+D GENES KO #

  KEGG Orthology (KO) - Aliarcobacter cryaerophilus

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:acre00010] D ACRYA_0785 pgi; phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D ACRYA_1095 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D ACRYA_0248 fbaA; fructose-bisphosphate aldolase, class IIA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ACRYA_1740 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D ACRYA_1738 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ACRYA_1923 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ACRYA_1739 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D ACRYA_0426 pgm; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D ACRYA_0293 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ACRYA_1768 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40] D ACRYA_0726 aceE; pyruvate dehydrogenase multienzyme complex, E1 component pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ACRYA_0725 aceF; pyruvate dehydrogenase multienzyme complex, E2 component dihydrolipoyl transacetylase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D ACRYA_0724 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ACRYA_1073 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D ACRYA_1074 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D ACRYA_0377 aldB; aldehyde dehydrogenase B K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D ACRYA_0278 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase II (CitE domain) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ACRYA_0787 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D ACRYA_1100 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:acre00020] D ACRYA_1658 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D ACRYA_1110 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D ACRYA_1028 icd; isocitrate dehydrogenase, monomeric K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D ACRYA_0724 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ACRYA_1073 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D ACRYA_1074 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D ACRYA_1075 oorC; 2-oxoglutarate:acceptor oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D ACRYA_1072 oorD; 2-oxoglutarate:acceptor oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D ACRYA_1668 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D ACRYA_1669 frdB; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D ACRYA_1667 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D ACRYA_0275 fumA; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D ACRYA_1029 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ACRYA_1467 mqo; malate:quinone-oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D ACRYA_0598 pycA; pyruvate carboxylase, subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D ACRYA_1805 pyruvate/oxaloacetate carboxyltransferase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D ACRYA_1100 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D ACRYA_0726 aceE; pyruvate dehydrogenase multienzyme complex, E1 component pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ACRYA_0725 aceF; pyruvate dehydrogenase multienzyme complex, E2 component dihydrolipoyl transacetylase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:acre00030] D ACRYA_0785 pgi; phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D ACRYA_1078 rpe; ribulose phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D ACRYA_1798 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D ACRYA_1840 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D ACRYA_1568 rpiB; allose-6-phosphate isomerase / ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D ACRYA_0787 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D ACRYA_1501 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D ACRYA_0248 fbaA; fructose-bisphosphate aldolase, class IIA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ACRYA_1095 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] C 00040 Pentose and glucuronate interconversions [PATH:acre00040] D ACRYA_0137 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D ACRYA_0786 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ACRYA_1078 rpe; ribulose phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D ACRYA_1036 putative aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:acre00051] D ACRYA_0787 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D ACRYA_0756 bifunctional mannose-6-phosphate isomerase / mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D ACRYA_0758 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D ACRYA_0759 GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D ACRYA_1036 putative aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D ACRYA_1095 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D ACRYA_0248 fbaA; fructose-bisphosphate aldolase, class IIA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ACRYA_1740 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D ACRYA_1568 rpiB; allose-6-phosphate isomerase / ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:acre00052] D ACRYA_0781 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D ACRYA_0786 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ACRYA_0787 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00053 Ascorbate and aldarate metabolism D ACRYA_0137 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00500 Starch and sucrose metabolism [PATH:acre00500] D ACRYA_0786 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ACRYA_0787 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D ACRYA_0785 pgi; phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:acre00520] D ACRYA_1135 glycosyl hydrolase, family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D ACRYA_1525 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D ACRYA_1905 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D ACRYA_0163 glmU; fused N-acetylglucosamine-1-phosphate uridyltransferase and glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D ACRYA_0512 murA; UDP-N-acetylglucosamine enolpyruvoyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D ACRYA_0116 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D ACRYA_1272 dTDP-4-amino-4,6-dideoxygalactose transaminase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D ACRYA_0123 pseB; UDP-N-acetylglucosamine 4,6-dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D ACRYA_0126 pseG; UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranosyl transferase K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57] D ACRYA_0127 pseI; pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97] D ACRYA_0125 pseF; CMP-pseudaminic acid synthetase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81] D ACRYA_0151 legG; GDP-2,4-diacetamido-2,4, 6-trideoxy-alpha-D-glucopyranose hydrolase / 2-epimerase K18429 legG; GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing) [EC:3.2.1.184] D ACRYA_0150 N-acetylneuraminate synthase family protein, putative legionaminic acid synthase LegI K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101] D ACRYA_0155 CMP-N-acetylneuraminic acid synthetase K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82] D ACRYA_0787 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D ACRYA_0786 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ACRYA_0137 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D ACRYA_0781 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D ACRYA_0785 pgi; phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D ACRYA_0756 bifunctional mannose-6-phosphate isomerase / mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D ACRYA_0758 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D ACRYA_0148 aminotransferase, DegT/DnrJ/EryC1/StrS family K13010 per; perosamine synthetase [EC:2.6.1.102] D ACRYA_0759 GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D ACRYA_0760 aminotransferase, DegT/DnrJ/EryC1/StrS family K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1] C 00620 Pyruvate metabolism [PATH:acre00620] D ACRYA_0278 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase II (CitE domain) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ACRYA_1073 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D ACRYA_1074 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D ACRYA_0726 aceE; pyruvate dehydrogenase multienzyme complex, E1 component pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ACRYA_0725 aceF; pyruvate dehydrogenase multienzyme complex, E2 component dihydrolipoyl transacetylase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D ACRYA_0724 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ACRYA_1490 ackA1; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D ACRYA_1492 ackA2; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D ACRYA_1491 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D ACRYA_1768 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40] D ACRYA_0230 accA; acetyl-CoA carboxylase, carboxyltransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D ACRYA_1981 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D ACRYA_1982 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D ACRYA_1521 accD; acetyl-CoA carboxylase, carboxyltransferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D ACRYA_0377 aldB; aldehyde dehydrogenase B K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D ACRYA_0959 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D ACRYA_1804 OAD_gamma domain-containing protein K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D ACRYA_0598 pycA; pyruvate carboxylase, subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D ACRYA_1805 pyruvate/oxaloacetate carboxyltransferase K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D ACRYA_1029 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ACRYA_1467 mqo; malate:quinone-oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D ACRYA_0275 fumA; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D ACRYA_1668 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D ACRYA_1669 frdB; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D ACRYA_1667 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D ACRYA_1100 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D ACRYA_1513 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:acre00630] D ACRYA_0278 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase II (CitE domain) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ACRYA_1029 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ACRYA_1658 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D ACRYA_1110 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D ACRYA_0277 enoyl-CoA hydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148] D ACRYA_0515 glycolate oxidase, subunit GlcD-related protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D ACRYA_1122 anaerobic glycerol-3-phosphate dehydrogenase K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D ACRYA_0783 catalase K03781 katE; catalase [EC:1.11.1.6] D ACRYA_1597 katA; catalase K03781 katE; catalase [EC:1.11.1.6] D ACRYA_0036 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D ACRYA_0931 phosphoglycolate phosphatase-like HAD superfamily hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D ACRYA_1873 HAD superfamily hydrolase, probable phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D ACRYA_1367 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ACRYA_1171 glyA2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ACRYA_1279 glyA1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ACRYA_0724 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ACRYA_1198 fdhA; formate dehydrogenase N, alpha subunit, selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D ACRYA_1197 fdhGII; formate dehydrogenase N, beta subunit, iron-sulfur cluster subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D ACRYA_1196 fdhO; formate dehydrogenase N, cytochrome b-556 subunit K00127 fdoI; formate dehydrogenase subunit gamma D ACRYA_0827 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:acre00640] D ACRYA_0278 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase II (CitE domain) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ACRYA_1490 ackA1; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D ACRYA_1492 ackA2; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D ACRYA_1491 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D ACRYA_0724 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ACRYA_1976 quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D ACRYA_0230 accA; acetyl-CoA carboxylase, carboxyltransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D ACRYA_1981 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D ACRYA_1982 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D ACRYA_1521 accD; acetyl-CoA carboxylase, carboxyltransferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D ACRYA_1835 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D ACRYA_1834 acnD; [Fe-S] cluster-dependent 2-methylisocitrate dehydratase K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D ACRYA_1833 prpF; aconitate isomerase K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D ACRYA_1110 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D ACRYA_1836 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] C 00650 Butanoate metabolism [PATH:acre00650] D ACRYA_1668 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D ACRYA_1669 frdB; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D ACRYA_1667 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D ACRYA_1073 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D ACRYA_1074 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D ACRYA_0037 als; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ACRYA_0984 ilvI; acetolactate synthase III, valine-sensitive, catalytic (large) subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ACRYA_0983 ilvH; acetolactate synthase III, valine-sensitive, regulatory (small) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:acre00660] D ACRYA_0037 als; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ACRYA_0984 ilvI; acetolactate synthase III, valine-sensitive, catalytic (large) subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ACRYA_0983 ilvH; acetolactate synthase III, valine-sensitive, regulatory (small) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D ACRYA_0277 enoyl-CoA hydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148] D ACRYA_1831 leuC; isopropylmalate isomerase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D ACRYA_0802 leuD; isopropylmalate isomerase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D ACRYA_0803 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:acre00562] D ACRYA_0525 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D ACRYA_1526 suhB; inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D ACRYA_1740 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:acre00190] D ACRYA_1653 nuoA; NADH:quinone oxidoreductase I, membrane subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D ACRYA_1654 nuoB; NADH:quinone oxidoreductase I, chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D ACRYA_1655 nuoCD; NADH:quinone oxidoreductase I, fused chains C and D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D ACRYA_1656 nuoE; NADH:quinone oxidoreductase I, chain E (thioredoxin-like [2Fe-2S] ferredoxin family) K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D ACRYA_0114 NADH:quinone oxidoreductase I, chain G-like protein K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D ACRYA_1657 nuoF; NADH:quinone oxidoreductase I, NADH-binding chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D ACRYA_1659 nuoG; NADH:quinone oxidoreductase I, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D ACRYA_1660 nuoH; NADH:quinone oxidoreductase I, membrane subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D ACRYA_1661 nuoI; NADH:quinone oxidoreductase I, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D ACRYA_1662 nuoJ; NADH:quinone oxidoreductase I, membrane subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D ACRYA_1663 nuoK; NADH:quinone oxidoreductase I, membrane subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D ACRYA_1664 nuoL; NADH:quinone oxidoreductase I, membrane subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D ACRYA_1665 nuoM; NADH:quinone oxidoreductase I, membrane subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D ACRYA_1666 nuoN; NADH:quinone oxidoreductase I, membrane subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D ACRYA_1668 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D ACRYA_1669 frdB; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D ACRYA_1667 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D ACRYA_0241 petA; ubiquinol cytochrome c oxidoreductase PetABC, [2Fe-2S] subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D ACRYA_0240 petB; ubiquinol cytochrome c oxidoreductase PetABC, cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D ACRYA_0239 petC; ubiquinol cytochrome c oxidoreductase PetABC, membrane-bound cytochrome c subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D ACRYA_0569 putative membrane protein K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D ACRYA_1694 ccoN; cytochrome c oxidase CcoNOPQ, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D ACRYA_1693 ccoO; cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D ACRYA_1692 ccoQ; cytochrome c oxidase CcoNOPQ, cbb3-type, subunit IV K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D ACRYA_1691 ccoP; cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D ACRYA_1031 cccA1; periplasmic monoheme cytochrome c553 K08738 CYC; cytochrome c D ACRYA_1442 cytochrome c K08738 CYC; cytochrome c D ACRYA_1454 cccA2; periplasmic monoheme cytochrome c553 K08738 CYC; cytochrome c D ACRYA_a0024 putative cytochrome c K08738 CYC; cytochrome c D ACRYA_1618 atpA; ATP synthase, F1 complex, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D ACRYA_1616 atpD; ATP synthase, F1 complex, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D ACRYA_1617 atpG; ATP synthase, F1 complex, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D ACRYA_1619 atpH; ATP synthase, F1 complex, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D ACRYA_1615 atpC; ATP synthase, F1 complex, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D ACRYA_0246 atpB; ATP synthase, F0 complex, a subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D ACRYA_1620 atpF; ATP synthase, F0 complex, b subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D ACRYA_1621 atpF'; ATP synthase, F0 complex, b' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D ACRYA_1351 atpE; ATP synthase, F0 complex, c subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D ACRYA_1602 ppaB; inorganic pyrophosphatase, manganese-dependent K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] D ACRYA_1427 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D ACRYA_1428 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D ACRYA_1637 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:acre00680] D ACRYA_1198 fdhA; formate dehydrogenase N, alpha subunit, selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D ACRYA_1197 fdhGII; formate dehydrogenase N, beta subunit, iron-sulfur cluster subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D ACRYA_1196 fdhO; formate dehydrogenase N, cytochrome b-556 subunit K00127 fdoI; formate dehydrogenase subunit gamma D ACRYA_1171 glyA2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ACRYA_1279 glyA1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ACRYA_0293 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ACRYA_1029 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ACRYA_0248 fbaA; fructose-bisphosphate aldolase, class IIA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ACRYA_1095 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D ACRYA_1083 molybdopterin-containing oxidoreductase II, DMSO/TMAO/BSO reductase family, catalytic subunit K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D ACRYA_1490 ackA1; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D ACRYA_1492 ackA2; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D ACRYA_1491 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D ACRYA_0278 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase II (CitE domain) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ACRYA_0426 pgm; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D ACRYA_0223 serA; alpha-ketoglutarate reductase / D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D ACRYA_1841 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:acre00910] D ACRYA_0262 napA; periplasmic nitrate reductase NapAB, large subunit K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D ACRYA_0259 napB; periplasmic nitrate reductase NapAB, small subunit, periplasmic diheme cytochrome c550 protein K02568 napB; nitrate reductase (cytochrome), electron transfer subunit D ACRYA_1439 nitrite reductase NirS, cytochrome cd1 type K15864 nirS; nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1] D ACRYA_1437 nitric oxide reductase, large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5] D ACRYA_1436 cytochrome c, putative nitric oxide reductase small subunit K02305 norC; nitric oxide reductase subunit C D ACRYA_1560 npd; nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D ACRYA_1681 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D ACRYA_1367 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ACRYA_1764 canB; beta carbonic anhydrase, clade B K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:acre00920] D ACRYA_2021 sbp; sulfate ABC transporter, sulfate binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D ACRYA_2016 cysT; sulfate ABC transporter CysATW, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D ACRYA_2015 cysW; sulfate ABC transporter CysATW, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D ACRYA_2014 cysA; sulfate ABC transporter CysATW, ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D ACRYA_0032 cysN; sulfate adenylyltransferase, GTPase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D ACRYA_0031 cysD; sulfate adenylyltransferase, subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D ACRYA_0212 nrnA; nanoRNase / pAp phosphatase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D ACRYA_0030 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D ACRYA_1216 soxA; sulfur oxidation protein SoxXA, diheme cytochrome c subunit K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D ACRYA_1213 soxX; sulfur oxidation protein SoxXA, monoheme cytochrome c subunit K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D ACRYA_1214 soxY; sulfur oxidation protein SoxYZ, sulfur covalently binding protein K17226 soxY; sulfur-oxidizing protein SoxY D ACRYA_1215 soxZ; sulfur oxidation protein SoxYZ, sulfur compound chelating protein K17227 soxZ; sulfur-oxidizing protein SoxZ D ACRYA_1218 soxB; sulfur oxidation protein, thiosulfate hydrolase K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20] D ACRYA_1211 soxC; sulfur oxidation protein SoxCD, sulfur dehydrogenase subunit K17225 soxC; sulfane dehydrogenase subunit SoxC D ACRYA_1212 soxD; sulfur oxidation protein SoxCD, diheme cytochrome c subunit K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6] D ACRYA_0033 cysI; sulfite reductase, iron-sulfur subunit K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1] D ACRYA_1648 nirA; ferredoxin-nitrite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1] D ACRYA_1829 putative NADH dehydrogenase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D ACRYA_0730 flavocytochrome c sulfide dehydrogenase, flavin-binding K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3] D ACRYA_0731 cytochrome c K17230 fccA; cytochrome subunit of sulfide dehydrogenase D ACRYA_0693 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D ACRYA_0028 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D ACRYA_0740 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D ACRYA_1543 Cys/Met metabolism PLP-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:acre00061] D ACRYA_0230 accA; acetyl-CoA carboxylase, carboxyltransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D ACRYA_1981 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D ACRYA_1982 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D ACRYA_1521 accD; acetyl-CoA carboxylase, carboxyltransferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D ACRYA_0232 acpP1; acyl carrier protein K02078 acpP; acyl carrier protein D ACRYA_0656 acpP2; acyl carrier protein K02078 acpP; acyl carrier protein D ACRYA_0668 acpP3; acyl carrier protein K02078 acpP; acyl carrier protein D ACRYA_1607 fabD; malonyl-CoA-[acp] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D ACRYA_1264 3-oxoacyl-[acp] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D ACRYA_1673 fabH; beta-ketoacyl-[acp] synthase III (KASIII) K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D ACRYA_0670 beta-ketoacyl-[acp] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D ACRYA_0231 fabF; beta-ketoacyl-[acp] synthase II (KASII) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D ACRYA_0655 beta-ketoacyl-[acp] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D ACRYA_0130 short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ACRYA_0233 fabG; 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ACRYA_0663 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ACRYA_0100 fabZ; 3-hydroxyacyl-[acp] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D ACRYA_0667 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D ACRYA_1741 fabI; enoyl-[acp] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:acre00121] D ACRYA_0869 short-chain dehydrogenase/reductase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:acre00561] D ACRYA_1674 plsX; acyl phosphate synthase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D ACRYA_0209 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D ACRYA_1731 plsC; 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D ACRYA_2028 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] C 00564 Glycerophospholipid metabolism [PATH:acre00564] D ACRYA_1977 gpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D ACRYA_0209 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D ACRYA_1731 plsC; 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D ACRYA_0132 glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39] D ACRYA_2028 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D ACRYA_1079 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D ACRYA_1819 cdsA; CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D ACRYA_0987 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D ACRYA_1760 psd; phosphatidylserine decarboxylase, proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D ACRYA_0868 pgsA; phosphatidylglycerophosphate synthase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D ACRYA_1902 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] C 00565 Ether lipid metabolism [PATH:acre00565] D ACRYA_1079 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism D ACRYA_1079 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D ACRYA_1079 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:acre00592] D ACRYA_1079 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:acre00230] D ACRYA_0787 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D ACRYA_1501 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D ACRYA_1701 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D ACRYA_0975 purD; phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D ACRYA_2040 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D ACRYA_1645 purL; phosphoribosylformylglycinamidine synthase PurLQS, PurL subunit K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D ACRYA_1728 purS; phosphoribosylformylglycinamidine synthase PurLQS, PurS subunit K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D ACRYA_1729 purQ; phosphoribosylformylglycinamidine synthase PurLQS, glutaminase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D ACRYA_1924 purM; phosphoribosylformylglycinamide cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D ACRYA_0306 purE2; 5-aminoimidazole ribonucleotide (AIR) carboxylase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D ACRYA_1727 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D ACRYA_1964 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D ACRYA_1644 purH; AICAR transformylase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D ACRYA_1539 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D ACRYA_1935 umpG; broad specificity 5'(3')-nucleotidase and polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D ACRYA_0689 DUF1255 domain-containing protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D ACRYA_1227 DUF1255 domain-containing protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D ACRYA_0826 multi-copper polyphenol oxidoreductase laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D ACRYA_0813 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D ACRYA_1677 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D ACRYA_0587 putative dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D ACRYA_1109 putative nucleotide phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D ACRYA_0911 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D ACRYA_1458 gmk; deoxyguanylate kinase / guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D ACRYA_1965 nrdA; aerobic ribonucleoside-diphosphate reductase Ia, B1 protein subunit NrdA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D ACRYA_1966 nrdB; aerobic ribonucleoside-diphosphate reductase Ia, B2 protein subunit NrdB K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D ACRYA_1013 nrdD2; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D ACRYA_a0010 dgt; dGTP triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D ACRYA_1558 spoT; ppGpp synthetase / guanosine-3',5'-bis(diphosphate) 3' pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D ACRYA_0527 gppA; guanosine-5'-triphosphate, 3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D ACRYA_0986 exopolyphosphatase, Ppx/GppA family K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D ACRYA_0917 CHASE2 sensor-containing adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D ACRYA_1914 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D ACRYA_1331 metallophosphoesterase (YmdB domain) K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D ACRYA_1260 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D ACRYA_1261 adkII; adenylate kinase (lid-domain-containing Adk) K00939 adk; adenylate kinase [EC:2.7.4.3] D ACRYA_0625 histidine triad nucleotide-binding protein, Fhit branch K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D ACRYA_0032 cysN; sulfate adenylyltransferase, GTPase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D ACRYA_0031 cysD; sulfate adenylyltransferase, subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:acre00240] D ACRYA_0742 carB; carbamoylphosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D ACRYA_1912 carA; carbamoylphosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D ACRYA_1909 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D ACRYA_1785 pyrC; dihydroorotase, homodimeric type K01465 URA4; dihydroorotase [EC:3.5.2.3] D ACRYA_0872 pyrD; dihydroorotate dehydrogenase 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D ACRYA_0056 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D ACRYA_1370 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D ACRYA_1556 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D ACRYA_1677 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D ACRYA_1748 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D ACRYA_1929 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D ACRYA_1935 umpG; broad specificity 5'(3')-nucleotidase and polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D ACRYA_0689 DUF1255 domain-containing protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D ACRYA_1227 DUF1255 domain-containing protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D ACRYA_1331 metallophosphoesterase (YmdB domain) K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D ACRYA_1013 nrdD2; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D ACRYA_1965 nrdA; aerobic ribonucleoside-diphosphate reductase Ia, B1 protein subunit NrdA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D ACRYA_1966 nrdB; aerobic ribonucleoside-diphosphate reductase Ia, B2 protein subunit NrdB K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D ACRYA_1980 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D ACRYA_0696 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D ACRYA_2037 thy; thymidylate synthase complementing protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:acre00250] D ACRYA_0915 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ACRYA_0912 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D ACRYA_1604 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D ACRYA_1986 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D ACRYA_0845 carbon-nitrogen hydrolase family protein K13566 NIT2; omega-amidase [EC:3.5.1.3] D ACRYA_1605 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D ACRYA_1154 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D ACRYA_0608 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D ACRYA_1914 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D ACRYA_1964 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D ACRYA_1909 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D ACRYA_1681 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D ACRYA_1367 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ACRYA_0742 carB; carbamoylphosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D ACRYA_1912 carA; carbamoylphosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D ACRYA_1729 purQ; phosphoribosylformylglycinamidine synthase PurLQS, glutaminase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D ACRYA_1525 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D ACRYA_1701 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:acre00260] D ACRYA_1007 lysC; aspartokinase, alpha and beta subunits K00928 lysC; aspartate kinase [EC:2.7.2.4] D ACRYA_0556 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D ACRYA_1962 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D ACRYA_0216 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D ACRYA_0242 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D ACRYA_1171 glyA2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ACRYA_1279 glyA1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ACRYA_0426 pgm; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D ACRYA_0223 serA; alpha-ketoglutarate reductase / D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D ACRYA_1841 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D ACRYA_0724 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ACRYA_0987 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D ACRYA_0247 ilvA; threonine deaminase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D ACRYA_1160 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D ACRYA_1538 trpB1; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D ACRYA_2008 trpB2; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D ACRYA_1895 ectB; diaminobutyrate-2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D ACRYA_1894 ectA; diaminobutanoate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178] D ACRYA_1896 ectC; ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108] C 00270 Cysteine and methionine metabolism [PATH:acre00270] D ACRYA_0693 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D ACRYA_0028 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D ACRYA_1542 metC; cystathionine-beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D ACRYA_1257 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D ACRYA_1886 metH; cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D ACRYA_0359 metE; cobalamin-independent homocysteine transmethylase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D ACRYA_1522 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D ACRYA_1925 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D ACRYA_1606 pfs; multifunctional 5'-methylthioadenosine / S-adenosylhomocysteine nucleosidase / 6-amino-6-deoxyfutalosine hydrolase K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30] D ACRYA_0826 multi-copper polyphenol oxidoreductase laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D ACRYA_0043 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D ACRYA_0047 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D ACRYA_1881 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D ACRYA_0371 acd; 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] D ACRYA_1007 lysC; aspartokinase, alpha and beta subunits K00928 lysC; aspartate kinase [EC:2.7.2.4] D ACRYA_0556 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D ACRYA_1962 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D ACRYA_0740 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D ACRYA_1543 Cys/Met metabolism PLP-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D ACRYA_0026 metY; O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D ACRYA_1888 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ACRYA_0915 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ACRYA_1029 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ACRYA_0223 serA; alpha-ketoglutarate reductase / D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:acre00280] D ACRYA_1888 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ACRYA_0724 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ACRYA_0496 beta-hydroxyacid dehydrogenase, MmsB/GarR family K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:acre00290] D ACRYA_0247 ilvA; threonine deaminase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D ACRYA_1831 leuC; isopropylmalate isomerase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D ACRYA_0802 leuD; isopropylmalate isomerase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D ACRYA_0803 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D ACRYA_0037 als; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ACRYA_0984 ilvI; acetolactate synthase III, valine-sensitive, catalytic (large) subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ACRYA_0983 ilvH; acetolactate synthase III, valine-sensitive, regulatory (small) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D ACRYA_0199 ilvC; acetohydroxy acid isomeroreductase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D ACRYA_1713 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D ACRYA_1888 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ACRYA_1513 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:acre00300] D ACRYA_1962 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D ACRYA_1007 lysC; aspartokinase, alpha and beta subunits K00928 lysC; aspartate kinase [EC:2.7.2.4] D ACRYA_0556 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D ACRYA_0870 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D ACRYA_1702 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D ACRYA_1174 tetrahydrodipicolinate N-succinyltransferase domain-containing protein (N-terminal, middle domains) K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D ACRYA_1019 argDII; N-succinyldiaminopimelate-aminotransferase / acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D ACRYA_1907 argD; N-succinyldiaminopimelate-aminotransferase / acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D ACRYA_1742 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D ACRYA_1021 ddh; meso-diaminopimelate D-dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16] D ACRYA_0364 PLP-dependent aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D ACRYA_1463 murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D ACRYA_0624 murF; D-alanyl-D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation D ACRYA_0724 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis [PATH:acre00220] D ACRYA_1014 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D ACRYA_1154 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D ACRYA_0608 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D ACRYA_1729 purQ; phosphoribosylformylglycinamidine synthase PurLQS, glutaminase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D ACRYA_1367 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ACRYA_0742 carB; carbamoylphosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D ACRYA_1912 carA; carbamoylphosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D ACRYA_1681 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D ACRYA_0915 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ACRYA_0712 acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D ACRYA_0553 argJ; bifunctional ornithine acetyltransferase / N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D ACRYA_0243 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D ACRYA_0902 argCII; N-acetyl-gamma-glutamylphosphate reductase, uncommon form K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D ACRYA_1019 argDII; N-succinyldiaminopimelate-aminotransferase / acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D ACRYA_1907 argD; N-succinyldiaminopimelate-aminotransferase / acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:acre00330] D ACRYA_0694 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D ACRYA_1586 speB; arginase/agmatinase/formiminoglutamate hydrolase, arginase family K01480 speB; agmatinase [EC:3.5.3.11] D ACRYA_1925 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D ACRYA_1429 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D ACRYA_0591 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D ACRYA_1628 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D ACRYA_0848 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D ACRYA_0915 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:acre00340] D ACRYA_0385 hisG(S); ATP phosphoribosyltransferase HisG(S)Z, hetero-octameric short form, catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D ACRYA_1891 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D ACRYA_1506 hisA; N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D ACRYA_1505 hisH; imidazole glycerol phosphate synthase HisFH, HisH subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D ACRYA_1995 hisF; imidazole glycerol phosphate synthase HisFH, HisF subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D ACRYA_0707 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D ACRYA_1744 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ACRYA_1366 hisJ; histidinol-phosphate phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D ACRYA_0389 hisD; histidinal dehydrogenase / histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D ACRYA_0664 aromatic amino acid lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] C 00350 Tyrosine metabolism [PATH:acre00350] D ACRYA_0915 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ACRYA_1744 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00360 Phenylalanine metabolism [PATH:acre00360] D ACRYA_0915 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ACRYA_1744 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ACRYA_0716 DRE-TIM metallolyase superfamily protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00380 Tryptophan metabolism [PATH:acre00380] D ACRYA_0724 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ACRYA_0783 catalase K03781 katE; catalase [EC:1.11.1.6] D ACRYA_1597 katA; catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:acre00400] D ACRYA_1839 aroG; 2-dehydro-3-deoxyphosphoheptonate aldolase (DAHP synthetase, class II) K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D ACRYA_0942 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D ACRYA_1495 aroD; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D ACRYA_0824 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D ACRYA_0388 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D ACRYA_0226 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D ACRYA_1635 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D ACRYA_1281 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D ACRYA_0088 trpG; anthranilate phosphoribosyltransferase / anthranilate synthase component II, TrpG subunit K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D ACRYA_1131 trpD; anthranilate phosphoribosyltransferase / anthranilate synthase component II, TrpD subunit K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D ACRYA_1077 trpF; phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D ACRYA_1068 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D ACRYA_1160 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D ACRYA_1538 trpB1; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D ACRYA_2008 trpB2; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D ACRYA_1743 pheA; chorismate mutase / prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D ACRYA_1086 tyrA; chorismate mutase / prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D ACRYA_0915 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ACRYA_1744 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:acre00410] D ACRYA_1324 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D ACRYA_1850 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:acre00430] D ACRYA_1491 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D ACRYA_1490 ackA1; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D ACRYA_1492 ackA2; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:acre00450] D ACRYA_1543 Cys/Met metabolism PLP-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D ACRYA_1542 metC; cystathionine-beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D ACRYA_1257 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D ACRYA_1886 metH; cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D ACRYA_0359 metE; cobalamin-independent homocysteine transmethylase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D ACRYA_0601 sufS; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D ACRYA_0004 NADPH oxidoreductase, putative flavodoxin quinone reductase FqrB K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D ACRYA_1703 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D ACRYA_0032 cysN; sulfate adenylyltransferase, GTPase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D ACRYA_0031 cysD; sulfate adenylyltransferase, subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D ACRYA_1208 selD; selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D ACRYA_1081 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D ACRYA_1097 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:acre00460] D ACRYA_1604 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D ACRYA_1171 glyA2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ACRYA_1279 glyA1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:acre00470] D ACRYA_1253 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D ACRYA_0622 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ACRYA_a0049 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ACRYA_a0070 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ACRYA_0843 dltA; D-alanine--[D-alanyl carrier protein] ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D ACRYA_1729 purQ; phosphoribosylformylglycinamidine synthase PurLQS, glutaminase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D ACRYA_1682 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D ACRYA_0428 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D ACRYA_1742 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:acre00480] D ACRYA_1536 leucyl aminopeptidase, peptidase M17 family K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D ACRYA_0953 pepD; peptidase D K01270 pepD; dipeptidase D [EC:3.4.13.-] D ACRYA_1028 icd; isocitrate dehydrogenase, monomeric K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D ACRYA_0477 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D ACRYA_1925 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:acre00540] D ACRYA_0101 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D ACRYA_0214 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D ACRYA_0982 lpxD; UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D ACRYA_0610 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D ACRYA_0099 lpxB; lipid A disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D ACRYA_1047 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D ACRYA_1992 kpsF; D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D ACRYA_0510 kdsA; 3-deoxy-D-manno-octulosonate 8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D ACRYA_0708 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D ACRYA_1128 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D ACRYA_0311 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D ACRYA_0529 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D ACRYA_2026 phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D ACRYA_1124 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D ACRYA_0546 gmhA; sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D ACRYA_0547 waaE; D,D-heptose 1-phosphate adenosyltransferase / D,D-heptose 7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D ACRYA_0549 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D ACRYA_0548 waaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D ACRYA_0528 waaC; heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D ACRYA_0545 waaF; heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D ACRYA_0539 heptosyltransferase K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D ACRYA_0536 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:acre00541] D ACRYA_0786 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ACRYA_0781 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D ACRYA_0137 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D ACRYA_0532 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D ACRYA_0763 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D ACRYA_0535 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D ACRYA_0764 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D ACRYA_0533 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D ACRYA_0534 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D ACRYA_0140 TDP-4-keto-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D ACRYA_0760 aminotransferase, DegT/DnrJ/EryC1/StrS family K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1] D ACRYA_0756 bifunctional mannose-6-phosphate isomerase / mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D ACRYA_0758 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D ACRYA_0759 GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D ACRYA_0148 aminotransferase, DegT/DnrJ/EryC1/StrS family K13010 per; perosamine synthetase [EC:2.6.1.102] D ACRYA_0163 glmU; fused N-acetylglucosamine-1-phosphate uridyltransferase and glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D ACRYA_0123 pseB; UDP-N-acetylglucosamine 4,6-dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D ACRYA_0126 pseG; UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranosyl transferase K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57] D ACRYA_0127 pseI; pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97] D ACRYA_0125 pseF; CMP-pseudaminic acid synthetase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81] D ACRYA_1272 dTDP-4-amino-4,6-dideoxygalactose transaminase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] C 00550 Peptidoglycan biosynthesis [PATH:acre00550] D ACRYA_0512 murA; UDP-N-acetylglucosamine enolpyruvoyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D ACRYA_0116 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D ACRYA_0186 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D ACRYA_0428 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D ACRYA_1463 murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D ACRYA_0622 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ACRYA_a0049 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ACRYA_a0070 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ACRYA_0624 murF; D-alanyl-D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D ACRYA_0165 ispU; undecaprenyl diphosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D ACRYA_1362 bacA; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D ACRYA_0427 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D ACRYA_1361 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D ACRYA_0424 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D ACRYA_1238 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D ACRYA_1359 ftsI; cell division protein FtsI / penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D ACRYA_1319 D-alanyl-D-alanine carboxypeptidase, peptidase S11 family K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D ACRYA_1883 D-alanyl-D-alanine carboxypeptidase, peptidase S11 family K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:acre00552] D ACRYA_1362 bacA; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D ACRYA_0843 dltA; D-alanine--[D-alanyl carrier protein] ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D ACRYA_0842 dltB; peptidoglycan:teichoic acid D-alanyltransferase K03739 dltB; membrane protein involved in D-alanine export D ACRYA_0841 dltD; D-alanyl carrier protein:peptidoglycan D-alanyltransferase K03740 dltD; D-alanine transfer protein D ACRYA_0133 putative polysaccharide biosynthesis protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:acre00543] D ACRYA_0144 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D ACRYA_0693 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:acre00730] D ACRYA_1898 thiC; HMP-P synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D ACRYA_0849 thiD; hydroxymethylpyrimidine kinase / phosphohydroxymethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D ACRYA_1403 thiI; tRNA uridine 4-sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D ACRYA_1745 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D ACRYA_1811 thiG; 1-deoxy-D-xylulose 5-phosphate:thiol sulfurtransferase K03149 thiG; thiazole synthase [EC:2.8.1.10] D ACRYA_1871 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D ACRYA_0245 thiamine phosphate synthase (TMP-TENI domain) K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D ACRYA_1520 thiE; thiamine phosphate synthase (TMP-TENI domain) K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D ACRYA_0617 thiL; thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D ACRYA_1260 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D ACRYA_1261 adkII; adenylate kinase (lid-domain-containing Adk) K00939 adk; adenylate kinase [EC:2.7.4.3] D ACRYA_1870 thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:acre00740] D ACRYA_0795 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D ACRYA_1101 ribAB; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase / GTP cyclohydrolase II protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D ACRYA_0221 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D ACRYA_1368 ribH; 6,7-dimethyl-8-ribityllumazine synthase (riboflavin synthase, beta subunit) K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D ACRYA_0105 ribE; 6,7-dimethyl-8-ribityllumazine synthase (riboflavin synthase, alpha subunit) K00793 ribE; riboflavin synthase [EC:2.5.1.9] D ACRYA_0519 ribF; bifunctional riboflavin kinase / FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D ACRYA_1871 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D ACRYA_0698 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:acre00750] D ACRYA_1577 pdxH; pyridoxine 5'-phosphate oxidase / pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D ACRYA_1283 pdxA; 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D ACRYA_1282 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D ACRYA_0242 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:acre00760] D ACRYA_0912 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D ACRYA_0210 nadA; quinolinate synthase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D ACRYA_0211 nadC; quinolinate phosphoribosyltransferase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D ACRYA_1935 umpG; broad specificity 5'(3')-nucleotidase and polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D ACRYA_1737 nadD; nicotinate-mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D ACRYA_1049 nadE; NAD synthetase, NH3-dependent K01916 nadE; NAD+ synthase [EC:6.3.1.5] D ACRYA_1468 pncC; NMN amidohydrolase K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D ACRYA_0301 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:acre00770] D ACRYA_0037 als; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ACRYA_0984 ilvI; acetolactate synthase III, valine-sensitive, catalytic (large) subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ACRYA_0983 ilvH; acetolactate synthase III, valine-sensitive, regulatory (small) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D ACRYA_0199 ilvC; acetohydroxy acid isomeroreductase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D ACRYA_1713 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D ACRYA_1161 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D ACRYA_1850 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D ACRYA_0386 coaX; pantothenate kinase, type III K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D ACRYA_0164 dfp; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D ACRYA_0697 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D ACRYA_1926 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D ACRYA_1848 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D ACRYA_1888 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ACRYA_1324 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:acre00780] D ACRYA_0059 SAM-dependent methyltransferase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D ACRYA_0670 beta-ketoacyl-[acp] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D ACRYA_0231 fabF; beta-ketoacyl-[acp] synthase II (KASII) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D ACRYA_0655 beta-ketoacyl-[acp] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D ACRYA_0130 short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ACRYA_0233 fabG; 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ACRYA_0663 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ACRYA_0100 fabZ; 3-hydroxyacyl-[acp] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D ACRYA_0667 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D ACRYA_1741 fabI; enoyl-[acp] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D ACRYA_1765 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D ACRYA_1642 bioA; adenosylmethionine--8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D ACRYA_0283 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D ACRYA_0120 bioB; biotin synthetase K01012 bioB; biotin synthase [EC:2.8.1.6] D ACRYA_1624 birA; biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:acre00785] D ACRYA_0727 lplA; lipoate--protein ligase A K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181] D ACRYA_0728 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D ACRYA_0724 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ACRYA_0726 aceE; pyruvate dehydrogenase multienzyme complex, E1 component pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ACRYA_0725 aceF; pyruvate dehydrogenase multienzyme complex, E2 component dihydrolipoyl transacetylase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00790 Folate biosynthesis [PATH:acre00790] D ACRYA_0084 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D ACRYA_0309 Nif3-like dinuclear metal center protein, putative GTP cyclohydrolase K22391 E3.5.4.16; GTP cyclohydrolase I [EC:3.5.4.16] D ACRYA_0208 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D ACRYA_1497 folK; 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D ACRYA_1010 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D ACRYA_0407 folC; bifunctional folypolyglutamate synthetase / dihydrofolate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D ACRYA_0795 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D ACRYA_1101 ribAB; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase / GTP cyclohydrolase II protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D ACRYA_1911 branched-chain amino acid aminotransferase, possible 4-amino-4-deoxychorismate lyase PabC K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D ACRYA_0235 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D ACRYA_0234 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D ACRYA_0236 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D ACRYA_0005 queF; 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D ACRYA_0266 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D ACRYA_1938 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D ACRYA_1365 moaE; molybdopterin synthase, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D ACRYA_0947 mogA; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D ACRYA_0993 moeA1; molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D ACRYA_1191 moeA2; molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D ACRYA_1830 mobA; molybdenum cofactor guanylyltransferase protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:acre00670] D ACRYA_1566 folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase / 5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D ACRYA_1171 glyA2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ACRYA_1279 glyA1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ACRYA_2040 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D ACRYA_1644 purH; AICAR transformylase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D ACRYA_1627 fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D ACRYA_1886 metH; cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D ACRYA_2037 thy; thymidylate synthase complementing protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D ACRYA_0827 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D ACRYA_1150 fau; 5-formyltetrahydrofolate cycloligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:acre00860] D ACRYA_1090 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ACRYA_1999 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ACRYA_0392 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D ACRYA_1228 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D ACRYA_0794 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D ACRYA_1685 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D ACRYA_0976 hemD; uroporphyrinogen III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D ACRYA_0558 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D ACRYA_1015 hemN2; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D ACRYA_1989 UPF0093 domain-containing membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D ACRYA_0892 hemH1; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D ACRYA_1451 hemH2; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D ACRYA_1445 cysG; uroporphyrinogen-III (C7)-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D ACRYA_1447 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D ACRYA_1448 putative siroheme decarboxylase K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D ACRYA_1440 cytochrome d1 heme domain protein, putative NirN K24867 nirN; dihydro-heme d1 dehydrogenase C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:acre00130] D ACRYA_1954 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D ACRYA_1652 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D ACRYA_0698 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D ACRYA_1328 ubiE; bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / S-adenosylmethionine:2-DMK methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D ACRYA_1363 mqnA2; 6-amino-6-deoxyfutalosine synthase K11782 mqnA; chorismate dehydratase [EC:4.2.1.151] D ACRYA_1762 menaquinone biosynthesis protein, SCO4494 family K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D ACRYA_1494 metallo-dependent hydrolase, subgroup D K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40] D ACRYA_1606 pfs; multifunctional 5'-methylthioadenosine / S-adenosylhomocysteine nucleosidase / 6-amino-6-deoxyfutalosine hydrolase K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30] D ACRYA_1088 mqnC; dehypoxanthinylfutalosine cyclase K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] D ACRYA_0115 mqnD; 1,4-dihydroxy-6-naphthoate synthase K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:acre00900] D ACRYA_1745 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D ACRYA_1818 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D ACRYA_1900 ispDF; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] D ACRYA_1696 ispE; 4-diphosphocytidyl-2-C-methylerythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D ACRYA_1275 ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D ACRYA_0225 ispH; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D ACRYA_0698 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D ACRYA_1322 ispA; geranyl diphosphate synthase / farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D ACRYA_0391 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D ACRYA_0165 ispU; undecaprenyl diphosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D ACRYA_1798 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products D ACRYA_1223 MBL fold metallohydrolase K05555 actIV; cyclase [EC:4.-.-.-] C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:acre00523] D ACRYA_0532 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D ACRYA_0763 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D ACRYA_0535 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D ACRYA_0764 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D ACRYA_0533 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D ACRYA_0534 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D ACRYA_0535 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D ACRYA_0764 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:acre00332] D ACRYA_1628 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D ACRYA_0848 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:acre00261] D ACRYA_0032 cysN; sulfate adenylyltransferase, GTPase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D ACRYA_0031 cysD; sulfate adenylyltransferase, subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D ACRYA_1007 lysC; aspartokinase, alpha and beta subunits K00928 lysC; aspartate kinase [EC:2.7.2.4] D ACRYA_0556 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D ACRYA_0870 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D ACRYA_1702 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:acre00521] D ACRYA_0787 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D ACRYA_0525 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D ACRYA_1526 suhB; inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D ACRYA_0532 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D ACRYA_0763 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D ACRYA_0535 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D ACRYA_0764 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D ACRYA_0533 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D ACRYA_0534 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:acre00525] D ACRYA_0532 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D ACRYA_0763 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D ACRYA_0535 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D ACRYA_0764 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:acre00401] D ACRYA_1086 tyrA; chorismate mutase / prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D ACRYA_0915 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ACRYA_1744 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D ACRYA_1281 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D ACRYA_0088 trpG; anthranilate phosphoribosyltransferase / anthranilate synthase component II, TrpG subunit K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D ACRYA_1607 fabD; malonyl-CoA-[acp] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D ACRYA_0130 short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ACRYA_0233 fabG; 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ACRYA_0663 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ACRYA_1741 fabI; enoyl-[acp] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D ACRYA_0232 acpP1; acyl carrier protein K02078 acpP; acyl carrier protein D ACRYA_0656 acpP2; acyl carrier protein K02078 acpP; acyl carrier protein D ACRYA_0668 acpP3; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:acre00999] D ACRYA_1522 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D ACRYA_0824 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:acre00362] D ACRYA_0716 DRE-TIM metallolyase superfamily protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D ACRYA_1067 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00627 Aminobenzoate degradation D ACRYA_0698 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation [PATH:acre00622] D ACRYA_1067 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D ACRYA_0716 DRE-TIM metallolyase superfamily protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:acre00621] D ACRYA_1067 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D ACRYA_0716 DRE-TIM metallolyase superfamily protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:acre03020] D ACRYA_0442 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D ACRYA_0443 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D ACRYA_0810 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D ACRYA_1557 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:acre03010] D ACRYA_0224 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D ACRYA_1462 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D ACRYA_0634 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D ACRYA_0809 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D ACRYA_0645 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D ACRYA_0203 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D ACRYA_0299 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D ACRYA_0642 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D ACRYA_1869 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D ACRYA_0627 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D ACRYA_0808 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D ACRYA_0298 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D ACRYA_0807 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D ACRYA_0641 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D ACRYA_0267 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D ACRYA_0314 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D ACRYA_0637 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D ACRYA_0205 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D ACRYA_0632 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D ACRYA_1904 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D ACRYA_1939 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D ACRYA_0439 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D ACRYA_0631 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D ACRYA_0628 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D ACRYA_0629 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D ACRYA_0640 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D ACRYA_0643 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D ACRYA_0441 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D ACRYA_0700 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D ACRYA_0440 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D ACRYA_0438 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D ACRYA_1868 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D ACRYA_0638 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D ACRYA_0646 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D ACRYA_0635 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D ACRYA_0811 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D ACRYA_0644 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D ACRYA_0362 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D ACRYA_1827 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D ACRYA_1631 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D ACRYA_0633 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D ACRYA_0630 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D ACRYA_0639 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D ACRYA_1565 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D ACRYA_1630 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D ACRYA_0551 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D ACRYA_0636 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D ACRYA_1957 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D ACRYA_1675 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D ACRYA_0434 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D ACRYA_1294 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D ACRYA_1826 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D ACRYA_0806 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D ACRYA_0062 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:acre00970] D ACRYA_0064 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ACRYA_0093 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ACRYA_0289 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ACRYA_0563 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ACRYA_0791 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ACRYA_1953 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ACRYA_1808 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ACRYA_0559 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D ACRYA_0560 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D ACRYA_1472 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D ACRYA_1476 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D ACRYA_1716 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D ACRYA_1533 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D ACRYA_1572 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D ACRYA_0744 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ACRYA_1470 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ACRYA_1474 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ACRYA_0432 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ACRYA_1529 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ACRYA_1806 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ACRYA_1809 tRNA-His K14226 tRNA-His; tRNA His D ACRYA_0063 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D ACRYA_0092 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D ACRYA_0288 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D ACRYA_0562 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D ACRYA_0790 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D ACRYA_1714 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ACRYA_1807 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ACRYA_0838 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ACRYA_1038 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ACRYA_1469 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ACRYA_1473 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ACRYA_1531 tRNA-Met K14230 tRNA-Met; tRNA Met D ACRYA_1372 tRNA-Met K14230 tRNA-Met; tRNA Met D ACRYA_1530 tRNA-Met K14230 tRNA-Met; tRNA Met D ACRYA_1534 tRNA-Met K14230 tRNA-Met; tRNA Met D ACRYA_0429 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D ACRYA_1574 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D ACRYA_1810 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D ACRYA_1371 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ACRYA_1715 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ACRYA_0430 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ACRYA_1532 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ACRYA_0435 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D ACRYA_0431 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D ACRYA_1573 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D ACRYA_1471 tRNA-Val K14237 tRNA-Val; tRNA Val D ACRYA_1475 tRNA-Val K14237 tRNA-Val; tRNA Val D ACRYA_1080 selC; tRNA-Sec K14238 tRNA-Sec; tRNA Sec D ACRYA_1090 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ACRYA_1999 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ACRYA_0812 gatA; Glu-tRNA(Gln) amidotransferase, subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D ACRYA_1978 gatB; Glu-tRNA(Gln) amidotransferase, subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D ACRYA_0182 gatC; Glu-tRNA(Gln) amidotransferase, subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D ACRYA_1705 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D ACRYA_0652 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D ACRYA_0308 glyQ; glycyl-tRNA synthetase, alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D ACRYA_0800 glyS; glycyl-tRNA synthetase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D ACRYA_1824 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D ACRYA_0253 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D ACRYA_1081 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D ACRYA_0180 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D ACRYA_1097 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D ACRYA_1627 fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D ACRYA_0583 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D ACRYA_0405 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D ACRYA_1466 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D ACRYA_1278 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D ACRYA_1735 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D ACRYA_0393 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D ACRYA_0695 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D ACRYA_1915 hisZ; ATP phosphoribosyltransferase HisG(S)Z, hetero-octameric short form, regulatory subunit K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D ACRYA_0228 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D ACRYA_0227 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D ACRYA_1559 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D ACRYA_0381 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:acre03060] D ACRYA_0647 secY; preprotein translocase SecYEG, SecY subunit K03076 secY; preprotein translocase subunit SecY D ACRYA_0436 secE; preprotein translocase SecYEG, SecE subunit K03073 secE; preprotein translocase subunit SecE D ACRYA_0058 secG; preprotein translocase SecYEG, SecG subunit K03075 secG; preprotein translocase subunit SecG D ACRYA_0398 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D ACRYA_0399 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D ACRYA_0397 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D ACRYA_1291 oxaA; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D ACRYA_0949 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D ACRYA_0313 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D ACRYA_1148 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D ACRYA_1733 twin arginine translocation system, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA D ACRYA_1734 twin arginine translocation system, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA D ACRYA_1056 tatB; twin arginine translocation system, TatB protein K03117 tatB; sec-independent protein translocase protein TatB D ACRYA_1055 tatC; twin arginine translocation system, TatC protein K03118 tatC; sec-independent protein translocase protein TatC D ACRYA_1567 lepB; leader peptidase (signal peptidase I) K03100 lepB; signal peptidase I [EC:3.4.21.89] D ACRYA_1906 lspA; prolipoprotein signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:acre04122] D ACRYA_1498 mnmA2; tRNA U34 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D ACRYA_1499 mnmA1; tRNA U34 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D ACRYA_1365 moaE; molybdopterin synthase, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D ACRYA_0266 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D ACRYA_1364 moaD; molybdopterin synthase, small subunit K03636 moaD; sulfur-carrier protein D ACRYA_2020 ThiS family protein K03636 moaD; sulfur-carrier protein D ACRYA_1164 FeThRed_B, RHOD domain-containing protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D ACRYA_2019 thiFII; ThiS adenylyltransferase (Rhodanese domain) K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D ACRYA_1938 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D ACRYA_0947 mogA; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D ACRYA_1403 thiI; tRNA uridine 4-sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D ACRYA_1767 thiS; thiamine biosynthesis protein K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:acre03018] D ACRYA_1006 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D ACRYA_0293 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ACRYA_0971 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D ACRYA_0721 DEAD-box ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D ACRYA_0819 DEAD-box ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D ACRYA_0200 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D ACRYA_1983 DEAD-box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D ACRYA_1680 rho; transcription termination factor K03628 rho; transcription termination factor Rho D ACRYA_1151 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D ACRYA_1993 mRNA degradation ribonuclease J1/J2 (metallo-beta-lactamase superfamily) K12574 rnj; ribonuclease J [EC:3.1.-.-] D ACRYA_0172 dnaK; DnaK system heat shock chaperone K04043 dnaK; molecular chaperone DnaK D ACRYA_1320 groEL; 60 kD chaperonin (cpn60) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ACRYA_1427 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D ACRYA_1428 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D ACRYA_1637 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] B B 09124 Replication and repair C 03030 DNA replication [PATH:acre03030] D ACRYA_1076 dnaQ1; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ACRYA_1482 dnaQ2; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ACRYA_1488 dnaQ3; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ACRYA_1934 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D ACRYA_1683 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D ACRYA_1009 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D ACRYA_0202 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D ACRYA_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D ACRYA_1274 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D ACRYA_a0096 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D ACRYA_1632 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D ACRYA_0204 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein D ACRYA_0717 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D ACRYA_0836 ribonuclease H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D ACRYA_1296 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D ACRYA_0815 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:acre03410] D ACRYA_0616 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D ACRYA_0039 ung; uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D ACRYA_0650 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D ACRYA_1402 xth; exodeoxyribonuclease III (exonuclease III) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D ACRYA_0108 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D ACRYA_1930 recJ; single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D ACRYA_0815 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:acre03420] D ACRYA_0411 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D ACRYA_0903 uvrA; UvrABC nucleotide excision repair complex, subunit UvrA K03701 uvrA; excinuclease ABC subunit A D ACRYA_0609 uvrB; UvrABC nucleotide excision repair complex, subunit UvrB K03702 uvrB; excinuclease ABC subunit B D ACRYA_1252 uvrC; UvrABC nucleotide excision repair complex, subunit UvrC K03703 uvrC; excinuclease ABC subunit C D ACRYA_0195 UvrD/REP family helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ACRYA_1209 rep; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ACRYA_1698 UvrD/REP family helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ACRYA_0815 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:acre03430] D ACRYA_1510 mutS; DNA mismatch repair ATPase K03555 mutS; DNA mismatch repair protein MutS D ACRYA_1025 mutS2; DNA mismatch binding protein, MutS2 family K07456 mutS2; DNA mismatch repair protein MutS2 D ACRYA_0195 UvrD/REP family helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ACRYA_1209 rep; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ACRYA_1698 UvrD/REP family helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ACRYA_1327 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D ACRYA_0741 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D ACRYA_1053 DEDDh 3'-5' exonuclease domain family protein K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D ACRYA_1930 recJ; single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D ACRYA_0204 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein D ACRYA_1934 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D ACRYA_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D ACRYA_1683 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D ACRYA_0202 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D ACRYA_1009 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D ACRYA_1076 dnaQ1; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ACRYA_1482 dnaQ2; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ACRYA_1488 dnaQ3; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ACRYA_0815 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D ACRYA_0374 type II DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:acre03440] D ACRYA_1930 recJ; single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D ACRYA_0204 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein D ACRYA_1061 recR; recombination protein K06187 recR; recombination protein RecR D ACRYA_0121 recA; recombinase K03553 recA; recombination protein RecA D ACRYA_0621 ruvA; RuvABC resolvasome, subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D ACRYA_1162 ruvB; RuvABC resolvasome, subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D ACRYA_2041 ruvC; RuvABC resolvasome, subunit RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D ACRYA_0244 addA; AddAB recombination complex, helicase AddA K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D ACRYA_0734 helicase, RecD/TraA family (non-RecBCD) K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D ACRYA_1934 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D ACRYA_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D ACRYA_1683 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D ACRYA_0202 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D ACRYA_1009 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D ACRYA_1076 dnaQ1; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ACRYA_1482 dnaQ2; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ACRYA_1488 dnaQ3; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ACRYA_1175 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:acre02010] D ACRYA_2021 sbp; sulfate ABC transporter, sulfate binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D ACRYA_2016 cysT; sulfate ABC transporter CysATW, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D ACRYA_2015 cysW; sulfate ABC transporter CysATW, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D ACRYA_2014 cysA; sulfate ABC transporter CysATW, ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D ACRYA_1190 tupA; tungsten ABC transporter TupABC, periplasmic tungstate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D ACRYA_1189 tupB; tungsten ABC transporter TupABC, permease protein K05773 tupB; tungstate transport system permease protein D ACRYA_1188 tupC; tungsten ABC transporter TupABC, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D ACRYA_0013 modA; molybdenum ABC transporter ModABC, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D ACRYA_0011 modB; molybdenum ABC transporter ModABC, permease protein K02018 modB; molybdate transport system permease protein D ACRYA_0010 modC; molybdenum ABC transporter ModABC, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D ACRYA_0087 iron(III)/spermidine/putrescine ABC transporter, periplasmic substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D ACRYA_0086 iron(III)/spermidine/putrescine ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein D ACRYA_0085 iron(III)/spermidine/putrescine ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D ACRYA_0856 mlaC; lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaC K07323 mlaC; phospholipid transport system substrate-binding protein D ACRYA_1876 mlaD; lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D ACRYA_1878 mlaE; lipid asymmetry ABC transporter MlaABCDEF, permease component MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D ACRYA_1877 mlaF; lipid asymmetry ABC transporter MlaABCDEF, ATPase component MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D ACRYA_1859 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D ACRYA_1861 pstC; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein D ACRYA_1862 pstA; phosphate ABC transporter, permease protein (DUF3333 domain) K02038 pstA; phosphate transport system permease protein D ACRYA_1863 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D ACRYA_1546 metal ion ABC transporter, periplasmic metal-binding protein K09815 znuA; zinc transport system substrate-binding protein D ACRYA_0577 metal ion ABC transporter, membrane protein K09816 znuB; zinc transport system permease protein D ACRYA_0576 metal ion ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D ACRYA_0501 cbiM; cobalt/nickel ECF transporter CbiMNQO, S component CbiM K02007 cbiM; cobalt/nickel transport system permease protein D ACRYA_0503 cbiQ; cobalt/nickel ECF transporter CbiMNQO, T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D ACRYA_0504 cbiO; cobalt/nickel ECF transporter CbiMNQO, A component, ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein D ACRYA_0500 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein D ACRYA_0502 cbiN; cobalt/nickel ECF transporter CbiMNQO, S component CbiN K16915 cbiL; nickel transport protein D ACRYA_0568 ABC transporter, ATP-binding protein, FtsE/LolD family K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D ACRYA_0167 lptF; lipooligosaccharide transport system, ABC transporter permease component LptF K07091 lptF; lipopolysaccharide export system permease protein D ACRYA_1563 lptG; lipooligosaccharide transport system, ABC transporter permease component LptG K11720 lptG; lipopolysaccharide export system permease protein D ACRYA_1129 lptB; lipooligosaccharide transport system, ABC transporter ATP-binding component LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D ACRYA_1235 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D ACRYA_1234 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D ACRYA_0873 msbA; lipid A export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D ACRYA_0821 type I secretion system ATPase/permease, LssB family K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D ACRYA_1398 type I secretion system ATPase/permease, LssB family K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:acre03070] D ACRYA_1241 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein D ACRYA_1249 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein D ACRYA_1314 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein D ACRYA_0522 type II secretion/transformation system, D protein K02453 gspD; general secretion pathway protein D D ACRYA_a0076 type II secretion/transformation system, D protein K02453 gspD; general secretion pathway protein D D ACRYA_0082 type II secretion/transformation system, F protein K02455 gspF; general secretion pathway protein F D ACRYA_1273 type II secretion/transformation system, G protein K02456 gspG; general secretion pathway protein G D ACRYA_a0084 type II secretion/transformation system, G protein K02456 gspG; general secretion pathway protein G D ACRYA_a0075 type II secretion/transformation system, E protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D ACRYA_0398 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D ACRYA_0399 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D ACRYA_0436 secE; preprotein translocase SecYEG, SecE subunit K03073 secE; preprotein translocase subunit SecE D ACRYA_0058 secG; preprotein translocase SecYEG, SecG subunit K03075 secG; preprotein translocase subunit SecG D ACRYA_0647 secY; preprotein translocase SecYEG, SecY subunit K03076 secY; preprotein translocase subunit SecY D ACRYA_0397 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D ACRYA_1291 oxaA; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D ACRYA_0949 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D ACRYA_1148 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D ACRYA_0313 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D ACRYA_1733 twin arginine translocation system, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA D ACRYA_1734 twin arginine translocation system, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA D ACRYA_1056 tatB; twin arginine translocation system, TatB protein K03117 tatB; sec-independent protein translocase protein TatB D ACRYA_1055 tatC; twin arginine translocation system, TatC protein K03118 tatC; sec-independent protein translocase protein TatC D ACRYA_0749 P-type type IV conjugative transfer system protein TrbJ/VirB5 K03200 virB5; type IV secretion system protein VirB5 D ACRYA_0746 P-type type IV conjugative transfer system protein TrbL/VirB6 K03201 virB6; type IV secretion system protein VirB6 B B 09132 Signal transduction C 02020 Two-component system [PATH:acre02020] D ACRYA_1866 phoB; two-component system response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D ACRYA_1859 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D ACRYA_1712 htrA; periplasmic heat shock serine protease HtrA, Do family K04771 degP; serine protease Do [EC:3.4.21.107] D ACRYA_2005 putative copper/silver efflux system, membrane fusion protein CusB K07798 cusB; membrane fusion protein, copper/silver efflux system D ACRYA_2006 CusA family copper/silver efflux pump K07787 cusA; copper/silver efflux system protein D ACRYA_0158 flaA; flagellin K02406 fliC; flagellin D ACRYA_0159 flaB; flagellin K02406 fliC; flagellin D ACRYA_0675 putative flagellar protein K02406 fliC; flagellin D ACRYA_0403 motA; flagellar motor stator protein K02556 motA; chemotaxis protein MotA D ACRYA_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D ACRYA_0843 dltA; D-alanine--[D-alanyl carrier protein] ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D ACRYA_0842 dltB; peptidoglycan:teichoic acid D-alanyltransferase K03739 dltB; membrane protein involved in D-alanine export D ACRYA_0841 dltD; D-alanyl carrier protein:peptidoglycan D-alanyltransferase K03740 dltD; D-alanine transfer protein D ACRYA_1972 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR D ACRYA_0276 putative CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D ACRYA_0279 putative (3S)-malyl-CoA thioesterase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D ACRYA_1789 glnD; protein-P-II uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D ACRYA_1786 nitrogen regulatory protein P-II, GlnB/GlnK K04751 glnB; nitrogen regulatory protein P-II 1 D ACRYA_1367 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ACRYA_1203 two-component system sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D ACRYA_1343 Cache sensor-containing two-component system histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D ACRYA_0486 hyaC; [Ni-Fe] hydrogenase, cytochrome b subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit D ACRYA_0968 cheR; MCP protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D ACRYA_0023 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0272 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0303 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0354 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0356 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0584 PAS sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0620 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0682 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0814 4HB sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0816 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0865 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0952 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_1139 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_1421 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_1528 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_1801 4HB sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_2017 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_1326 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D ACRYA_0969 cheA; chemotaxis sensory histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D ACRYA_0320 cheY1; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ACRYA_0970 cheY2; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ACRYA_1041 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ACRYA_0966 cheB; MCP protein-glutamate methylesterase (signal receiver domain) K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D ACRYA_0613 cheV; chemotaxis signal transduction protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D ACRYA_1346 TRAP transporter, substrate binding protein, DctP family K11688 dctP; C4-dicarboxylate-binding protein DctP D ACRYA_1345 TRAP transporter, small permease subunit K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D ACRYA_1344 TRAP transporter, large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D ACRYA_0241 petA; ubiquinol cytochrome c oxidoreductase PetABC, [2Fe-2S] subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D ACRYA_0240 petB; ubiquinol cytochrome c oxidoreductase PetABC, cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D ACRYA_0239 petC; ubiquinol cytochrome c oxidoreductase PetABC, membrane-bound cytochrome c subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D ACRYA_1031 cccA1; periplasmic monoheme cytochrome c553 K08738 CYC; cytochrome c D ACRYA_1442 cytochrome c K08738 CYC; cytochrome c D ACRYA_1454 cccA2; periplasmic monoheme cytochrome c553 K08738 CYC; cytochrome c D ACRYA_a0024 putative cytochrome c K08738 CYC; cytochrome c D ACRYA_0569 putative membrane protein K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D ACRYA_1694 ccoN; cytochrome c oxidase CcoNOPQ, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D ACRYA_1693 ccoO; cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D ACRYA_1692 ccoQ; cytochrome c oxidase CcoNOPQ, cbb3-type, subunit IV K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D ACRYA_1691 ccoP; cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D ACRYA_1241 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein D ACRYA_1249 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein D ACRYA_1314 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D ACRYA_0241 petA; ubiquinol cytochrome c oxidoreductase PetABC, [2Fe-2S] subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:acre02024] D ACRYA_1881 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D ACRYA_1281 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D ACRYA_0088 trpG; anthranilate phosphoribosyltransferase / anthranilate synthase component II, TrpG subunit K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D ACRYA_1839 aroG; 2-dehydro-3-deoxyphosphoheptonate aldolase (DAHP synthetase, class II) K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D ACRYA_0795 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D ACRYA_0221 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D ACRYA_0022 RND family efflux system, outer membrane channel protein, TolC family K18139 oprM; outer membrane protein, multidrug efflux system D ACRYA_1872 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ACRYA_1849 dipeptide/oligopeptide/nickel ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D ACRYA_1153 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ACRYA_0425 putative dipeptide/oligopeptide/nickel ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D ACRYA_1452 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D ACRYA_1291 oxaA; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D ACRYA_0436 secE; preprotein translocase SecYEG, SecE subunit K03073 secE; preprotein translocase subunit SecE D ACRYA_0058 secG; preprotein translocase SecYEG, SecG subunit K03075 secG; preprotein translocase subunit SecG D ACRYA_0647 secY; preprotein translocase SecYEG, SecY subunit K03076 secY; preprotein translocase subunit SecY D ACRYA_0397 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D ACRYA_0949 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D ACRYA_1148 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D ACRYA_0313 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:acre02030] D ACRYA_0023 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0272 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0303 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0354 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0356 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0584 PAS sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0620 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0682 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0814 4HB sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0816 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0865 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0952 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_1139 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_1421 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_1528 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_1801 4HB sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_2017 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0969 cheA; chemotaxis sensory histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D ACRYA_1326 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D ACRYA_0320 cheY1; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ACRYA_0970 cheY2; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ACRYA_1041 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ACRYA_1042 cheC; response regulator phosphatase K03410 cheC; chemotaxis protein CheC D ACRYA_0966 cheB; MCP protein-glutamate methylesterase (signal receiver domain) K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D ACRYA_0613 cheV; chemotaxis signal transduction protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D ACRYA_0967 cheD; chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D ACRYA_0968 cheR; MCP protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D ACRYA_0325 fliG; flagellar motor switch C-ring protein FliG K02410 fliG; flagellar motor switch protein FliG D ACRYA_1784 fliM; flagellar motor switch C-ring protein FliM K02416 fliM; flagellar motor switch protein FliM D ACRYA_0327 fliN; flagellar motor switch C-ring protein FliN K02417 fliN; flagellar motor switch protein FliN D ACRYA_0334 fliY; flagellar motor switch C-ring protein FliY K02417 fliN; flagellar motor switch protein FliN D ACRYA_0403 motA; flagellar motor stator protein K02556 motA; chemotaxis protein MotA D ACRYA_0402 motB; flagellar motor stator protein K02557 motB; chemotaxis protein MotB D ACRYA_1854 OmpA domain-containing protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:acre02040] D ACRYA_0341 fliE; flagellar proximal rod protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D ACRYA_0324 fliF; flagellar inner membrane MS-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D ACRYA_0325 fliG; flagellar motor switch C-ring protein FliG K02410 fliG; flagellar motor switch protein FliG D ACRYA_0326 fliH; flagellar export apparatus, cytoplasmic ATPase complex, FliH component K02411 fliH; flagellar assembly protein FliH D ACRYA_0347 fliI; flagellar export apparatus, cytoplasmic ATPase complex, FliI component K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D ACRYA_1778 fliL; flagellar motor-associated protein FliL K02415 fliL; flagellar protein FliL D ACRYA_1784 fliM; flagellar motor switch C-ring protein FliM K02416 fliM; flagellar motor switch protein FliM D ACRYA_0327 fliN; flagellar motor switch C-ring protein FliN K02417 fliN; flagellar motor switch protein FliN D ACRYA_0334 fliY; flagellar motor switch C-ring protein FliY K02417 fliN; flagellar motor switch protein FliN D ACRYA_1239 fliP; flagellar export apparatus, transmembrane gate complex, FliP component K02419 fliP; flagellar biosynthesis protein FliP D ACRYA_1781 fliQ; flagellar export apparatus, transmembrane gate complex, FliQ component K02420 fliQ; flagellar biosynthesis protein FliQ D ACRYA_0344 fliR; flagellar export apparatus, transmembrane gate complex, FliR component K02421 fliR; flagellar biosynthesis protein FliR D ACRYA_0349 flhA; flagellar export apparatus, transmembrane gate complex, FlhA component K02400 flhA; flagellar biosynthesis protein FlhA D ACRYA_0345 flhB; flagellar export apparatus, transmembrane gate complex, FlhB component K02401 flhB; flagellar biosynthesis protein FlhB D ACRYA_0323 flgB; flagellar proximal rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D ACRYA_0342 flgC; flagellar proximal rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D ACRYA_0328 flgD; flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD D ACRYA_0329 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE D ACRYA_0330 flgE2; flagellar hook protein, epsilonproteobacterial variant K02390 flgE; flagellar hook protein FlgE D ACRYA_0322 flgG; flagellar distal rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF D ACRYA_0319 flgF; flagellar distal rod protein FlgF K02392 flgG; flagellar basal-body rod protein FlgG D ACRYA_1776 flgH; flagellar outer membrane L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D ACRYA_1783 flgI; flagellar peptidoglycan-localized P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D ACRYA_0335 putative flagellar rod assembly protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D ACRYA_1775 flgK; proximal flagellar hook-filament junction protein K02396 flgK; flagellar hook-associated protein 1 D ACRYA_0348 flgL; distal flagellar hook-filament junction protein K02397 flgL; flagellar hook-associated protein 3 FlgL D ACRYA_0158 flaA; flagellin K02406 fliC; flagellin D ACRYA_0159 flaB; flagellin K02406 fliC; flagellin D ACRYA_0675 putative flagellar protein K02406 fliC; flagellin D ACRYA_1774 fliD; flagellar filament cap protein K02407 fliD; flagellar hook-associated protein 2 D ACRYA_1773 fliS; flagellar chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D ACRYA_0403 motA; flagellar motor stator protein K02556 motA; chemotaxis protein MotA D ACRYA_0402 motB; flagellar motor stator protein K02557 motB; chemotaxis protein MotB D ACRYA_1854 OmpA domain-containing protein K02557 motB; chemotaxis protein MotB D ACRYA_0801 rpoD; RNA polymerase sigma70 factor K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D ACRYA_0293 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D ACRYA_1886 metH; cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:acre01501] D ACRYA_1135 glycosyl hydrolase, family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D ACRYA_0020 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D ACRYA_1250 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D ACRYA_0021 RND family efflux system, inner membrane transporter, AcrB family K18138 acrB; multidrug efflux pump D ACRYA_1251 RND family efflux system, inner membrane transporter, AcrB family K18138 acrB; multidrug efflux pump D ACRYA_0022 RND family efflux system, outer membrane channel protein, TolC family K18139 oprM; outer membrane protein, multidrug efflux system D ACRYA_1241 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein D ACRYA_1249 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein D ACRYA_1314 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein D ACRYA_0424 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D ACRYA_1238 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D ACRYA_1359 ftsI; cell division protein FtsI / penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:acre01502] D ACRYA_1972 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR D ACRYA_0622 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ACRYA_a0049 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ACRYA_a0070 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ACRYA_1253 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D ACRYA_0624 murF; D-alanyl-D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D ACRYA_0427 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D ACRYA_1361 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:acre01503] D ACRYA_2026 phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D ACRYA_1561 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D ACRYA_1712 htrA; periplasmic heat shock serine protease HtrA, Do family K04771 degP; serine protease Do [EC:3.4.21.107] D ACRYA_0020 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D ACRYA_1250 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D ACRYA_0021 RND family efflux system, inner membrane transporter, AcrB family K18138 acrB; multidrug efflux pump D ACRYA_1251 RND family efflux system, inner membrane transporter, AcrB family K18138 acrB; multidrug efflux pump D ACRYA_1241 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein D ACRYA_1249 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein D ACRYA_1314 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein D ACRYA_0101 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D ACRYA_0843 dltA; D-alanine--[D-alanyl carrier protein] ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D ACRYA_0842 dltB; peptidoglycan:teichoic acid D-alanyltransferase K03739 dltB; membrane protein involved in D-alanine export D ACRYA_0841 dltD; D-alanyl carrier protein:peptidoglycan D-alanyltransferase K03740 dltD; D-alanine transfer protein B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:acre01000] C 01001 Protein kinases [BR:acre01001] D ACRYA_0417 toxin-antitoxin system, toxin component, HipA family K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D ACRYA_0251 cosS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ACRYA_0835 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ACRYA_0862 dccS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ACRYA_1115 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ACRYA_1337 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ACRYA_1710 cprS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ACRYA_2002 two-component system sensor histidine kinase, putative CusS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ACRYA_2035 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ACRYA_a0023 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ACRYA_1203 two-component system sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D ACRYA_1343 Cache sensor-containing two-component system histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D ACRYA_0969 cheA; chemotaxis sensory histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D ACRYA_0678 7TMR-DISM-7TM/7TMR-DISMED2 domain-containing two-component system sensor histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS D ACRYA_a0013 7TMR-DISM-7TM/7TMR-DISMED2 domain-containing signal transduction protein K20971 ladS; two-component system, sensor histidine kinase LadS C 01009 Protein phosphatases and associated proteins [BR:acre01009] D ACRYA_1584 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D ACRYA_1841 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:acre01002] D ACRYA_1906 lspA; prolipoprotein signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D ACRYA_0166 peptidase, A24 family K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D ACRYA_0487 hyaD; [Ni-Fe] hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D ACRYA_0911 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D ACRYA_1750 outer membrane lipoprotein, NlpC/P60 family K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D ACRYA_1701 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D ACRYA_1525 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D ACRYA_1986 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D ACRYA_1933 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D ACRYA_1003 zinc-dependent peptidase, M3 family K01414 prlC; oligopeptidase A [EC:3.4.24.70] D ACRYA_1536 leucyl aminopeptidase, peptidase M17 family K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D ACRYA_0953 pepD; peptidase D K01270 pepD; dipeptidase D [EC:3.4.13.-] D ACRYA_0648 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D ACRYA_1496 pepQ; Xaa-Pro dipeptidase, M24 metallopeptidase family K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D ACRYA_0945 ftsH1; integral membrane ATP-dependent zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D ACRYA_1515 ftsH2; integral membrane ATP-dependent zinc metallopeptidase (extracellular domain) K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D ACRYA_0867 RseP-like zinc metalloprotease, M50 family K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D ACRYA_1712 htrA; periplasmic heat shock serine protease HtrA, Do family K04771 degP; serine protease Do [EC:3.4.21.107] D ACRYA_1319 D-alanyl-D-alanine carboxypeptidase, peptidase S11 family K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D ACRYA_1883 D-alanyl-D-alanine carboxypeptidase, peptidase S11 family K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D ACRYA_1425 clpP; serine protease ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D ACRYA_0593 lon; DNA-binding, ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D ACRYA_1567 lepB; leader peptidase (signal peptidase I) K03100 lepB; signal peptidase I [EC:3.4.21.89] D ACRYA_1726 ctpA; carboxyl-terminal protease family protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D ACRYA_1493 sppA; signal peptide peptidase protease IV K04773 sppA; protease IV [EC:3.4.21.-] D ACRYA_0701 hslV; heat shock protein HslVU, ATP-dependent protease subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D ACRYA_0304 collagenase-like peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-] C 01003 Glycosyltransferases [BR:acre01003] D ACRYA_0424 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D ACRYA_0144 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] C 01005 Lipopolysaccharide biosynthesis proteins [BR:acre01005] D ACRYA_0101 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D ACRYA_0099 lpxB; lipid A disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D ACRYA_0214 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D ACRYA_0982 lpxD; UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D ACRYA_0610 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D ACRYA_1047 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D ACRYA_0529 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D ACRYA_0311 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D ACRYA_1124 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D ACRYA_2026 phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D ACRYA_0510 kdsA; 3-deoxy-D-manno-octulosonate 8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D ACRYA_1128 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D ACRYA_0708 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D ACRYA_1992 kpsF; D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D ACRYA_0528 waaC; heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D ACRYA_0545 waaF; heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D ACRYA_0536 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] D ACRYA_0539 heptosyltransferase K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D ACRYA_0546 gmhA; sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D ACRYA_0549 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D ACRYA_0547 waaE; D,D-heptose 1-phosphate adenosyltransferase / D,D-heptose 7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D ACRYA_0548 waaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:acre01011] D ACRYA_0512 murA; UDP-N-acetylglucosamine enolpyruvoyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D ACRYA_0116 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D ACRYA_0186 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D ACRYA_0428 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D ACRYA_1463 murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D ACRYA_0622 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ACRYA_a0049 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ACRYA_a0070 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ACRYA_1253 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D ACRYA_1682 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D ACRYA_0427 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D ACRYA_1361 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D ACRYA_1362 bacA; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D ACRYA_0874 murJ; lipid II flippase K03980 murJ; putative peptidoglycan lipid II flippase D ACRYA_0424 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D ACRYA_1238 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D ACRYA_1359 ftsI; cell division protein FtsI / penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D ACRYA_1319 D-alanyl-D-alanine carboxypeptidase, peptidase S11 family K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D ACRYA_1883 D-alanyl-D-alanine carboxypeptidase, peptidase S11 family K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D ACRYA_1750 outer membrane lipoprotein, NlpC/P60 family K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D ACRYA_1092 slt; soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D ACRYA_0174 membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D ACRYA_0705 membrane-bound lytic murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D ACRYA_1027 YceG-like protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D ACRYA_0706 rlpA; septal ring lytic transglycosylase K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D ACRYA_1561 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:acre01004] D ACRYA_1607 fabD; malonyl-CoA-[acp] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D ACRYA_1264 3-oxoacyl-[acp] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D ACRYA_1673 fabH; beta-ketoacyl-[acp] synthase III (KASIII) K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D ACRYA_0670 beta-ketoacyl-[acp] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D ACRYA_0231 fabF; beta-ketoacyl-[acp] synthase II (KASII) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D ACRYA_0655 beta-ketoacyl-[acp] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D ACRYA_0130 short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ACRYA_0233 fabG; 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ACRYA_0663 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ACRYA_0100 fabZ; 3-hydroxyacyl-[acp] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D ACRYA_0667 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D ACRYA_1741 fabI; enoyl-[acp] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D ACRYA_0278 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase II (CitE domain) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ACRYA_1674 plsX; acyl phosphate synthase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D ACRYA_0209 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D ACRYA_1731 plsC; 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:acre01008] D ACRYA_1223 MBL fold metallohydrolase K05555 actIV; cyclase [EC:4.-.-.-] C 01006 Prenyltransferases [BR:acre01006] D ACRYA_1322 ispA; geranyl diphosphate synthase / farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D ACRYA_0391 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D ACRYA_0165 ispU; undecaprenyl diphosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D ACRYA_1956 miaA; tRNA(i6A37) synthase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D ACRYA_1954 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:acre01007] D ACRYA_1090 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ACRYA_1999 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ACRYA_1559 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D ACRYA_0381 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D ACRYA_0180 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D ACRYA_1735 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D ACRYA_1097 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D ACRYA_1466 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D ACRYA_0583 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D ACRYA_0405 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D ACRYA_1278 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D ACRYA_0652 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D ACRYA_0695 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D ACRYA_1915 hisZ; ATP phosphoribosyltransferase HisG(S)Z, hetero-octameric short form, regulatory subunit K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D ACRYA_0308 glyQ; glycyl-tRNA synthetase, alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D ACRYA_0800 glyS; glycyl-tRNA synthetase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D ACRYA_0253 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D ACRYA_0393 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D ACRYA_1824 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D ACRYA_1705 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D ACRYA_0228 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D ACRYA_0227 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D ACRYA_0915 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ACRYA_1961 aspartate aminotransferase, class I and II aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D ACRYA_1744 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ACRYA_1765 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D ACRYA_1257 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D ACRYA_1019 argDII; N-succinyldiaminopimelate-aminotransferase / acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D ACRYA_1907 argD; N-succinyldiaminopimelate-aminotransferase / acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D ACRYA_1895 ectB; diaminobutyrate-2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D ACRYA_1642 bioA; adenosylmethionine--8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D ACRYA_1228 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D ACRYA_1888 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ACRYA_1272 dTDP-4-amino-4,6-dideoxygalactose transaminase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D ACRYA_0140 TDP-4-keto-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D ACRYA_0148 aminotransferase, DegT/DnrJ/EryC1/StrS family K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:acre00194] D ACRYA_1615 atpC; ATP synthase, F1 complex, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D ACRYA_1616 atpD; ATP synthase, F1 complex, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D ACRYA_1617 atpG; ATP synthase, F1 complex, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D ACRYA_1618 atpA; ATP synthase, F1 complex, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D ACRYA_1619 atpH; ATP synthase, F1 complex, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D ACRYA_1620 atpF; ATP synthase, F0 complex, b subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D ACRYA_1621 atpF'; ATP synthase, F0 complex, b' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D ACRYA_1351 atpE; ATP synthase, F0 complex, c subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D ACRYA_0246 atpB; ATP synthase, F0 complex, a subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:acre03000] D ACRYA_0043 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D ACRYA_0047 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D ACRYA_0365 transcriptional regulator, AraC family (GyrI domain) K13652 K13652; AraC family transcriptional regulator D ACRYA_1803 transcriptional regulator, AraC family (GyrI domain) K13652 K13652; AraC family transcriptional regulator D ACRYA_1172 ada; O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D ACRYA_1699 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D ACRYA_1045 hspR; heat shock transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D ACRYA_1893 ectR; transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D ACRYA_1155 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D ACRYA_0876 perR; peroxide stress transcriptional regulator PerR K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D ACRYA_0268 transcriptional regulator, IscR/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D ACRYA_0027 iscR; transcriptional regulator, IscR/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D ACRYA_1792 arsR; transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D ACRYA_a0021 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D ACRYA_1624 birA; biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D ACRYA_0448 putative toxin-antitoxin system antitoxin component K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D ACRYA_0014 modE; transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein D ACRYA_1193 transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein D ACRYA_1622 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ACRYA_a0098 partitioning protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ACRYA_0170 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor D ACRYA_1870 thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D ACRYA_0450 hypothetical protein K07733 alpA; prophage regulatory protein D ACRYA_1722 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor C 03021 Transcription machinery [BR:acre03021] D ACRYA_0810 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D ACRYA_0442 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D ACRYA_0443 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D ACRYA_1557 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D ACRYA_0801 rpoD; RNA polymerase sigma70 factor K03086 rpoD; RNA polymerase primary sigma factor D ACRYA_0179 nusA; transcription termination factor K02600 nusA; transcription termination/antitermination protein NusA D ACRYA_1369 nusB; transcription antitermination protein K03625 nusB; transcription antitermination protein NusB D ACRYA_0437 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG D ACRYA_1722 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D ACRYA_0611 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D ACRYA_1680 rho; transcription termination factor K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:acre03019] D ACRYA_1634 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D ACRYA_1993 mRNA degradation ribonuclease J1/J2 (metallo-beta-lactamase superfamily) K12574 rnj; ribonuclease J [EC:3.1.-.-] D ACRYA_1151 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D ACRYA_0200 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D ACRYA_0721 DEAD-box ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D ACRYA_0819 DEAD-box ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D ACRYA_1983 DEAD-box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D ACRYA_0293 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ACRYA_0971 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D ACRYA_1680 rho; transcription termination factor K03628 rho; transcription termination factor Rho D ACRYA_0172 dnaK; DnaK system heat shock chaperone K04043 dnaK; molecular chaperone DnaK D ACRYA_1320 groEL; 60 kD chaperonin (cpn60) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ACRYA_1427 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D ACRYA_1428 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D ACRYA_1637 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D ACRYA_1006 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] C 03041 Spliceosome C 03011 Ribosome [BR:acre03011] D ACRYA_0224 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D ACRYA_1462 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D ACRYA_0634 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D ACRYA_0809 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D ACRYA_0645 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D ACRYA_0203 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D ACRYA_0299 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D ACRYA_0642 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D ACRYA_1869 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D ACRYA_0627 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D ACRYA_0808 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D ACRYA_0298 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D ACRYA_0807 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D ACRYA_0641 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D ACRYA_0267 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D ACRYA_0314 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D ACRYA_0637 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D ACRYA_0205 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D ACRYA_0632 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D ACRYA_1904 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D ACRYA_1939 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D ACRYA_0439 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D ACRYA_0631 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D ACRYA_0628 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D ACRYA_0629 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D ACRYA_0640 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D ACRYA_0643 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D ACRYA_0700 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D ACRYA_0440 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D ACRYA_0438 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D ACRYA_0441 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D ACRYA_1868 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D ACRYA_0638 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D ACRYA_0646 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D ACRYA_0635 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D ACRYA_0811 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D ACRYA_0644 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D ACRYA_0362 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D ACRYA_1827 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D ACRYA_1631 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D ACRYA_0633 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D ACRYA_0630 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D ACRYA_0639 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D ACRYA_1630 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D ACRYA_0551 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D ACRYA_0636 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D ACRYA_1957 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D ACRYA_1675 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D ACRYA_0434 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D ACRYA_1294 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D ACRYA_1826 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D ACRYA_0806 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D ACRYA_1565 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D ACRYA_0062 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA C 03009 Ribosome biogenesis [BR:acre03009] D ACRYA_1634 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D ACRYA_0067 era; GTP-binding protein K03595 era; GTPase D ACRYA_1629 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D ACRYA_1722 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D ACRYA_0179 nusA; transcription termination factor K02600 nusA; transcription termination/antitermination protein NusA D ACRYA_1369 nusB; transcription antitermination protein K03625 nusB; transcription antitermination protein NusB D ACRYA_0437 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG D ACRYA_0930 RsuA-like pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D ACRYA_1994 rsmA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D ACRYA_0238 rsmE; 16S rRNA m3U1498 methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D ACRYA_0796 rsmG; 16S rRNA m7G527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D ACRYA_1035 rsmH; 16S rRNA m4C1402 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D ACRYA_1958 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D ACRYA_0520 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D ACRYA_1959 rRNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D ACRYA_1519 SPOUT methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D ACRYA_0921 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D ACRYA_1998 rlmN; 23S rRNA m2A2503 methyltransferase / tRNA m2A37 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D ACRYA_1991 rluB; 23S rRNA pseudouridine 2605 synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D ACRYA_0312 rluA; 23S rRNA and tRNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D ACRYA_1231 rluD; 23S rRNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D ACRYA_1963 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D ACRYA_1756 rimK; ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D ACRYA_0316 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM D ACRYA_1852 radical SAM methylthiotransferase, MiaB/RimO family K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D ACRYA_1173 YcaO domain-containing protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D ACRYA_1516 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D ACRYA_1843 Holliday junction resolvase-like protein (UPF0081 domain) K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D ACRYA_1580 DEAD-box ATP-dependent RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D ACRYA_1983 DEAD-box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D ACRYA_0978 engA; GTP-binding protein K03977 engA; GTPase D ACRYA_1558 spoT; ppGpp synthetase / guanosine-3',5'-bis(diphosphate) 3' pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D ACRYA_0219 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D ACRYA_0220 DUF150 domain-containing protein K09748 rimP; ribosome maturation factor RimP D ACRYA_1736 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D ACRYA_0877 ybeY; rRNA maturation RNase K07042 ybeY; probable rRNA maturation factor D ACRYA_0979 raiA; translation inhibitor protein RaiA K05808 hpf; ribosome hibernation promoting factor D ACRYA_0685 ychF; GTP-binding protein, putative GTP-dependent translation factor K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:acre03016] D ACRYA_0395 cca; multifunctional tRNA nucleotidyl transferase / 2'3'-cyclic phosphodiesterase / 2'nucleotidase / phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D ACRYA_1090 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ACRYA_1999 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ACRYA_0393 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D ACRYA_1466 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D ACRYA_0405 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D ACRYA_1097 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D ACRYA_1735 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D ACRYA_1278 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D ACRYA_0652 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D ACRYA_1705 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D ACRYA_1824 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D ACRYA_0253 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D ACRYA_0180 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D ACRYA_0583 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D ACRYA_0695 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D ACRYA_1915 hisZ; ATP phosphoribosyltransferase HisG(S)Z, hetero-octameric short form, regulatory subunit K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D ACRYA_0228 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D ACRYA_0227 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D ACRYA_1559 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D ACRYA_0381 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D ACRYA_0229 histidine triad nucleotide-binding protein, Hint/PKCI branch K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D ACRYA_1233 trmI; tRNA m7G46 methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D ACRYA_0168 truA; tRNA pseudouridine(38-40) synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D ACRYA_1697 truB; tRNA pseudouridine 55 synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D ACRYA_0618 truD; tRNA pseudouridine 13 synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D ACRYA_1723 tRNA pseudouridine 13 synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D ACRYA_1956 miaA; tRNA(i6A37) synthase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D ACRYA_1289 mnmE; 5-carboxymethylaminomethyluridine-tRNA synthase MnmEG, GTPase component K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D ACRYA_0106 mnmG; 5-carboxymethylaminomethyluridine-tRNA synthase MnmEG, MnmG component K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D ACRYA_1208 selD; selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D ACRYA_1293 rnpA; ribonuclease P, protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D ACRYA_0308 glyQ; glycyl-tRNA synthetase, alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D ACRYA_0800 glyS; glycyl-tRNA synthetase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D ACRYA_1589 ybaK; cysteinyl-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D ACRYA_1517 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D ACRYA_0177 miaB; isopentenyl-adenosine A37 tRNA methylthiolase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D ACRYA_0518 cmoA; carboxy-S-adenosyl-L-methionine synthase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D ACRYA_0956 cmoB; tRNA (cmo5U34)-carboxymethyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D ACRYA_0160 trmA; tRNA m5U54 methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D ACRYA_0361 trmD; tRNA m1G37 methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D ACRYA_0828 rRNA methylase, SpoU family K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D ACRYA_1071 yfiC; tRNA m6A37 methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D ACRYA_1498 mnmA2; tRNA U34 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D ACRYA_1499 mnmA1; tRNA U34 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D ACRYA_0991 ttcA; tRNA cytosine32 2-sulfurtransferase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D ACRYA_1040 FAD-dependent oxidoreductase, possible FAD-dependent cmnm(5)s(2)U34 oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D ACRYA_1054 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D ACRYA_0236 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D ACRYA_0235 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D ACRYA_0234 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D ACRYA_0005 queF; 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D ACRYA_0098 DUF208 domain-containing protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D ACRYA_0183 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D ACRYA_1403 thiI; tRNA uridine 4-sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D ACRYA_1853 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D ACRYA_0215 tsaB; N6-L-threonylcarbamoyladenine synthase, TsaB subunit K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D ACRYA_1815 tsaD; N6-L-threonylcarbamoyladenine synthase, TsaD subunit K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D ACRYA_1130 tsaE; N6-L-threonylcarbamoyladenine synthase, TsaE subunit K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D ACRYA_0612 tcdA; tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D ACRYA_0200 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D ACRYA_0971 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:acre03012] D ACRYA_1814 eIF1/SUI1 family translation initiation factor K03113 EIF1; translation initiation factor 1 D ACRYA_0218 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D ACRYA_1825 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D ACRYA_0729 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D ACRYA_1461 tsf; translation elongation factor EF-Ts K02357 tsf; elongation factor Ts D ACRYA_0433 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D ACRYA_0300 fusA; translation elongation factor EF-G K02355 fusA; elongation factor G D ACRYA_1082 selB; selenocysteine-specific elongation factor K03833 selB; selenocysteine-specific elongation factor D ACRYA_1903 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D ACRYA_0057 frr; ribosome releasing factor K02838 frr; ribosome recycling factor D ACRYA_1004 hemK; protein-(glutamine-N5) methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D ACRYA_1564 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D ACRYA_0649 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D ACRYA_0222 efp; translation elongation factor EF-P K02356 efp; elongation factor P D ACRYA_0206 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:acre03110] D ACRYA_0285 clpA; ATP-dependent protease specificity component and chaperone K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D ACRYA_1295 clpB; ClpB chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D ACRYA_0102 clpX; ATP-dependent protease specificity component and chaperone K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D ACRYA_0702 hslU; heat shock protein HslVU, ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D ACRYA_1584 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D ACRYA_0172 dnaK; DnaK system heat shock chaperone K04043 dnaK; molecular chaperone DnaK D ACRYA_1320 groEL; 60 kD chaperonin (cpn60) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ACRYA_0964 dnaJ; DnaK system heat shock co-chaperone K03686 dnaJ; molecular chaperone DnaJ D ACRYA_1044 cbpA; co-chaperone-curved DNA binding protein A K05516 cbpA; curved DNA-binding protein D ACRYA_1052 djlA; DnaJ-like membrane chaperone protein K05801 djlA; DnaJ like chaperone protein D ACRYA_0171 grpE; DnaK system nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D ACRYA_2012 heat-shock protein Hsp20 K13993 HSP20; HSP20 family protein D ACRYA_1321 groES; 10 kD chaperonin (cpn10) K04078 groES; chaperonin GroES D ACRYA_1712 htrA; periplasmic heat shock serine protease HtrA, Do family K04771 degP; serine protease Do [EC:3.4.21.107] D ACRYA_0945 ftsH1; integral membrane ATP-dependent zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D ACRYA_1515 ftsH2; integral membrane ATP-dependent zinc metallopeptidase (extracellular domain) K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D ACRYA_0246 atpB; ATP synthase, F0 complex, a subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D ACRYA_1339 CpxP family two-component system-associated protein K06006 cpxP; periplasmic protein CpxP/Spy D ACRYA_2033 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy D ACRYA_a0025 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy D ACRYA_0499 hypA; hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D ACRYA_0492 hypB; hydrogenase nickel insertion protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D ACRYA_1358 ppiB; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D ACRYA_0735 putative periplasmic folding chaperone K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D ACRYA_1608 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D ACRYA_0249 peb4; major antigenic peptide / PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D ACRYA_1441 peptidyl-prolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D ACRYA_0474 thioredoxin K03671 TXN; thioredoxin D ACRYA_1704 trxA; thioredoxin K03671 TXN; thioredoxin D ACRYA_1755 thioredoxin K03671 TXN; thioredoxin D ACRYA_1684 protein disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D ACRYA_1146 thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D ACRYA_1754 dsbD; thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] C 04131 Membrane trafficking [BR:acre04131] D ACRYA_1677 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D ACRYA_1738 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ACRYA_1923 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ACRYA_1768 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40] D ACRYA_1584 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:acre03051] D ACRYA_1584 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:acre03032] D ACRYA_0717 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D ACRYA_0836 ribonuclease H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D ACRYA_0043 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D ACRYA_0047 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D ACRYA_1037 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D ACRYA_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D ACRYA_1274 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D ACRYA_a0096 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D ACRYA_1632 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D ACRYA_0204 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein D ACRYA_1934 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D ACRYA_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D ACRYA_0202 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D ACRYA_1009 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D ACRYA_1076 dnaQ1; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ACRYA_1482 dnaQ2; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ACRYA_1488 dnaQ3; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ACRYA_1683 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D ACRYA_1296 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D ACRYA_0815 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D ACRYA_0374 type II DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D ACRYA_0555 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D ACRYA_0003 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D ACRYA_0117 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:acre03036] D ACRYA_0043 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D ACRYA_0047 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D ACRYA_1634 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D ACRYA_1037 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D ACRYA_1044 cbpA; co-chaperone-curved DNA binding protein A K05516 cbpA; curved DNA-binding protein D ACRYA_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D ACRYA_0035 DNA-binding ferritin-like protein K04047 dps; starvation-inducible DNA-binding protein D ACRYA_0736 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D ACRYA_1234 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D ACRYA_1359 ftsI; cell division protein FtsI / penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D ACRYA_0981 ftsK; DNA segregation ATPase FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D ACRYA_1360 ftsW; cell division protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW D ACRYA_1235 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D ACRYA_0737 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D ACRYA_1561 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D ACRYA_0020 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D ACRYA_1250 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D ACRYA_0103 mrdB; cell wall shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D ACRYA_0104 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D ACRYA_1230 rodA; rod shape-determining protein K05837 rodA; rod shape determining protein RodA D ACRYA_1623 parA; chromosome partitioning protein K03496 parA; chromosome partitioning protein D ACRYA_a0099 partitioning protein, ParA family K03496 parA; chromosome partitioning protein D ACRYA_1622 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ACRYA_a0098 partitioning protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ACRYA_0106 mnmG; 5-carboxymethylaminomethyluridine-tRNA synthase MnmEG, MnmG component K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D ACRYA_0796 rsmG; 16S rRNA m7G527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D ACRYA_0965 xerH; integrase / recombinase K04763 xerD; integrase/recombinase XerD D ACRYA_1413 site-specific tyrosine recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD D ACRYA_a0046 site-specific tyrosine recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD D ACRYA_a0047 site-specific tyrosine recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD D ACRYA_a0072 site-specific tyrosine recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD D ACRYA_1897 mrp; ATP/GTP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D ACRYA_0711 engB; ribosome biogenesis GTP-binding protein YsxC/EngB K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:acre03400] D ACRYA_0896 phrB; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D ACRYA_0039 ung; uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D ACRYA_0616 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D ACRYA_0366 Nudix domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D ACRYA_0852 Nudix domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D ACRYA_1172 ada; O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D ACRYA_0891 deoxyribodipyrimidine photolyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D ACRYA_0650 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D ACRYA_1402 xth; exodeoxyribonuclease III (exonuclease III) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D ACRYA_0108 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D ACRYA_1930 recJ; single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D ACRYA_0815 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D ACRYA_0903 uvrA; UvrABC nucleotide excision repair complex, subunit UvrA K03701 uvrA; excinuclease ABC subunit A D ACRYA_0609 uvrB; UvrABC nucleotide excision repair complex, subunit UvrB K03702 uvrB; excinuclease ABC subunit B D ACRYA_1252 uvrC; UvrABC nucleotide excision repair complex, subunit UvrC K03703 uvrC; excinuclease ABC subunit C D ACRYA_0195 UvrD/REP family helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ACRYA_1209 rep; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ACRYA_1698 UvrD/REP family helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ACRYA_0442 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D ACRYA_0443 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D ACRYA_0810 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D ACRYA_1557 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D ACRYA_0411 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D ACRYA_1510 mutS; DNA mismatch repair ATPase K03555 mutS; DNA mismatch repair protein MutS D ACRYA_1025 mutS2; DNA mismatch binding protein, MutS2 family K07456 mutS2; DNA mismatch repair protein MutS2 D ACRYA_1327 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D ACRYA_0741 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D ACRYA_1053 DEDDh 3'-5' exonuclease domain family protein K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D ACRYA_1934 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D ACRYA_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D ACRYA_0202 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D ACRYA_1009 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D ACRYA_1076 dnaQ1; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ACRYA_1482 dnaQ2; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ACRYA_1488 dnaQ3; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ACRYA_1683 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D ACRYA_0204 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein D ACRYA_0374 type II DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D ACRYA_0244 addA; AddAB recombination complex, helicase AddA K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D ACRYA_0734 helicase, RecD/TraA family (non-RecBCD) K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D ACRYA_0121 recA; recombinase K03553 recA; recombination protein RecA D ACRYA_0621 ruvA; RuvABC resolvasome, subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D ACRYA_1162 ruvB; RuvABC resolvasome, subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D ACRYA_2041 ruvC; RuvABC resolvasome, subunit RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D ACRYA_1175 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D ACRYA_a0002 putative exonuclease SbcCD, C subunit K03546 sbcC; DNA repair protein SbcC/Rad50 D ACRYA_a0001 putative exonuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11 D ACRYA_0879 radA; DNA repair and recombination protein K04485 radA; DNA repair protein RadA/Sms D ACRYA_1061 recR; recombination protein K06187 recR; recombination protein RecR D ACRYA_0302 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D ACRYA_1687 addB; AddAB recombination complex, helicase AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D ACRYA_0555 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D ACRYA_0003 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D ACRYA_0117 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D ACRYA_1037 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D ACRYA_0732 dinP; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D ACRYA_1965 nrdA; aerobic ribonucleoside-diphosphate reductase Ia, B1 protein subunit NrdA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D ACRYA_1966 nrdB; aerobic ribonucleoside-diphosphate reductase Ia, B2 protein subunit NrdB K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D ACRYA_0212 nrnA; nanoRNase / pAp phosphatase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:acre03029] D ACRYA_0240 petB; ubiquinol cytochrome c oxidoreductase PetABC, cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D ACRYA_0218 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D ACRYA_1825 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D ACRYA_1461 tsf; translation elongation factor EF-Ts K02357 tsf; elongation factor Ts D ACRYA_0433 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D ACRYA_0300 fusA; translation elongation factor EF-G K02355 fusA; elongation factor G D ACRYA_0161 HELICc and SUV3_C domain-containing protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6] D ACRYA_0067 era; GTP-binding protein K03595 era; GTPase D ACRYA_1559 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D ACRYA_0405 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D ACRYA_0652 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D ACRYA_1735 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D ACRYA_0812 gatA; Glu-tRNA(Gln) amidotransferase, subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D ACRYA_1978 gatB; Glu-tRNA(Gln) amidotransferase, subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D ACRYA_0182 gatC; Glu-tRNA(Gln) amidotransferase, subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D ACRYA_0204 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein D ACRYA_0422 putative autotransporter secretion outer membrane protein TamA K07277 SAM50; outer membrane protein insertion porin family D ACRYA_1087 beta-barrel assembly machinery complex, BamA/YaeT protein K07277 SAM50; outer membrane protein insertion porin family D ACRYA_0172 dnaK; DnaK system heat shock chaperone K04043 dnaK; molecular chaperone DnaK D ACRYA_0171 grpE; DnaK system nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D ACRYA_1320 groEL; 60 kD chaperonin (cpn60) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ACRYA_1321 groES; 10 kD chaperonin (cpn10) K04078 groES; chaperonin GroES D ACRYA_0964 dnaJ; DnaK system heat shock co-chaperone K03686 dnaJ; molecular chaperone DnaJ D ACRYA_1897 mrp; ATP/GTP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D ACRYA_1291 oxaA; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D ACRYA_1584 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:acre02000] D ACRYA_0873 msbA; lipid A export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D ACRYA_0762 ABC transporter, ATP-binding/permease components K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-] D ACRYA_0821 type I secretion system ATPase/permease, LssB family K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D ACRYA_1398 type I secretion system ATPase/permease, LssB family K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D ACRYA_0859 ABC transporter, ATP-binding/permease components K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial D ACRYA_1062 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D ACRYA_2021 sbp; sulfate ABC transporter, sulfate binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D ACRYA_2016 cysT; sulfate ABC transporter CysATW, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D ACRYA_2015 cysW; sulfate ABC transporter CysATW, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D ACRYA_2014 cysA; sulfate ABC transporter CysATW, ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D ACRYA_0013 modA; molybdenum ABC transporter ModABC, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D ACRYA_0011 modB; molybdenum ABC transporter ModABC, permease protein K02018 modB; molybdate transport system permease protein D ACRYA_0010 modC; molybdenum ABC transporter ModABC, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D ACRYA_1190 tupA; tungsten ABC transporter TupABC, periplasmic tungstate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D ACRYA_1189 tupB; tungsten ABC transporter TupABC, permease protein K05773 tupB; tungstate transport system permease protein D ACRYA_1188 tupC; tungsten ABC transporter TupABC, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D ACRYA_0087 iron(III)/spermidine/putrescine ABC transporter, periplasmic substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D ACRYA_0086 iron(III)/spermidine/putrescine ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein D ACRYA_0085 iron(III)/spermidine/putrescine ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D ACRYA_0357 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D ACRYA_1350 nitrate/sulfonate/bicarbonate ABC transporter, periplasmic substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D ACRYA_1347 nitrate/sulfonate/bicarbonate ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein D ACRYA_1348 nitrate/sulfonate/bicarbonate ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D ACRYA_1876 mlaD; lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D ACRYA_1878 mlaE; lipid asymmetry ABC transporter MlaABCDEF, permease component MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D ACRYA_1877 mlaF; lipid asymmetry ABC transporter MlaABCDEF, ATPase component MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D ACRYA_1875 putative lipid asymmetry ABC transporter MlaABCDEF component MlaB K18480 linN; cholesterol transport system auxiliary component D ACRYA_0856 mlaC; lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaC K07323 mlaC; phospholipid transport system substrate-binding protein D ACRYA_1859 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D ACRYA_1861 pstC; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein D ACRYA_1862 pstA; phosphate ABC transporter, permease protein (DUF3333 domain) K02038 pstA; phosphate transport system permease protein D ACRYA_1863 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D ACRYA_1872 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ACRYA_1849 dipeptide/oligopeptide/nickel ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D ACRYA_1153 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ACRYA_0425 putative dipeptide/oligopeptide/nickel ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D ACRYA_1452 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D ACRYA_1022 ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D ACRYA_0936 iron siderophore ABC transporter, periplasmic substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein D ACRYA_0938 iron siderophore ABC transporter, permease protein K25027 btuC; cobalamin transport system permease protein D ACRYA_0937 iron siderophore ABC transporter, ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D ACRYA_1546 metal ion ABC transporter, periplasmic metal-binding protein K09815 znuA; zinc transport system substrate-binding protein D ACRYA_0577 metal ion ABC transporter, membrane protein K09816 znuB; zinc transport system permease protein D ACRYA_0576 metal ion ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D ACRYA_0503 cbiQ; cobalt/nickel ECF transporter CbiMNQO, T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D ACRYA_0501 cbiM; cobalt/nickel ECF transporter CbiMNQO, S component CbiM K02007 cbiM; cobalt/nickel transport system permease protein D ACRYA_0504 cbiO; cobalt/nickel ECF transporter CbiMNQO, A component, ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein D ACRYA_0500 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein D ACRYA_0502 cbiN; cobalt/nickel ECF transporter CbiMNQO, S component CbiN K16915 cbiL; nickel transport protein D ACRYA_0167 lptF; lipooligosaccharide transport system, ABC transporter permease component LptF K07091 lptF; lipopolysaccharide export system permease protein D ACRYA_1563 lptG; lipooligosaccharide transport system, ABC transporter permease component LptG K11720 lptG; lipopolysaccharide export system permease protein D ACRYA_1129 lptB; lipooligosaccharide transport system, ABC transporter ATP-binding component LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D ACRYA_0568 ABC transporter, ATP-binding protein, FtsE/LolD family K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D ACRYA_1235 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D ACRYA_1234 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D ACRYA_0657 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D ACRYA_0658 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D ACRYA_0567 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D ACRYA_0948 lolC; lipoprotein releasing system, transmembrane protein, LolC/E family K02004 ABC.CD.P; putative ABC transport system permease protein D ACRYA_1311 ABC transporter, permease protein, MacB family K02004 ABC.CD.P; putative ABC transport system permease protein D ACRYA_1720 ABC transporter, permease protein, FtsX/LolE family K02004 ABC.CD.P; putative ABC transport system permease protein D ACRYA_1312 ABC transporter, ATP-binding protein, FtsE/LolD family K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D ACRYA_1460 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D ACRYA_1719 ABC transporter, ATP-binding protein, FtsE/LolD family K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D ACRYA_0603 sufC; [Fe-S] cluster assembly scaffold SufBCD, ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D ACRYA_0054 putative major facilitator superfamily transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D ACRYA_0034 drug resistance transporter, Bcr/CflA family K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D ACRYA_0296 major facilitator superfamily transporter K08156 araJ; MFS transporter, DHA1 family, arabinose polymer utilization protein D ACRYA_0350 proton antiporter protein, major facilitator superfamily K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D ACRYA_1747 major facilitator superfamily transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D ACRYA_0552 putative potassium channel protein (TrkA domain) K10716 kch; voltage-gated potassium channel D ACRYA_0382 ion transporter K08714 VGSC; voltage-gated sodium channel D ACRYA_1787 ammonium transporter, marine subtype K03320 amt; ammonium transporter, Amt family D ACRYA_0061 BAX inhibitor (BI)-1 like protein (UPF0005 domain) K19416 yccA; modulator of FtsH protease D ACRYA_0394 mscS; small conductance mechanosensitive channel protein K03442 mscS; small conductance mechanosensitive channel D ACRYA_1601 miniconductance mechanosensitive channel protein K16053 ybdG; miniconductance mechanosensitive channel D ACRYA_a0064 putative membrane protein K22112 amiS; putative amide transporter protein D ACRYA_0403 motA; flagellar motor stator protein K02556 motA; chemotaxis protein MotA D ACRYA_0402 motB; flagellar motor stator protein K02557 motB; chemotaxis protein MotB D ACRYA_1854 OmpA domain-containing protein K02557 motB; chemotaxis protein MotB D ACRYA_0372 exbB1; TonB system transport protein ExbB K03561 exbB; biopolymer transport protein ExbB D ACRYA_1315 exbB2; TonB system transport protein ExbB K03561 exbB; biopolymer transport protein ExbB D ACRYA_1614 tolQ; Tol-Pal system subunit TolQ K03561 exbB; biopolymer transport protein ExbB D ACRYA_0373 exbD1; TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD D ACRYA_1316 exbD2; TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD D ACRYA_1613 tolR; Tol-Pal system subunit TolR K03559 exbD; biopolymer transport protein ExbD D ACRYA_0083 corAI; magnesium and cobalt transport protein K03284 corA; magnesium transporter D ACRYA_0053 zinc transporter (EcCorA_ZntB-like family) K16074 zntB; zinc transporter D ACRYA_1732 crcB; putative fluoride ion transporter K06199 crcB; fluoride exporter D ACRYA_1206 putative mercuric transport protein MerT K08363 merT; mercuric ion transport protein D ACRYA_1205 heavy-metal-associated domain-containing protein, putative mercuric reductase K08364 merP; periplasmic mercuric ion binding protein D ACRYA_1168 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D ACRYA_1024 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D ACRYA_1502 cadF; outer membrane fibronectin-binding protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D ACRYA_1967 OmpA domain-containing protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D ACRYA_0935 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D ACRYA_1270 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D ACRYA_0614 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D ACRYA_1969 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D ACRYA_2004 outer membrane efflux protein, TolC family, putative CusC K15725 czcC; outer membrane protein, heavy metal efflux system D ACRYA_1241 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein D ACRYA_1249 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein D ACRYA_1314 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein D ACRYA_0820 type I secretion system outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system D ACRYA_1399 type I secretion system outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system D ACRYA_0022 RND family efflux system, outer membrane channel protein, TolC family K18139 oprM; outer membrane protein, multidrug efflux system D ACRYA_0422 putative autotransporter secretion outer membrane protein TamA K07277 SAM50; outer membrane protein insertion porin family D ACRYA_1087 beta-barrel assembly machinery complex, BamA/YaeT protein K07277 SAM50; outer membrane protein insertion porin family D ACRYA_0592 beta-barrel assembly machinery complex, BamD/YfiO lipoprotein K05807 bamD; outer membrane protein assembly factor BamD D ACRYA_0423 autotransporter translocation and assembly factor TamB K09800 tamB; translocation and assembly module TamB D ACRYA_0710 lptA; lipooligosaccharide transport system, periplasmic component LptA K09774 lptA; lipopolysaccharide export system protein LptA D ACRYA_0973 lptD; lipooligosaccharide transport system, OM translocon component LptD K04744 lptD; LPS-assembly protein D ACRYA_0252 divalent metal cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D ACRYA_1578 divalent metal cation transporter (ZT_dimer domain) K13283 fieF; ferrous-iron efflux pump FieF D ACRYA_1940 zupT; zinc transporter K07238 TC.ZIP; zinc transporter, ZIP family D ACRYA_2006 CusA family copper/silver efflux pump K07787 cusA; copper/silver efflux system protein D ACRYA_0021 RND family efflux system, inner membrane transporter, AcrB family K18138 acrB; multidrug efflux pump D ACRYA_1251 RND family efflux system, inner membrane transporter, AcrB family K18138 acrB; multidrug efflux pump D ACRYA_1116 QacE family quaternary ammonium compound efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE D ACRYA_0881 calcium:sodium antiporter K07301 yrbG; cation:H+ antiporter D ACRYA_1480 cation:acetate symporter K14393 actP; cation/acetate symporter D ACRYA_1484 actP1; acetate permease K14393 actP; cation/acetate symporter D ACRYA_1486 actP2; acetate permease K14393 actP; cation/acetate symporter D ACRYA_1844 gltS; sodium:glutamate symport carrier protein K03312 gltS; glutamate:Na+ symporter, ESS family D ACRYA_1548 nhaA; sodium:proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family D ACRYA_0922 glutathione-regulated potassium-efflux system protein, KefB/KefC family K03455 KEA1_2_3; K+:H+ antiporter D ACRYA_1017 benzoate:proton symporter BenE K05782 benE; benzoate membrane transport protein D ACRYA_1752 sodium:sulfate symporter family protein K11106 ttdT; L-tartrate/succinate antiporter D ACRYA_1795 chromate transporter K07240 chrA; chromate transporter D ACRYA_0110 sulfate permease K03321 TC.SULP; sulfate permease, SulP family D ACRYA_0380 sulfate permease K03321 TC.SULP; sulfate permease, SulP family D ACRYA_0977 sulfate permease K03321 TC.SULP; sulfate permease, SulP family D ACRYA_1346 TRAP transporter, substrate binding protein, DctP family K11688 dctP; C4-dicarboxylate-binding protein DctP D ACRYA_1345 TRAP transporter, small permease subunit K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D ACRYA_1344 TRAP transporter, large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D ACRYA_0831 sodium:phosphate symporter K03324 yjbB; phosphate:Na+ symporter D ACRYA_1524 sodium:phosphate symporter K03324 yjbB; phosphate:Na+ symporter D ACRYA_1791 arsB; arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein D ACRYA_0874 murJ; lipid II flippase K03980 murJ; putative peptidoglycan lipid II flippase D ACRYA_0784 putative permease K13936 mdcF; malonate transporter and related proteins D ACRYA_0597 putative permease K24180 mleP; malate permease and related proteins D ACRYA_1145 putative permease K24180 mleP; malate permease and related proteins D ACRYA_1625 putative permease K24180 mleP; malate permease and related proteins D ACRYA_1985 permease K24180 mleP; malate permease and related proteins D ACRYA_1509 MarC family membrane protein K05595 marC; multiple antibiotic resistance protein D ACRYA_1360 ftsW; cell division protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW D ACRYA_0378 manganese efflux pump MntP K23242 mntP; manganese efflux pump family protein D ACRYA_1229 TonB domain-containing protein K03832 tonB; periplasmic protein TonB D ACRYA_1317 tonB2; energy transduction protein TonB K03832 tonB; periplasmic protein TonB D ACRYA_1612 tolA; Tol-Pal system subunit TolA K03832 tonB; periplasmic protein TonB D ACRYA_1610 pal; Tol-Pal system peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D ACRYA_1611 tolB; Tol-Pal system translocation protein TolB K03641 tolB; TolB protein D ACRYA_1804 OAD_gamma domain-containing protein K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D ACRYA_1083 molybdopterin-containing oxidoreductase II, DMSO/TMAO/BSO reductase family, catalytic subunit K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D ACRYA_2005 putative copper/silver efflux system, membrane fusion protein CusB K07798 cusB; membrane fusion protein, copper/silver efflux system D ACRYA_0822 type I secretion system membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system D ACRYA_1394 type I secretion system membrane fusion protein, HlyD family (PAS domain) K12542 lapC; membrane fusion protein, adhesin transport system D ACRYA_0020 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D ACRYA_1250 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D ACRYA_1156 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D ACRYA_1157 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B C 02044 Secretion system [BR:acre02044] D ACRYA_1241 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein D ACRYA_1249 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein D ACRYA_1314 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein D ACRYA_0821 type I secretion system ATPase/permease, LssB family K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D ACRYA_1398 type I secretion system ATPase/permease, LssB family K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D ACRYA_0822 type I secretion system membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system D ACRYA_1394 type I secretion system membrane fusion protein, HlyD family (PAS domain) K12542 lapC; membrane fusion protein, adhesin transport system D ACRYA_0820 type I secretion system outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system D ACRYA_1399 type I secretion system outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system D ACRYA_0522 type II secretion/transformation system, D protein K02453 gspD; general secretion pathway protein D D ACRYA_a0076 type II secretion/transformation system, D protein K02453 gspD; general secretion pathway protein D D ACRYA_a0075 type II secretion/transformation system, E protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D ACRYA_0082 type II secretion/transformation system, F protein K02455 gspF; general secretion pathway protein F D ACRYA_1273 type II secretion/transformation system, G protein K02456 gspG; general secretion pathway protein G D ACRYA_a0084 type II secretion/transformation system, G protein K02456 gspG; general secretion pathway protein G D ACRYA_0166 peptidase, A24 family K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D ACRYA_a0082 type II secretion/transformation system, F protein K02653 pilC; type IV pilus assembly protein PilC D ACRYA_1091 YggT family membrane protein K02221 yggT; YggT family protein D ACRYA_0096 competence protein, ComEA family K02237 comEA; competence protein ComEA D ACRYA_0566 competence protein, ComEA family K02237 comEA; competence protein ComEA D ACRYA_1980 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D ACRYA_1119 competence protein, ComEC family K02238 comEC; competence protein ComEC D ACRYA_1504 ctsW; transformation system, predicted amidophosphoribosyltransferase CtsW K02242 comFC; competence protein ComFC D ACRYA_0349 flhA; flagellar export apparatus, transmembrane gate complex, FlhA component K02400 flhA; flagellar biosynthesis protein FlhA D ACRYA_0345 flhB; flagellar export apparatus, transmembrane gate complex, FlhB component K02401 flhB; flagellar biosynthesis protein FlhB D ACRYA_0714 FlhB C-terminus-related protein K04061 flhB2; flagellar biosynthesis protein D ACRYA_0324 fliF; flagellar inner membrane MS-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D ACRYA_0326 fliH; flagellar export apparatus, cytoplasmic ATPase complex, FliH component K02411 fliH; flagellar assembly protein FliH D ACRYA_0347 fliI; flagellar export apparatus, cytoplasmic ATPase complex, FliI component K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D ACRYA_0327 fliN; flagellar motor switch C-ring protein FliN K02417 fliN; flagellar motor switch protein FliN D ACRYA_0334 fliY; flagellar motor switch C-ring protein FliY K02417 fliN; flagellar motor switch protein FliN D ACRYA_1239 fliP; flagellar export apparatus, transmembrane gate complex, FliP component K02419 fliP; flagellar biosynthesis protein FliP D ACRYA_1781 fliQ; flagellar export apparatus, transmembrane gate complex, FliQ component K02420 fliQ; flagellar biosynthesis protein FliQ D ACRYA_0344 fliR; flagellar export apparatus, transmembrane gate complex, FliR component K02421 fliR; flagellar biosynthesis protein FliR D ACRYA_0749 P-type type IV conjugative transfer system protein TrbJ/VirB5 K03200 virB5; type IV secretion system protein VirB5 D ACRYA_0746 P-type type IV conjugative transfer system protein TrbL/VirB6 K03201 virB6; type IV secretion system protein VirB6 D ACRYA_1684 protein disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D ACRYA_1146 thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D ACRYA_0949 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D ACRYA_0398 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D ACRYA_0436 secE; preprotein translocase SecYEG, SecE subunit K03073 secE; preprotein translocase subunit SecE D ACRYA_0399 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D ACRYA_0058 secG; preprotein translocase SecYEG, SecG subunit K03075 secG; preprotein translocase subunit SecG D ACRYA_0647 secY; preprotein translocase SecYEG, SecY subunit K03076 secY; preprotein translocase subunit SecY D ACRYA_0313 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D ACRYA_1148 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D ACRYA_0397 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D ACRYA_1291 oxaA; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D ACRYA_1733 twin arginine translocation system, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA D ACRYA_1734 twin arginine translocation system, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA D ACRYA_1056 tatB; twin arginine translocation system, TatB protein K03117 tatB; sec-independent protein translocase protein TatB D ACRYA_1055 tatC; twin arginine translocation system, TatC protein K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:acre02042] D ACRYA_1168 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D ACRYA_1024 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:acre02022] D ACRYA_1866 phoB; two-component system response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D ACRYA_1972 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR D ACRYA_0251 cosS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ACRYA_0835 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ACRYA_0862 dccS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ACRYA_1115 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ACRYA_1337 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ACRYA_1710 cprS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ACRYA_2002 two-component system sensor histidine kinase, putative CusS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ACRYA_2035 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ACRYA_a0023 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ACRYA_0250 cosR; two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D ACRYA_0861 dccR; two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D ACRYA_1114 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D ACRYA_1338 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D ACRYA_1711 cprR; two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D ACRYA_2001 two-component system response regulator, putative CusR K02483 K02483; two-component system, OmpR family, response regulator D ACRYA_2034 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D ACRYA_0885 two-component system response regulator, LytR/AlgR family K02477 K02477; two-component system, LytTR family, response regulator D ACRYA_1203 two-component system sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D ACRYA_1343 Cache sensor-containing two-component system histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D ACRYA_0969 cheA; chemotaxis sensory histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D ACRYA_0320 cheY1; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ACRYA_0970 cheY2; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ACRYA_1041 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ACRYA_0966 cheB; MCP protein-glutamate methylesterase (signal receiver domain) K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D ACRYA_0613 cheV; chemotaxis signal transduction protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D ACRYA_0678 7TMR-DISM-7TM/7TMR-DISMED2 domain-containing two-component system sensor histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS D ACRYA_a0013 7TMR-DISM-7TM/7TMR-DISMED2 domain-containing signal transduction protein K20971 ladS; two-component system, sensor histidine kinase LadS C 02035 Bacterial motility proteins [BR:acre02035] D ACRYA_0969 cheA; chemotaxis sensory histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D ACRYA_1326 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D ACRYA_1042 cheC; response regulator phosphatase K03410 cheC; chemotaxis protein CheC D ACRYA_0967 cheD; chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D ACRYA_0968 cheR; MCP protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D ACRYA_0966 cheB; MCP protein-glutamate methylesterase (signal receiver domain) K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D ACRYA_0320 cheY1; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ACRYA_0970 cheY2; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ACRYA_1041 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ACRYA_0613 cheV; chemotaxis signal transduction protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D ACRYA_0023 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0272 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0303 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0354 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0356 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0584 PAS sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0620 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0682 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0814 4HB sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0816 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0865 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0952 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_1139 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_1421 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_1528 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_1801 4HB sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_2017 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein D ACRYA_0326 fliH; flagellar export apparatus, cytoplasmic ATPase complex, FliH component K02411 fliH; flagellar assembly protein FliH D ACRYA_0347 fliI; flagellar export apparatus, cytoplasmic ATPase complex, FliI component K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D ACRYA_1239 fliP; flagellar export apparatus, transmembrane gate complex, FliP component K02419 fliP; flagellar biosynthesis protein FliP D ACRYA_1781 fliQ; flagellar export apparatus, transmembrane gate complex, FliQ component K02420 fliQ; flagellar biosynthesis protein FliQ D ACRYA_0344 fliR; flagellar export apparatus, transmembrane gate complex, FliR component K02421 fliR; flagellar biosynthesis protein FliR D ACRYA_0349 flhA; flagellar export apparatus, transmembrane gate complex, FlhA component K02400 flhA; flagellar biosynthesis protein FlhA D ACRYA_0345 flhB; flagellar export apparatus, transmembrane gate complex, FlhB component K02401 flhB; flagellar biosynthesis protein FlhB D ACRYA_0325 fliG; flagellar motor switch C-ring protein FliG K02410 fliG; flagellar motor switch protein FliG D ACRYA_1784 fliM; flagellar motor switch C-ring protein FliM K02416 fliM; flagellar motor switch protein FliM D ACRYA_0327 fliN; flagellar motor switch C-ring protein FliN K02417 fliN; flagellar motor switch protein FliN D ACRYA_0334 fliY; flagellar motor switch C-ring protein FliY K02417 fliN; flagellar motor switch protein FliN D ACRYA_0324 fliF; flagellar inner membrane MS-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D ACRYA_1783 flgI; flagellar peptidoglycan-localized P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D ACRYA_1776 flgH; flagellar outer membrane L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D ACRYA_1778 fliL; flagellar motor-associated protein FliL K02415 fliL; flagellar protein FliL D ACRYA_0341 fliE; flagellar proximal rod protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D ACRYA_0323 flgB; flagellar proximal rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D ACRYA_0342 flgC; flagellar proximal rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D ACRYA_0328 flgD; flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD D ACRYA_0322 flgG; flagellar distal rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF D ACRYA_0319 flgF; flagellar distal rod protein FlgF K02392 flgG; flagellar basal-body rod protein FlgG D ACRYA_0335 putative flagellar rod assembly protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D ACRYA_0329 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE D ACRYA_0330 flgE2; flagellar hook protein, epsilonproteobacterial variant K02390 flgE; flagellar hook protein FlgE D ACRYA_1775 flgK; proximal flagellar hook-filament junction protein K02396 flgK; flagellar hook-associated protein 1 D ACRYA_0348 flgL; distal flagellar hook-filament junction protein K02397 flgL; flagellar hook-associated protein 3 FlgL D ACRYA_0158 flaA; flagellin K02406 fliC; flagellin D ACRYA_0159 flaB; flagellin K02406 fliC; flagellin D ACRYA_0675 putative flagellar protein K02406 fliC; flagellin D ACRYA_1774 fliD; flagellar filament cap protein K02407 fliD; flagellar hook-associated protein 2 D ACRYA_1773 fliS; flagellar chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D ACRYA_0403 motA; flagellar motor stator protein K02556 motA; chemotaxis protein MotA D ACRYA_0402 motB; flagellar motor stator protein K02557 motB; chemotaxis protein MotB D ACRYA_1854 OmpA domain-containing protein K02557 motB; chemotaxis protein MotB D ACRYA_0201 fliW; putative flagellin level sensor protein FliW K13626 fliW; flagellar assembly factor FliW D ACRYA_0338 flhF; polar flagellar biogenesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D ACRYA_0339 flhG; polar flagellar biogenesis regulatory protein FlhG K04562 flhG; flagellar biosynthesis protein FlhG D ACRYA_a0082 type II secretion/transformation system, F protein K02653 pilC; type IV pilus assembly protein PilC D ACRYA_0166 peptidase, A24 family K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:acre04812] D ACRYA_1433 AmmeMemoRadiSam system protein B K06990 MEMO1; MEMO1 family protein D ACRYA_0103 mrdB; cell wall shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D ACRYA_0737 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D ACRYA_0736 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D ACRYA_1623 parA; chromosome partitioning protein K03496 parA; chromosome partitioning protein D ACRYA_a0099 partitioning protein, ParA family K03496 parA; chromosome partitioning protein D ACRYA_1622 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ACRYA_a0098 partitioning protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:acre04147] D ACRYA_1584 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D ACRYA_0293 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ACRYA_1738 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ACRYA_1923 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ACRYA_1739 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D ACRYA_1768 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40] D ACRYA_0473 ahpC1; alkyl hydroperoxide reductase protein, peroxidase component K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D ACRYA_1679 ahpC2; alkyl hydroperoxide reductase protein, peroxidase component K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D ACRYA_1320 groEL; 60 kD chaperonin (cpn60) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ACRYA_0172 dnaK; DnaK system heat shock chaperone K04043 dnaK; molecular chaperone DnaK D ACRYA_0785 pgi; phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D ACRYA_0813 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D ACRYA_0433 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D ACRYA_0229 histidine triad nucleotide-binding protein, Hint/PKCI branch K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D ACRYA_1260 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D ACRYA_1261 adkII; adenylate kinase (lid-domain-containing Adk) K00939 adk; adenylate kinase [EC:2.7.4.3] D ACRYA_1539 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D ACRYA_0608 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D ACRYA_1154 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D ACRYA_1095 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D ACRYA_1367 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ACRYA_0794 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D ACRYA_0223 serA; alpha-ketoglutarate reductase / D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D ACRYA_1644 purH; AICAR transformylase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D ACRYA_0724 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ACRYA_1740 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D ACRYA_0893 lipocalin domain-containing protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:acre02048] D ACRYA_0897 hsdR; type I restriction/modification system, restriction subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D ACRYA_1415 type I restriction/modification system, specificity subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D ACRYA_1414 type I restriction/modification system, methylation subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D ACRYA_0374 type II DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D ACRYA_0043 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D ACRYA_0047 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D ACRYA_0282 mcrC; type IV methyl-directed restriction system, component McrC K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC D ACRYA_0780 toxin-antitoxin system, toxin component, RelE/ParE family K06218 relE; mRNA interferase RelE/StbE D ACRYA_0779 toxin-antitoxin system, antitoxin component, Phd/YefM family K18923 stbD; antitoxin StbD D ACRYA_1381 toxin-antitoxin system, toxin component, YafQ family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D ACRYA_1380 toxin-antitoxin system, antitoxin component, RelB family K07473 dinJ; DNA-damage-inducible protein J D ACRYA_0417 toxin-antitoxin system, toxin component, HipA family K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D ACRYA_0447 toxin-antitoxin system, toxin component, RelE/ParE family K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D ACRYA_0448 putative toxin-antitoxin system antitoxin component K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D ACRYA_0737 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D ACRYA_0103 mrdB; cell wall shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D ACRYA_1090 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ACRYA_1999 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:acre01504] D ACRYA_0350 proton antiporter protein, major facilitator superfamily K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D ACRYA_1972 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR D ACRYA_0843 dltA; D-alanine--[D-alanyl carrier protein] ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D ACRYA_0842 dltB; peptidoglycan:teichoic acid D-alanyltransferase K03739 dltB; membrane protein involved in D-alanine export D ACRYA_0841 dltD; D-alanyl carrier protein:peptidoglycan D-alanyltransferase K03740 dltD; D-alanine transfer protein D ACRYA_0020 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D ACRYA_1250 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D ACRYA_0021 RND family efflux system, inner membrane transporter, AcrB family K18138 acrB; multidrug efflux pump D ACRYA_1251 RND family efflux system, inner membrane transporter, AcrB family K18138 acrB; multidrug efflux pump D ACRYA_0022 RND family efflux system, outer membrane channel protein, TolC family K18139 oprM; outer membrane protein, multidrug efflux system D ACRYA_1241 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein D ACRYA_1249 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein D ACRYA_1314 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:acre00536] D ACRYA_1309 hemagglutinin domain-containing protein K15125 fhaB; filamentous hemagglutinin C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:acre03100] D ACRYA_0064 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ACRYA_0093 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ACRYA_0289 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ACRYA_0563 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ACRYA_0791 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ACRYA_1953 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ACRYA_1808 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ACRYA_0559 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D ACRYA_0560 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D ACRYA_1472 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D ACRYA_1476 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D ACRYA_1716 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D ACRYA_1533 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D ACRYA_1572 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D ACRYA_0744 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ACRYA_1470 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ACRYA_1474 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ACRYA_0432 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ACRYA_1529 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ACRYA_1806 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ACRYA_1809 tRNA-His K14226 tRNA-His; tRNA His D ACRYA_0063 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D ACRYA_0092 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D ACRYA_0288 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D ACRYA_0562 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D ACRYA_0790 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D ACRYA_1714 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ACRYA_1807 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ACRYA_0838 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ACRYA_1038 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ACRYA_1469 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ACRYA_1473 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ACRYA_1531 tRNA-Met K14230 tRNA-Met; tRNA Met D ACRYA_1372 tRNA-Met K14230 tRNA-Met; tRNA Met D ACRYA_1530 tRNA-Met K14230 tRNA-Met; tRNA Met D ACRYA_1534 tRNA-Met K14230 tRNA-Met; tRNA Met D ACRYA_0429 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D ACRYA_1574 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D ACRYA_1810 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D ACRYA_1371 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ACRYA_1715 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ACRYA_0430 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ACRYA_1532 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ACRYA_0435 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D ACRYA_0431 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D ACRYA_1573 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D ACRYA_1471 tRNA-Val K14237 tRNA-Val; tRNA Val D ACRYA_1475 tRNA-Val K14237 tRNA-Val; tRNA Val D ACRYA_1080 selC; tRNA-Sec K14238 tRNA-Sec; tRNA Sec D ACRYA_0062 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D ACRYA_1430 saccharopine dehydrogenase-like protein K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55] D ACRYA_1144 flavodoxin-like fold domain-containing protein, putative NAD(P)H (quinone) dehydrogenase/reductase K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10] D ACRYA_1112 cytochrome c K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2] D ACRYA_1640 msrAB; bifunctional (RS)-methionine sulfoxide reductase A/B K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D ACRYA_1357 diheme cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D ACRYA_1746 ccpA; periplasmic diheme cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D ACRYA_0517 bcp; thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D ACRYA_0579 tpx; lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D ACRYA_0485 hyaB; [Ni-Fe] hydrogenase, large subunit K05922 hydB; quinone-reactive Ni/Fe-hydrogenase large subunit [EC:1.12.5.1] D ACRYA_0484 hyaA; [Ni-Fe] hydrogenase, small subunit K05927 hydA; quinone-reactive Ni/Fe-hydrogenase small subunit [EC:1.12.5.1] D ACRYA_1921 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D ACRYA_0570 putative membrane protein K21817 blh; beta-carotene 15,15'-dioxygenase [EC:1.13.11.63] D ACRYA_1796 arsC; arsenate reductase, LMWPc family K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D ACRYA_1011 nrdG; anaerobic ribonucleoside triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D ACRYA_0482 cfa; cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D ACRYA_0396 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D ACRYA_0929 aat; leucyl, phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D ACRYA_1159 ate; arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D ACRYA_0538 glycosyltransferase, family 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D ACRYA_1123 lgt; phosphatidylglycerol-prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D ACRYA_0468 RNA-dependent DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D ACRYA_0878 thioesterase K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D ACRYA_0999 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D ACRYA_0939 sixA2; phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D ACRYA_1287 sixA1; phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D ACRYA_1416 DNA-specific endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D ACRYA_a0006 tatD; ssDNA/RNA exonuclease, 3' - 5' specific K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D ACRYA_1424 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D ACRYA_0367 reactive intermediate/imine deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D ACRYA_0757 GDP-mannose mannosylhydrolase K03207 gmm; GDP-mannose mannosyl hydrolase [EC:3.6.1.-] D ACRYA_1816 serine hydrolase family protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D ACRYA_1813 carbohydrate kinase, YjeF-related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D ACRYA_1325 ppiBII; peptidyl-prolyl cis-trans isomerase B (WD40 domain-containing) K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D ACRYA_1540 lig; DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1] D ACRYA_0722 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D ACRYA_1195 fdhD; formate dehydrogenase accessory protein K02379 fdhD; FdhD protein D ACRYA_0605 iscU; [Fe-S] cluster assembly scaffold protein K13819 K13819; NifU-like protein D ACRYA_0256 napD; periplasmic nitrate reductase assembly protein K02570 napD; periplasmic nitrate reductase NapD D ACRYA_0258 napF; ferredoxin-type protein K02572 napF; ferredoxin-type protein NapF D ACRYA_0261 napG; menaquinol dehydrogenase NapGH, periplasmic component NapG K02573 napG; ferredoxin-type protein NapG D ACRYA_0260 napH; menaquinol dehydrogenase NapGH, membrane component NapH K02574 napH; ferredoxin-type protein NapH D ACRYA_1444 cytochrome d1 heme domain protein, putative heme d1 dehydrogenase NirF K19345 nirF; protein NirF C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D ACRYA_0866 type III pyridoxal 5-phosphate (PLP)-dependent enzyme, YggS family K06997 yggS; PLP dependent protein C 99986 Glycan metabolism C 99987 Cofactor metabolism D ACRYA_1443 heme d1 biosynthesis radical SAM protein NirJ K24868 nirJ; heme d1 biosynthesis protein D ACRYA_0888 putative ubiquinone biosynthesis protein kinase K03688 ubiB; ubiquinone biosynthesis protein D ACRYA_1094 mobB; molybdenum cofactor guanylyltransferase protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism D ACRYA_1575 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D ACRYA_1599 putative membrane protein, DoxX family K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D ACRYA_0471 cold shock protein K03704 cspA; cold shock protein D ACRYA_1453 cold shock protein K03704 cspA; cold shock protein D ACRYA_1651 transcriptional accessory protein Tex K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D ACRYA_1851 META domain-containing protein K03668 hslJ; heat shock protein HslJ D ACRYA_0284 clpS; ClpAP chaperone-protease complex specificity factor K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D ACRYA_1426 tig; trigger factor (peptidyl-prolyl cis/trans isomerase, chaperone) K03545 tig; trigger factor D ACRYA_1695 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D ACRYA_0493 hypC; hydrogenase assembly chaperone HypC K04653 hypC; hydrogenase expression/formation protein HypC D ACRYA_0494 hypD; hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D ACRYA_0498 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D ACRYA_1845 DsbA family protein, FrnE-like subfamily K07396 K07396; putative protein-disulfide isomerase C 99976 Replication and repair D ACRYA_0996 rmuC; DNA recombination protein K09760 rmuC; DNA recombination protein RmuC D ACRYA_0194 ATP-dependent endonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D ACRYA_1766 UPF0102 domain-containing protein K07460 yraN; putative endonuclease D ACRYA_1990 rarA; recombination factor protein RarA K07478 ycaJ; putative ATPase D ACRYA_a0019 IS3 family transposase orfA K07483 K07483; transposase D ACRYA_0491 hypothetical protein K07488 K07488; transposase D ACRYA_0189 integrase (rve domain) K07497 K07497; putative transposase D ACRYA_1410 integrase (rve domain) K07497 K07497; putative transposase D ACRYA_a0020 IS3 family transposase orfB K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D ACRYA_1323 YbaB/EbfC DNA-binding family protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D ACRYA_0479 major facilitator superfamily transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D ACRYA_1984 inorganic phosphate transporter, PitA family K03306 TC.PIT; inorganic phosphate transporter, PiT family D ACRYA_0829 branched-chain amino acid transport protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family C 99978 Cell growth D ACRYA_1290 Jag domain-containing protein K06346 jag; spoIIIJ-associated protein C 99993 Cell motility C 99995 Signaling proteins D ACRYA_1267 cstA; carbon starvation protein A K06200 cstA; carbon starvation protein D ACRYA_2023 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein D ACRYA_1988 putative ribonuclease, YlaK/PhoH family K07175 phoH2; PhoH-like ATPase D ACRYA_1481 cAMP-binding nucleotidyltransferase (CBS domain) K07182 K07182; CBS domain-containing protein D ACRYA_1487 cAMP-binding nucleotidyltransferase (CBS domain) K07182 K07182; CBS domain-containing protein D ACRYA_1107 putative YajQ-like nucleotide-binding protein (DUF520 domain) K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D ACRYA_0950 lolA; periplasmic outer membrane-specific lipoprotein chaperone K03634 lolA; outer membrane lipoprotein carrier protein D ACRYA_0857 mlaA; lipid asymmetry ABC transporter MlaABCDEF, lipoprotein MlaA K04754 mlaA; phospholipid-binding lipoprotein MlaA D ACRYA_1313 RND family efflux system, membrane fusion protein K02005 ABC.CD.TX; HlyD family secretion protein D ACRYA_0383 putative autoinducer 2 (AI-2E family) transporter K11744 tqsA; AI-2 transport protein TqsA C 99994 Others D ACRYA_1864 phoU; phosphate transport system regulatory protein K02039 phoU; phosphate transport system protein D ACRYA_1051 BFD-like [2Fe-2S]-binding domain-containing protein K02192 bfd; bacterioferritin-associated ferredoxin D ACRYA_1812 putative CutA divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein D ACRYA_2013 hemerythrin K07216 hr; hemerythrin D ACRYA_1353 imelysin-like iron-regulated protein A-like protein, IrpA family K07231 K07231; putative iron-regulated protein D ACRYA_0581 putative heme-copper protein NnrS K07234 K07234; uncharacterized protein involved in response to NO D ACRYA_1349 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO D ACRYA_0690 NosL domain-containing protein K19342 nosL; copper chaperone NosL D ACRYA_0932 hypothetical protein K19342 nosL; copper chaperone NosL B B 09194 Poorly characterized C 99996 General function prediction only D ACRYA_1277 CvpA family membrane protein K03558 cvpA; membrane protein required for colicin V production D ACRYA_1593 globin K06886 glbN; hemoglobin D ACRYA_a0043 Patatin-like phospholipase K07001 K07001; NTE family protein D ACRYA_0604 sufB; [Fe-S] cluster assembly scaffold SufBCD, SufB protein K09014 sufB; Fe-S cluster assembly protein SufB D ACRYA_0602 sufD; [Fe-S] cluster assembly scaffold SufBCD, SufD protein K09015 sufD; Fe-S cluster assembly protein SufD D ACRYA_0514 BrkB/YihY/UPF0761 family membrane protein, possible virulence factor K07058 K07058; membrane protein D ACRYA_0972 putative phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase D ACRYA_0600 sufE; sulfur acceptor/SufS accessory protein K02426 sufE; cysteine desulfuration protein SufE D ACRYA_1280 SPOR domain-containing protein K03749 dedD; DedD protein D ACRYA_1594 PqiA family membrane protein K03808 pqiA; paraquat-inducible protein A D ACRYA_1595 pqiA; paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D ACRYA_a0026 hypothetical protein K08982 K08982; putative membrane protein D ACRYA_0352 DUF350 domain-containing membrane protein K08989 K08989; putative membrane protein D ACRYA_1603 YchJ family protein (SEC-C domain) K09858 K09858; SEC-C motif domain protein D ACRYA_0025 Cupin domain-containing protein K11312 K11312; cupin 2 domain-containing protein D ACRYA_1858 PhnA domain-containing protein K06193 phnA; protein PhnA C 99997 Function unknown D ACRYA_1598 ankyrin domain-containing protein K06867 K06867; uncharacterized protein D ACRYA_1790 ankyrin domain-containing protein K06867 K06867; uncharacterized protein D ACRYA_1232 fibronectin type III domain-containing protein K06882 K06882; uncharacterized protein D ACRYA_1127 DUF234 domain-containing protein K06921 K06921; uncharacterized protein D ACRYA_0270 CoA-binding domain-containing protein K06929 K06929; uncharacterized protein D ACRYA_1070 putative [Fe-S] cluster-containing protein K06940 K06940; uncharacterized protein D ACRYA_0797 hypothetical protein K06950 K06950; uncharacterized protein D ACRYA_0480 NAD/FAD-binding protein K06954 K06954; uncharacterized protein D ACRYA_0315 putative RNA-binding protein (KH domain) K06960 K06960; uncharacterized protein D ACRYA_0660 putative membrane protein K07003 K07003; uncharacterized protein D ACRYA_0855 RND superfamily transporter K07003 K07003; uncharacterized protein D ACRYA_1018 nitroimidazol reductase (NimA) family protein K07005 K07005; uncharacterized protein D ACRYA_0995 putative neutral zinc metallopeptidase K07054 K07054; uncharacterized protein D ACRYA_0895 NAD-dependent epimerase/dehydratase (DUF1731 domain) K07071 K07071; uncharacterized protein D ACRYA_1794 arsP; arsenic resistance permease K07089 K07089; uncharacterized protein D ACRYA_0692 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D ACRYA_1400 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D ACRYA_1753 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D ACRYA_0119 YfcE family phosphodiesterase K07095 K07095; uncharacterized protein D ACRYA_0269 oligoribonuclease NrnB K07097 K07097; uncharacterized protein D ACRYA_0573 metallophosphoesterase (YkuE domain) K07098 K07098; uncharacterized protein D ACRYA_2011 membrane-associated metallophosphoesterase (YkuE domain) K07098 K07098; uncharacterized protein D ACRYA_0738 putative sulfur transporter K07112 K07112; uncharacterized protein D ACRYA_2024 fdhT; formate dehydrogenase biogenesis protein FdhT K07112 K07112; uncharacterized protein D ACRYA_1874 putative ammonia monooxygenase K07120 K07120; uncharacterized protein D ACRYA_0111 tetratricopeptide repeat protein K07126 K07126; uncharacterized protein D ACRYA_0112 hypothetical protein K07126 K07126; uncharacterized protein D ACRYA_0580 Sel1 domain-containing protein K07126 K07126; uncharacterized protein D ACRYA_1284 ATP-binding protein (AAA domain) K07133 K07133; uncharacterized protein D ACRYA_a0051 ATP-binding protein (AAA domain) K07133 K07133; uncharacterized protein D ACRYA_1700 radical SAM protein, TIGR01212 family K07139 K07139; uncharacterized protein D ACRYA_0310 zinc ribbon domain-containing protein (DUF164 domain) K07164 K07164; uncharacterized protein D ACRYA_1292 membrane protein insertion efficiency factor, YidD family K08998 K08998; uncharacterized protein D ACRYA_1221 intracellular sulfur oxidation protein, DsrE/DsrF family K09004 K09004; uncharacterized protein D ACRYA_1063 GatB/YqeY family protein K09117 K09117; uncharacterized protein D ACRYA_1434 AmmeMemoRadiSam system protein A K09141 K09141; uncharacterized protein D ACRYA_0273 PAS sensor-containing signal transduction protein K09155 K09155; uncharacterized protein D ACRYA_1937 DUF493 domain-containing protein K09158 K09158; uncharacterized protein D ACRYA_0481 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein D ACRYA_0788 DUF188 domain-containing protein K09768 K09768; uncharacterized protein D ACRYA_0445 YciI domain-containing protein K09780 K09780; uncharacterized protein D ACRYA_1183 putative MutK protein (DUF808 domain) K09781 K09781; uncharacterized protein D ACRYA_0933 sulfite exporter TauE/SafE family protein (DsbD_2 domain) K09792 K09792; uncharacterized protein D ACRYA_0554 DUF465 domain-containing protein K09794 K09794; uncharacterized protein D ACRYA_1707 SIMPL domain-containing protein K09797 K09797; uncharacterized protein D ACRYA_0198 divergent polysaccharide deacetylase K09798 K09798; uncharacterized protein D ACRYA_1046 DUF475 domain-containing membrane protein K09799 K09799; uncharacterized protein D ACRYA_1913 DUF507 domain-containing protein K09804 K09804; uncharacterized protein D ACRYA_0578 putative RNA-binding protein (S1 domain) K00243 K00243; uncharacterized protein D ACRYA_0049 peroxide stress protein YaaA K09861 K09861; uncharacterized protein D ACRYA_0184 hypothetical protein K09944 K09944; uncharacterized protein D ACRYA_0490 putative transcriptional regulator (zinc finger domain) K09981 K09981; uncharacterized protein D ACRYA_0217 putative RNA-binding protein (DUF448 domain) K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024