+E Transcription factors KO #

  Transcription Factors - Aeromonas salmonicida O23A

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AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D O23A_p0774 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D O23A_p1662 Arabinose operon regulatory protein K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein D O23A_p3327 Transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE D O23A_p0554 Transcriptional regulator K13652 K13652; AraC family transcriptional regulator D O23A_p3352 Transcriptional regulator K13652 K13652; AraC family transcriptional regulator D O23A_p1625 Transcriptional regulator K13653 K13653; AraC family transcriptional regulator D O23A_p1937 Transcriptional regulator K13653 K13653; AraC family transcriptional regulator D O23A_p0428 AraC-type DNA-binding protein K07506 K07506; AraC family transcriptional regulator D O23A_p1539 Transcriptional regulator K07506 K07506; AraC family transcriptional regulator D O23A_p2557 Methylphosphotriester-DNA--protein-cysteine S-methyltransferase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] C LysR family D O23A_p3090 Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D O23A_p1669 Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D O23A_p2474 Glycine cleavage system transcriptional activator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D O23A_p3549 HTH-type transcriptional regulator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D O23A_p4510 Transcriptional regulator K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator D O23A_p1622 Transcriptional activator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D O23A_p2924 Transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D O23A_p3557 Transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D O23A_p2058 Transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D O23A_p0290 Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D O23A_p4221 Chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D O23A_p1051 Transcriptional regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator D O23A_p1052 Regulatory protein CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D O23A_p3047 Alkanesulfonate utilization operon LysR-family regulator CbI K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator D O23A_p1044 Transcriptional regulator K18927 lldR; LysR family transcriptional regulator, L-lactate utilization regulator D O23A_p1628 Transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon D O23A_p1250 Transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D O23A_p1909 Transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator C DeoR family D O23A_p1914 Glycerol-3-phosphate regulon repressor GlpR K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D O23A_p4376 Glucitol operon repressor K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor C LacI family D O23A_p2009 Galactose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D O23A_p3915 Galactose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D O23A_p1331 Fructose repressor FruR K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D O23A_p2261 Sucrose operon repressor ScrR K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D O23A_p3164 Trehalose operon transcriptional repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor D O23A_p1361 Ribose operon repressor K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor D O23A_p3721 Purine nucleotide synthesis repressor K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor D O23A_p3413 Gluconate utilization system Gnt-I transcriptional repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D O23A_p3502 Evolved beta-D-galactosidase transcriptional repressor K12113 ebgR; LacI family transcriptional regulator, ebg operon repressor D O23A_p2220 Maltose regulon regulatory protein MalI K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein C GntR family D O23A_p3724 Putative transcriptional regulator of N-Acetylglucosamine utilization K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator D O23A_p4039 Histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D O23A_p1586 Transcriptional regulator for fatty acid degradation FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D O23A_p3214 Transcriptional repressor for pyruvate dehydrogenase complex K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D O23A_p4266 Transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase C TetR/AcrR family D O23A_p0649 Transcription repressor of multidrug efflux pump acrAB operon K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D O23A_p3606 Transcriptional regulator K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor D O23A_p3544 Transcriptional regulator SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D O23A_p2827 Quorum-sensing regulator of virulence HapR K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein D O23A_p2862 Transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D O23A_p4028 Unsaturated fatty acid biosynthesis repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator C Lrp/AsnC family D O23A_p3955 Regulatory protein AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D O23A_p1711 Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D O23A_p4386 Transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D O23A_p2870 Transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family C MarR family D O23A_p0386 Transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D O23A_p4383 Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D O23A_p3781 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D O23A_p4498 Transcriptional regulator ZntR K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D O23A_p4411 Transcriptional regulator MerR K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D O23A_p0886 Redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D O23A_p2525 Transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator C Fur family D O23A_p2040 Ferric uptake regulation protein FUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator C IclR family D O23A_p0542 Transcriptional regulator KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor C CRP/FNR family D O23A_p2685 Cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D O23A_p1372 Fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein C Rrf2 family D O23A_p1812 Iron-sulfur cluster regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D O23A_p3460 Nitrite-sensitive transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D O23A_p2979 Nitrite-sensitive transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor C ArsR family D O23A_p2952 Arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D O23A_p0551 Arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D O23A_p3076 Arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D O23A_p3070 Arsenical resistance operon repressor K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor D O23A_p2923 Transcriptional regulator ArsR K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator C XRE family D O23A_p3294 Transcriptional regulator yidN K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization C PadR family C Other families D O23A_p0525 Phosphogluconate repressor HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D O23A_p3980 Biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D O23A_p4526 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D O23A_p4171 sugar-phosphate stress protein SgrR K11925 sgrR; SgrR family transcriptional regulator D O23A_p2285 Putrescine utilization regulator K14056 puuR; HTH-type transcriptional regulator, repressor for puuD D O23A_p0719 Flagellar regulatory protein FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D O23A_p0400 sigma-54-dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D O23A_p1731 sigma-54-dependent transcriptional regulator K11908 vasH; sigma-54 dependent transcriptional regulator D O23A_p3725 Anaerobic nitric oxide reductase transcription regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator D O23A_p1111 Formate hydrogenlyase transcriptional activator K15836 fhlA; formate hydrogenlyase transcriptional activator D O23A_p3003 Sugar diacid utilization regulator SdaR K02647 cdaR; carbohydrate diacid regulator D O23A_p0437 C protein K07726 K07726; putative transcriptional regulator D O23A_p0813 C protein K07726 K07726; putative transcriptional regulator D O23A_p2692 Transcriptional regulator K07727 K07727; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families D O23A_p4257 Methionine repressor MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D O23A_p2833 Proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family C Others D O23A_p2486 Cell division protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D O23A_p3663 partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D O23A_p2752 Transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH D O23A_p3931 Arginine pathway regulatory protein ArgR K03402 argR; transcriptional regulator of arginine metabolism D O23A_p2989 Arginine pathway regulatory protein ArgR K03402 argR; transcriptional regulator of arginine metabolism D O23A_p2047 N-acetylglucosamine-6P-responsive transcriptional repressor NagC K02565 nagC; N-acetylglucosamine repressor D O23A_p1599 Mlc transcriptional repressor K15545 mlc; transcriptional regulator of PTS gene D O23A_p4214 Mannitol operon repressor K02562 mtlR; mannitol operon repressor D O23A_p1689 Transcriptional repressor protein TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D O23A_p2426 Transcriptional activator of cad operon K03765 cadC; transcriptional activator of cad operon D O23A_p2770 Glycine cleavage system transcriptional antiactivator GcvR K03567 gcvR; glycine cleavage system transcriptional repressor D O23A_p1697 Psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator D O23A_p3097 Phage shock protein C K03973 pspC; phage shock protein C D O23A_p1694 Phage shock protein C K03973 pspC; phage shock protein C D O23A_p3361 Glycerol metabolism operon regulatory protein K05880 dhaR; transcriptional activator for dhaKLM operon D O23A_p0750 Regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase D O23A_p0483 Putative transcriptional regulator K07733 alpA; prophage regulatory protein D O23A_p3058 Transcriptional regulator K07734 paiB; transcriptional regulator D O23A_p0351 protein YqgE K07735 algH; putative transcriptional regulator D O23A_p1472 DksA-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor D O23A_p3873 RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D O23A_p2817 RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D O23A_p0153 Ribonucleotide reductase transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D O23A_p0059 Curlin genes transcriptional activator K11926 crl; sigma factor-binding protein Crl D O23A_p0818 transcriptional regulator K22302 dicC; transcriptional repressor of cell division inhibition gene dicB D O23A_p3244 Cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0