein arginine kinase activator
D TC41_1944 tig; trigger factor K03545 tig; trigger factor
D TC41_2887 hypothetical protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D TC41_0721 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D TC41_1303 comM; magnesium chelatase ChlI subunit K07391 comM; magnesium chelatase family protein
D TC41_1029 yhfA; OsmC family protein K07397 yhfA; putative redox protein
D TC41_1610 Negative regulator of genetic competence K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D TC41_1155 protein of unknown function DUF1156 K07445 K07445; putative DNA methylase
D TC41_2957 Resolvase domain protein K07450 K07450; putative resolvase
D TC41_0040 Resolvase domain protein K07450 K07450; putative resolvase
D TC41_0424 Resolvase domain protein K07450 K07450; putative resolvase
D TC41_0646 Resolvase domain protein K07450 K07450; putative resolvase
D TC41_0851 Resolvase domain protein K07450 K07450; putative resolvase
D TC41_0860 Resolvase domain protein K07450 K07450; putative resolvase
D TC41_0662 Resolvase domain protein K07450 K07450; putative resolvase
D TC41_3225 Resolvase domain protein K07450 K07450; putative resolvase
D TC41_1920 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D TC41_0815 rmuC; protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC
D TC41_1308 smf; DNA protecting protein DprA K04096 smf; DNA processing protein
D TC41_1533 dnaD; primosome, DnaD subunit K02086 dnaD; DNA replication protein
D TC41_0471 yusF; TOPRIM domain protein K07476 yusF; toprim domain protein
D TC41_2146 ycaJ; AAA ATPase central domain protein K07478 ycaJ; putative ATPase
D TC41_2499 ATPase-like protein K06919 K06919; putative DNA primase/helicase
D TC41_1880 phage/plasmid primase, P4 family K06919 K06919; putative DNA primase/helicase
D TC41_1806 transposase IS3/IS911 family protein K07483 K07483; transposase
D TC41_1044 transposase IS3/IS911 family protein K07483 K07483; transposase
D TC41_1099 transposase IS3/IS911 family protein K07483 K07483; transposase
D TC41_1103 transposase IS3/IS911 family protein K07483 K07483; transposase
D TC41_1116 transposase IS3/IS911 family protein K07483 K07483; transposase
D TC41_1440 transposase IS3/IS911 family protein K07483 K07483; transposase
D TC41_1216 transposase IS3/IS911 family protein K07483 K07483; transposase
D TC41_1836 transposase IS3/IS911 family protein K07483 K07483; transposase
D TC41_1838 transposase IS3/IS911 family protein K07483 K07483; transposase
D TC41_1048 transposase IS66 K07484 K07484; transposase
D TC41_1049 IS66 Orf2 family protein K07484 K07484; transposase
D TC41_1113 IS66 Orf2 family protein K07484 K07484; transposase
D TC41_1114 transposase IS66 K07484 K07484; transposase
D TC41_2979 transposase K07484 K07484; transposase
D TC41_2981 IS66 Orf2 family protein K07484 K07484; transposase
D TC41_2985 IS66 Orf2 family protein K07484 K07484; transposase
D TC41_0022 hypothetical protein K07484 K07484; transposase
D TC41_2986 transposase IS66 K07484 K07484; transposase
D TC41_2993 IS66 Orf2 family protein K07484 K07484; transposase
D TC41_2994 transposase IS66 K07484 K07484; transposase
D TC41_0373 IS66 Orf2 family protein K07484 K07484; transposase
D TC41_0374 transposase IS66 K07484 K07484; transposase
D TC41_0150 transposase IS66 K07484 K07484; transposase
D TC41_0151 transposase IS66 K07484 K07484; transposase
D TC41_1815 IS66 Orf2 family protein K07484 K07484; transposase
D TC41_1816 transposase IS66 K07484 K07484; transposase
D TC41_1818 transposase K07484 K07484; transposase
D TC41_1819 IS66 Orf2 family protein K07484 K07484; transposase
D TC41_0152 IS66 Orf2 family protein K07484 K07484; transposase
D TC41_1843 transposase K07484 K07484; transposase
D TC41_1844 IS66 Orf2 family protein K07484 K07484; transposase
D TC41_1214 transposase mutator type K07493 K07493; putative transposase
D TC41_0224 transposase mutator type K07493 K07493; putative transposase
D TC41_2988 transposase mutator type K07493 K07493; putative transposase
D TC41_2995 transposase mutator type K07493 K07493; putative transposase
D TC41_1898 transposase mutator type K07493 K07493; putative transposase
D TC41_0645 transposase, IS605 OrfB family K07496 K07496; putative transposase
D TC41_0853 transposase, IS605 OrfB family K07496 K07496; putative transposase
D TC41_0859 transposase, IS605 OrfB family K07496 K07496; putative transposase
D TC41_0663 transposase, IS605 OrfB family K07496 K07496; putative transposase
D TC41_3226 transposase, IS605 OrfB family K07496 K07496; putative transposase
D TC41_2148 transposase, IS605 OrfB family K07496 K07496; putative transposase
D TC41_0300 transposase, IS605 OrfB family K07496 K07496; putative transposase
D TC41_2958 transposase, IS605 OrfB family K07496 K07496; putative transposase
D TC41_0039 transposase, IS605 OrfB family K07496 K07496; putative transposase
D TC41_2414 transposase, IS605 OrfB family K07496 K07496; putative transposase
D TC41_0423 transposase, IS605 OrfB family K07496 K07496; putative transposase
D TC41_1115 hypothetical protein K07497 K07497; putative transposase
D TC41_1045 transposase K07497 K07497; putative transposase
D TC41_1215 transposase K07497 K07497; putative transposase
D TC41_1100 transposase K07497 K07497; putative transposase
D TC41_1102 transposase K07497 K07497; putative transposase
D TC41_1111 hypothetical protein K07497 K07497; putative transposase
D TC41_1441 hypothetical protein K07497 K07497; putative transposase
D TC41_1442 transposase K07497 K07497; putative transposase
D TC41_1443 Integrase catalytic region K07497 K07497; putative transposase
D TC41_1807 transposase K07497 K07497; putative transposase
D TC41_1837 transposase K07497 K07497; putative transposase
D TC41_1839 transposase K07497 K07497; putative transposase
D TC41_1043 transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D TC41_0130 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D TC41_2189 major facilitator superfamily MFS_1 K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D TC41_1810 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D TC41_0608 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D TC41_2923 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D TC41_0070 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D TC41_0079 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D TC41_2329 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family
D TC41_2961 permease for cytosine/purines uracil thiamine allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
C 99978 Cell growth
D TC41_1418 cotE; Spore coat protein E K06328 cotE; spore coat protein E
D TC41_2290 cotJA protein K06332 cotJA; spore coat protein JA
D TC41_2289 cotJB; hypothetical protein K06333 cotJB; spore coat protein JB
D TC41_2288 cotJC; Catalase K06334 cotJC; spore coat protein JC
D TC41_3306 jag; single-stranded nucleic acid binding R3H domain protein K06346 jag; spoIIIJ-associated protein
D TC41_3129 kipA; urea amidolyase related protein K06350 kipA; antagonist of KipI
D TC41_3130 kipI; Allophanate hydrolase subunit 1 K06351 kipI; inhibitor of KinA
D TC41_1631 spmA; nucleoside recognition domain protein K06373 spmA; spore maturation protein A
D TC41_1630 spmB; nucleoside recognition domain protein K06374 spmB; spore maturation protein B
D TC41_1645 spoIIAA; anti-sigma-factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D TC41_1650 spoIIM; protein of unknown function DUF95 transmembrane K06384 spoIIM; stage II sporulation protein M
D TC41_3085 spoIIQ; Peptidase M23 K06386 spoIIQ; stage II sporulation protein Q
D TC41_3114 spoIIR; stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D TC41_1695 spoIIIAA; stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA
D TC41_1694 Sporulation stage III protein AB K06391 spoIIIAB; stage III sporulation protein AB
D TC41_1693 stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D TC41_1692 spoIIIAD; stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD
D TC41_1691 spoIIIAE; stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE
D TC41_1690 hypothetical protein K06395 spoIIIAF; stage III sporulation protein AF
D TC41_1689 hypothetical protein K06396 spoIIIAG; stage III sporulation protein AG
D TC41_1688 hypothetical protein K06397 spoIIIAH; stage III sporulation protein AH
D TC41_1593 spoIVA; stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D TC41_0984 spoIVCA; Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase
D TC41_1206 spoIVCA; Resolvase domain protein K06400 spoIVCA; site-specific DNA recombinase
D TC41_2520 Recombinase K06400 spoIVCA; site-specific DNA recombinase
D TC41_0691 spoVAC; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D TC41_1642 spoVAC; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D TC41_0692 spoVAD; stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D TC41_1641 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D TC41_0693 stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D TC41_1639 hypothetical protein K06407 spoVAE; stage V sporulation protein AE
D TC41_1640 spoVAE; stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D TC41_1453 spoVAF; GerA spore germination protein K06408 spoVAF; stage V sporulation protein AF
D TC41_1384 spoVFA; dipicolinic acid synthetase, A subunit K06410 spoVFA; dipicolinate synthase subunit A
D TC41_1385 spoVFB; dipicolinic acid synthetase, B subunit K06411 spoVFB; dipicolinate synthase subunit B
D TC41_0244 spoVG; SpoVG family protein K06412 spoVG; stage V sporulation protein G
D TC41_1458 spoVK; AAA ATPase central domain protein K06413 spoVK; stage V sporulation protein K
D TC41_0593 spoVR; SpoVR family protein K06415 spoVR; stage V sporulation protein R
D TC41_1416 spoVS; Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D TC41_2060 sspB; small acid-soluble spore protein alpha/beta type K06419 SASP-B; small acid-soluble spore protein B (major beta-type SASP)
D TC41_1259 sspB; small acid-soluble spore protein alpha/beta type K06419 SASP-B; small acid-soluble spore protein B (major beta-type SASP)
D TC41_0238 sspF; hypothetical protein K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP)
D TC41_1095 small acid-soluble spore protein, H-type K06425 sspH; small acid-soluble spore protein H (minor)
D TC41_2680 small, acid-soluble spore protein tlp K06434 tlp; small acid-soluble spore protein (thioredoxin-like protein)
D TC41_0235 yabG; sporulation peptidase YabG K06436 yabG; spore coat assemly protein
D TC41_2098 yqfD; sporulation protein YqfD K06438 yqfD; similar to stage IV sporulation protein
D TC41_3004 gerD; hypothetical protein K06294 gerD; spore germination protein D
D TC41_0568 GerA spore germination protein K06295 gerKA; spore germination protein KA
D TC41_2037 hypothetical protein K06297 gerKC; spore germination protein KC
D TC41_2072 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC
D TC41_1450 hypothetical protein K06297 gerKC; spore germination protein KC
D TC41_1189 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC
D TC41_2728 yfkQ; GerA spore germination protein K06307 yfkQ; spore germination protein
D TC41_2727 yfkR; germination protein, Ger(x)C family K06308 yfkR; spore germination protein
D TC41_2725 yfkT; spore germination protein K06309 yfkT; spore germination protein
D TC41_2071 GerA spore germination protein K06310 yndD; spore germination protein
D TC41_1606 hypothetical protein K06313 ypeB; spore germination protein
C 99993 Cell motility
C 99995 Signaling proteins
D TC41_1369 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D TC41_2097 phoH; PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D TC41_0591 prkA; putative serine protein kinase, PrkA K07180 prkA; serine protein kinase
D TC41_2758 protein of unknown function DUF294 nucleotidyltransferase putative K07182 K07182; CBS domain-containing protein
D TC41_1409 protein of unknown function DUF520 K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D TC41_0384 secretion protein hlyd, putative K02005 ABC.CD.TX; HlyD family secretion protein
D TC41_0379 secretion protein hlyd, putative K02005 ABC.CD.TX; HlyD family secretion protein
D TC41_1937 cytochrome c assembly protein K02497 hemX; HemX protein
C 99994 Others
D TC41_2004 phoU; phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D TC41_2366 transcriptional regulator of molybdate metabolism, XRE family K07219 K07219; putative molybdopterin biosynthesis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D TC41_0562 DEAD/DEAH box helicase domain protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D TC41_0426 DEAD/DEAH box helicase domain protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D TC41_1528 export-related chaperone CsaA K06878 K06878; tRNA-binding protein
D TC41_2657 glbN; globin K06886 glbN; hemoglobin
D TC41_0464 MMPL domain protein K06994 K06994; putative drug exporter of the RND superfamily
D TC41_0112 MMPL domain protein K06994 K06994; putative drug exporter of the RND superfamily
D TC41_1266 Patatin K07001 K07001; NTE family protein
D TC41_1586 Patatin K07001 K07001; NTE family protein
D TC41_1003 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D TC41_1000 sufD; SufBD protein K09015 sufD; Fe-S cluster assembly protein SufD
D TC41_2416 membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein
D TC41_1749 membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein
D TC41_0974 ribonuclease BN K07058 K07058; membrane protein
D TC41_0102 yhgE; YhgE/Pip C-terminal domain protein K01421 yhgE; putative membrane protein
D TC41_2247 membrane protein of unknown function K08972 K08972; putative membrane protein
D TC41_0478 membrane protein of unknown function K08972 K08972; putative membrane protein
D TC41_0638 conserved hypothetical protein K08976 K08976; putative membrane protein
C 99997 Function unknown
D TC41_1079 metal dependent phosphohydrolase K06885 K06885; uncharacterized protein
D TC41_2025 protein of unknown function DUF255 K06888 K06888; uncharacterized protein
D TC41_2876 dienelactone hydrolase K06889 K06889; uncharacterized protein
D TC41_0659 hypothetical protein K06889 K06889; uncharacterized protein
D TC41_3148 hypothetical protein K06889 K06889; uncharacterized protein
D TC41_0554 protein of unknown function UPF0005 K06890 K06890; uncharacterized protein
D TC41_1281 RNA-binding protein (contains KH domain)-like protein K06960 K06960; uncharacterized protein
D TC41_3059 protein of unknown function DUF901 K06962 K06962; uncharacterized protein
D TC41_2607 GCN5-related N-acetyltransferase K06975 K06975; uncharacterized protein
D TC41_0009 GCN5-related N-acetyltransferase K06976 K06976; uncharacterized protein
D TC41_2724 Glyoxalase/bleomycin resistance protein/dioxygenase K06991 K06991; uncharacterized protein
D TC41_1951 hypothetical protein K07034 K07034; uncharacterized protein
D TC41_1176 GPR1/FUN34/yaaH family protein K07034 K07034; uncharacterized protein
D TC41_2786 domain of unknown function DUF1731 K07071 K07071; uncharacterized protein
D TC41_2463 hypothetical protein K07075 K07075; uncharacterized protein
D TC41_3270 nitroreductase K07078 K07078; uncharacterized protein
D TC41_2942 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D TC41_2948 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D TC41_2211 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D TC41_2307 metallophosphoesterase K07098 K07098; uncharacterized protein
D TC41_1616 metallophosphoesterase K07099 K07099; uncharacterized protein
D TC41_2623 3H domain protein K07105 K07105; uncharacterized protein
D TC41_2297 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein
D TC41_0092 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein
D TC41_3299 protein of unknown function DUF554 K07150 K07150; uncharacterized protein
D TC41_3308 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D TC41_2100 conserved hypothetical protein K09117 K09117; uncharacterized protein
D TC41_0874 Protein of unknown function DUF2071 K09166 K09166; uncharacterized protein
D TC41_0887 protein of unknown function DUF985 K09705 K09705; uncharacterized protein
D TC41_2074 protein of unknown function DUF1284 K09706 K09706; uncharacterized protein
D TC41_2291 tRNA/rRNA methyltransferase (SpoU) K09775 K09775; uncharacterized protein
D TC41_1083 acid phosphatase/vanadium-dependent haloperoxidase related protein K09775 K09775; uncharacterized protein
D TC41_0233 protein of unknown function DUF458 K09776 K09776; uncharacterized protein
D TC41_0703 protein of unknown function DUF378 K09779 K09779; uncharacterized protein
D TC41_0592 sporulation protein YhbH K09786 K09786; uncharacterized protein
D TC41_1278 putative helix-turn-helix protein YlxM/p13 family protein K09787 K09787; uncharacterized protein
D TC41_3269 protein of unknown function DUF1680 K09955 K09955; uncharacterized protein
D TC41_0742 urea carboxylase-associated protein 2 K09967 K09967; uncharacterized protein
D TC41_0743 urea carboxylase-associated protein 1 K09967 K09967; uncharacterized protein
D TC41_0563 exonuclease-like protein K07502 yprB; uncharacterized protein
D TC41_1911 protein of unknown function DUF464 K07584 ysxB; uncharacterized protein
D TC41_0071 putative phosphate transport regulator K07220 K07220; uncharacterized protein
D TC41_2924 protein of unknown function DUF47 K07220 K07220; uncharacterized protein
D TC41_0560 protein of unknown function DUF402 K07586 ygaC; uncharacterized protein
D TC41_1372 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 4, 2024