+E Messenger RNA Biogenesis KO
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Messenger RNA Biogenesis - Anaeromyxobacter dehalogenans 2CP-C
%
!
AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
D Cap binding complex
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
D Pre-mRNA cleavage factor IIm (CFIIm)
D Cleavage and polyadenylation specificity factor (CPSF) complex
D Cleavage stimulation factor (CSTF) complex
D U7-dependent histone pre-mRNA processing factors
D DRB sensitivity inducing factor (DSIF) complex
D N6-methyltransferase complex
D Poly(A) addition factors
D Negative regulators of mRNA 3' end processing
C Other processing factors
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
D TREX complex
D TREX-2 complex
D Nuclear pore complex
D Ran-mediated transport factors
D eIF4F and regulatory proteins
D APOBEC1-ACF complex
D Other transport factors
C Surveillance factors
D Surveillance complex
D Protein phosphatase 2A
D Other surveillance factors
C Factors involved in mRNA localization
D Cargo complex
D Factors that have mRNA localization signals
D Trans-acting binding proteins
D Other mRNA localization factors
C mRNA cycle factors
D Common to processing body (P body) and stress granule
D P-body specific factors
D Stress granule specific factors
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
D Lsm complex
D 5' exonucleases
D Other 5'-3' decay factors
C 3'-5' decay
D Core exosome factors
D Exosome cofactors
D TRAMP complex
D Ski complex
D Ccr4-NOT complex
D Pan complex
D Other 3'-5' decay factors
C Other degradation factors
D RNases
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AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E Adeh_0696 RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-]
E Adeh_1650 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
E Adeh_0095 Beta-lactamase-like protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
E Adeh_2432 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
E Adeh_1317 metal dependent phosphohydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D Helicases
E Adeh_2955 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
E Adeh_3044 DEAD/DEAH box helicase-like protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
E Adeh_1225 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
E Adeh_0838 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Other RNA degradosome components
E Adeh_1642 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E Adeh_1107 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E Adeh_0690 transcription termination factor Rho K03628 rho; transcription termination factor Rho
E Adeh_1137 H+-transporting two-sector ATPase, alpha/beta subunit K03628 rho; transcription termination factor Rho
C Other RNA degradation factors
D Chaperones
E Adeh_1580 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK
E Adeh_4328 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK
E Adeh_1549 Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
E Adeh_1536 conserved region 2266 K04043 dnaK; molecular chaperone DnaK
E Adeh_1807 Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
E Adeh_2588 Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
E Adeh_2689 Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
E Adeh_2350 conserved region 2266 K04043 dnaK; molecular chaperone DnaK
E Adeh_3594 chaperonin Cpn60, GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E Adeh_2394 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
E Adeh_0279 hypothetical protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
E Adeh_0147 uncharacterized P-loop ATPase protein UPF0042 K06958 rapZ; RNase adapter protein RapZ
E Adeh_0787 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
D Cofactors
D Others
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024