+F Repair protein KO
#
DNA Repair and Recombination Proteins - Arachis ipaensis
%
!
AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 107638750 DNA oxidative demethylase ALKBH2 K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 107622398 DExH-box ATP-dependent RNA helicase DExH14 K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
C BER (base exicision repair)
D DNA glycosylases
E 107639618 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 107628732 uracil-DNA glycosylase, mitochondrial isoform X1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 107645400 DNA-3-methyladenine glycosylase isoform X1 K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 107622783 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 107639420 uncharacterized protein LOC107639420 isoform X2 K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 107613828 N-glycosylase/DNA lyase OGG1 K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E 107628993 endonuclease III homolog 1, chloroplastic K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 107613570 endonuclease III homolog 2, chloroplastic-like isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 107632626 putative DNA glycosylase At3g47830 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 107624490 DNA-(apurinic or apyrimidinic site) lyase 2 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 107613572 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 107645411 DNA polymerase delta small subunit isoform X1 K02328 POLD2; DNA polymerase delta subunit 2
F 107614100 DNA polymerase delta subunit 3 isoform X1 K03504 POLD3; DNA polymerase delta subunit 3
F 107631568 DNA polymerase delta subunit 4 isoform X1 K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 107629315 DNA polymerase epsilon catalytic subunit A isoform X1 K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 107644073 DNA polymerase epsilon subunit B K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 107629334 DNA polymerase epsilon subunit 3 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E 107610722 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 107645459 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 107618415 flap endonuclease 1 isoform X2 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 107629273 DNA ligase 1 isoform X1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E 107639224 DNA-repair protein XRCC1 K10803 XRCC1; DNA-repair protein XRCC1
D Other BER factors
E 107643281 tyrosyl-DNA phosphodiesterase 1 isoform X1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 107625784 transcription factor bHLH140 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 107630058 polynucleotide 3'-phosphatase ZDP K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 107648499 polynucleotide 3'-phosphatase ZDP-like isoform X1 K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 107643500 LOW QUALITY PROTEIN: DNA polymerase lambda K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 107645257 poly [ADP-ribose] polymerase 1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 107626174 poly [ADP-ribose] polymerase 2 isoform X1 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 107629330 poly [ADP-ribose] polymerase 3 isoform X1 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 107608737 DNA repair protein RAD4 isoform X2 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 107635736 ubiquitin receptor RAD23d K10839 RAD23; UV excision repair protein RAD23
F 107618152 ubiquitin receptor RAD23c isoform X1 K10839 RAD23; UV excision repair protein RAD23
F 107638373 ubiquitin receptor RAD23b isoform X1 K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F 107613945 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 107629957 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 107624456 uncharacterized protein LOC107624456 isoform X1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 107622574 cullin-4 K10609 CUL4; cullin 4
F 107632056 cullin-4 K10609 CUL4; cullin 4
F 107630562 DNA damage-binding protein 1a isoform X1 K10610 DDB1; DNA damage-binding protein 1
F 107609534 protein DAMAGED DNA-BINDING 2 K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
F 107643625 EIN3-binding F-box protein 2 K15082 RAD7; DNA repair protein RAD7
F 107630470 uncharacterized protein LOC107630470 K15082 RAD7; DNA repair protein RAD7
F 107629976 DNA repair protein RAD16 isoform X2 K15083 RAD16; DNA repair protein RAD16
F 107614449 DNA repair protein RAD16-like isoform X1 K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 107642539 DNA-directed RNA polymerase II subunit 1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 107629713 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit 1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 107619435 DNA-directed RNA polymerase II subunit 1-like isoform X1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 107622567 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 107639270 DNA-directed RNA polymerases II, IV and V subunit 3 isoform X1 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 107619075 DNA-directed RNA polymerase II subunit 4 isoform X2 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 107638736 DNA-directed RNA polymerases IV and V subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 107645545 DNA-directed RNA polymerase V subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 107622061 DNA-directed RNA polymerases IV and V subunit 5B K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 107608752 DNA-directed RNA polymerases II and IV subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 107647001 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 107608923 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 107625928 LOW QUALITY PROTEIN: DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 107632292 DNA-directed RNA polymerases II, IV and V subunit 6A-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 107633694 DNA-directed RNA polymerases II and V subunit 6B-like isoform X1 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 107608955 DNA-directed RNA polymerases II, IV and V subunit 6A K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 107631529 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 107628963 DNA-directed RNA polymerases II, IV and V subunit 8B K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 107630078 DNA-directed RNA polymerases II, IV and V subunit 8B K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 107614074 DNA-directed RNA polymerases II and V subunit 8A K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 107626200 DNA-directed RNA polymerases II, IV and V subunit 8B K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 107638996 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 107638997 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 107639155 DNA-directed RNA polymerases II, IV and V subunit 9A isoform X1 K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 107630151 DNA-directed RNA polymerase subunit 10-like protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 107641782 DNA-directed RNA polymerase subunit 10-like protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 107629693 DNA-directed RNA polymerases II, IV and V subunit 11 isoform X1 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 107630665 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
F 107630681 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
F 107646227 DNA-directed RNA polymerases II, IV and V subunit 12-like K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
F 107634529 DNA-directed RNA polymerases II, IV and V subunit 12-like K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
F 107643457 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F 107613945 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 107629957 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 107624456 uncharacterized protein LOC107624456 isoform X1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 107622574 cullin-4 K10609 CUL4; cullin 4
F 107632056 cullin-4 K10609 CUL4; cullin 4
F 107630562 DNA damage-binding protein 1a isoform X1 K10610 DDB1; DNA damage-binding protein 1
F 107606361 DNA excision repair protein ERCC-8 isoform X1 K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 107625025 protein CHROMATIN REMODELING 8 isoform X2 K10841 ERCC6; DNA excision repair protein ERCC-6
F 107645696 LOW QUALITY PROTEIN: UV-stimulated scaffold protein A homolog K23720 UVSSA; UV-stimulated scaffold protein A
F 107631185 transcription elongation factor 1 homolog isoform X4 K25829 ELOF1; transcription elongation factor 1
F 107631186 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 107621782 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 107629297 transcription elongation factor 1 homolog isoform X7 K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 107637977 DNA repair helicase XPB1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 107644931 DNA repair helicase XPD K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 107638232 LOW QUALITY PROTEIN: probable RNA polymerase II transcription factor B subunit 1-1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 107623549 general transcription factor IIH subunit 2 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 107606066 RNA polymerase II transcription factor B subunit 4 isoform X1 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 107631238 RNA polymerase II transcription factor B subunit 2 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 107644456 RNA polymerase II transcription factor B subunit 5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 107631767 cyclin-dependent kinase D-3 isoform X1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 107644231 cyclin-dependent kinase D-3 isoform X1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 107617337 cyclin-H1-1 K06634 CCNH; cyclin H
E 107643371 CDK-activating kinase assembly factor MAT1 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E 107643496 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 107642402 replication protein A 70 kDa DNA-binding subunit E K07466 RFA1; replication factor A1
E 107630489 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 107634573 replication protein A 70 kDa DNA-binding subunit B isoform X1 K07466 RFA1; replication factor A1
E 107605148 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E 107642430 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 107617824 replication protein A 14 kDa subunit B K10740 RPA3; replication factor A3
E 107604634 replication protein A 14 kDa subunit B K10740 RPA3; replication factor A3
D Other NER factors
E 107618066 DNA excision repair protein ERCC-1 isoform X5 K10849 ERCC1; DNA excision repair protein ERCC-1
E 107642605 DNA repair endonuclease UVH1 isoform X1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 107605317 DNA repair protein UVH3 K10846 ERCC5; DNA excision repair protein ERCC-5
E 107629273 DNA ligase 1 isoform X1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 107612610 MMS19 nucleotide excision repair protein homolog isoform X2 K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 107631881 cullin-3A K03869 CUL3; cullin 3
E 107622981 LOW QUALITY PROTEIN: cullin-3B-like K03869 CUL3; cullin 3
E 107609479 LOW QUALITY PROTEIN: elongin-C-like K03872 ELOC; elongin-C
E 107612609 elongin-C isoform X2 K03872 ELOC; elongin-C
E 107630615 uncharacterized protein LOC107630615 isoform X3 K03873 ELOB; elongin-B
E 107632897 LOW QUALITY PROTEIN: transcription elongation factor B polypeptide 3-like K15077 ELA1; elongin-A
E 107633282 uncharacterized protein LOC107633282 K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 107630408 DNA mismatch repair protein MSH2 K08735 MSH2; DNA mismatch repair protein MSH2
E 107618836 DNA mismatch repair protein MSH3 K08736 MSH3; DNA mismatch repair protein MSH3
E 107646082 DNA mismatch repair protein MSH6 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 107645074 DNA mismatch repair protein MLH1 isoform X3 K08734 MLH1; DNA mismatch repair protein MLH1
E 107626136 DNA mismatch repair protein PMS1 isoform X1 K10858 PMS2; DNA mismatch repair protein PMS2
E 107642502 DNA mismatch repair protein MLH3 isoform X1 K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E 107613572 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 107645411 DNA polymerase delta small subunit isoform X1 K02328 POLD2; DNA polymerase delta subunit 2
E 107614100 DNA polymerase delta subunit 3 isoform X1 K03504 POLD3; DNA polymerase delta subunit 3
E 107631568 DNA polymerase delta subunit 4 isoform X1 K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 107643496 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 107642402 replication protein A 70 kDa DNA-binding subunit E K07466 RFA1; replication factor A1
E 107630489 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 107634573 replication protein A 70 kDa DNA-binding subunit B isoform X1 K07466 RFA1; replication factor A1
E 107605148 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E 107642430 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 107617824 replication protein A 14 kDa subunit B K10740 RPA3; replication factor A3
E 107604634 replication protein A 14 kDa subunit B K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 107629993 replication factor C subunit 1 isoform X3 K10754 RFC1; replication factor C subunit 1
E 107606030 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 107631320 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 107640143 uncharacterized protein LOC107640143 K10756 RFC3_5; replication factor C subunit 3/5
E 107623337 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 107606051 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 110264216 replication factor C subunit 5-like K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 107610722 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 107645459 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 107642092 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 107634826 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 107629273 DNA ligase 1 isoform X1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 107640907 WD repeat-containing protein 76 K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 107612935 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 107638231 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 107609407 nijmegen breakage syndrome 1 protein K10867 NBN; nibrin
D BRCA1-core complex
E 107623632 protein BREAST CANCER SUSCEPTIBILITY 1 homolog K10683 BARD1; BRCA1-associated RING domain protein 1
E 107647828 BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E 107606322 uncharacterized protein LOC107606322 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 107638805 BRCA1-A complex subunit BRE K12173 BRE; BRCA1-A complex subunit BRE
E 107612674 lys-63-specific deubiquitinase BRCC36 K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E 107645348 Fanconi anemia group J protein K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 107638458 DNA topoisomerase 2-binding protein 1-A K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 107618753 BRCT domain-containing protein At4g02110 isoform X1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 107612935 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 107638231 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 107609407 nijmegen breakage syndrome 1 protein K10867 NBN; nibrin
D BRCA complex
E 107635814 protein BREAST CANCER SUSCEPTIBILITY 2 homolog A-like isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 107637506 DNA repair protein RAD51 homolog isoform X1 K04482 RAD51; DNA repair protein RAD51
E 107618127 DNA repair protein RAD51 homolog B K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 107637506 DNA repair protein RAD51 homolog isoform X1 K04482 RAD51; DNA repair protein RAD51
E 107618127 DNA repair protein RAD51 homolog B K04482 RAD51; DNA repair protein RAD51
E 107614492 DNA repair protein RAD51 homolog 2 isoform X2 K10869 RAD51L1; RAD51-like protein 1
E 107622494 DNA repair protein RAD51 homolog 3 K10870 RAD51L2; RAD51-like protein 2
E 107632350 DNA repair protein RAD51 homolog 4-like K10871 RAD51L3; RAD51-like protein 3
E 107632351 DNA repair protein RAD51 homolog 4-like K10871 RAD51L3; RAD51-like protein 3
E 107632231 DNA repair protein XRCC2 homolog isoform X2 K10879 XRCC2; DNA-repair protein XRCC2
E 107641404 LOW QUALITY PROTEIN: DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
E 107634206 DNA repair RAD52-like protein 1, mitochondrial K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E 107623795 DNA repair RAD52-like protein 2, chloroplastic K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
D Rad54 family proteins
E 107647611 SNF2 domain-containing protein CLASSY 4-like isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 107643309 protein CHROMATIN REMODELING 25 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 107620352 SNF2 domain-containing protein CLASSY 1-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 107613102 protein CHROMATIN REMODELING 35 isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 107640013 SNF2 domain-containing protein CLASSY 3-like isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 107608887 SNF2 domain-containing protein CLASSY 1 isoform X2 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E 107642424 mediator of RNA polymerase II transcription subunit 34 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 107619384 ATP-dependent DNA helicase Q-like SIM K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 107630447 ATP-dependent DNA helicase Q-like 3 isoform X2 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 107638475 ATP-dependent DNA helicase Q-like 4A isoform X2 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 107632010 LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like 5 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 107630447 ATP-dependent DNA helicase Q-like 3 isoform X2 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 107638475 ATP-dependent DNA helicase Q-like 4A isoform X2 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 107612928 DNA topoisomerase 3-alpha K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 107638269 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 107633511 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 107634126 uncharacterized protein LOC107634126 isoform X1 K15365 RMI2; RecQ-mediated genome instability protein 2
D RPA (replication factor A)
E 107643496 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 107642402 replication protein A 70 kDa DNA-binding subunit E K07466 RFA1; replication factor A1
E 107630489 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 107634573 replication protein A 70 kDa DNA-binding subunit B isoform X1 K07466 RFA1; replication factor A1
E 107605148 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E 107642430 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 107617824 replication protein A 14 kDa subunit B K10740 RPA3; replication factor A3
E 107604634 replication protein A 14 kDa subunit B K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 107607988 serine/threonine-protein phosphatase PP-X isozyme 2 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 107629537 serine/threonine-protein phosphatase 4 regulatory subunit 2 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 107638999 serine/threonine-protein phosphatase 4 regulatory subunit 3A K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 107639129 serine/threonine-protein phosphatase 4 regulatory subunit 3 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
E 107625677 AP-5 complex subunit beta-1 K19022 AP5B1; AP-5 complex subunit beta-1
E 107637988 AP-5 complex subunit mu K19023 AP5M1; AP-5 complex subunit mu-1
E 107630157 AP-5 complex subunit zeta-1 K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E 107612788 structural maintenance of chromosomes protein 5 K22803 SMC5; structural maintenance of chromosomes protein 5
E 107629715 structural maintenance of chromosomes protein 6B isoform X2 K22804 SMC6; structural maintenance of chromosomes protein 6
E 107625133 non-structural maintenance of chromosomes element 1 homolog K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 107610792 E3 SUMO-protein ligase MMS21 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 107618476 non-structural maintenance of chromosomes element 4 homolog A K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 107646258 LOW QUALITY PROTEIN: non-structural maintenance of chromosomes element 4 homolog B-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 107621051 non-structural maintenance of chromosomes element 4 homolog B-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E 107630948 crossover junction endonuclease EME1B K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 107609705 crossover junction endonuclease MUS81 isoform X1 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 107618792 protein DSS1 HOMOLOG ON CHROMOSOME V K10881 SHFM1; 26 proteasome complex subunit DSS1
E 107642765 uncharacterized protein LOC107642765 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 107629665 structure-specific endonuclease subunit slx1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 107624309 structure-specific endonuclease subunit slx1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 107644823 flap endonuclease GEN-like 2 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 107634953 flap endonuclease GEN-like 1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 107631144 uncharacterized protein LOC107631144 isoform X2 K19026 SPG11; spatacsin
E 107612622 uncharacterized protein LOC107612622 isoform X2 K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 107627237 protein MRG1 isoform X1 K11339 MORF4L1; mortality factor 4-like protein 1
E 107606389 protein MRG2 K11339 MORF4L1; mortality factor 4-like protein 1
E 107631310 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 107644027 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 107605022 fidgetin-like protein 1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 107617912 zinc finger SWIM domain-containing protein 7 K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 107637509 Werner Syndrome-like exonuclease K22807 WRNexo; werner syndrome-like exonuclease [EC:3.1.11.-]
E 107617691 uncharacterized protein LOC107617691 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 107619551 uncharacterized protein LOC107619551 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 107631899 single-stranded DNA-binding protein WHY1, chloroplastic isoform X1 K26559 WHY1; single-stranded DNA-binding protein WHY1
E 107645750 single-stranded DNA-bindig protein WHY2, mitochondrial isoform X1 K26561 WHY2; single-stranded DNA-binding protein WHY2
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 107618307 ATP-dependent DNA helicase 2 subunit KU70 isoform X2 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 107625970 ATP-dependent DNA helicase 2 subunit KU80 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
E 107625971 ATP-dependent DNA helicase 2 subunit KU80 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E 107612935 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 107638231 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E 107636274 LOW QUALITY PROTEIN: DNA ligase 4-like K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 107619216 DNA repair protein XRCC4 isoform X1 K10886 XRCC4; DNA-repair protein XRCC4
D X-family DNA polymerases
E 107643500 LOW QUALITY PROTEIN: DNA polymerase lambda K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 107625784 transcription factor bHLH140 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 107636269 uncharacterized protein LOC107636269 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
C FA (Fanconi anemia) pathway
D FA core complex
E 107629773 ATP-dependent DNA helicase mph1 isoform X1 K10896 FANCM; fanconi anemia group M protein
D FA core complex binding factors
E 107612153 centromere protein S K11511 APITD1; centromere protein S
E 107612213 centromere protein S-like isoform X1 K11511 APITD1; centromere protein S
E 107630891 centromere protein X K15360 STRA13; centromere protein X
D Bloom's syndrome complex (BTR)
E 107630447 ATP-dependent DNA helicase Q-like 3 isoform X2 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 107638475 ATP-dependent DNA helicase Q-like 4A isoform X2 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 107612928 DNA topoisomerase 3-alpha K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 107638269 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 107633511 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 107634126 uncharacterized protein LOC107634126 isoform X1 K15365 RMI2; RecQ-mediated genome instability protein 2
D FANCD2-I complex
D Downstream FA components
E 107635814 protein BREAST CANCER SUSCEPTIBILITY 2 homolog A-like isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 107645348 Fanconi anemia group J protein K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 107635617 fanconi-associated nuclease 1 homolog K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 107637506 DNA repair protein RAD51 homolog isoform X1 K04482 RAD51; DNA repair protein RAD51
E 107618127 DNA repair protein RAD51 homolog B K04482 RAD51; DNA repair protein RAD51
E 107622494 DNA repair protein RAD51 homolog 3 K10870 RAD51L2; RAD51-like protein 2
E 107613380 telomere length regulation protein TEL2 homolog isoform X1 K11137 TELO2; telomere length regulation protein
E 107617892 WD repeat-containing protein 48 isoform X1 K15361 WDR48; WD repeat-containing protein 48
E 107646479 WD repeat-containing protein 48 K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 107622788 phytochrome-associated serine/threonine-protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 107612745 serine/threonine-protein phosphatase 6 regulatory subunit 3-B isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 107629226 serine/threonine-protein phosphatase 6 regulatory subunit 3 isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 107638835 serine/threonine-protein phosphatase 6 regulatory subunit 3 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
D Ubiquitin ligases
D Others
E 107626229 telomerase Cajal body protein 1 isoform X1 K23314 WRAP53; telomerase Cajal body protein 1
E 107647854 WD repeat-containing protein 70 K24752 WDR70; WD repeat-containing protein 70
E 107640907 WD repeat-containing protein 76 K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 107631473 DNA polymerase eta isoform X1 K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 107640350 DNA polymerase kappa K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D 107643304 DNA repair protein REV1 isoform X2 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D 107645895 DNA polymerase zeta catalytic subunit K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D 107633400 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 107631898 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 107613472 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 isoform X1 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 107625257 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 107623518 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 107621316 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 107626364 ubiquitin-conjugating enzyme E2 variant 1C K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 107631813 ubiquitin-conjugating enzyme E2 variant 1B K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 107630062 ubiquitin-conjugating enzyme E2 35 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 107613447 ubiquitin-conjugating enzyme E2 35 isoform X2 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 107610722 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
D 107645459 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D 107645916 cell cycle checkpoint control protein RAD9A K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 107624468 checkpoint protein hus1 isoform X1 K10903 HUS1; HUS1 checkpoint protein
D 107614297 uncharacterized protein LOC107614297 isoform X1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 107643740 cell cycle checkpoint protein RAD17 K06662 HRAD17; cell cycle checkpoint protein
D 107606030 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 107631320 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 107640143 uncharacterized protein LOC107640143 K10756 RFC3_5; replication factor C subunit 3/5
D 107623337 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 107606051 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 110264216 replication factor C subunit 5-like K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 107614297 uncharacterized protein LOC107614297 isoform X1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 107617476 uncharacterized protein LOC107617476 isoform X7 K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 107634053 TIMELESS-interacting protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
C Triple T complex
D 107613380 telomere length regulation protein TEL2 homolog isoform X1 K11137 TELO2; telomere length regulation protein
D 107622643 uncharacterized protein LOC107622643 isoform X1 K20403 TTI1; TELO2-interacting protein 1
D 107622628 uncharacterized protein At2g39910 K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D 107640725 uncharacterized protein LOC107640725 isoform X1 K23390 BAG6; large proline-rich protein BAG6
D 107617956 Golgi to ER traffic protein 4 homolog K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D 107618107 serine/threonine-protein kinase ATR isoform X1 K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 107622505 serine/threonine-protein kinase ATM isoform X2 K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 107637235 14-3-3 protein 10-like K06630 YWHAE; 14-3-3 protein epsilon
D 107634771 14-3-3-like protein GF14 iota K06630 YWHAE; 14-3-3 protein epsilon
D 107606164 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 107606197 14-3-3-like protein B K06630 YWHAE; 14-3-3 protein epsilon
D 107624749 14-3-3-like protein D K06630 YWHAE; 14-3-3 protein epsilon
D 107635748 14-3-3-like protein A K06630 YWHAE; 14-3-3 protein epsilon
D 107622960 14-3-3-like protein C K06630 YWHAE; 14-3-3 protein epsilon
D 107610000 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 107632191 14-3-3-like protein C K06630 YWHAE; 14-3-3 protein epsilon
D 107612575 14-3-3-like protein D K06630 YWHAE; 14-3-3 protein epsilon
D 107613271 14-3-3-like protein B isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 107640623 14-3-3-like protein GF14 iota K06630 YWHAE; 14-3-3 protein epsilon
D 107645614 wee1-like protein kinase K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 107638526 uncharacterized protein LOC107638526 K20780 MDC1; mediator of DNA damage checkpoint protein 1
D 107618311 serine/threonine-protein kinase Nek2 isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 107645452 serine/threonine-protein kinase Nek6 isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 107645831 serine/threonine-protein kinase Nek2 isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 107632585 serine/threonine-protein kinase Nek5 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 107613487 serine/threonine-protein kinase Nek5 isoform X2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 107645206 serine/threonine-protein kinase Nek4 isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 107624924 serine/threonine-protein kinase Nek4-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 107625471 serine/threonine-protein kinase Nek6 isoform X2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 107605523 protein downstream neighbor of Son K22422 DONSON; protein downstream neighbor of Son
D 107628006 protein downstream neighbor of Son-like isoform X1 K22422 DONSON; protein downstream neighbor of Son
D 107648722 protein downstream neighbor of Son-like isoform X1 K22422 DONSON; protein downstream neighbor of Son
D 107612786 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 107629321 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 107645701 protein SDE2 homolog K25059 SDE2; replication stress response regulator SDE2
D 107609992 protein DECREASED SIZE EXCLUSION LIMIT 1 K24770 DSE1; protein decreased size exclusion limit 1
B Other factors with a suspected DNA repair function
C DNA polymerases
D 107647534 helicase and polymerase-containing protein TEBICHI K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 107621537 DNA polymerase V K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 107641540 DNA-directed primase/polymerase protein K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 107647327 DNA cross-link repair protein SNM1 isoform X1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 107620971 LOW QUALITY PROTEIN: protein artemis K15340 DCLRE1A; DNA cross-link repair 1A protein
D 107624433 DNA cross-link repair protein SNM1 isoform X1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 107629917 5' exonuclease Apollo K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
D 107616650 exonuclease V, chloroplastic-like K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 107629181 exonuclease V, chloroplastic K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 107605134 endonuclease V isoform X1 K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 107624235 DNA annealing helicase and endonuclease ZRANB3 K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 107631041 endonuclease 1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 107618947 endonuclease 2 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 107631042 endonuclease 4 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D 107629844 switch 2 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 107625321 pre-mRNA-processing factor 19 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 107626518 cell division cycle 5-like protein isoform X1 K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 107625479 cell division cycle 5-like protein isoform X1 K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 107631762 pre-mRNA-splicing factor SPF27 homolog isoform X1 K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 107643399 pre-mRNA-splicing factor SPF27 homolog K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 107639044 protein pleiotropic regulatory locus 1 K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 107640856 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 107640529 deoxyuridine 5'-triphosphate nucleotidohydrolase-like isoform X2 K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 107626711 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 107608889 deoxyuridine 5'-triphosphate nucleotidohydrolase isoform X1 K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 107620128 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 107630954 ribonucleoside-diphosphate reductase large subunit K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 107637729 ribonucleoside-diphosphate reductase small chain A K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 107605012 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
C BER (base exicision repair)
D DNA glycosylases
E 107639618 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 107628732 uracil-DNA glycosylase, mitochondrial isoform X1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 107640129 probable DNA-3-methyladenine glycosylase 2 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 107610121 uncharacterized protein LOC107610121 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 107645400 DNA-3-methyladenine glycosylase isoform X1 K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 107622783 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 107610150 uncharacterized protein LOC107610150 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 107613804 uncharacterized protein LOC107613804 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 107615895 uncharacterized protein LOC107615895 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 107618005 uncharacterized protein LOC107618005 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 107641256 uncharacterized protein LOC107641256 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 107641953 uncharacterized protein LOC107641953 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 107617371 formamidopyrimidine-DNA glycosylase isoform X1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 107628993 endonuclease III homolog 1, chloroplastic K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 107613570 endonuclease III homolog 2, chloroplastic-like isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 107632626 putative DNA glycosylase At3g47830 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 107625412 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
D DNA ligase
D DNA polymerase I
E 107608978 DNA polymerase I A, chloroplastic/mitochondrial K02335 polA; DNA polymerase I [EC:2.7.7.7]
E 107631514 DNA polymerase I A, chloroplastic/mitochondrial K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E 107608978 DNA polymerase I A, chloroplastic/mitochondrial K02335 polA; DNA polymerase I [EC:2.7.7.7]
E 107631514 DNA polymerase I A, chloroplastic/mitochondrial K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 107631236 uncharacterized protein LOC107631236 K07456 mutS2; DNA mismatch repair protein MutS2
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E 107630398 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E 107615799 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
E 107630046 LOW QUALITY PROTEIN: DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
E 107630395 DNA repair protein recA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
D RecFOR pathway proteins
E 107615799 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
E 107630046 LOW QUALITY PROTEIN: DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
E 107630395 DNA repair protein recA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
E 107612828 uncharacterized protein LOC107612828 K04485 radA; DNA repair protein RadA/Sms
E 107619377 uncharacterized protein LOC107619377 isoform X2 K04485 radA; DNA repair protein RadA/Sms
E 107625517 ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X1 K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F 107622832 DNA gyrase subunit A, chloroplastic/mitochondrial isoform X1 K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F 107645558 DNA gyrase subunit B, chloroplastic/mitochondrial K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F 107617274 uncharacterized protein LOC107617274 isoform X1 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D 107615799 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
D 107630046 LOW QUALITY PROTEIN: DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
D 107630395 DNA repair protein recA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
D 107630398 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D 107640856 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 107640529 deoxyuridine 5'-triphosphate nucleotidohydrolase-like isoform X2 K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 107626711 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 107608889 deoxyuridine 5'-triphosphate nucleotidohydrolase isoform X1 K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 107620128 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024