+E Ribosome biogenesis KO
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Ribosome Biogenesis - Acinetobacter pittii
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D BDGL_001989 rnc; ribonuclease III, ds RNA K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D BDGL_003444 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C BDGL_001988 era; GTP-binding protein Era K03595 era; GTPase
C BDGL_001968 yhbZ; GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C BDGL_003159 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
C BDGL_003244 nusA; nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
C BDGL_002861 nusB; transcription termination, L factor (N utilization substance protein B) K03625 nusB; transcription antitermination protein NusB
C BDGL_003187 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D BDGL_001606 rsuA; 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D BDGL_002458 ksgA; S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase, kasugamycin resistance K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D BDGL_002929 sun; 16S rRNA (cytosine(967)-C(5))-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D BDGL_002299 rsmC; ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D BDGL_000301 rsmD; putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D BDGL_001829 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D BDGL_000940 gidB; 16S rRNA methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D BDGL_002670 mraW; 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D BDGL_000330 putative methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D BDGL_003550 hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
C 23S rRNA modification factors
D BDGL_002663 rrmA; 23S rRNA methyltransferase RumA K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D BDGL_003234 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D BDGL_002123 ftsJ; cell division protein K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D BDGL_000312 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D BDGL_002481 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D BDGL_000441 ycbY; 23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))-methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D BDGL_003411 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D BDGL_003485 rumA; 23S rRNA (uracil(1939)-C(5))-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D BDGL_001930 rluA; dual specificity pseudouridine synthase for 23S rRNA and tRNAphe modification K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D BDGL_003016 rluA; putative dual specificity pseudouridine synthase for 23S rRNA and tRNAphe modification (RluA-like) K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D BDGL_001603 putative pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D BDGL_000080 rluB; 23S rRNA pseudouridylate synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D BDGL_003311 rluC; 23S rRNA pseudouridylate synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D BDGL_000108 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D BDGL_001947 rluE; 23S rRNA pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
B ribosomal protein modification factors
C BDGL_000135 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C BDGL_002627 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
C BDGL_001460 yliG; MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
C BDGL_000402 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
C BDGL_001672 prmA; methylation of 50S ribosomal subunit protein L11 (ribosomal protein L11 methyltransferase) K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
C BDGL_001054 putative adenine-specific methylase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
C BDGL_000930 xseA; exodeoxyribonuclease VII large subunit K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
B rRNA processing factors
C BDGL_001989 rnc; ribonuclease III, ds RNA K03685 rnc; ribonuclease III [EC:3.1.26.3]
C BDGL_003310 rne; ribonuclease E (RNase E): endoribonuclease for rRNA processing and mRNA degradation K08300 rne; ribonuclease E [EC:3.1.26.12]
C BDGL_002230 cafA; ribonuclease G, endoribonuclease G (cytoplasmic axial filament protein) K08301 rng; ribonuclease G [EC:3.1.26.-]
C BDGL_003229 putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
B rRNA helicases
B GTPases
C BDGL_001988 era; GTP-binding protein Era K03595 era; GTPase
C BDGL_003443 engC; GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C BDGL_003419 engA; GTP-binding protein K03977 engA; GTPase
C BDGL_001968 yhbZ; GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
C BDGL_002452 hflX; GTP-binding protein K03665 hflX; GTPase
B Other maturation factors
C BDGL_003086 yrdC; putative SUA5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C BDGL_002640 spoT; putative bifunctional protein (SpoT) K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C BDGL_003246 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C BDGL_003243 hypothetical protein K09748 rimP; ribosome maturation factor RimP
C BDGL_003478 hypothetical protein K09710 ybeB; ribosome-associated protein
C BDGL_002490 hypothetical protein K07042 ybeY; probable rRNA maturation factor
C BDGL_002124 hypothetical protein K07574 yhbY; RNA-binding protein
C BDGL_003496 hypothetical protein K09889 yjgA; ribosome-associated protein
C BDGL_003532 rpoX; putative sigma(54) modulation protein RpoX K05808 hpf; ribosome hibernation promoting factor
C BDGL_000864 ychF; translation-associated GTPase K06942 ychF; ribosome-binding ATPase
C BDGL_000085 hypothetical protein K07040 yceD; DUF177 domain-containing protein
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
!
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 9, 2024