+D GENES KO #

  KEGG Orthology (KO) - Acidithiobacillus ferrooxidans ATCC 53993

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:afe00010] D Lferr_2462 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Lferr_2539 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Lferr_1482 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D Lferr_0368 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Lferr_2854 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Lferr_2849 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Lferr_1374 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Lferr_1479 Fructose-bisphosphate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11] D Lferr_2259 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Lferr_2852 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Lferr_2851 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Lferr_0684 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Lferr_1492 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Lferr_0975 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Lferr_0897 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Lferr_2850 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Lferr_1478 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Lferr_1493 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Lferr_1490 Pyruvate dehydrogenase (acetyl-transferring) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D Lferr_2676 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D Lferr_1489 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D Lferr_2675 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D Lferr_1488 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Lferr_1074 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_1567 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_2674 catalytic domain of components of various dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_0845 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Lferr_1744 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Lferr_0165 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Lferr_0972 Alcohol dehydrogenase GroES domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Lferr_1649 Pyrrolo-quinoline quinone K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D Lferr_1790 Aldehyde dehydrogenase (NAD(+)) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D Lferr_1637 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Lferr_1963 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:afe00020] D Lferr_2672 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1] D Lferr_0585 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Lferr_0586 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Lferr_1074 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_1567 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_2674 catalytic domain of components of various dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_0589 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Lferr_0587 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Lferr_2298 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Lferr_2610 Lactate/malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Lferr_1490 Pyruvate dehydrogenase (acetyl-transferring) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D Lferr_2676 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D Lferr_1489 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D Lferr_2675 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D Lferr_1488 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:afe00030] D Lferr_2539 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Lferr_1690 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Lferr_2455 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D Lferr_1689 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Lferr_2848 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Lferr_1522 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Lferr_2853 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Lferr_0581 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Lferr_0779 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Lferr_1712 Phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D Lferr_1963 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Lferr_1933 conserved hypothetical protein K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23] D Lferr_2385 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Lferr_1879 short-chain dehydrogenase/reductase SDR K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D Lferr_1535 short-chain dehydrogenase/reductase SDR K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D Lferr_2849 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Lferr_1374 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Lferr_1479 Fructose-bisphosphate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11] D Lferr_0368 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Lferr_2854 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Lferr_1482 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:afe00040] D Lferr_0769 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Lferr_0606 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Lferr_2848 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:afe00051] D Lferr_1266 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Lferr_2891 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D Lferr_2573 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D Lferr_1061 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8] D Lferr_2890 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D Lferr_2592 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D Lferr_1482 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D Lferr_0368 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Lferr_2854 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Lferr_2849 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Lferr_1374 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Lferr_1479 Fructose-bisphosphate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11] D Lferr_2259 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Lferr_2889 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281] D Lferr_2628 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:afe00052] D Lferr_1961 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Lferr_0606 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Lferr_1963 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Lferr_2462 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Lferr_1482 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism [PATH:afe00053] D Lferr_0769 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Lferr_0760 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Lferr_1634 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] C 00500 Starch and sucrose metabolism [PATH:afe00500] D Lferr_1267 sucrose-phosphate synthase K00696 E2.4.1.14; sucrose-phosphate synthase [EC:2.4.1.14] D Lferr_1268 Sucrose synthase K00695 SUS; sucrose synthase [EC:2.4.1.13] D Lferr_0606 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Lferr_2459 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Lferr_2303 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Lferr_2458 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Lferr_1476 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Lferr_0685 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Lferr_2108 Glucan 1,4-alpha-glucosidase K01178 SGA1; glucoamylase [EC:3.2.1.3] D Lferr_1878 Glucan 1,4-alpha-glucosidase K01178 SGA1; glucoamylase [EC:3.2.1.3] D Lferr_2461 4-alpha-glucanotransferase K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25] D Lferr_1738 malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D Lferr_1739 malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D Lferr_1740 glycosyl transferase group 1 K13057 treT; trehalose synthase [EC:2.4.1.245] D Lferr_1963 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Lferr_2462 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Lferr_2539 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Lferr_1266 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:afe00520] D Lferr_2447 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Lferr_1266 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Lferr_2804 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Lferr_2260 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Lferr_2805 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Lferr_0360 protein of unknown function UPF0075 K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D Lferr_1500 phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D Lferr_2642 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D Lferr_2641 Nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D Lferr_2648 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Lferr_0383 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Lferr_2462 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Lferr_1963 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Lferr_0606 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Lferr_0769 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Lferr_1961 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Lferr_0760 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Lferr_1634 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Lferr_2628 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Lferr_2539 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Lferr_1061 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8] D Lferr_2891 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D Lferr_2573 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D Lferr_2890 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D Lferr_2592 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D Lferr_2889 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281] D Lferr_1256 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D Lferr_0428 oxidoreductase FAD/NAD(P)-binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D Lferr_0984 oxidoreductase FAD/NAD(P)-binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D Lferr_2459 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:afe00620] D Lferr_1637 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Lferr_1490 Pyruvate dehydrogenase (acetyl-transferring) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D Lferr_2676 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D Lferr_1489 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D Lferr_2675 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D Lferr_1488 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Lferr_1074 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_1567 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_2674 catalytic domain of components of various dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_1744 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Lferr_0165 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Lferr_0845 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Lferr_0972 Alcohol dehydrogenase GroES domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Lferr_1649 Pyrrolo-quinoline quinone K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D Lferr_0897 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Lferr_2850 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Lferr_1478 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Lferr_1178 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Lferr_0375 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Lferr_0374 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Lferr_1725 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Lferr_1790 Aldehyde dehydrogenase (NAD(+)) K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D Lferr_2757 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D Lferr_0566 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Lferr_0561 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Lferr_0809 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D Lferr_2610 Lactate/malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Lferr_2298 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Lferr_1558 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Lferr_1493 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Lferr_2225 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Lferr_1658 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Lferr_1224 homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:afe00630] D Lferr_1637 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Lferr_2610 Lactate/malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Lferr_2672 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1] D Lferr_0585 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Lferr_1362 D-lactate dehydrogenase (cytochrome) K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D Lferr_1361 FAD linked oxidase domain protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D Lferr_1360 protein of unknown function DUF224 cysteine-rich region domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D Lferr_1872 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Lferr_2847 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Lferr_1814 Ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Lferr_1389 Ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Lferr_2660 Ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Lferr_1388 Ribulose-bisphosphate carboxylase K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D Lferr_2661 Ribulose-bisphosphate carboxylase K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D Lferr_0626 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Lferr_0471 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Lferr_1095 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Lferr_1096 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Lferr_1093 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Lferr_1074 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_1567 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_2674 catalytic domain of components of various dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_1094 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Lferr_2490 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein D Lferr_2177 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein D Lferr_2175 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein C 00640 Propanoate metabolism [PATH:afe00640] D Lferr_1637 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Lferr_1074 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_1567 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_2674 catalytic domain of components of various dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_1178 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Lferr_0375 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Lferr_0374 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Lferr_1725 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Lferr_0587 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Lferr_0589 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:afe00650] D Lferr_1483 Phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19] D Lferr_1262 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Lferr_0892 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Lferr_0893 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:afe00660] D Lferr_0892 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Lferr_0893 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Lferr_0587 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Lferr_0589 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Lferr_0775 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Lferr_0776 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Lferr_1732 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:afe00562] D Lferr_2855 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Lferr_0818 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Lferr_2259 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:afe00190] D Lferr_2257 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D Lferr_2042 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D Lferr_2256 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D Lferr_2255 NADH (or F420H2) dehydrogenase, subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D Lferr_2254 NADH dehydrogenase I, D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D Lferr_2253 NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Lferr_2252 NADH-quinone oxidoreductase, F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Lferr_2251 NADH-quinone oxidoreductase, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D Lferr_2250 NADH dehydrogenase (quinone) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D Lferr_2249 NADH-quinone oxidoreductase, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D Lferr_2248 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D Lferr_2247 NADH-ubiquinone oxidoreductase chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D Lferr_2246 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D Lferr_2245 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D Lferr_2244 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D Lferr_1532 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D Lferr_2707 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Lferr_2351 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Lferr_2352 Cytochrome b/b6 domain K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Lferr_2708 Cytochrome b/b6 domain K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Lferr_2353 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D Lferr_2709 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D Lferr_0785 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Lferr_2741 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Lferr_0784 conserved hypothetical protein K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D Lferr_2746 hypothetical protein K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D Lferr_2747 Cytochrome-c oxidase K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D Lferr_2748 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D Lferr_0783 heme/copper-type cytochrome/quinol oxidase subunit 3-like protein K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D Lferr_0782 Cytochrome-c oxidase K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D Lferr_0781 COX aromatic rich domain protein K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D Lferr_1070 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Lferr_1069 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Lferr_1630 cytochrome c class I K08738 CYC; cytochrome c D Lferr_2076 cytochrome c class I K08738 CYC; cytochrome c D Lferr_2809 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Lferr_2807 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Lferr_2808 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Lferr_2810 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Lferr_2806 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Lferr_2053 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Lferr_0904 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Lferr_2813 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Lferr_2811 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Lferr_2812 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Lferr_2687 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1] D Lferr_0959 plasma-membrane proton-efflux P-type ATPase K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1] D Lferr_0652 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D Lferr_1551 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Lferr_1566 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms [PATH:afe00710] D Lferr_1814 Ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Lferr_1389 Ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Lferr_2660 Ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Lferr_1388 Ribulose-bisphosphate carboxylase K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D Lferr_2661 Ribulose-bisphosphate carboxylase K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D Lferr_2851 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Lferr_2852 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Lferr_2849 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Lferr_1374 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Lferr_0368 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Lferr_2854 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Lferr_1522 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Lferr_2853 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Lferr_0779 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Lferr_0693 Phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D Lferr_2259 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Lferr_2848 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Lferr_1558 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Lferr_0809 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D Lferr_2610 Lactate/malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:afe00680] D Lferr_0844 S-(hydroxymethyl)glutathione synthase K03396 gfa; S-(hydroxymethyl)glutathione synthase [EC:4.4.1.22] D Lferr_0845 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Lferr_0846 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D Lferr_0471 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Lferr_0975 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Lferr_1558 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Lferr_2610 Lactate/malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Lferr_2849 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Lferr_1374 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Lferr_1479 Fructose-bisphosphate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11] D Lferr_0368 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Lferr_2854 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Lferr_1482 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D Lferr_2183 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Lferr_2184 protein of unknown function DUF224 cysteine-rich region domain protein K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Lferr_2178 CoB--CoM heterodisulfide reductase K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Lferr_2215 protein of unknown function DUF224 cysteine-rich region domain protein K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Lferr_2185 conserved hypothetical protein K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Lferr_1637 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Lferr_1493 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Lferr_0684 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Lferr_1492 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Lferr_1018 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Lferr_1017 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Lferr_0538 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:afe00910] D Lferr_1239 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Lferr_1238 nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Lferr_1240 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Lferr_1355 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Lferr_2347 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D Lferr_0626 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Lferr_0878 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Lferr_0877 glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Lferr_0464 Carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D Lferr_1431 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:afe00920] D Lferr_2586 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Lferr_2724 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Lferr_2723 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Lferr_2585 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Lferr_0696 Sulfate adenylyltransferase., Adenylyl-sulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Lferr_2587 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Lferr_2722 adenylylsulfate reductase, thioredoxin dependent K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D Lferr_2720 flavodoxin/nitric oxide synthase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D Lferr_2721 Sulfite reductase (NADPH) K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D Lferr_2716 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D Lferr_0195 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D Lferr_1469 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D Lferr_0444 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D Lferr_2229 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D Lferr_1071 beta-lactamase domain protein K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18] D Lferr_0045 TQO small subunit DoxD K05908 doxDA; thiosulfate dehydrogenase (quinone) [EC:1.8.5.2] D Lferr_0049 TQO small subunit DoxD K05908 doxDA; thiosulfate dehydrogenase (quinone) [EC:1.8.5.2] D Lferr_0820 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Lferr_1223 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Lferr_0469 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Lferr_1721 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:afe00061] D Lferr_1178 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Lferr_0375 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Lferr_0374 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Lferr_1725 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Lferr_1584 acyl carrier protein K02078 acpP; acyl carrier protein D Lferr_0940 acyl carrier protein K02078 acpP; acyl carrier protein D Lferr_1582 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Lferr_1581 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Lferr_0939 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Lferr_1585 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Lferr_0936 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Lferr_1583 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Lferr_1171 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Lferr_0582 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Lferr_0397 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:afe00071] D Lferr_0397 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Lferr_0983 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D Lferr_0845 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Lferr_1744 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Lferr_0165 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:afe00561] D Lferr_0972 Alcohol dehydrogenase GroES domain protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Lferr_1580 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Lferr_0125 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Lferr_0059 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Lferr_2212 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Lferr_1143 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00564 Glycerophospholipid metabolism [PATH:afe00564] D Lferr_1785 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Lferr_0125 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Lferr_0059 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Lferr_2212 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Lferr_0746 methyltransferase type 11 K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71] D Lferr_1165 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Lferr_0896 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Lferr_0895 phosphatidylserine decarboxylase related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D Lferr_0980 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Lferr_1048 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D Lferr_1434 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D Lferr_0455 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D Lferr_1575 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] D Lferr_2172 geranylgeranyl reductase K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism D Lferr_1780 hopanoid biosynthesis associated glycosyl transferase protein HpnI K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:afe00230] D Lferr_1963 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Lferr_2385 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Lferr_1722 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Lferr_1908 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Lferr_1570 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Lferr_1572 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Lferr_1688 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D Lferr_1988 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D Lferr_1573 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Lferr_0450 phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D Lferr_0449 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Lferr_1989 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Lferr_1990 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Lferr_1907 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Lferr_0697 phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Lferr_0628 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Lferr_0567 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Lferr_0594 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Lferr_0534 phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Lferr_1453 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Lferr_1601 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Lferr_1976 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Lferr_0952 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D Lferr_0951 molybdopterin dehydrogenase FAD-binding K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D Lferr_0953 (2Fe-2S)-binding domain protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D Lferr_1454 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Lferr_2158 GMP synthase - Glutamine amidotransferase domain-like protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Lferr_0915 Guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D Lferr_0717 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Lferr_2264 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Lferr_2265 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Lferr_2340 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Lferr_0879 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D Lferr_0719 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Lferr_1158 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Lferr_1564 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Lferr_0688 PfkB domain protein K00856 ADK; adenosine kinase [EC:2.7.1.20] D Lferr_0916 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D Lferr_1798 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Lferr_0518 Nucleoside-triphosphate--adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Lferr_1850 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D Lferr_2586 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Lferr_2724 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Lferr_2723 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Lferr_2585 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Lferr_0696 Sulfate adenylyltransferase., Adenylyl-sulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Lferr_0921 conserved hypothetical protein K01483 allA; ureidoglycolate lyase [EC:4.3.2.3] D Lferr_0928 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] C 00240 Pyrimidine metabolism [PATH:afe00240] D Lferr_0789 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Lferr_0790 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Lferr_2666 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Lferr_1180 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3] D Lferr_1369 dihydroorotase, homodimeric type K01465 URA4; dihydroorotase [EC:3.5.2.3] D Lferr_2665 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3] D Lferr_1911 Dihydroorotate oxidase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D Lferr_1029 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Lferr_1028 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Lferr_1162 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Lferr_1601 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Lferr_2566 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Lferr_0973 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Lferr_1024 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Lferr_0628 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Lferr_0567 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Lferr_2667 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Lferr_1798 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Lferr_2340 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Lferr_2286 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D Lferr_2264 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Lferr_2265 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Lferr_1588 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Lferr_0526 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Lferr_0880 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:afe00250] D Lferr_1687 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Lferr_1114 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Lferr_0568 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Lferr_2875 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Lferr_1564 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Lferr_1990 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Lferr_2666 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Lferr_1262 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Lferr_0878 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Lferr_0877 glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Lferr_0626 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Lferr_0789 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Lferr_0790 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Lferr_2804 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Lferr_1722 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:afe00260] D Lferr_0571 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Lferr_1731 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Lferr_0633 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Lferr_2695 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D Lferr_0634 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Lferr_0471 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Lferr_0684 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Lferr_1492 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Lferr_1018 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Lferr_1017 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Lferr_0538 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Lferr_1095 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Lferr_1096 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Lferr_1093 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Lferr_1074 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_1567 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_2674 catalytic domain of components of various dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_1094 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Lferr_2490 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein D Lferr_2177 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein D Lferr_2175 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein D Lferr_0896 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Lferr_0870 threonine dehydratase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Lferr_1726 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Lferr_1727 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:afe00270] D Lferr_0820 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Lferr_1223 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Lferr_0415 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Lferr_0465 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Lferr_0690 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Lferr_0336 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Lferr_1819 putative transferase K00797 speE; spermidine synthase [EC:2.5.1.16] D Lferr_0321 putative transferase K00797 speE; spermidine synthase [EC:2.5.1.16] D Lferr_0335 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Lferr_1666 autoinducer synthesis protein K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184] D Lferr_1782 hopanoid-associated phosphorylase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D Lferr_0594 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Lferr_1502 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Lferr_0535 methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44] D Lferr_1015 translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D Lferr_0598 methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] D Lferr_0596 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K08965 mtnW; 2,3-diketo-5-methylthiopentyl-1-phosphate enolase [EC:5.3.2.5] D Lferr_0597 Haloacid dehalogenase domain protein hydrolase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87] D Lferr_0595 Acireductone dioxygenase ARD K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D Lferr_0691 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Lferr_0571 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Lferr_1731 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Lferr_0633 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Lferr_0469 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Lferr_1721 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D Lferr_0703 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Lferr_2671 glutamate/cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Lferr_2670 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D Lferr_1687 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Lferr_2610 Lactate/malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Lferr_2454 cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D Lferr_1018 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Lferr_1017 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:afe00280] D Lferr_0703 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Lferr_1074 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_1567 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_2674 catalytic domain of components of various dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:afe00290] D Lferr_0870 threonine dehydratase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Lferr_0775 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Lferr_0776 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Lferr_1732 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Lferr_0892 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Lferr_0893 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Lferr_0894 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Lferr_0811 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Lferr_1370 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Lferr_0703 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Lferr_2225 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Lferr_1658 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:afe00300] D Lferr_0633 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Lferr_0571 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Lferr_1731 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Lferr_1992 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Lferr_2289 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Lferr_1497 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D Lferr_0570 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Lferr_1498 aminotransferase class I and II K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D Lferr_1496 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Lferr_2363 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Lferr_2877 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Lferr_0390 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Lferr_0389 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:afe00310] D Lferr_1074 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_1567 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_2674 catalytic domain of components of various dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_1262 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Lferr_0868 FAD dependent oxidoreductase K26064 amaD; D-lysine oxidase C 00220 Arginine biosynthesis [PATH:afe00220] D Lferr_0569 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Lferr_0568 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Lferr_2875 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Lferr_0626 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Lferr_1687 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Lferr_0813 amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D Lferr_0402 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D Lferr_0433 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Lferr_2679 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Lferr_0570 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:afe00330] D Lferr_1186 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Lferr_2154 N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D Lferr_1819 putative transferase K00797 speE; spermidine synthase [EC:2.5.1.16] D Lferr_0321 putative transferase K00797 speE; spermidine synthase [EC:2.5.1.16] D Lferr_0335 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Lferr_0336 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Lferr_0439 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Lferr_0459 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Lferr_1460 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Lferr_2088 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Lferr_1889 aspartate/glutamate/uridylate kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Lferr_0615 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Lferr_2737 2OG-Fe(II) oxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2] D Lferr_1687 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:afe00340] D Lferr_2649 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Lferr_1563 tRNA synthetase class II (G H P and S) K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D Lferr_2656 phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D Lferr_2654 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Lferr_2653 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Lferr_2655 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Lferr_2652 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D Lferr_1020 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Lferr_2651 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Lferr_2650 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:afe00350] D Lferr_1687 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Lferr_1020 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Lferr_2651 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Lferr_0845 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Lferr_1744 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Lferr_0165 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Lferr_1262 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Lferr_1188 fumarylacetoacetate (FAA) hydrolase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] C 00360 Phenylalanine metabolism [PATH:afe00360] D Lferr_1687 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Lferr_1020 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Lferr_2651 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Lferr_0983 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] C 00380 Tryptophan metabolism D Lferr_1074 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_1567 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_2674 catalytic domain of components of various dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:afe00400] D Lferr_1021 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Lferr_2297 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Lferr_0881 3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4] D Lferr_1479 Fructose-bisphosphate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11] D Lferr_0376 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D Lferr_0361 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D Lferr_0882 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Lferr_1023 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Lferr_1640 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Lferr_2846 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Lferr_2845 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Lferr_2844 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Lferr_1728 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Lferr_2843 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Lferr_1726 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Lferr_1727 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Lferr_1019 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D Lferr_1022 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Lferr_1687 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Lferr_1020 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Lferr_2651 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Lferr_0932 Endoribonuclease L-PSP K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:afe00410] D Lferr_2688 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Lferr_1446 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism [PATH:afe00440] D Lferr_1927 phosphonate metabolism K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37] D Lferr_1925 phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37] D Lferr_1926 phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37] D Lferr_1930 phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37] D Lferr_1931 phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63] D Lferr_1928 phosphonate metabolism PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1] D Lferr_1107 beta-lactamase domain protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:afe00450] D Lferr_0415 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Lferr_0465 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Lferr_0545 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Lferr_2586 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Lferr_2724 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Lferr_2723 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Lferr_2585 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Lferr_0696 Sulfate adenylyltransferase., Adenylyl-sulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Lferr_2296 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D Lferr_0471 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:afe00470] D Lferr_2441 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Lferr_0382 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Lferr_2463 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Lferr_0387 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Lferr_2363 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Lferr_2877 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:afe00480] D Lferr_2671 glutamate/cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Lferr_2670 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D Lferr_1857 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Lferr_1548 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Lferr_2223 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Lferr_1190 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Lferr_0356 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Lferr_0467 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Lferr_0536 glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D Lferr_0586 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Lferr_1689 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Lferr_1690 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Lferr_0537 glutaredoxin-family domain protein K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27] D Lferr_1819 putative transferase K00797 speE; spermidine synthase [EC:2.5.1.16] D Lferr_0321 putative transferase K00797 speE; spermidine synthase [EC:2.5.1.16] D Lferr_0335 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:afe00540] D Lferr_1172 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Lferr_0399 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Lferr_1170 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Lferr_1656 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Lferr_1175 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Lferr_0649 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Lferr_2638 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Lferr_0974 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Lferr_2637 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Lferr_0651 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Lferr_0413 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Lferr_2302 3-deoxy-D-manno-octulosonic-acid transferase-like protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Lferr_0414 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Lferr_0435 conserved hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D Lferr_1506 conserved hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D Lferr_0862 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D Lferr_1129 rfaE bifunctional protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D Lferr_2211 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D Lferr_1635 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D Lferr_0411 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D Lferr_0311 lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D Lferr_0408 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:afe00541] D Lferr_0606 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Lferr_1961 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Lferr_0769 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Lferr_0760 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Lferr_1634 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Lferr_2893 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Lferr_0602 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Lferr_2892 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Lferr_0603 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Lferr_0428 oxidoreductase FAD/NAD(P)-binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D Lferr_0984 oxidoreductase FAD/NAD(P)-binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D Lferr_2891 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D Lferr_2573 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D Lferr_1061 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01840 manB; phosphomannomutase [EC:5.4.2.8] D Lferr_2890 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D Lferr_2592 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D Lferr_2889 NAD-dependent epimerase/dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281] D Lferr_1256 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D Lferr_2805 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:afe00550] D Lferr_2648 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Lferr_0383 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Lferr_0384 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Lferr_0387 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Lferr_0390 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Lferr_0382 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Lferr_0389 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Lferr_0529 diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66] D Lferr_1164 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Lferr_0787 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Lferr_0388 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Lferr_0385 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Lferr_1877 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Lferr_1901 glycosyl transferase family 51 K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D Lferr_2195 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Lferr_1802 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Lferr_0391 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Lferr_2515 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Lferr_2197 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Lferr_1985 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Lferr_2538 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Lferr_1628 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Lferr_1830 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:afe00552] D Lferr_0787 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Lferr_1143 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:afe00543] D Lferr_0820 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Lferr_1223 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:afe00730] D Lferr_1064 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Lferr_2903 Phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D Lferr_0822 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Lferr_1225 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Lferr_0188 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Lferr_1253 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Lferr_1624 FAD dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19] D Lferr_1642 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Lferr_0793 thiazole biosynthesis family protein K03149 thiG; thiazole synthase [EC:2.8.1.10] D Lferr_2902 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Lferr_1047 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D Lferr_0518 Nucleoside-triphosphate--adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:afe00740] D Lferr_0475 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Lferr_0473 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Lferr_1663 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D Lferr_0476 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Lferr_0474 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Lferr_0712 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Lferr_0796 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:afe00750] D Lferr_0778 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D Lferr_1017 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Lferr_0344 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D Lferr_1124 pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D Lferr_0634 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:afe00760] D Lferr_1114 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Lferr_0058 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Lferr_1862 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Lferr_0628 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Lferr_2561 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Lferr_0590 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D Lferr_1049 CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D Lferr_0612 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D Lferr_1262 Aldehyde Dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:afe00770] D Lferr_0892 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Lferr_0893 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Lferr_0894 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Lferr_0811 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Lferr_1370 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Lferr_1447 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Lferr_1446 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Lferr_0613 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Lferr_0527 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Lferr_2375 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Lferr_0366 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Lferr_1125 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Lferr_0703 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Lferr_2688 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:afe00780] D Lferr_0421 biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D Lferr_0939 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Lferr_1585 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Lferr_0936 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Lferr_1583 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Lferr_1171 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Lferr_0582 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Lferr_0420 bioH protein K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D Lferr_2618 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Lferr_0419 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Lferr_1596 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Lferr_0422 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D Lferr_1373 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D Lferr_0436 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D Lferr_0614 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:afe00785] D Lferr_2199 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D Lferr_2200 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D Lferr_2174 Radical SAM domain protein K09711 lipS1; lipoyl synthase D Lferr_2171 Radical SAM domain protein K24689 lipS2; lipoyl synthase D Lferr_2343 biotin/lipoate A/B protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D Lferr_2173 biotin/lipoate A/B protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D Lferr_1074 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_1567 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_2674 catalytic domain of components of various dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_1490 Pyruvate dehydrogenase (acetyl-transferring) K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D Lferr_2676 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D Lferr_1489 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D Lferr_2675 Transketolase central region K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D Lferr_1488 catalytic domain of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Lferr_1095 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Lferr_1096 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Lferr_1093 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Lferr_1094 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Lferr_2490 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein D Lferr_2177 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein D Lferr_2175 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:afe00790] D Lferr_1641 protein of unknown function DUF198 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D Lferr_0126 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D Lferr_1449 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Lferr_2261 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Lferr_1724 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Lferr_0475 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Lferr_0730 para-aminobenzoate synthase, subunit I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D Lferr_1586 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D Lferr_1537 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Lferr_0300 short-chain dehydrogenase/reductase SDR K03793 PTR1; pteridine reductase [EC:1.5.1.33] D Lferr_0070 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Lferr_0069 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Lferr_0899 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Lferr_2189 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Lferr_2191 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Lferr_1090 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Lferr_2821 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Lferr_1735 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Lferr_1733 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:afe00670] D Lferr_1552 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Lferr_0471 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Lferr_1570 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Lferr_1572 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Lferr_1907 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Lferr_0021 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Lferr_1093 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Lferr_0880 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Lferr_0692 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Lferr_1799 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:afe00860] D Lferr_0584 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Lferr_2381 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Lferr_2901 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Lferr_2896 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Lferr_2898 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Lferr_0876 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Lferr_1910 Coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D Lferr_0305 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D Lferr_0152 amine oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D Lferr_0724 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D Lferr_0358 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D Lferr_2725 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Lferr_0785 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Lferr_2741 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Lferr_2726 cobalamin (vitamin B12) biosynthesis CbiX protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D Lferr_0929 pyridoxamine 5'-phosphate oxidase-related FMN-binding K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D Lferr_1380 Ferritin Dps family protein K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:afe00130] D Lferr_0745 Chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D Lferr_0932 Endoribonuclease L-PSP K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45] D Lferr_0744 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Lferr_2013 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D Lferr_0796 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Lferr_2019 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D Lferr_1501 ubiquinone biosynthesis O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D Lferr_2018 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D Lferr_0466 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Lferr_2840 ubiquinone biosynthesis protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D Lferr_0620 flavoprotein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D Lferr_2827 flavoprotein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:afe00900] D Lferr_1642 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Lferr_1166 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Lferr_0540 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Lferr_2384 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Lferr_0541 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Lferr_1605 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Lferr_2858 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D Lferr_0796 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Lferr_1643 Polyprenyl synthetase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D Lferr_2517 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Lferr_1164 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:afe00909] D Lferr_1783 squalene-hopene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129] C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:afe00906] D Lferr_1784 Squalene synthase K10208 crtM; 4,4'-diapophytoene synthase [EC:2.5.1.96] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Lferr_1522 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Lferr_2853 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:afe00523] D Lferr_2893 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Lferr_0602 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Lferr_2892 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Lferr_0603 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D Lferr_2759 Chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21] C 01055 Biosynthesis of vancomycin group antibiotics D Lferr_0602 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D Lferr_0950 peptidase S45 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis [PATH:afe00332] D Lferr_0459 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Lferr_1460 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Lferr_2088 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Lferr_1889 aspartate/glutamate/uridylate kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Lferr_0615 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:afe00261] D Lferr_2586 sulfate adenylyltransferase, large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Lferr_2724 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Lferr_2723 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Lferr_2585 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Lferr_0696 Sulfate adenylyltransferase., Adenylyl-sulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Lferr_0571 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Lferr_1731 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Lferr_1992 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Lferr_2289 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:afe00521] D Lferr_2462 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Lferr_1963 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Lferr_2855 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Lferr_0818 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Lferr_2893 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Lferr_0602 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Lferr_2892 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Lferr_0603 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Lferr_2462 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:afe00525] D Lferr_2893 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Lferr_0602 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:afe00401] D Lferr_1022 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Lferr_1687 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Lferr_1020 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Lferr_2651 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Lferr_2846 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Lferr_2845 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Lferr_1582 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Lferr_0936 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Lferr_1583 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Lferr_0582 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Lferr_1584 acyl carrier protein K02078 acpP; acyl carrier protein D Lferr_0940 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:afe00999] D Lferr_0690 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Lferr_0361 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation D Lferr_0796 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation [PATH:afe00364] D Lferr_1865 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:afe00625] D Lferr_1744 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Lferr_0165 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Lferr_0845 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D Lferr_1238 nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Lferr_1240 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Lferr_1239 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Lferr_1649 Pyrrolo-quinoline quinone K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:afe00361] D Lferr_1865 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:afe00623] D Lferr_1865 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation C 00633 Nitrotoluene degradation D Lferr_2884 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Lferr_2881 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Lferr_0850 Hydrogen:quinone oxidoreductase K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6] D Lferr_0849 NADH ubiquinone oxidoreductase 20 kDa subunit K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation [PATH:afe00791] D Lferr_0922 ring-opening amidohydrolase K03383 atzD; cyanuric acid amidohydrolase [EC:3.5.2.15] D Lferr_0925 amidohydrolase, AtzE family K19837 atzE; 1-carboxybiuret hydrolase [EC:3.5.1.131] C 00930 Caprolactam degradation D Lferr_1672 ThiJ/PfpI domain protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:afe00626] D Lferr_1744 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Lferr_0165 Alcohol dehydrogenase GroES domain protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Lferr_0845 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:afe03020] D Lferr_0490 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Lferr_0491 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Lferr_0524 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Lferr_0718 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:afe03010] D Lferr_1025 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D Lferr_1160 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Lferr_0503 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Lferr_0523 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Lferr_0514 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Lferr_2446 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Lferr_0493 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Lferr_0511 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Lferr_2680 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Lferr_0496 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Lferr_0522 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Lferr_0492 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Lferr_0521 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Lferr_0510 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Lferr_0558 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Lferr_2476 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Lferr_0506 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Lferr_2445 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Lferr_0501 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Lferr_1846 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Lferr_1974 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Lferr_0487 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Lferr_0500 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Lferr_0497 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Lferr_0498 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Lferr_0509 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Lferr_0512 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Lferr_0489 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Lferr_2443 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Lferr_0488 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Lferr_0486 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Lferr_2681 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Lferr_0507 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Lferr_0516 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Lferr_0504 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Lferr_0525 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Lferr_0513 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Lferr_2473 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Lferr_2240 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Lferr_0462 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Lferr_0502 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Lferr_0499 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Lferr_0508 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Lferr_1803 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D Lferr_0461 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Lferr_2295 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Lferr_0505 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Lferr_0515 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Lferr_0808 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Lferr_1579 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Lferr_2294 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Lferr_0036 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Lferr_2241 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Lferr_0520 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Lferr_R0009 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Lferr_R0052 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Lferr_R0012 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Lferr_R0049 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Lferr_R0054 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Lferr_R0055 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:afe00970] D Lferr_R0022 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Lferr_R0011 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Lferr_R0050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Lferr_R0038 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Lferr_R0016 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Lferr_R0014 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Lferr_R0044 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Lferr_R0030 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Lferr_R0025 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Lferr_R0021 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Lferr_R0018 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Lferr_R0045 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Lferr_R0046 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Lferr_R0039 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Lferr_R0032 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Lferr_R0005 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Lferr_R0017 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Lferr_R0040 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Lferr_R0047 tRNA-His K14226 tRNA-His; tRNA His D Lferr_R0010 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Lferr_R0051 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Lferr_R0035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Lferr_R0028 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Lferr_R0026 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Lferr_R0034 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Lferr_R0043 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Lferr_R0029 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Lferr_R0001 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Lferr_R0037 tRNA-Met K14230 tRNA-Met; tRNA Met D Lferr_R0053 tRNA-Met K14230 tRNA-Met; tRNA Met D Lferr_R0008 tRNA-Met K14230 tRNA-Met; tRNA Met D Lferr_R0002 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Lferr_R0036 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Lferr_R0041 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Lferr_R0048 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Lferr_R0015 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Lferr_R0031 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Lferr_R0027 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Lferr_R0006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Lferr_R0019 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Lferr_R0013 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Lferr_R0007 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Lferr_R0004 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Lferr_R0020 tRNA-Val K14237 tRNA-Val; tRNA Val D Lferr_R0042 tRNA-Val K14237 tRNA-Val; tRNA Val D Lferr_R0024 tRNA-Val K14237 tRNA-Val; tRNA Val D Lferr_0584 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Lferr_1876 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Lferr_1770 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Lferr_1769 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Lferr_1771 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Lferr_1052 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Lferr_0057 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Lferr_2209 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Lferr_2210 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Lferr_2243 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Lferr_0550 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Lferr_1875 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Lferr_2296 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Lferr_0021 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Lferr_1860 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Lferr_0619 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Lferr_0711 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Lferr_0640 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Lferr_0349 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Lferr_1791 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Lferr_1606 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Lferr_2239 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Lferr_2238 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Lferr_2686 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Lferr_1466 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:afe03060] D Lferr_0517 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Lferr_0484 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Lferr_2258 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Lferr_1715 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Lferr_1714 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Lferr_1716 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Lferr_0033 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Lferr_0401 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Lferr_1786 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D Lferr_2477 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Lferr_R0056 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA D Lferr_2373 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Lferr_2729 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Lferr_2657 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Lferr_2658 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB D Lferr_2659 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC D Lferr_1119 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Lferr_0710 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:afe04122] D Lferr_0822 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Lferr_1225 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Lferr_0188 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Lferr_1253 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Lferr_2187 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Lferr_0829 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Lferr_1090 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Lferr_2189 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Lferr_1089 thiamineS protein K03636 moaD; sulfur-carrier protein D Lferr_0802 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Lferr_2191 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Lferr_2821 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Lferr_0792 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:afe03018] D Lferr_1831 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D Lferr_1874 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12] D Lferr_0975 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Lferr_0559 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Lferr_1150 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Lferr_1565 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Lferr_0741 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Lferr_1851 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Lferr_0807 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Lferr_2291 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Lferr_0698 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Lferr_1559 RNA chaperone Hfq K03666 hfq; host factor-I protein D Lferr_1551 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Lferr_1566 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D Lferr_1451 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:afe03030] D Lferr_0564 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Lferr_1177 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Lferr_1591 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Lferr_1589 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Lferr_0617 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Lferr_1858 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Lferr_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Lferr_2442 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Lferr_1971 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Lferr_2466 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Lferr_1280 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Lferr_0140 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Lferr_0563 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Lferr_1176 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Lferr_2692 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Lferr_0903 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:afe03410] D Lferr_2306 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Lferr_2623 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Lferr_0623 DNA glycosylase/AP lyase, H2TH DNA-binding K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Lferr_2378 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Lferr_1527 HhH-GPD family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Lferr_2423 transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Lferr_2502 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Lferr_0353 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Lferr_0357 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Lferr_2692 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Lferr_0636 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Lferr_0903 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:afe03420] D Lferr_0539 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Lferr_2467 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Lferr_0971 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Lferr_0979 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Lferr_2699 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Lferr_0295 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Lferr_2692 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Lferr_0903 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:afe03430] D Lferr_1437 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Lferr_1972 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2 D Lferr_0891 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2 D Lferr_1599 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Lferr_2699 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Lferr_0295 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Lferr_1648 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Lferr_1644 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Lferr_1442 Exonuclease RNase T and DNA polymerase III K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D Lferr_0636 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Lferr_2466 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Lferr_1280 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Lferr_0140 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Lferr_1177 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Lferr_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Lferr_1591 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Lferr_0617 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Lferr_1589 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Lferr_0564 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Lferr_1858 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Lferr_0903 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Lferr_0139 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Lferr_1279 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:afe03440] D Lferr_0636 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Lferr_2466 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Lferr_1280 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Lferr_0140 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Lferr_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Lferr_1123 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Lferr_1593 recombination protein RecR K06187 recR; recombination protein RecR D Lferr_1050 recA protein K03553 recA; recombination protein RecA D Lferr_2692 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Lferr_0062 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Lferr_0063 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Lferr_0061 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Lferr_0722 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Lferr_2795 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Lferr_0965 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Lferr_2547 exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D Lferr_2546 exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D Lferr_2548 exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Lferr_1177 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Lferr_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Lferr_1591 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Lferr_0617 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Lferr_1589 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Lferr_0564 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Lferr_1858 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Lferr_0743 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:afe02010] D Lferr_1216 extracellular solute-binding protein family 1 K15495 wtpA; molybdate/tungstate transport system substrate-binding protein D Lferr_1848 binding-protein-dependent transport systems inner membrane component K15496 wtpB; molybdate/tungstate transport system permease protein D Lferr_1847 ABC transporter related K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6] D Lferr_1211 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Lferr_1505 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein D Lferr_0340 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein D Lferr_1773 hopanoid biosynthesis associated membrane protein HpnM K07323 mlaC; phospholipid transport system substrate-binding protein D Lferr_1794 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Lferr_0339 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Lferr_0798 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Lferr_0338 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Lferr_0341 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein D Lferr_0797 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Lferr_0337 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Lferr_1153 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Lferr_1611 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Lferr_1154 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Lferr_1612 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Lferr_1155 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Lferr_1613 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Lferr_1156 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Lferr_2574 lipopolysaccharide biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein D Lferr_2575 ABC-2 type transporter K09688 kpsM; capsular polysaccharide transport system permease protein D Lferr_2576 ABC transporter related K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D Lferr_2836 ABC-2 type transporter, NodJ family K09694 nodJ; lipooligosaccharide transport system permease protein D Lferr_2837 ABC transporter related K09695 nodI; lipooligosaccharide transport system ATP-binding protein D Lferr_0641 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Lferr_0642 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Lferr_1856 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein D Lferr_1855 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D Lferr_2634 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Lferr_2371 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Lferr_2372 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Lferr_1097 ABC transporter related K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Lferr_2316 type I secretion system ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D Lferr_1826 ABC transporter related K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D Lferr_2598 ABC transporter related K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D Lferr_1110 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D Lferr_1109 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D Lferr_0707 ABC transporter domain protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:afe02060] D Lferr_2625 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Lferr_2626 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Lferr_2628 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Lferr_2631 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:afe03070] D Lferr_0729 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Lferr_1827 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_1706 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_1759 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_2864 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_2315 type I secretion membrane fusion protein, HlyD family K11003 hlyD; membrane fusion protein, hemolysin D D Lferr_2316 type I secretion system ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D Lferr_1715 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Lferr_1714 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Lferr_0484 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Lferr_2258 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Lferr_0517 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Lferr_1716 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Lferr_0033 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Lferr_0401 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Lferr_2373 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Lferr_1786 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D Lferr_2477 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Lferr_2729 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Lferr_2657 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Lferr_2658 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB D Lferr_2659 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC D Lferr_0261 Lytic transglycosylase catalytic K03194 virB1; type IV secretion system protein VirB1 D Lferr_1397 Lytic transglycosylase catalytic K03194 virB1; type IV secretion system protein VirB1 D Lferr_1398 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D Lferr_0262 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:afe02020] D Lferr_1152 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Lferr_1918 putative two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Lferr_1949 putative two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Lferr_2550 putative two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Lferr_1151 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Lferr_1153 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Lferr_1611 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Lferr_0107 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Lferr_1957 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Lferr_2873 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Lferr_2872 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D Lferr_0108 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D Lferr_1958 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D Lferr_1346 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D Lferr_1117 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D Lferr_2863 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D Lferr_2057 conserved hypothetical protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF D Lferr_2407 conserved hypothetical protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF D Lferr_0199 conserved hypothetical protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF D Lferr_0174 conserved hypothetical protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF D Lferr_2061 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D Lferr_1618 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D Lferr_0171 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D Lferr_0172 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein D Lferr_2060 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein D Lferr_1617 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein D Lferr_1884 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Lferr_1883 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Lferr_1885 potassium-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D Lferr_2102 potassium-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D Lferr_2104 potassium-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D Lferr_1886 K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D Lferr_2101 K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D Lferr_1887 potassium-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit D Lferr_2100 potassium-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit D Lferr_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Lferr_0622 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D Lferr_1632 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45] D Lferr_0006 Spore coat U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D Lferr_0009 Spore coat U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D Lferr_0007 chaperone protein EcpD K07346 fimC; fimbrial chaperone protein D Lferr_0008 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D Lferr_2332 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA D Lferr_2327 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D Lferr_2326 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC D Lferr_2325 response regulator receiver domain protein (CheY-like) K02282 cpaE; pilus assembly protein CpaE D Lferr_2324 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Lferr_2323 type II secretion system protein K12510 tadB; tight adherence protein B D Lferr_2322 type II secretion system protein K12511 tadC; tight adherence protein C D Lferr_2321 Tetratricopeptide TPR_2 repeat protein K27079 tadD; tight adherence protein D D Lferr_2319 membrane protein K27080 tadG; tight adherence protein G D Lferr_1043 UTP-GlnB uridylyltransferase, GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D Lferr_0591 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D Lferr_2086 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D Lferr_2520 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Lferr_2519 nitrogen metabolism transcriptional regulator, NtrC, Fis Family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D Lferr_0626 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Lferr_0024 integral membrane sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D Lferr_0025 two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D Lferr_1244 transcriptional regulator, NifA, Fis Family K02584 nifA; Nif-specific regulatory protein D Lferr_0028 integral membrane sensor signal transduction histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D Lferr_0029 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC D Lferr_0363 signal transduction histidine kinase, nitrogen specific, NtrB K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D Lferr_0364 two component, sigma54 specific, transcriptional regulator, Fis family K02667 pilR; two-component system, NtrC family, response regulator PilR D Lferr_2633 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D Lferr_0578 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA D Lferr_0610 integral membrane sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D Lferr_2570 integral membrane sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D Lferr_2568 two component, sigma54 specific, transcriptional regulator, Fis family K07715 glrR; two-component system, NtrC family, response regulator GlrR D Lferr_0608 two component, sigma54 specific, transcriptional regulator, Fis family K07715 glrR; two-component system, NtrC family, response regulator GlrR D Lferr_0849 NADH ubiquinone oxidoreductase 20 kDa subunit K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6] D Lferr_0850 Hydrogen:quinone oxidoreductase K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6] D Lferr_0848 two component, sigma54 specific, transcriptional regulator, Fis family K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA D Lferr_2881 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Lferr_2884 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Lferr_0173 cytochrome B561 K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit D Lferr_2058 cytochrome B561 K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit D Lferr_1978 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Lferr_2735 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D Lferr_2736 two component transcriptional regulator, Fis family K15012 regA; two-component system, response regulator RegA D Lferr_2707 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Lferr_2351 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Lferr_2352 Cytochrome b/b6 domain K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Lferr_2708 Cytochrome b/b6 domain K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Lferr_2353 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D Lferr_2709 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D Lferr_1630 cytochrome c class I K08738 CYC; cytochrome c D Lferr_2076 cytochrome c class I K08738 CYC; cytochrome c D Lferr_1070 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Lferr_1069 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Lferr_0729 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Lferr_1827 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_1706 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_1759 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_2864 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_2589 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D Lferr_1666 autoinducer synthesis protein K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D Lferr_2707 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Lferr_2351 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:afe02024] D Lferr_1559 RNA chaperone Hfq K03666 hfq; host factor-I protein D Lferr_2846 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Lferr_2845 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Lferr_1666 autoinducer synthesis protein K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184] D Lferr_0610 integral membrane sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D Lferr_2570 integral membrane sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D Lferr_2568 two component, sigma54 specific, transcriptional regulator, Fis family K07715 glrR; two-component system, NtrC family, response regulator GlrR D Lferr_0608 two component, sigma54 specific, transcriptional regulator, Fis family K07715 glrR; two-component system, NtrC family, response regulator GlrR D Lferr_1883 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Lferr_1334 P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D Lferr_0244 P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D Lferr_0245 Conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC D Lferr_0246 hypothetical protein K20529 trbD; type IV secretion system protein TrbD D Lferr_1338 hypothetical protein K20529 trbD; type IV secretion system protein TrbD D Lferr_1339 CagE TrbE VirB component of type IV transporter system K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D Lferr_0247 CagE TrbE VirB component of type IV transporter system K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D Lferr_0249 P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D Lferr_1341 P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D Lferr_1343 P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D Lferr_0251 P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D Lferr_1392 conjugal transfer protein K20531 trbF; type IV secretion system protein TrbF D Lferr_0256 conjugal transfer protein K20531 trbF; type IV secretion system protein TrbF D Lferr_1393 Conjugal transfer protein TrbG/VirB9/CagX K20532 trbG; type IV secretion system protein TrbG D Lferr_1394 hypothetical protein K20532 trbG; type IV secretion system protein TrbG D Lferr_0258 hypothetical protein K20532 trbG; type IV secretion system protein TrbG D Lferr_0257 Conjugal transfer protein TrbG/VirB9/CagX K20532 trbG; type IV secretion system protein TrbG D Lferr_0259 conjugation TrbI family protein K20533 trbI; type IV secretion system protein TrbI D Lferr_1395 conjugation TrbI family protein K20533 trbI; type IV secretion system protein TrbI D Lferr_0397 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Lferr_1978 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Lferr_0473 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Lferr_2314 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system D Lferr_2600 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Lferr_2605 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Lferr_2604 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Lferr_2603 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Lferr_2602 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Lferr_0033 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Lferr_0484 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Lferr_2258 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Lferr_0517 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Lferr_1716 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Lferr_0401 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Lferr_2373 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Lferr_1786 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D Lferr_2477 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly [PATH:afe02040] D Lferr_1970 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D Lferr_2633 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Lferr_0975 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:afe01501] D Lferr_1629 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D Lferr_2447 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Lferr_1554 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Lferr_0110 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Lferr_1553 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Lferr_0111 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Lferr_2314 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system D Lferr_0729 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Lferr_1827 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_1706 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_1759 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_2864 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_1877 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Lferr_2195 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Lferr_1802 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Lferr_0391 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Lferr_2515 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:afe01502] D Lferr_0622 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D Lferr_0382 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Lferr_2441 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Lferr_0389 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Lferr_0388 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Lferr_0385 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:afe01503] D Lferr_1994 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Lferr_1346 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D Lferr_1117 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D Lferr_1554 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Lferr_0110 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Lferr_1553 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Lferr_0111 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Lferr_0729 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Lferr_1827 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_1706 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_1759 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_2864 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_1172 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:afe01000] C 01001 Protein kinases [BR:afe01001] D Lferr_1152 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Lferr_0107 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Lferr_1957 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Lferr_2873 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Lferr_1884 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Lferr_1695 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Lferr_2520 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Lferr_0024 integral membrane sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D Lferr_0028 integral membrane sensor signal transduction histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D Lferr_0363 signal transduction histidine kinase, nitrogen specific, NtrB K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D Lferr_0610 integral membrane sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D Lferr_2570 integral membrane sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D Lferr_2735 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:afe01009] D Lferr_0691 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Lferr_2755 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Lferr_0285 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D Lferr_0538 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:afe01002] D Lferr_0710 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Lferr_0365 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Lferr_2329 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D Lferr_2879 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Lferr_1054 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Lferr_0853 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Lferr_1454 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Lferr_2158 GMP synthase - Glutamine amidotransferase domain-like protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Lferr_2155 peptidase C26 K07010 K07010; putative glutamine amidotransferase D Lferr_1826 ABC transporter related K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D Lferr_1722 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Lferr_0878 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Lferr_2804 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Lferr_1672 ThiJ/PfpI domain protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D Lferr_0552 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D Lferr_2202 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D Lferr_1548 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Lferr_2299 peptidase M3A and M3B thimet/oligopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D Lferr_0622 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D Lferr_1857 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Lferr_1496 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Lferr_1044 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Lferr_2438 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Lferr_2262 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Lferr_1746 peptidase M48 Ste24p K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D Lferr_0423 peptidase M48 Ste24p K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D Lferr_1167 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Lferr_1346 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D Lferr_1117 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D Lferr_2197 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Lferr_1985 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Lferr_2538 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Lferr_1830 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D Lferr_1628 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Lferr_1031 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Lferr_0997 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Lferr_1033 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Lferr_1543 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88] D Lferr_1119 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Lferr_0682 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Lferr_0950 peptidase S45 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11] D Lferr_1737 signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-] D Lferr_1088 Peptidase S49 domain protein K04774 sohB; serine protease SohB [EC:3.4.21.-] D Lferr_2367 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D Lferr_0928 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] D Lferr_2344 peptidase U32 K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV D Lferr_2345 peptidase U32 K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU D Lferr_0753 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein D Lferr_2263 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein D Lferr_1900 alpha-2-macroglobulin domain protein K06894 yfhM; alpha-2-macroglobulin D Lferr_1562 HflC protein K04087 hflC; modulator of FtsH protease HflC D Lferr_1561 HflK protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:afe01003] D Lferr_1780 hopanoid biosynthesis associated glycosyl transferase protein HpnI K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80] D Lferr_1143 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Lferr_2303 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Lferr_1901 glycosyl transferase family 51 K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D Lferr_1877 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Lferr_1077 glycosyl transferase family 2 K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D Lferr_1268 Sucrose synthase K00695 SUS; sucrose synthase [EC:2.4.1.13] C 01005 Lipopolysaccharide biosynthesis proteins [BR:afe01005] D Lferr_1172 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Lferr_1175 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Lferr_0399 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Lferr_1170 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Lferr_1656 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Lferr_0649 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Lferr_0414 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Lferr_0413 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Lferr_2302 3-deoxy-D-manno-octulosonic-acid transferase-like protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Lferr_0435 conserved hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D Lferr_1506 conserved hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D Lferr_0974 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Lferr_0651 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Lferr_2637 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Lferr_2638 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Lferr_1129 rfaE bifunctional protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D Lferr_0411 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D Lferr_0311 lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D Lferr_0408 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26] D Lferr_0862 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D Lferr_2211 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D Lferr_1635 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D Lferr_1452 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:afe01011] D Lferr_2648 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Lferr_0383 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Lferr_0384 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Lferr_0387 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Lferr_0390 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Lferr_0382 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Lferr_2441 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Lferr_2463 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Lferr_0388 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Lferr_0385 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Lferr_0787 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Lferr_0714 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Lferr_1877 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Lferr_1901 glycosyl transferase family 51 K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D Lferr_2195 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Lferr_1802 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Lferr_0391 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Lferr_2515 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Lferr_2197 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Lferr_1985 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Lferr_2538 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Lferr_1628 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Lferr_1830 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D Lferr_0552 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D Lferr_2202 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D Lferr_0622 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D Lferr_1059 Lytic transglycosylase catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Lferr_1503 lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D Lferr_0583 Lytic transglycosylase catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D Lferr_1587 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Lferr_1495 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Lferr_2535 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Lferr_1994 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Lferr_2219 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:afe01004] D Lferr_1582 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Lferr_1581 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Lferr_0939 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Lferr_1585 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Lferr_0936 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Lferr_1583 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Lferr_1171 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Lferr_0582 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Lferr_1632 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45] D Lferr_1637 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Lferr_0397 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Lferr_1580 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Lferr_0125 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Lferr_0059 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Lferr_2212 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:afe01006] D Lferr_1643 Polyprenyl synthetase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D Lferr_2517 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Lferr_1164 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Lferr_1784 Squalene synthase K10208 crtM; 4,4'-diapophytoene synthase [EC:2.5.1.96] D Lferr_1600 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Lferr_0744 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Lferr_0785 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Lferr_2741 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:afe01007] D Lferr_0584 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Lferr_1876 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Lferr_1046 Glutamate--tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D Lferr_2686 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Lferr_1466 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Lferr_1875 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Lferr_0349 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Lferr_2296 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Lferr_0711 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Lferr_1860 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Lferr_0619 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Lferr_0640 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Lferr_0057 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Lferr_1606 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Lferr_2209 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Lferr_2210 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Lferr_0550 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Lferr_1791 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Lferr_2243 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Lferr_1052 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Lferr_2239 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Lferr_2238 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Lferr_1687 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Lferr_0632 aminotransferase class I and II K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D Lferr_1498 aminotransferase class I and II K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D Lferr_1020 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Lferr_2651 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Lferr_2618 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Lferr_0419 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Lferr_0415 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Lferr_0570 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Lferr_1596 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Lferr_2901 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Lferr_0703 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Lferr_1017 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Lferr_1256 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:afe00194] D Lferr_2806 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Lferr_2053 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Lferr_0904 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Lferr_2807 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Lferr_2808 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Lferr_2809 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Lferr_2810 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Lferr_2811 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Lferr_2812 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Lferr_2813 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:afe03000] D Lferr_2423 transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Lferr_1003 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D Lferr_0306 transcriptional regulator, LysR family K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D Lferr_0847 transcriptional regulator, LysR family K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D Lferr_1662 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D Lferr_0989 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D Lferr_1390 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D Lferr_1817 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D Lferr_0351 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D Lferr_0958 transcriptional regulator, LysR family K21711 pycR; LysR family transcriptional regulator, putative pyruvate carboxylase regulator D Lferr_1934 transcriptional regulator, GntR family K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D Lferr_0432 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator D Lferr_1864 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Lferr_1659 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Lferr_1843 transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D Lferr_0164 transcriptional regulator, MerR family K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D Lferr_0159 transcriptional regulator, MerR family K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D Lferr_2109 mercuric resistence transcriptional repressor, MerD, MerR family K19057 merD; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D Lferr_0543 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D Lferr_0458 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Lferr_1183 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Lferr_1623 ferric uptake regulator, Fur family K09826 irr; Fur family transcriptional regulator, iron response regulator D Lferr_1365 transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D Lferr_1978 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Lferr_0120 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Lferr_0447 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Lferr_1356 transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D Lferr_0981 transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D Lferr_0821 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D Lferr_2739 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D Lferr_2841 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D Lferr_0208 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Lferr_0191 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Lferr_2480 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Lferr_0187 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Lferr_0614 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Lferr_0371 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Lferr_1274 transcriptional regulator, XRE family K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor D Lferr_0134 transcriptional regulator, XRE family K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor D Lferr_0842 sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Lferr_1244 transcriptional regulator, NifA, Fis Family K02584 nifA; Nif-specific regulatory protein D Lferr_0871 putative transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein D Lferr_0814 BolA family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D Lferr_2815 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Lferr_1410 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Lferr_0272 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Lferr_2293 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D Lferr_0599 amino acid-binding ACT domain protein K03567 gcvR; glycine cleavage system transcriptional repressor D Lferr_2667 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Lferr_1673 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator D Lferr_2433 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator D Lferr_2763 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator D Lferr_2669 protein of unknown function DUF179 K07735 algH; putative transcriptional regulator D Lferr_1181 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Lferr_0472 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR D Lferr_0394 MraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:afe03021] D Lferr_0524 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Lferr_0490 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Lferr_0491 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Lferr_0718 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Lferr_1970 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D Lferr_0630 RNA polymerase, sigma 70 subunit, RpoD family K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D Lferr_1508 RNA polymerase, sigma 70 subunit, RpoD family K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D Lferr_1975 RNA polymerase, sigma 32 subunit, RpoH K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D Lferr_1115 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Lferr_2370 RNA polymerase, sigma 32 subunit, RpoH K03089 rpoH; RNA polymerase sigma-32 factor D Lferr_2633 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D Lferr_0554 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Lferr_0477 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Lferr_0485 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Lferr_0398 Glutathione S-transferase domain K03599 sspA; stringent starvation protein A D Lferr_0369 Stringent starvation protein B K03600 sspB; stringent starvation protein B D Lferr_1181 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Lferr_0788 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D Lferr_0807 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Lferr_0551 transcriptional antiterminator, Rof K19000 rof; Rho-binding antiterminator C 03019 Messenger RNA biogenesis [BR:afe03019] D Lferr_1874 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12] D Lferr_2567 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Lferr_1121 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Lferr_1565 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Lferr_1959 Exonuclease RNase T and DNA polymerase III K13288 orn; oligoribonuclease [EC:3.1.-.-] D Lferr_1150 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Lferr_0741 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Lferr_1851 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Lferr_0975 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Lferr_0559 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Lferr_0807 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Lferr_2291 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Lferr_0698 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Lferr_1559 RNA chaperone Hfq K03666 hfq; host factor-I protein D Lferr_1551 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Lferr_1566 protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D Lferr_1451 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D Lferr_1831 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D Lferr_2629 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:afe03011] D Lferr_1025 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D Lferr_1160 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Lferr_0503 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Lferr_0523 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Lferr_0514 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Lferr_2446 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Lferr_0493 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Lferr_0511 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Lferr_2680 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Lferr_0496 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Lferr_0522 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Lferr_0492 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Lferr_0521 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Lferr_0510 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Lferr_0558 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Lferr_2476 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Lferr_0506 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Lferr_2445 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Lferr_0501 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Lferr_1846 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Lferr_1974 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Lferr_0487 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Lferr_0500 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Lferr_0497 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Lferr_0498 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Lferr_0509 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Lferr_0512 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Lferr_2443 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Lferr_0488 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Lferr_0486 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Lferr_0489 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Lferr_2681 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Lferr_0507 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Lferr_0516 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Lferr_0504 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Lferr_0525 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Lferr_0513 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Lferr_2473 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Lferr_2240 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Lferr_0462 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Lferr_0502 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Lferr_0499 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Lferr_0508 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Lferr_0461 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Lferr_2295 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Lferr_0505 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Lferr_0515 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Lferr_0808 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Lferr_1579 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Lferr_2294 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Lferr_0036 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Lferr_2241 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Lferr_0520 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Lferr_1803 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D Lferr_R0054 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Lferr_R0055 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Lferr_R0009 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Lferr_R0052 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Lferr_R0012 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Lferr_R0049 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:afe03009] D Lferr_1121 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Lferr_1959 Exonuclease RNase T and DNA polymerase III K13288 orn; oligoribonuclease [EC:3.1.-.-] D Lferr_1122 GTP-binding protein Era K03595 era; GTPase D Lferr_0460 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-] D Lferr_1181 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Lferr_0554 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Lferr_0477 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Lferr_0485 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Lferr_1833 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Lferr_0346 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Lferr_0022 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Lferr_2374 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Lferr_2857 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Lferr_2817 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Lferr_0393 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Lferr_0317 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Lferr_1105 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Lferr_2357 ribosomal RNA methyltransferase RrmJ/FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D Lferr_2563 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Lferr_1014 methyltransferase small K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Lferr_0355 protein of unknown function DUF519 K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D Lferr_1602 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Lferr_2450 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Lferr_1982 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Lferr_1470 RNA-binding S4 domain protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Lferr_1873 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D Lferr_0593 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Lferr_2145 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Lferr_2213 alpha-L-glutamate ligase, RimK family K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D Lferr_2475 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D Lferr_0127 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Lferr_1753 protein of unknown function DUF181 K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D Lferr_0373 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Lferr_0352 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D Lferr_1874 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12] D Lferr_2567 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Lferr_2668 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Lferr_0741 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Lferr_1609 small GTP-binding protein K03977 engA; GTPase D Lferr_1560 GTP-binding proten HflX K03665 hflX; GTPase D Lferr_1909 SUA5/yciO/yrdC domain K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Lferr_1371 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Lferr_0719 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Lferr_0556 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Lferr_0553 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP D Lferr_2562 iojap-like protein K09710 ybeB; ribosome-associated protein D Lferr_0750 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor D Lferr_2358 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein D Lferr_2632 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor D Lferr_1805 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D Lferr_1578 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:afe03016] D Lferr_1450 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Lferr_0396 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Lferr_0584 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Lferr_1791 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Lferr_0711 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Lferr_0619 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Lferr_2296 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Lferr_0349 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Lferr_0640 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Lferr_0057 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Lferr_1052 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Lferr_2243 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Lferr_0550 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Lferr_1875 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Lferr_1860 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Lferr_1606 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Lferr_2239 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Lferr_2238 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Lferr_2686 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Lferr_1466 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Lferr_2900 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Lferr_0448 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Lferr_1729 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Lferr_0557 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Lferr_0542 tRNA pseudouridine synthase D TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D Lferr_0822 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Lferr_1225 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Lferr_0188 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Lferr_1253 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Lferr_1909 SUA5/yciO/yrdC domain K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Lferr_1371 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Lferr_1600 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Lferr_0032 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Lferr_2818 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Lferr_2587 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Lferr_0035 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Lferr_R0003 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA D Lferr_0427 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D Lferr_1977 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Lferr_0037 ABC transporter related K06020 ettA; energy-dependent translational throttle protein EttA D Lferr_2209 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Lferr_2210 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Lferr_1046 Glutamate--tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D Lferr_1876 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Lferr_0888 CMP/dCMP deaminase zinc-binding K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Lferr_1692 dihydrouridine synthase DuS K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D Lferr_0748 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Lferr_2474 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Lferr_0819 RNA methyltransferase, TrmH family, group 1 K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D Lferr_0417 RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Lferr_0829 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Lferr_1130 PP-loop domain protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D Lferr_2187 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Lferr_0824 iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D Lferr_1247 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D Lferr_1112 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D Lferr_1718 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Lferr_0069 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Lferr_0070 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Lferr_0899 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Lferr_2217 protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D Lferr_1717 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Lferr_1179 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Lferr_2146 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Lferr_0123 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Lferr_1598 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Lferr_2016 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D Lferr_1565 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Lferr_0559 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Lferr_2391 PIN (PilT N terminus) domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D Lferr_1788 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D Lferr_0638 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D Lferr_2281 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:afe03012] D Lferr_0555 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Lferr_2242 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Lferr_1161 translation elongation factor Ts K02357 tsf; elongation factor Ts D Lferr_0483 translation elongation factor Tu K02358 tuf; elongation factor Tu D Lferr_0495 translation elongation factor Tu K02358 tuf; elongation factor Tu D Lferr_0494 translation elongation factor G K02355 fusA; elongation factor G D Lferr_2380 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D Lferr_1163 ribosome recycling factor K02838 frr; ribosome recycling factor D Lferr_2379 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Lferr_1804 Aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Lferr_0519 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D Lferr_0977 translation elongation factor P K02356 efp; elongation factor P D Lferr_2144 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:afe03110] D Lferr_0678 ATP-dependent Clp protease, ATP-binding subunit clpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D Lferr_1638 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Lferr_1032 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Lferr_2368 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D Lferr_2755 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Lferr_2291 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Lferr_0826 Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA D Lferr_0698 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Lferr_2290 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Lferr_2700 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein D Lferr_0825 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB D Lferr_1131 Hsp33 protein K04083 hslO; molecular chaperone Hsp33 D Lferr_2292 GrpE protein K03687 GRPE; molecular chaperone GrpE D Lferr_1347 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Lferr_1743 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Lferr_0996 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Lferr_0699 chaperonin Cpn10 K04078 groES; chaperonin GroES D Lferr_1346 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D Lferr_1117 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D Lferr_2262 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Lferr_2813 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Lferr_0007 chaperone protein EcpD K07346 fimC; fimbrial chaperone protein D Lferr_1786 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D Lferr_2885 hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D Lferr_0865 hydrogenase expression/synthesis HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D Lferr_2886 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D Lferr_0866 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D Lferr_1838 hypothetical protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Lferr_1655 peptidyl-prolyl cis-trans isomerase cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Lferr_1036 hypothetical protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D Lferr_0359 peptidylprolyl isomerase FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D Lferr_0680 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Lferr_2644 SurA domain K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D Lferr_0806 thioredoxin K03671 TXN; thioredoxin D Lferr_1647 thioredoxin K03671 TXN; thioredoxin D Lferr_2220 conserved hypothetical protein K03671 TXN; thioredoxin D Lferr_1995 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D Lferr_2469 thioredoxin K05838 ybbN; putative thioredoxin D Lferr_1996 glutaredoxin 3 K03676 grxC; glutaredoxin 3 D Lferr_2075 glutaredoxin K03676 grxC; glutaredoxin 3 D Lferr_2647 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin D Lferr_0701 cytochrome c biogenesis protein transmembrane region K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D Lferr_1547 hypothetical protein K03805 dsbG; thiol:disulfide interchange protein DsbG D Lferr_2560 hypothetical protein K03805 dsbG; thiol:disulfide interchange protein DsbG D Lferr_1615 disulfide isomerase/thiol-disulfide oxidase K03805 dsbG; thiol:disulfide interchange protein DsbG D Lferr_1896 hypothetical protein K03805 dsbG; thiol:disulfide interchange protein DsbG D Lferr_0452 hypothetical protein K03805 dsbG; thiol:disulfide interchange protein DsbG C 04131 Membrane trafficking [BR:afe04131] D Lferr_1601 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Lferr_2852 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Lferr_0897 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Lferr_2850 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Lferr_1478 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Lferr_2755 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:afe04121] C 03051 Proteasome [BR:afe03051] D Lferr_2755 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:afe03032] D Lferr_0563 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Lferr_1035 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Lferr_2096 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Lferr_1294 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Lferr_2237 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Lferr_1293 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D Lferr_1296 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D Lferr_1026 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D Lferr_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Lferr_2442 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Lferr_0137 IstB domain protein ATP-binding protein K02315 dnaC; DNA replication protein DnaC D Lferr_1277 IstB domain protein ATP-binding protein K02315 dnaC; DNA replication protein DnaC D Lferr_1971 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Lferr_2466 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Lferr_1280 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Lferr_0140 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Lferr_1177 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Lferr_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Lferr_1858 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Lferr_0617 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Lferr_1589 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Lferr_0564 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Lferr_1591 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Lferr_1176 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Lferr_2692 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Lferr_0903 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Lferr_0139 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Lferr_1279 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Lferr_1576 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D Lferr_1016 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Lferr_0004 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Lferr_1693 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Lferr_1694 DNA topoisomerase (ATP-hydrolyzing) K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Lferr_0016 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Lferr_0283 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] D Lferr_1425 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:afe03036] D Lferr_1121 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Lferr_1035 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Lferr_2096 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Lferr_1294 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Lferr_2237 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Lferr_1293 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D Lferr_1296 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D Lferr_1026 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D Lferr_2700 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein D Lferr_2701 transcriptional regulator, MerR family K18997 cbpM; chaperone modulatory protein CbpM D Lferr_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Lferr_0371 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Lferr_1559 RNA chaperone Hfq K03666 hfq; host factor-I protein D Lferr_1659 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Lferr_0900 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D Lferr_1467 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A D Lferr_1468 segregation and condensation protein B K06024 scpB; segregation and condensation protein B D Lferr_0380 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Lferr_0976 Septum formation initiator K05589 ftsB; cell division protein FtsB D Lferr_2372 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Lferr_0391 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Lferr_2515 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Lferr_0546 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Lferr_0392 cell division protein FtsL K03586 ftsL; cell division protein FtsL D Lferr_0381 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ D Lferr_0386 cell division protein FtsW K03588 ftsW; cell division protein FtsW D Lferr_2371 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Lferr_0379 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Lferr_1800 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA D Lferr_0367 protein of unknown function DUF1342 K18778 zapD; cell division protein ZapD D Lferr_1994 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Lferr_1554 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Lferr_0110 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Lferr_0014 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Lferr_0013 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Lferr_0012 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Lferr_0010 Septum formation topological specificity factor MinE K03608 minE; cell division topological specificity factor D Lferr_1544 conserved hypothetical protein K13053 sulA; cell division inhibitor SulA D Lferr_2192 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Lferr_2193 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Lferr_2194 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D Lferr_2196 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D Lferr_0273 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Lferr_1378 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Lferr_2816 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Lferr_1550 putative partition-related protein K03496 parA; chromosome partitioning protein D Lferr_1411 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Lferr_2815 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Lferr_1410 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Lferr_0272 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Lferr_1693 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Lferr_1694 DNA topoisomerase (ATP-hydrolyzing) K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Lferr_2818 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Lferr_2817 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Lferr_2366 integrase family protein K03733 xerC; integrase/recombinase XerC D Lferr_2026 integrase domain protein SAM domain protein K03733 xerC; integrase/recombinase XerC D Lferr_2471 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D Lferr_2030 integrase family protein K04763 xerD; integrase/recombinase XerD D Lferr_0327 integrase family protein K04763 xerD; integrase/recombinase XerD D Lferr_0668 integrase family protein K04763 xerD; integrase/recombinase XerD D Lferr_2287 ATP-binding protein involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning D Lferr_0094 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Lferr_2690 GTP-binding protein HSR1-related K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:afe03400] D Lferr_1269 methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Lferr_2422 methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Lferr_2623 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Lferr_2306 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Lferr_0403 mutator MutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Lferr_0526 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Lferr_2502 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Lferr_1527 HhH-GPD family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Lferr_2423 transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Lferr_0623 DNA glycosylase/AP lyase, H2TH DNA-binding K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Lferr_2378 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Lferr_0353 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Lferr_0357 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Lferr_0636 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Lferr_0903 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Lferr_2692 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Lferr_2467 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Lferr_0971 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Lferr_0979 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Lferr_2699 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Lferr_0295 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Lferr_0490 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Lferr_0491 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Lferr_0524 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Lferr_0718 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Lferr_0539 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Lferr_1437 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Lferr_1972 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2 D Lferr_0891 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2 D Lferr_1599 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Lferr_1648 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Lferr_1644 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Lferr_1442 Exonuclease RNase T and DNA polymerase III K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D Lferr_1177 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Lferr_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Lferr_1858 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Lferr_0617 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Lferr_1589 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Lferr_0564 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Lferr_1591 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Lferr_2466 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Lferr_1280 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Lferr_0140 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Lferr_0139 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Lferr_1279 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Lferr_2547 exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D Lferr_2546 exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D Lferr_2548 exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Lferr_1050 recA protein K03553 recA; recombination protein RecA D Lferr_0062 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Lferr_0063 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Lferr_0061 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Lferr_0743 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Lferr_2440 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Lferr_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D Lferr_0722 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Lferr_2795 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Lferr_0965 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Lferr_1123 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Lferr_1593 recombination protein RecR K06187 recR; recombination protein RecR D Lferr_0611 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Lferr_1016 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Lferr_0004 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Lferr_0016 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Lferr_1035 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Lferr_2096 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Lferr_1294 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Lferr_0371 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Lferr_2237 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Lferr_1293 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D Lferr_1296 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D Lferr_1026 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D Lferr_1851 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Lferr_2280 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Lferr_1432 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Lferr_1543 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88] D Lferr_1545 conserved hypothetical protein K14161 imuB; protein ImuB D Lferr_1546 DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D Lferr_1051 regulatory protein RecX K03565 recX; regulatory protein D Lferr_2703 PHP domain protein K02347 polX; DNA polymerase (family X) D Lferr_1845 UvrD/REP helicase K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D Lferr_2147 helicase c2 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D Lferr_2264 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Lferr_2265 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:afe03029] D Lferr_2352 Cytochrome b/b6 domain K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Lferr_2708 Cytochrome b/b6 domain K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Lferr_0555 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Lferr_2242 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Lferr_1161 translation elongation factor Ts K02357 tsf; elongation factor Ts D Lferr_0483 translation elongation factor Tu K02358 tuf; elongation factor Tu D Lferr_0495 translation elongation factor Tu K02358 tuf; elongation factor Tu D Lferr_0494 translation elongation factor G K02355 fusA; elongation factor G D Lferr_1122 GTP-binding protein Era K03595 era; GTPase D Lferr_2686 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Lferr_0619 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Lferr_0057 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Lferr_0349 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Lferr_1770 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Lferr_1769 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Lferr_1771 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Lferr_2466 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Lferr_1280 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Lferr_0140 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Lferr_1168 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family D Lferr_2291 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Lferr_2292 GrpE protein K03687 GRPE; molecular chaperone GrpE D Lferr_0698 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Lferr_0699 chaperonin Cpn10 K04078 groES; chaperonin GroES D Lferr_2290 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Lferr_1071 beta-lactamase domain protein K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18] D Lferr_0822 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Lferr_1225 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Lferr_0188 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Lferr_1253 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Lferr_0825 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB D Lferr_2647 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin D Lferr_2287 ATP-binding protein involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning D Lferr_0785 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Lferr_2741 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Lferr_0033 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Lferr_2755 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:afe02000] D Lferr_1097 ABC transporter related K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Lferr_2316 type I secretion system ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D Lferr_1826 ABC transporter related K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D Lferr_2598 ABC transporter related K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D Lferr_0768 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Lferr_1110 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D Lferr_1109 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D Lferr_0707 ABC transporter domain protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D Lferr_2512 ABC transporter related K15738 uup; ABC transport system ATP-binding/permease protein D Lferr_1211 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Lferr_1216 extracellular solute-binding protein family 1 K15495 wtpA; molybdate/tungstate transport system substrate-binding protein D Lferr_1848 binding-protein-dependent transport systems inner membrane component K15496 wtpB; molybdate/tungstate transport system permease protein D Lferr_1847 ABC transporter related K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6] D Lferr_0426 conserved hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein D Lferr_1794 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Lferr_0339 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Lferr_0798 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Lferr_0338 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Lferr_0797 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Lferr_0337 ABC transporter related K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Lferr_1793 conserved hypothetical protein K18480 linN; cholesterol transport system auxiliary component D Lferr_1505 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein D Lferr_0340 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein D Lferr_1773 hopanoid biosynthesis associated membrane protein HpnM K07323 mlaC; phospholipid transport system substrate-binding protein D Lferr_0341 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein D Lferr_1153 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Lferr_1611 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Lferr_1154 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Lferr_1612 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Lferr_1155 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Lferr_1613 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Lferr_1156 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Lferr_2600 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Lferr_2605 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Lferr_2604 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Lferr_2603 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Lferr_2602 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Lferr_1204 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Lferr_1212 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Lferr_1205 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Lferr_1213 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Lferr_1206 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Lferr_0754 periplasmic solute binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D Lferr_0757 ABC-3 protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein D Lferr_0756 ABC-3 protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein D Lferr_0755 ABC transporter related K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D Lferr_2575 ABC-2 type transporter K09688 kpsM; capsular polysaccharide transport system permease protein D Lferr_2574 lipopolysaccharide biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein D Lferr_2576 ABC transporter related K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D Lferr_1856 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein D Lferr_1855 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D Lferr_2634 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Lferr_2836 ABC-2 type transporter, NodJ family K09694 nodJ; lipooligosaccharide transport system permease protein D Lferr_2837 ABC transporter related K09695 nodI; lipooligosaccharide transport system ATP-binding protein D Lferr_2485 ABC-2 type transporter K25180 ybhR; drug efflux transport system permease protein D Lferr_2484 ABC-2 type transporter K25181 ybhS; drug efflux transport system permease protein D Lferr_2483 ABC transporter related K25182 ybhF; drug efflux transport system ATP-binding protein D Lferr_2482 secretion protein HlyD family protein K25183 ybhG; membrane fusion protein YbhG D Lferr_0641 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Lferr_0642 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Lferr_2371 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Lferr_2372 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Lferr_1763 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Lferr_2645 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Lferr_2233 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Lferr_0342 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Lferr_1762 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Lferr_2760 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Lferr_0104 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Lferr_0804 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Lferr_0103 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Lferr_0805 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Lferr_0205 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Lferr_1953 sugar transporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter D Lferr_1639 major facilitator superfamily MFS_1 K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D Lferr_1629 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D Lferr_1984 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D Lferr_1842 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D Lferr_1474 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D Lferr_1747 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D Lferr_0988 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D Lferr_0041 major facilitator superfamily MFS_1 K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D Lferr_0350 major facilitator superfamily MFS_1 K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D Lferr_1645 major facilitator superfamily MFS_1 K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D Lferr_1968 major facilitator superfamily MFS_1 K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D Lferr_1924 major facilitator superfamily MFS_1 K08368 yaaU; MFS transporter, putative metabolite transport protein D Lferr_2894 General substrate transporter K08368 yaaU; MFS transporter, putative metabolite transport protein D Lferr_2625 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Lferr_2626 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Lferr_2628 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Lferr_2631 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D Lferr_0333 major intrinsic protein K06188 aqpZ; aquaporin Z D Lferr_2537 Ion transport 2 domain protein K10716 kch; voltage-gated potassium channel D Lferr_2691 Ion transport 2 domain protein K10716 kch; voltage-gated potassium channel D Lferr_2526 ammonium transporter K03320 amt; ammonium transporter, Amt family D Lferr_2531 ammonium transporter K03320 amt; ammonium transporter, Amt family D Lferr_1594 Rh family protein/ammonium transporter K03320 amt; ammonium transporter, Amt family D Lferr_2223 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Lferr_1190 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Lferr_0356 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Lferr_0467 Glutathione S-transferase domain K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Lferr_0398 Glutathione S-transferase domain K03599 sspA; stringent starvation protein A D Lferr_1441 protein of unknown function UPF0005 K19416 yccA; modulator of FtsH protease D Lferr_2860 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel D Lferr_1461 MscS Mechanosensitive ion channel K05802 mscK; potassium-dependent mechanosensitive channel D Lferr_0645 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D Lferr_0911 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D Lferr_1200 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D Lferr_2613 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D Lferr_1917 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D Lferr_1920 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D Lferr_1942 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D Lferr_2614 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D Lferr_0912 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D Lferr_1916 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D Lferr_1201 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D Lferr_1943 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D Lferr_0646 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D Lferr_0065 protein TolQ K03562 tolQ; biopolymer transport protein TolQ D Lferr_0066 protein TolR K03560 tolR; biopolymer transport protein TolR D Lferr_2823 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter D Lferr_2825 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter D Lferr_2822 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter D Lferr_2541 Camphor resistance CrcB protein K06199 crcB; fluoride exporter D Lferr_0160 MerC mercury resistance protein K19058 merC; mercuric ion transport protein D Lferr_0163 MerC mercury resistance protein K19058 merC; mercuric ion transport protein D Lferr_2106 MerC mercury resistance protein K19058 merC; mercuric ion transport protein D Lferr_2545 protein of unknown function DUF1211 K24915 TMEM175; TMEM175 potassium channel family protein D Lferr_1719 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Lferr_0689 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D Lferr_0482 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D Lferr_0548 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein D Lferr_2170 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein D Lferr_0008 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D Lferr_1210 TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein D Lferr_1937 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Lferr_1198 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Lferr_1935 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Lferr_1941 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Lferr_1945 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Lferr_2551 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Lferr_1207 TonB-dependent receptor plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Lferr_0908 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Lferr_1199 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Lferr_1702 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Lferr_2552 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Lferr_2832 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Lferr_2062 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D Lferr_1619 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D Lferr_1701 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D Lferr_0170 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D Lferr_0729 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Lferr_1827 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_1706 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_1759 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_2864 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_2314 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system D Lferr_0040 RND efflux system, outer membrane lipoprotein, NodT family K15550 mdtP; outer membrane protein, multidrug efflux system D Lferr_2589 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D Lferr_1898 Carbohydrate-selective porin OprB K07267 oprB; porin D Lferr_2150 Carbohydrate-selective porin OprB K07267 oprB; porin D Lferr_0154 Carbohydrate-selective porin OprB K07267 oprB; porin D Lferr_1168 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family D Lferr_1608 outer membrane assembly lipoprotein YfgL K17713 bamB; outer membrane protein assembly factor BamB D Lferr_0592 outer membrane assembly lipoprotein YfiO K05807 bamD; outer membrane protein assembly factor BamD D Lferr_0457 SmpA/OmlA domain protein K06186 bamE; outer membrane protein assembly factor BamE D Lferr_1626 surface antigen (D15) K07278 tamA; translocation and assembly module TamA D Lferr_1625 protein of unknown function DUF490 K09800 tamB; translocation and assembly module TamB D Lferr_2308 Haemagluttinin domain protein K21449 ata; trimeric autotransporter adhesin D Lferr_2635 lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D Lferr_2636 protein of unknown function DUF1239 K11719 lptC; lipopolysaccharide export system protein LptC D Lferr_2643 Organic solvent tolerance protein K04744 lptD; LPS-assembly protein D Lferr_0618 Rare lipoprotein B-like protein K03643 lptE; LPS-assembly lipoprotein D Lferr_0751 CBS domain containing protein K06189 corC; hemolysin (HlyC) family protein D Lferr_1383 microcompartments protein K04027 eutM; ethanolamine utilization protein EutM D Lferr_2050 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D Lferr_1147 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D Lferr_0172 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein D Lferr_2060 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein D Lferr_1617 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein D Lferr_1553 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Lferr_0111 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Lferr_2428 small multidrug resistance protein K03297 emrE; small multidrug resistance pump D Lferr_0739 sodium/calcium exchanger membrane region K07301 yrbG; cation:H+ antiporter D Lferr_1861 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D Lferr_1895 sodium/hydrogen exchanger K03316 nhaP; Na+:H+ antiporter D Lferr_2078 Na+/H+ antiporter K03316 nhaP; Na+:H+ antiporter D Lferr_1636 sodium/hydrogen exchanger K03455 KEA1_2_3; K+:H+ antiporter D Lferr_0935 sodium/hydrogen exchanger K26731 CHX; K+:H+ antiporter D Lferr_2728 Chloride channel core K03281 clcA; chloride channel protein, CIC family D Lferr_0957 Chloride channel core K03281 clcA; chloride channel protein, CIC family D Lferr_0956 Chloride channel core K03281 clcA; chloride channel protein, CIC family D Lferr_2479 arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein D Lferr_0714 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Lferr_0332 protein of unknown function DUF125 transmembrane K22736 VIT; vacuolar iron transporter family protein D Lferr_0055 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein D Lferr_2609 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein D Lferr_0386 cell division protein FtsW K03588 ftsW; cell division protein FtsW D Lferr_1915 TonB family protein K03832 tonB; periplasmic protein TonB D Lferr_1922 TonB family protein K03832 tonB; periplasmic protein TonB D Lferr_1944 TonB family protein K03832 tonB; periplasmic protein TonB D Lferr_1947 TonB family protein K03832 tonB; periplasmic protein TonB D Lferr_0913 TonB family protein K03832 tonB; periplasmic protein TonB D Lferr_1202 TonB family protein K03832 tonB; periplasmic protein TonB D Lferr_1646 TonB family protein K03832 tonB; periplasmic protein TonB D Lferr_2612 hypothetical protein K03832 tonB; periplasmic protein TonB D Lferr_2313 hypothetical protein K03832 tonB; periplasmic protein TonB D Lferr_0072 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D Lferr_0067 protein TolA K03646 tolA; colicin import membrane protein D Lferr_0068 Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D Lferr_0986 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system D Lferr_0434 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system D Lferr_0039 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system D Lferr_2061 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D Lferr_1618 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D Lferr_0171 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D Lferr_2315 type I secretion membrane fusion protein, HlyD family K11003 hlyD; membrane fusion protein, hemolysin D D Lferr_1825 secretion protein HlyD family protein K13408 cvaA; membrane fusion protein D Lferr_2000 efflux transporter, RND family, MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D Lferr_1760 efflux transporter, RND family, MFP subunit K21135 mexM; membrane fusion protein, multidrug efflux system D Lferr_1554 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Lferr_0110 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Lferr_2863 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D Lferr_2151 FeoA family protein K04758 feoA; ferrous iron transport protein A D Lferr_2152 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D Lferr_0155 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D Lferr_2276 copper resistance protein CopC K07156 copC; copper resistance protein C C 02044 Secretion system [BR:afe02044] D Lferr_2316 type I secretion system ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D Lferr_2315 type I secretion membrane fusion protein, HlyD family K11003 hlyD; membrane fusion protein, hemolysin D D Lferr_0729 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Lferr_1827 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_1706 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_1759 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_2864 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_1825 secretion protein HlyD family protein K13408 cvaA; membrane fusion protein D Lferr_1826 ABC transporter related K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D Lferr_0324 AAA ATPase K02450 gspA; general secretion pathway protein A D Lferr_0671 AAA ATPase K02450 gspA; general secretion pathway protein A D Lferr_0365 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Lferr_0578 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA D Lferr_0362 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D Lferr_1087 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Lferr_1603 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D Lferr_0886 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN D Lferr_0885 Pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D Lferr_0884 Pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D Lferr_0883 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D Lferr_0441 twitching motility protein K02669 pilT; twitching motility protein PilT D Lferr_0442 twitching motility protein K02670 pilU; twitching motility protein PilU D Lferr_1084 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D Lferr_1082 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1 D Lferr_1590 type IV pilus assembly PilZ K02676 pilZ; type IV pilus assembly protein PilZ D Lferr_1086 Tfp pilus assembly protein FimT-like protein K08084 fimT; type IV fimbrial biogenesis protein FimT D Lferr_1730 Tfp pilus assembly protein FimV-like protein K08086 fimV; pilus assembly protein FimV D Lferr_2329 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D Lferr_2327 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D Lferr_2326 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC D Lferr_2325 response regulator receiver domain protein (CheY-like) K02282 cpaE; pilus assembly protein CpaE D Lferr_2324 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Lferr_2323 type II secretion system protein K12510 tadB; tight adherence protein B D Lferr_2322 type II secretion system protein K12511 tadC; tight adherence protein C D Lferr_2321 Tetratricopeptide TPR_2 repeat protein K27079 tadD; tight adherence protein D D Lferr_2319 membrane protein K27080 tadG; tight adherence protein G D Lferr_2332 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA D Lferr_0438 protein of unknown function YGGT K02221 yggT; YggT family protein D Lferr_2698 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA D Lferr_2899 putative comEA-related protein K02237 comEA; competence protein ComEA D Lferr_0644 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC D Lferr_0261 Lytic transglycosylase catalytic K03194 virB1; type IV secretion system protein VirB1 D Lferr_1397 Lytic transglycosylase catalytic K03194 virB1; type IV secretion system protein VirB1 D Lferr_1398 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D Lferr_0262 TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D Lferr_1334 P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D Lferr_0244 P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D Lferr_0245 Conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC D Lferr_0246 hypothetical protein K20529 trbD; type IV secretion system protein TrbD D Lferr_1338 hypothetical protein K20529 trbD; type IV secretion system protein TrbD D Lferr_1339 CagE TrbE VirB component of type IV transporter system K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D Lferr_0247 CagE TrbE VirB component of type IV transporter system K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D Lferr_1392 conjugal transfer protein K20531 trbF; type IV secretion system protein TrbF D Lferr_0256 conjugal transfer protein K20531 trbF; type IV secretion system protein TrbF D Lferr_1393 Conjugal transfer protein TrbG/VirB9/CagX K20532 trbG; type IV secretion system protein TrbG D Lferr_1394 hypothetical protein K20532 trbG; type IV secretion system protein TrbG D Lferr_0258 hypothetical protein K20532 trbG; type IV secretion system protein TrbG D Lferr_0257 Conjugal transfer protein TrbG/VirB9/CagX K20532 trbG; type IV secretion system protein TrbG D Lferr_0259 conjugation TrbI family protein K20533 trbI; type IV secretion system protein TrbI D Lferr_1395 conjugation TrbI family protein K20533 trbI; type IV secretion system protein TrbI D Lferr_0249 P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D Lferr_1341 P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D Lferr_1343 P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D Lferr_0251 P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D Lferr_0007 chaperone protein EcpD K07346 fimC; fimbrial chaperone protein D Lferr_0008 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D Lferr_0006 Spore coat U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D Lferr_0009 Spore coat U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D Lferr_0401 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Lferr_1786 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D Lferr_1715 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Lferr_0484 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Lferr_1714 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Lferr_2258 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Lferr_0517 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Lferr_2477 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Lferr_2373 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Lferr_1716 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Lferr_0033 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Lferr_2729 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Lferr_2657 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Lferr_2658 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB D Lferr_2659 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:afe02042] D Lferr_1719 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Lferr_1993 channel protein, hemolysin III family K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:afe02022] D Lferr_1152 integral membrane sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Lferr_1918 putative two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Lferr_1949 putative two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Lferr_2550 putative two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Lferr_1151 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Lferr_0107 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Lferr_1957 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Lferr_2873 integral membrane sensor signal transduction histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Lferr_2872 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D Lferr_0108 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D Lferr_1958 two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D Lferr_1884 osmosensitive K+ channel signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Lferr_1883 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Lferr_1695 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Lferr_1696 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Lferr_2520 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Lferr_2519 nitrogen metabolism transcriptional regulator, NtrC, Fis Family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D Lferr_0024 integral membrane sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D Lferr_0025 two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D Lferr_0028 integral membrane sensor signal transduction histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D Lferr_0029 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC D Lferr_0363 signal transduction histidine kinase, nitrogen specific, NtrB K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D Lferr_0364 two component, sigma54 specific, transcriptional regulator, Fis family K02667 pilR; two-component system, NtrC family, response regulator PilR D Lferr_0610 integral membrane sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D Lferr_2570 integral membrane sensor signal transduction histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D Lferr_2568 two component, sigma54 specific, transcriptional regulator, Fis family K07715 glrR; two-component system, NtrC family, response regulator GlrR D Lferr_0608 two component, sigma54 specific, transcriptional regulator, Fis family K07715 glrR; two-component system, NtrC family, response regulator GlrR D Lferr_0848 two component, sigma54 specific, transcriptional regulator, Fis family K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA D Lferr_2735 integral membrane sensor signal transduction histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D Lferr_2736 two component transcriptional regulator, Fis family K15012 regA; two-component system, response regulator RegA C 02035 Bacterial motility proteins [BR:afe02035] D Lferr_0364 two component, sigma54 specific, transcriptional regulator, Fis family K02667 pilR; two-component system, NtrC family, response regulator PilR D Lferr_0363 signal transduction histidine kinase, nitrogen specific, NtrB K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D Lferr_0441 twitching motility protein K02669 pilT; twitching motility protein PilT D Lferr_0442 twitching motility protein K02670 pilU; twitching motility protein PilU D Lferr_0578 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA D Lferr_0362 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D Lferr_1087 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Lferr_0365 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Lferr_1603 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D Lferr_0883 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D Lferr_0884 Pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D Lferr_0885 Pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D Lferr_0886 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN D Lferr_1590 type IV pilus assembly PilZ K02676 pilZ; type IV pilus assembly protein PilZ D Lferr_1084 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D Lferr_1082 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1 D Lferr_2332 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA D Lferr_2329 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D Lferr_2327 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D Lferr_2326 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC D Lferr_2325 response regulator receiver domain protein (CheY-like) K02282 cpaE; pilus assembly protein CpaE D Lferr_2324 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Lferr_0007 chaperone protein EcpD K07346 fimC; fimbrial chaperone protein D Lferr_0008 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D Lferr_0006 Spore coat U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D Lferr_0009 Spore coat U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:afe04812] D Lferr_0726 protein of unknown function DUF52 K06990 MEMO1; MEMO1 family protein D Lferr_2192 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Lferr_0379 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Lferr_0380 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Lferr_0014 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Lferr_0013 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Lferr_0012 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Lferr_0010 Septum formation topological specificity factor MinE K03608 minE; cell division topological specificity factor D Lferr_0273 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Lferr_1378 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Lferr_2816 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Lferr_1550 putative partition-related protein K03496 parA; chromosome partitioning protein D Lferr_1411 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Lferr_2815 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Lferr_1410 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Lferr_0272 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:afe04147] D Lferr_2755 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG D Lferr_0975 Phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Lferr_2852 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Lferr_2851 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Lferr_0897 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Lferr_2850 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Lferr_1478 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Lferr_1099 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D Lferr_0698 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Lferr_2291 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Lferr_2539 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Lferr_1453 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Lferr_0483 translation elongation factor Tu K02358 tuf; elongation factor Tu D Lferr_0495 translation elongation factor Tu K02358 tuf; elongation factor Tu D Lferr_2900 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Lferr_0397 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Lferr_0691 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Lferr_0518 Nucleoside-triphosphate--adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Lferr_0697 phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Lferr_2875 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Lferr_0568 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Lferr_0368 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Lferr_2458 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Lferr_0626 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Lferr_2896 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Lferr_1537 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Lferr_1018 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Lferr_1907 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Lferr_1074 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_1567 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_2674 catalytic domain of components of various dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Lferr_1195 Electron transfer flavoprotein alpha/beta-subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Lferr_1690 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Lferr_2259 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:afe02048] D Lferr_0832 EcoEI R domain protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Lferr_0969 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Lferr_0226 type III restriction protein res subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Lferr_2413 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Lferr_2012 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Lferr_0967 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Lferr_2009 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Lferr_0227 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Lferr_2415 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Lferr_0835 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Lferr_0833 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Lferr_2003 type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Lferr_0964 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Lferr_0228 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Lferr_2418 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Lferr_0139 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Lferr_1279 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Lferr_2793 DNA methylase N-4/N-6 domain protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D Lferr_2792 type III restriction protein res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5] D Lferr_1428 restriction endonuclease-like protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D Lferr_2785 restriction endonuclease K07448 mrr; restriction system protein D Lferr_2388 restriction endonuclease K07448 mrr; restriction system protein D Lferr_2505 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Lferr_2506 transcriptional regulator/antitoxin, MazE K07172 mazE; antitoxin MazE D Lferr_2509 transcriptional regulator/antitoxin, MazE K07172 mazE; antitoxin MazE D Lferr_1132 conserved hypothetical protein K19155 yhaV; toxin YhaV [EC:3.1.-.-] D Lferr_1133 putative regulator PrlF K19156 prlF; antitoxin PrlF D Lferr_1012 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE D Lferr_1011 protein of unknown function DUF172 K18923 stbD; antitoxin StbD D Lferr_1299 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J D Lferr_0995 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-] D Lferr_0575 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-] D Lferr_0994 prevent-host-death family protein K19159 yefM; antitoxin YefM D Lferr_1423 protein of unknown function UPF0150 K18843 hicB; antitoxin HicB D Lferr_1400 conserved hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4 D Lferr_0264 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4 D Lferr_0090 plasmid maintenance system killer K07334 higB-1; toxin HigB-1 D Lferr_0091 putative plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1 D Lferr_2391 PIN (PilT N terminus) domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D Lferr_1788 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D Lferr_0638 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D Lferr_2281 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D Lferr_0637 SpoVT/AbrB domain protein K18829 mvpT; antitoxin VapB D Lferr_2392 virulence-associated protein VapB-like protein K18829 mvpT; antitoxin VapB D Lferr_1789 virulence-associated protein, putative K18829 mvpT; antitoxin VapB D Lferr_1456 PilT protein domain protein K07062 fitB; toxin FitB [EC:3.1.-.-] D Lferr_1455 plasmid stability protein-like protein K21495 fitA; antitoxin FitA D Lferr_0379 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Lferr_2192 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Lferr_1693 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Lferr_1694 DNA topoisomerase (ATP-hydrolyzing) K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Lferr_0584 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Lferr_0822 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Lferr_1225 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Lferr_0188 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Lferr_1253 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:afe04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:afe04090] C 01504 Antimicrobial resistance genes [BR:afe01504] D Lferr_0622 peptidase M15D vanX D-ala-D-ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D Lferr_1554 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Lferr_0110 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Lferr_1553 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Lferr_0111 acriflavin resistance protein K18138 acrB; multidrug efflux pump D Lferr_2314 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system D Lferr_2000 efflux transporter, RND family, MFP subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D Lferr_0543 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D Lferr_0729 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Lferr_1827 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_1706 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_1759 outer membrane efflux protein K12340 tolC; outer membrane protein D Lferr_2864 outer membrane efflux protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:afe03100] D Lferr_R0022 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Lferr_R0011 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Lferr_R0050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Lferr_R0038 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Lferr_R0016 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Lferr_R0014 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Lferr_R0044 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Lferr_R0030 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Lferr_R0025 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Lferr_R0021 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Lferr_R0018 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Lferr_R0045 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Lferr_R0046 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Lferr_R0039 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Lferr_R0032 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Lferr_R0005 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Lferr_R0017 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Lferr_R0040 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Lferr_R0047 tRNA-His K14226 tRNA-His; tRNA His D Lferr_R0010 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Lferr_R0051 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Lferr_R0035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Lferr_R0028 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Lferr_R0026 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Lferr_R0034 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Lferr_R0043 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Lferr_R0029 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Lferr_R0001 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Lferr_R0037 tRNA-Met K14230 tRNA-Met; tRNA Met D Lferr_R0053 tRNA-Met K14230 tRNA-Met; tRNA Met D Lferr_R0008 tRNA-Met K14230 tRNA-Met; tRNA Met D Lferr_R0002 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Lferr_R0036 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Lferr_R0041 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Lferr_R0048 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Lferr_R0015 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Lferr_R0031 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Lferr_R0027 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Lferr_R0006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Lferr_R0019 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Lferr_R0013 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Lferr_R0007 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Lferr_R0004 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Lferr_R0020 tRNA-Val K14237 tRNA-Val; tRNA Val D Lferr_R0042 tRNA-Val K14237 tRNA-Val; tRNA Val D Lferr_R0024 tRNA-Val K14237 tRNA-Val; tRNA Val D Lferr_R0009 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Lferr_R0052 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Lferr_R0012 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Lferr_R0049 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Lferr_R0054 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Lferr_R0055 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Lferr_R0056 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA D Lferr_R0003 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA D Lferr_R0023 ssrA; tmRNA as predicted by Rfam (RF00023), score 195.69 K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Lferr_1781 hopanoid-associated sugar epimerase K00091 E1.1.1.219; dihydroflavonol-4-reductase [EC:1.1.1.219] D Lferr_1067 Aldehyde Dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D Lferr_0919 (2Fe-2S)-binding domain protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D Lferr_1194 Electron-transferring-flavoprotein dehydrogenase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D Lferr_2754 Cytochrome c-like protein K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2] D Lferr_2559 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D Lferr_2558 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D Lferr_1184 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Lferr_2828 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Lferr_0162 Heavy metal transport/detoxification protein K00520 merA; mercuric reductase [EC:1.16.1.1] D Lferr_2107 mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1] D Lferr_0161 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00520 merA; mercuric reductase [EC:1.16.1.1] D Lferr_2751 cytochrome c K20150 cyc2; iron:rusticyanin reductase [EC:1.16.9.1] D Lferr_2481 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Lferr_0728 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Lferr_2342 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Lferr_1807 NADH dehydrogenase (quinone) K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D Lferr_1809 hydrogenase 4 membrane component K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-] D Lferr_1810 NADH dehydrogenase (quinone) K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-] D Lferr_1795 Protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D Lferr_0629 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D Lferr_2544 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D Lferr_2820 Methyltransferase type 12 K16868 tehB; tellurite methyltransferase [EC:2.1.1.265] D Lferr_0752 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D Lferr_0875 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270] D Lferr_0424 leucyl/phenylalanyl-tRNA/protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D Lferr_0425 Arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D Lferr_1242 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase K05951 draT; NAD+---dinitrogen-reductase ADP-D-ribosyltransferase [EC:2.4.2.37] D Lferr_1260 modD protein K03813 modD; molybdenum transport protein [EC:2.4.2.-] D Lferr_1844 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Lferr_1174 DegT/DnrJ/EryC1/StrS aminotransferase K20084 gnnB; UDP-N-acetyl-3-dehydro-alpha-D-glucosamine 3-aminotranferase [EC:2.6.1.122] D Lferr_0704 (Glutamate--ammonia-ligase) adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D Lferr_0293 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Lferr_0677 protein of unknown function UPF0061 K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D Lferr_2043 PEP-utilising protein mobile region K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6] D Lferr_2630 HPr kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D Lferr_0064 tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Lferr_1101 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Lferr_1955 phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D Lferr_1106 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Lferr_2017 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Lferr_1243 ADP-ribosyl-(dinitrogen reductase) hydrolase K05521 draG; ADP-ribosyl-[dinitrogen reductase] hydrolase [EC:3.2.2.24] D Lferr_0600 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Lferr_0020 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Lferr_0706 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D Lferr_1549 adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25] D Lferr_1557 maf protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D Lferr_1595 carbohydrate kinase, YjeF related protein K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136] D Lferr_0795 UDP-N-acetylmuramate K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D Lferr_2066 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D Lferr_2404 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D Lferr_0167 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D Lferr_2556 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Lferr_0209 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D Lferr_1965 magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] C 99981 Carbohydrate metabolism D Lferr_1045 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A D Lferr_2162 histone deacetylase superfamily K04768 acuC; acetoin utilization protein AcuC C 99982 Energy metabolism D Lferr_0839 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein D Lferr_1352 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein D Lferr_0827 ferredoxin, 2Fe-2S type, ISC system K04755 fdx; ferredoxin, 2Fe-2S D Lferr_1257 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D Lferr_0015 4Fe-4S ferredoxin iron-sulfur binding domain protein K05524 fdxA; ferredoxin D Lferr_1098 4Fe-4S ferredoxin iron-sulfur binding domain protein K05524 fdxA; ferredoxin D Lferr_1523 Protein of unknown function DUF1971 K05524 fdxA; ferredoxin D Lferr_1237 ferredoxin K11107 yfaE; ferredoxin D Lferr_0823 FeS cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D Lferr_1226 Fe-S cluster assembly protein NifU K13819 K13819; NifU-like protein D Lferr_1229 NifQ family protein K15790 nifQ; nitrogen fixation protein NifQ D Lferr_1816 von Willebrand factor type A K02448 norD; nitric oxide reductase NorD protein D Lferr_1375 von Willebrand factor type A K02448 norD; nitric oxide reductase NorD protein D Lferr_2163 von Willebrand factor type A K02448 norD; nitric oxide reductase NorD protein D Lferr_2663 von Willebrand factor type A K02448 norD; nitric oxide reductase NorD protein D Lferr_1815 CbbQ/NirQ/NorQ domain protein K04748 norQ; nitric oxide reductase NorQ protein D Lferr_2164 ATPase associated with various cellular activities AAA_5 K04748 norQ; nitric oxide reductase NorQ protein D Lferr_1376 CbbQ/NirQ/NorQ domain protein K04748 norQ; nitric oxide reductase NorQ protein D Lferr_2662 CbbQ/NirQ/NorQ domain protein K04748 norQ; nitric oxide reductase NorQ protein D Lferr_1233 nitrogen fixation protein NifX K02596 nifX; nitrogen fixation protein NifX D Lferr_1254 nitrogen fixation protein FixT K02593 nifT; nitrogen fixation protein NifT D Lferr_1251 NifZ family protein K02597 nifZ; nitrogen fixation protein NifZ D Lferr_1252 NifZ family protein K02597 nifZ; nitrogen fixation protein NifZ D Lferr_1245 nitrogenase cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB D Lferr_1234 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN K02592 nifN; nitrogenase molybdenum-iron protein NifN D Lferr_1235 nitrogenase MoFe cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE D Lferr_1196 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit D Lferr_1193 putative ferredoxin like protein; FixX K03855 fixX; ferredoxin like protein D Lferr_1222 nitrogen fixation protein NifW K02595 nifW; nitrogenase-stabilizing/protective protein D Lferr_2743 rusticyanin K18683 rus; rusticyanin C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Lferr_0440 alanine racemase domain protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D Lferr_0480 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A D Lferr_0731 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D Lferr_0481 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D Lferr_2020 protein of unknown function DUF526 K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D Lferr_2346 Putative lipid carrier protein-like protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT D Lferr_1734 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein D Lferr_0456 cyclase/dehydrase K18588 COQ10; coenzyme Q-binding protein COQ10 C 99988 Secondary metabolism D Lferr_2429 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D Lferr_0100 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K15977 K15977; putative oxidoreductase D Lferr_1073 phospholipase/Carboxylesterase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D Lferr_0742 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein D Lferr_1891 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2 D Lferr_2530 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2 C 99974 Translation D Lferr_2304 beta-lactamase domain protein K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D Lferr_0679 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D Lferr_1030 trigger factor K03545 tig; trigger factor D Lferr_0454 SsrA-binding protein K03664 smpB; SsrA-binding protein D Lferr_0861 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC D Lferr_2887 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC D Lferr_0863 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D Lferr_2888 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D Lferr_0864 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D Lferr_0860 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D Lferr_2021 magnesium chelatase ChlI subunit K07391 comM; magnesium chelatase family protein D Lferr_2521 20S proteasome, A and B subunits K07395 K07395; putative proteasome-type protease D Lferr_2842 OsmC family protein K07397 yhfA; putative redox protein D Lferr_2710 ResB family protein K07399 resB; cytochrome c biogenesis protein D Lferr_0923 protein of unknown function DUF182 K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D Lferr_0528 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Lferr_2859 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC D Lferr_1471 HhH-GPD family protein K07457 K07457; endonuclease III related protein D Lferr_0315 protein of unknown function UPF0102 K07460 yraN; putative endonuclease D Lferr_0018 DNA protecting protein DprA K04096 smf; DNA processing protein D Lferr_0549 AAA ATPase central domain protein K07478 ycaJ; putative ATPase D Lferr_2451 conserved hypothetical protein K07501 K07501; 3'-5' exonuclease D Lferr_2023 transposase IS3/IS911 family protein K07483 K07483; transposase D Lferr_1328 conserved hypothetical protein, possibly transposase K07483 K07483; transposase D Lferr_1427 transposase IS3/IS911 family protein K07483 K07483; transposase D Lferr_2093 transposase IS66 K07484 K07484; transposase D Lferr_1327 IS66 Orf2 family protein K07484 K07484; transposase D Lferr_0267 IS66 Orf2 family protein K07484 K07484; transposase D Lferr_1755 IS66 Orf2 family protein K07484 K07484; transposase D Lferr_2092 IS66 Orf2 family protein K07484 K07484; transposase D Lferr_1326 transposase IS66 K07484 K07484; transposase D Lferr_1756 transposase IS66 K07484 K07484; transposase D Lferr_0266 transposase IS66 K07484 K07484; transposase D Lferr_1569 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Lferr_1311 hypothetical protein K07486 K07486; transposase D Lferr_2781 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Lferr_1571 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Lferr_2032 integrase, catalytic region K07497 K07497; putative transposase D Lferr_2136 transposase K07497 K07497; putative transposase D Lferr_2133 conserved hypothetical protein K07497 K07497; putative transposase D Lferr_1426 Integrase catalytic region K07497 K07497; putative transposase D Lferr_0838 hypothetical protein K07497 K07497; putative transposase D Lferr_0329 integrase, catalytic region K07497 K07497; putative transposase D Lferr_0666 integrase, catalytic region K07497 K07497; putative transposase D Lferr_2501 hypothetical protein K07497 K07497; putative transposase D Lferr_0221 Tn7-like transposition protein B K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D Lferr_1682 phage shock protein A, PspA K03969 pspA; phage shock protein A D Lferr_1592 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Lferr_0867 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D Lferr_2862 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D Lferr_0914 permease for cytosine/purines uracil thiamine allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family C 99978 Cell growth D Lferr_0816 intracellular septation protein A K06190 ispZ; intracellular septation protein D Lferr_2528 SpoVR family protein K06415 spoVR; stage V sporulation protein R D Lferr_0683 Peptidase M23 K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D Lferr_2361 GTP-binding protein TypA K06207 typA; GTP-binding protein D Lferr_0749 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D Lferr_1185 PhoH family protein K07175 phoH2; PhoH-like ATPase D Lferr_2525 putative serine protein kinase, PrkA K07180 prkA; serine protein kinase D Lferr_1091 protein of unknown function DUF520 K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D Lferr_0547 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein D Lferr_2383 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D Lferr_1772 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D Lferr_1169 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein D Lferr_2620 Capsule polysaccharide biosynthesis protein K07265 kpsS; capsular polysaccharide export protein D Lferr_2619 Capsule polysaccharide biosynthesis protein K07266 kpsC; capsular polysaccharide export protein D Lferr_1713 Putative salt-induced outer membrane protein-like protein K07283 ydiY; putative salt-induced outer membrane protein D Lferr_1956 outer membrane lipoprotein Slp K07285 slp; outer membrane lipoprotein D Lferr_0102 secretion protein HlyD family protein K02005 ABC.CD.TX; HlyD family secretion protein D Lferr_2677 hypothetical protein K04062 osmB; osmotically inducible lipoprotein OsmB D Lferr_1604 transcriptional regulator, XRE family K15539 rodZ; cytoskeleton protein RodZ D Lferr_1475 conserved hypothetical protein K21908 hdeD; membrane protein HdeD C 99994 Others D Lferr_1157 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Lferr_1075 periplasmic glucan biosynthesis protein MdoG K03670 mdoG; periplasmic glucans biosynthesis protein D Lferr_1929 phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein D Lferr_2359 ApaG domain protein K06195 apaG; ApaG protein D Lferr_1852 iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY B B 09194 Poorly characterized C 99996 General function prediction only D Lferr_1723 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production D Lferr_1263 globin K06886 glbN; hemoglobin D Lferr_0869 globin K06886 glbN; hemoglobin D Lferr_1197 globin K06886 glbN; hemoglobin D Lferr_0830 Patatin K07001 K07001; NTE family protein D Lferr_1882 Haloacid dehalogenase domain protein hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D Lferr_2673 iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein D Lferr_1577 ribonuclease BN K07058 K07058; membrane protein D Lferr_2702 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase D Lferr_1042 protein of unknown function DUF489 K07153 hflD; high frequency lysogenization protein D Lferr_2478 arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH D Lferr_0017 protein of unknown function DUF494 K03747 smg; Smg protein D Lferr_2156 SNARE associated Golgi protein K03975 dedA; membrane-associated protein D Lferr_2065 conserved hypothetical protein K08982 K08982; putative membrane protein D Lferr_0192 conserved hypothetical protein K08982 K08982; putative membrane protein D Lferr_0211 conserved hypothetical protein K08982 K08982; putative membrane protein D Lferr_0168 conserved hypothetical protein K08982 K08982; putative membrane protein D Lferr_0219 hypothetical protein K08982 K08982; putative membrane protein D Lferr_1818 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA C 99997 Function unknown D Lferr_2402 hypothetical protein K06889 K06889; uncharacterized protein D Lferr_0817 protein of unknown function DUF815 K06923 K06923; uncharacterized protein D Lferr_2206 small GTP-binding protein K06945 K06945; uncharacterized protein D Lferr_1518 Glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein D Lferr_1777 hopanoid biosynthesis associated RND transporter like protein HpnN K07003 K07003; uncharacterized protein D Lferr_0214 pyridoxamine 5'-phosphate oxidase-related FMN-binding K07006 K07006; uncharacterized protein D Lferr_2838 conserved hypothetical protein K07018 K07018; uncharacterized protein D Lferr_0872 alpha/beta hydrolase fold K07019 K07019; uncharacterized protein D Lferr_2867 nucleic acid-binding protein, contains PIN domain K07063 K07063; uncharacterized protein D Lferr_0088 conserved hypothetical protein K07064 K07064; uncharacterized protein D Lferr_2597 hypothetical protein K07064 K07064; uncharacterized protein D Lferr_1616 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Lferr_1905 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Lferr_2398 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Lferr_1986 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Lferr_0909 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Lferr_2176 conserved hypothetical protein K07092 K07092; uncharacterized protein D Lferr_2139 conserved hypothetical protein K07092 K07092; uncharacterized protein D Lferr_0533 conserved hypothetical protein K07092 K07092; uncharacterized protein D Lferr_0054 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein D Lferr_0316 Putative lipoprotein-like protein K07121 K07121; uncharacterized protein D Lferr_2143 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein D Lferr_0117 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein D Lferr_2310 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein D Lferr_0479 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein D Lferr_0573 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein D Lferr_2208 Roadblock/LC7 family protein K07131 K07131; uncharacterized protein D Lferr_0565 Roadblock/LC7 family protein K07131 K07131; uncharacterized protein D Lferr_1092 Roadblock/LC7 family protein K07131 K07131; uncharacterized protein D Lferr_1979 peptidase S16 lon domain protein K07157 K07157; uncharacterized protein D Lferr_0034 protein of unknown function DUF37 K08998 K08998; uncharacterized protein D Lferr_2369 Domain of unknown function DUF1791 K09004 K09004; uncharacterized protein D Lferr_2492 protein of unknown function DUF192 K09005 K09005; uncharacterized protein D Lferr_1973 conserved hypothetical protein K09117 K09117; uncharacterized protein D Lferr_0253 protein of unknown function DUF167 K09131 K09131; uncharacterized protein D Lferr_0437 protein of unknown function DUF167 K09131 K09131; uncharacterized protein D Lferr_2542 protein of unknown function DUF190 K09137 K09137; uncharacterized protein D Lferr_0727 AMMECR1 domain protein K09141 K09141; uncharacterized protein D Lferr_2198 protein of unknown function DUF493 K09158 K09158; uncharacterized protein D Lferr_1981 conserved hypothetical protein K09700 K09700; uncharacterized protein D Lferr_2865 protein of unknown function DUF188 K09768 K09768; uncharacterized protein D Lferr_0815 YCII-related K09780 K09780; uncharacterized protein D Lferr_2527 protein of unknown function DUF444 K09786 K09786; uncharacterized protein D Lferr_0650 protein of unknown function DUF343 K09791 K09791; uncharacterized protein D Lferr_1438 conserved hypothetical protein K09794 K09794; uncharacterized protein D Lferr_2045 protein of unknown function DUF497 K09803 K09803; uncharacterized protein D Lferr_1315 protein of unknown function DUF497 K09803 K09803; uncharacterized protein D Lferr_1358 conserved hypothetical protein K09822 K09822; uncharacterized protein D Lferr_2365 protein of unknown function DUF484 K09921 K09921; uncharacterized protein D Lferr_0643 conserved hypothetical protein K09928 K09928; uncharacterized protein D Lferr_2511 conserved hypothetical protein K09940 K09940; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 22, 2024