+E Ribosome biogenesis KO
#
Ribosome Biogenesis - Alternaria alternata
%
!
AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
D CC77DRAFT_643685 Fibrillarin K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
D CC77DRAFT_1047308 nucleolar protein 5A K14564 NOP56; nucleolar protein 56
D CC77DRAFT_1016547 nucleolar protein 5A K14565 NOP58; nucleolar protein 58
D CC77DRAFT_941527 L30e-like protein K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13
C Box H/ACA snoRNPs
D CC77DRAFT_964482 putative rRNA pseudouridine synthase K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D CC77DRAFT_1016598 Gar1-domain-containing protein K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1
D CC77DRAFT_1018088 L30e-like protein K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2
D CC77DRAFT_1018821 H/ACA ribonucleo protein-like protein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D CC77DRAFT_500766 NAF1-domain-containing protein K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1
B 90S particles
C U3 small nucleolar RNA-associated proteins
D CC77DRAFT_1026742 hypothetical protein K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3
D CC77DRAFT_1019257 U3 small nucleolar ribonucleoprotein IMP4 K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4
D CC77DRAFT_1025531 Mpp10 protein K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10
D CC77DRAFT_1023515 hypothetical protein K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5
D CC77DRAFT_946874 hypothetical protein K14545 RRP7; ribosomal RNA-processing protein 7
D CC77DRAFT_1029840 WD40 repeat-like protein K14558 PWP2; periodic tryptophan protein 2
D CC77DRAFT_1024451 nucleolar protein 14 K14766 NOP14; nucleolar protein 14
D CC77DRAFT_1067808 hypothetical protein K14767 UTP3; U3 small nucleolar RNA-associated protein 3
D CC77DRAFT_953619 WD40 repeat-like protein K14548 UTP4; U3 small nucleolar RNA-associated protein 4
D CC77DRAFT_925979 NUC189-domain-containing protein K14546 UTP5; U3 small nucleolar RNA-associated protein 5
D CC77DRAFT_1057601 hepatocellular carcinoma-associated antigen 66 K14557 UTP6; U3 small nucleolar RNA-associated protein 6
D CC77DRAFT_1016101 U3 snoRNP-associated protein Utp7 K14768 UTP7; U3 small nucleolar RNA-associated protein 7
D CC77DRAFT_1016946 hypothetical protein K14550 UTP10; U3 small nucleolar RNA-associated protein 10
D CC77DRAFT_465768 U3 small nucleolar RNA-associated protein 11 K14769 UTP11; U3 small nucleolar RNA-associated protein 11
D CC77DRAFT_819374 WD40 repeat-like protein K14556 DIP2; U3 small nucleolar RNA-associated protein 12
D CC77DRAFT_1002385 WD40 repeat-like protein K14555 UTP13; U3 small nucleolar RNA-associated protein 13
D CC77DRAFT_1020255 Utp14-domain-containing protein K14567 UTP14; U3 small nucleolar RNA-associated protein 14
D CC77DRAFT_1038627 WD40 repeat-like protein K14549 UTP15; U3 small nucleolar RNA-associated protein 15
D CC77DRAFT_1091814 WD40 repeat-like protein K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
D CC77DRAFT_1097948 WD40 repeat-like protein K14553 UTP18; U3 small nucleolar RNA-associated protein 18
D CC77DRAFT_1098728 CBF-domain-containing protein K14771 NOC4; U3 small nucleolar RNA-associated protein 19
D CC77DRAFT_494802 hypothetical protein K14772 UTP20; U3 small nucleolar RNA-associated protein 20
D CC77DRAFT_1091785 Utp21-domain-containing protein K14554 UTP21; U3 small nucleolar RNA-associated protein 21
D CC77DRAFT_1016669 Nrap protein K14544 UTP22; U3 small nucleolar RNA-associated protein 22
D CC77DRAFT_1039859 hypothetical protein K14773 UTP23; U3 small nucleolar RNA-associated protein 23
D CC77DRAFT_868309 Fcf1-domain-containing protein K14566 UTP24; U3 small nucleolar RNA-associated protein 24
D CC77DRAFT_1035501 U3 small nucleolar RNA-associated protein 25 K14774 UTP25; U3 small nucleolar RNA-associated protein 25
D CC77DRAFT_965337 ribosomal L1 domain-containing 1 K14775 UTP30; ribosome biogenesis protein UTP30
C Helicases
D CC77DRAFT_959898 DEAD-domain-containing protein K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7]
D CC77DRAFT_1016543 ATP-dependent RNA helicase HAS1 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D CC77DRAFT_944846 DEAD-domain-containing protein K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7]
D CC77DRAFT_1029358 DEAD-domain-containing protein K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7]
D CC77DRAFT_1025366 P-loop containing nucleoside triphosphate hydrolase protein K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7]
D CC77DRAFT_960229 pre-mRNA splicing factor ATP-dependent RNA helicase PRP16 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D CC77DRAFT_1072236 P-loop containing nucleoside triphosphate hydrolase protein K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6]
D CC77DRAFT_1016697 P-loop containing nucleoside triphosphate hydrolase protein K14781 DHR2; ATP-dependent RNA helicase DHR2 [EC:5.6.2.6]
D CC77DRAFT_1018631 ATP-dependent RNA helicase fal1 K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
C GTPase
D CC77DRAFT_1095693 DUF663-domain-containing protein K14569 BMS1; ribosome biogenesis protein BMS1
C RNase
D CC77DRAFT_936975 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CC77DRAFT_1064506 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CC77DRAFT_1022661 RNA exonuclease 4 K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-]
D CC77DRAFT_1060047 lariat debranching enzyme K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-]
C Kinase
D CC77DRAFT_1019669 casein kinase II subunit alpha K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1]
D CC77DRAFT_789077 hypothetical protein K03115 CSNK2B; casein kinase II subunit beta
D CC77DRAFT_1019209 casein kinase II subunit beta K03115 CSNK2B; casein kinase II subunit beta
C Other 90S particles
D CC77DRAFT_1042012 traub transciption factor family protein K14782 AATF; protein AATF/BFR2
D CC77DRAFT_1100637 hypothetical protein K14784 CMS1; protein CMS1
D CC77DRAFT_981591 nucleolar essential protein 1 K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
D CC77DRAFT_1019002 hypothetical protein K14785 ESF2; ESF2/ABP1 family protein
D CC77DRAFT_1021379 Krr1-domain-containing protein K14786 KRI1; protein KRI1
D CC77DRAFT_949488 eukaryotic type KH-domain (KH-domain type I) K06961 KRR1; ribosomal RNA assembly protein
D CC77DRAFT_1012664 multiple RNA-binding domain-containing protein 1 K14787 MRD1; multiple RNA-binding domain-containing protein 1
D CC77DRAFT_1039794 N-acetyltransferas-like protein K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-]
D CC77DRAFT_917230 hypothetical protein K11294 NCL; nucleolin
D CC77DRAFT_972765 hypothetical protein K14788 NOL10; ribosome biogenesis protein ENP2
D CC77DRAFT_1015220 hypothetical protein K14789 NOP6; nucleolar protein 6
D CC77DRAFT_639688 ARM repeat-containing protein K14790 NOP9; nucleolar protein 9
D CC77DRAFT_1019995 hypothetical protein K11135 PINX1; Pin2-interacting protein X1
D CC77DRAFT_1060427 periodic tryptophan protein-like protein K14791 PWP1; periodic tryptophan protein 1
D CC77DRAFT_1019477 18S rRNA biogenesis protein K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein
D CC77DRAFT_1092766 nucleic acid-binding protein K14792 RRP5; rRNA biogenesis protein RRP5
D CC77DRAFT_1067515 small nucleolar ribonucleo protein complex subunit K14793 RRP9; ribosomal RNA-processing protein 9
D CC77DRAFT_954266 NUC173-domain-containing protein K14794 RRP12; ribosomal RNA-processing protein 12
D CC77DRAFT_573920 DUF947-domain-containing protein K14795 RRP36; ribosomal RNA-processing protein 36
D CC77DRAFT_1030302 hypothetical protein K14796 TMA23; nucleolar protein TMA23
D CC77DRAFT_1098014 WD40 repeat-like protein K11806 DCAF13; DDB1- and CUL4-associated factor 13
B Pre-40S particles
C Kinases
D CC77DRAFT_1802 casein kinase I isoform epsilon K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1]
D CC77DRAFT_1021913 Serine/threonine-protein kinase Rio1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D CC77DRAFT_994300 serine/threonine-protein kinase RIO2 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
C Export and cytoplasmic maturation factors
D CC77DRAFT_499652 rRNA adenine dimethylase K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183]
D CC77DRAFT_863684 S-adenosyl-L-methionine-dependent methyltransferase K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309]
D CC77DRAFT_990111 bystin K14797 ENP1; essential nuclear protein 1
D CC77DRAFT_146386 Low temperature viability protein K14798 LTV1; protein LTV1
D CC77DRAFT_1018365 hypothetical protein K11883 NOB1; RNA-binding protein NOB1
D CC77DRAFT_1060658 eukaryotic type KH-domain (KH-domain type I) K11884 PNO1; RNA-binding protein PNO1
D CC77DRAFT_1054255 GTP-binding nuclear protein-like protein Ran K07936 RAN; GTP-binding nuclear protein Ran
D CC77DRAFT_1062125 P-loop containing nucleoside triphosphate hydrolase protein K18532 AK6; adenylate kinase [EC:2.7.4.3]
D CC77DRAFT_980103 DUF663-domain-containing protein K14799 TSR1; pre-rRNA-processing protein TSR1
D CC77DRAFT_939700 pre-rRNA-processing protein TSR2 K14800 TSR2; pre-rRNA-processing protein TSR2
D CC77DRAFT_529098 DUF367-domain-containing protein K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157]
D CC77DRAFT_1017059 hypothetical protein K14801 TSR4; pre-rRNA-processing protein TSR4
D CC77DRAFT_993806 hypothetical protein K14290 XPO1; exportin-1
D CC77DRAFT_1022173 ARM repeat-containing protein K14293 KPNB1; importin subunit beta-1
D CC77DRAFT_940127 ARM repeat-containing protein K18752 TNPO1; transportin-1
D CC77DRAFT_945737 ARM repeat-containing protein K20221 IPO4; importin-4
D CC77DRAFT_954969 ARM repeat-containing protein K20222 IPO5; importin-5
D CC77DRAFT_1017146 ARM repeat-containing protein K20223 IPO7; importin-7
D CC77DRAFT_1019061 ARM repeat-containing protein K20224 IPO9; importin-9
C Other pre-40S particles
D CC77DRAFT_1069693 phospholipid-translocating P-type ATPase K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1]
D CC77DRAFT_1019989 translation initiation factor eIF3 subunit K03245 EIF3J; translation initiation factor 3 subunit J
D CC77DRAFT_929884 PP2C-domain-containing protein K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16]
B Pre-60S particles
C Helicases
D CC77DRAFT_1028648 hypothetical protein K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D CC77DRAFT_1016543 ATP-dependent RNA helicase HAS1 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D CC77DRAFT_1098937 DEAD-domain-containing protein K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7]
D CC77DRAFT_939922 DEAD-domain-containing protein K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
D CC77DRAFT_1020691 ATP-dependent RNA helicase-like protein dbp7 K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7]
D CC77DRAFT_660413 P-loop containing nucleoside triphosphate hydrolase protein K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7]
D CC77DRAFT_1049019 DEAD-domain-containing protein K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7]
D CC77DRAFT_87562 DEAD-domain-containing protein K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
D CC77DRAFT_1065002 ATP-dependent RNA helicase DBP9 K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7]
D CC77DRAFT_1097837 DEAD-domain-containing protein K14811 DBP3; ATP-dependent RNA helicase DBP3 [EC:5.6.2.7]
D CC77DRAFT_993628 ATP-dependent RNA helicase DOB1 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
C GTPases
D CC77DRAFT_1039497 hypothetical protein K14538 NUG1; nuclear GTP-binding protein
D CC77DRAFT_1025749 NGP1NT-domain-containing protein K14537 NUG2; nuclear GTP-binding protein
D CC77DRAFT_983232 nucleolar GTP-binding protein 1 K06943 NOG1; nucleolar GTP-binding protein
D CC77DRAFT_991065 ribosome biogenesis GTPase-like protein Lsg1 K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-]
D CC77DRAFT_957795 elongation factor 2 K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-]
C RNases
D CC77DRAFT_1091840 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CC77DRAFT_947753 hypothetical protein K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D CC77DRAFT_269694 hypothetical protein K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D RNase MRP
E CC77DRAFT_1024869 POPLD-domain-containing protein K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
E CC77DRAFT_978812 hypothetical protein K14522 POP3; ribonuclease P/MRP protein subunit POP3 [EC:3.1.26.5]
E CC77DRAFT_1020753 hypothetical protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
E CC77DRAFT_989767 hypothetical protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
E CC77DRAFT_1045689 hypothetical protein K14526 POP7; ribonuclease P/MRP protein subunit POP7 [EC:3.1.26.5]
E CC77DRAFT_1052620 hypothetical protein K14528 POP8; ribonuclease P/MRP protein subunit POP8 [EC:3.1.26.5]
E CC77DRAFT_1019668 ribonuclease P/MRP 30 subunit K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
E CC77DRAFT_932612 hypothetical protein K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
E CC77DRAFT_143778 hypothetical protein K14532 RMP1; ribonuclease MRP protein subunit RMP1
C Kinases
D CC77DRAFT_1802 casein kinase I isoform epsilon K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1]
D CC77DRAFT_1016840 hypothetical protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
C Export and cytoplasmic maturation factors
D CC77DRAFT_1019920 ATP-binding cassette sub-family F member 3 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2
D CC77DRAFT_510755 DnaJ-domain-containing protein K09506 DNAJA5; DnaJ homolog subfamily A member 5
D CC77DRAFT_1032003 eukaryotic translation initiation factor-like protein 6 K03264 EIF6; translation initiation factor 6
D CC77DRAFT_1019642 heat shock protein-like protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D CC77DRAFT_74722 heat shock protein 70 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D CC77DRAFT_976168 mRNA turnover protein 4 K14815 MRT4; mRNA turnover protein 4
D CC77DRAFT_570364 NMD3-domain-containing protein K07562 NMD3; 60S ribosomal export protein NMD3
D CC77DRAFT_1065592 hypothetical protein K14284 NXF; nuclear RNA export factor
D CC77DRAFT_1054255 GTP-binding nuclear protein-like protein Ran K07936 RAN; GTP-binding nuclear protein Ran
D CC77DRAFT_1057177 hypothetical protein K14816 REI1; pre-60S factor REI1
D CC77DRAFT_178261 hypothetical protein K14816 REI1; pre-60S factor REI1
D CC77DRAFT_1099955 hypothetical protein K14817 LOC1; 60S ribosomal subunit assembly/export protein LOC1
D CC77DRAFT_955202 Shwachman-Bodian-diamond syndrome protein K14574 SDO1; ribosome maturation protein SDO1
D CC77DRAFT_627085 AAA-domain-containing protein K14575 AFG2; AAA family ATPase
D CC77DRAFT_371298 ribosome biogenesis protein Sqt1 K14818 SQT1; ribosome assembly protein SQT1
D CC77DRAFT_993806 hypothetical protein K14290 XPO1; exportin-1
D CC77DRAFT_1022173 ARM repeat-containing protein K14293 KPNB1; importin subunit beta-1
D CC77DRAFT_940127 ARM repeat-containing protein K18752 TNPO1; transportin-1
D CC77DRAFT_945737 ARM repeat-containing protein K20221 IPO4; importin-4
D CC77DRAFT_954969 ARM repeat-containing protein K20222 IPO5; importin-5
D CC77DRAFT_1017146 ARM repeat-containing protein K20223 IPO7; importin-7
D CC77DRAFT_1019061 ARM repeat-containing protein K20224 IPO9; importin-9
D CC77DRAFT_219421 dual specificity protein phosphatase 12 K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48]
D CC77DRAFT_942395 phosphatases II K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48]
C 5-FMC complex
D CC77DRAFT_1057082 pre-rRNA-processing protein-like protein ipi1 K14827 IPI1; pre-rRNA-processing protein IPI1
D CC77DRAFT_953205 WD domain-containing protein K14829 IPI3; pre-rRNA-processing protein IPI3
D CC77DRAFT_707372 Las1-domain-containing protein K16912 LAS1; ribosomal biogenesis protein LAS1
C Ribosome quality control proteins
D CC77DRAFT_959417 hypothetical protein K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27]
D CC77DRAFT_229695 Nulp1-pending protein-like protein K24970 TCF25; transcription factor 25
D CC77DRAFT_1059358 hypothetical protein K24971 NEMF; nuclear export mediator factor NEMF
D CC77DRAFT_1058862 AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D CC77DRAFT_933696 polyubiquitin-tagged protein recognition complex, Npl4 component K14015 NPLOC4; nuclear protein localization protein 4
D CC77DRAFT_146133 ubiquitin fusion-degradation protein K14016 UFD1; ubiquitin fusion degradation protein 1
D CC77DRAFT_28654 ankyrin repeat and zinc finger domain-containing protein 1 K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1
C Other pre-60S particles
D CC77DRAFT_141715 brix domain-containing protein 2 K14820 BRX1; ribosome biogenesis protein BRX1
D CC77DRAFT_1005285 zinc finger-containing protein K14821 BUD20; bud site selection protein 20
D CC77DRAFT_1024515 hypothetical protein K14822 CGR1; rRNA-processing protein CGR1
D CC77DRAFT_1018345 Ebp2-domain-containing protein K14823 EBP2; rRNA-processing protein EBP2
D CC77DRAFT_959644 BOP1NT-domain-containing protein K14824 ERB1; ribosome biogenesis protein ERB1
D CC77DRAFT_985585 hypothetical protein K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8]
D CC77DRAFT_1019793 60S ribosome biogenesis protein Mak11 K14830 MAK11; protein MAK11
D CC77DRAFT_1042765 Mak16 protein K14831 MAK16; protein MAK16
D CC77DRAFT_959705 CBF-domain-containing protein K14832 MAK21; ribosome biogenesis protein MAK21
D CC77DRAFT_1027172 midasin K14572 MDN1; midasin
D CC77DRAFT_952543 60S ribosome subunit biogenesis protein NIP7 K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7
D CC77DRAFT_1044379 nucleolar complex protein 2 K14833 NOC2; nucleolar complex protein 2
D CC77DRAFT_978721 nucleolar complex-associated protein 3 K14834 NOC3; nucleolar complex protein 3
D CC77DRAFT_1021123 NOL1/NOP2/sun family putative RNA met K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310]
D CC77DRAFT_1020727 RNA-binding domain-containing protein K14573 NOP4; nucleolar protein 4
D CC77DRAFT_933882 hypothetical protein K14837 NOP12; nucleolar protein 12
D CC77DRAFT_1022426 hypothetical protein K14838 NOP15; nucleolar protein 15
D CC77DRAFT_995898 hypothetical protein K14839 NOP16; nucleolar protein 16
D CC77DRAFT_1031428 P60-like protein K14840 NOP53; nucleolar protein 53
D CC77DRAFT_1019581 TGF-beta-inducible nuclear protein 1 K14842 NSA2; ribosome biogenesis protein NSA2
D CC77DRAFT_1090414 hypothetical protein K14843 PES1; pescadillo
D CC77DRAFT_1048857 pumilio domain-containing protein K14844 PUF6; pumilio homology domain family member 6
D CC77DRAFT_1060427 periodic tryptophan protein-like protein K14791 PWP1; periodic tryptophan protein 1
D CC77DRAFT_1021225 RAI1-domain-containing protein K14845 RAI1; RAT1-interacting protein
D CC77DRAFT_964749 hypothetical protein K14828 RIX1; pre-rRNA-processing protein RIX1
D CC77DRAFT_118969 ribosome biogenesis ATPase RIX7 K14571 RIX7; ribosome biogenesis ATPase
D CC77DRAFT_853357 Brix-domain-containing protein K14846 RPF1; ribosome production factor 1
D CC77DRAFT_1099466 ribosome biogenesis protein-like protein RPF2 K14847 RPF2; ribosome production factor 2
D CC77DRAFT_694958 glutamate-rich WD repeat-containing protein 1 K14848 RRB1; ribosome assembly protein RRB1
D CC77DRAFT_1039663 nucleolar K14849 RRP1; ribosomal RNA-processing protein 1
D CC77DRAFT_1016775 ribosomal RNA-processing protein 8 K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287]
D CC77DRAFT_954266 NUC173-domain-containing protein K14794 RRP12; ribosomal RNA-processing protein 12
D CC77DRAFT_1094428 hypothetical protein K14851 RRP17; ribosomal RNA-processing protein 17
D CC77DRAFT_1060876 RRS1-domain-containing protein K14852 RRS1; regulator of ribosome biosynthesis
D CC77DRAFT_1017552 hypothetical protein K14854 RSA3; ribosome assembly protein 3
D CC77DRAFT_1019902 WD40 repeat-like protein K14855 RSA4; ribosome assembly protein 4
D CC77DRAFT_1041915 SDA1-domain-containing protein K14856 SDA1; protein SDA1
D CC77DRAFT_990206 hypothetical protein K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
D CC77DRAFT_1065394 Brix-domain-containing protein K14859 SSF1_2; ribosome biogenesis protein SSF1/2
D CC77DRAFT_639934 hypothetical protein K14860 TMA16; translation machinery-associated protein 16
D CC77DRAFT_1001621 hypothetical protein K14861 URB1; nucleolar pre-ribosomal-associated protein 1
D CC77DRAFT_1056908 hypothetical protein K23309 ZNHIT3; zinc finger HIT domain-containing protein 3
B Other ribosome biogenesis factors
C CC77DRAFT_989979 hypothetical protein K15262 BCP1; protein BCP1
C CC77DRAFT_1020052 hypothetical protein K15263 LYER; cell growth-regulating nucleolar protein
C CC77DRAFT_1096428 S-adenosyl-L-methionine-dependent methyltransferase K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311]
C CC77DRAFT_1031159 alpha/beta knot K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-]
C CC77DRAFT_1098056 FtsJ-domain-containing protein K15508 MRM2; 21S rRNA (uridine2791-2'-O)-methyltransferase [EC:2.1.1.168]
C CC77DRAFT_137686 hypothetical protein K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286]
C CC77DRAFT_916296 hypothetical protein K19307 BMT5; 25S rRNA (uracil2634-N3)-methyltransferase [EC:2.1.1.313]
C CC77DRAFT_1026688 hypothetical protein K19308 BMT6; 25S rRNA (uracil2843-N3)-methyltransferase [EC:2.1.1.312]
C CC77DRAFT_953278 mitochondrial GTPase 1 K19828 MTG1; mitochondrial GTPase 1
C CC77DRAFT_1012886 GTP-binding protein-like protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
C CC77DRAFT_1034935 hypothetical protein K19829 GEP3; genetic interactor of prohibitins 3, mitochondrial
C CC77DRAFT_530351 S-adenosyl-L-methionine-dependent methyltransferase K15267 MTEF1; mitochondrial transcription factor 1
C CC77DRAFT_1019355 hypothetical protein K18803 HPM1; protein-histidine N-methyltransferase [EC:2.1.1.85]
C CC77DRAFT_951659 SET domain-containing protein K27349 RKM2; ribosomal lysine N-methyltransferase 2 [EC:2.1.1.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
D CC77DRAFT_1047308 nucleolar protein 5A K14564 NOP56; nucleolar protein 56
D CC77DRAFT_1024619 L30e-like protein K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
C Box H/ACA snoRNPs
D CC77DRAFT_964482 putative rRNA pseudouridine synthase K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D CC77DRAFT_1018821 H/ACA ribonucleo protein-like protein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
B rRNA transcription factors
B rRNA modification factors
C 16S rRNA modification factors
C 23S rRNA modification factors
B ribosomal protein modification factors
B rRNA processing factors
C CC77DRAFT_936975 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C CC77DRAFT_1064506 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
B rRNA helicases
B GTPases
C CC77DRAFT_1012886 GTP-binding protein-like protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
B Other maturation factors
C CC77DRAFT_1023822 translation initiation protein Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C CC77DRAFT_1071189 P-loop containing nucleoside triphosphate hydrolase protein K06942 ychF; ribosome-binding ATPase
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024