+D GENES KO
#
KEGG Orthology (KO) - Amycolatopsis mediterranei S699
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:amn00010]
D RAM_36125 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RAM_12465 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RAM_14265 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RAM_12510 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RAM_41410 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RAM_19990 fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RAM_46720 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RAM_14230 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RAM_14220 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAM_14225 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RAM_02345 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RAM_41830 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAM_42110 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAM_12555 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RAM_10740 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RAM_10070 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RAM_11045 2-oxoglutarate dehydrogenase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RAM_11050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_35575 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_02775 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RAM_02770 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RAM_17550 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RAM_17820 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RAM_02285 alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RAM_20370 alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RAM_04495 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_36640 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_19525 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_37030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_07100 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_27210 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAM_25435 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAM_45240 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAM_19565 6-carboxyhexanoate-CoA ligase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D RAM_17100 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RAM_43300 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RAM_13220 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D RAM_47455 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RAM_05875 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RAM_06805 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RAM_13870 PTS system, glucose/maltose/N-acetylglucosamine-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:amn00020]
D RAM_43260 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RAM_43385 citrate synthase 2 K01647 CS; citrate synthase [EC:2.3.3.1]
D RAM_24705 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RAM_25225 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RAM_04255 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RAM_40855 kgd; alpha-ketoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D RAM_11050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_35575 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_02775 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RAM_02770 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RAM_04105 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAM_23265 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAM_04100 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RAM_23270 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RAM_04340 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAM_16370 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAM_11965 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAM_04335 succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAM_16375 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAM_11970 fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAM_04350 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RAM_16365 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RAM_04345 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RAM_13045 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RAM_37385 fumarate hydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D RAM_37390 fumarate hydratase subunit beta K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D RAM_41425 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RAM_23625 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RAM_08940 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D RAM_47455 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RAM_10740 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RAM_10070 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RAM_11045 2-oxoglutarate dehydrogenase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:amn00030]
D RAM_14265 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RAM_14260 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RAM_14250 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D RAM_46520 hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D RAM_31100 3-carboxymuconate cyclase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D RAM_00015 6-phosphogluconate dehydrogenase-like protein K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RAM_02020 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RAM_14085 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RAM_03325 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RAM_03330 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RAM_14275 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RAM_11520 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RAM_11525 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RAM_14270 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RAM_34950 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RAM_33730 putative phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D RAM_27920 putative phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D RAM_04500 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D RAM_47780 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D RAM_21340 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D RAM_46630 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D RAM_00410 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RAM_42295 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RAM_11950 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D RAM_11945 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RAM_39665 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RAM_07115 threonine dehydrogenase and related Zn-dependent dehydrogenase K22969 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D RAM_09145 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RAM_19920 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RAM_05905 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D RAM_31080 carbohydrate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D RAM_19990 fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RAM_46720 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RAM_41410 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RAM_12510 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:amn00040]
D RAM_22600 pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D RAM_22595 pectate lyase K22539 PLY; pectate lyase [EC:4.2.2.2]
D RAM_22590 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D RAM_00530 UDP glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RAM_21740 UDP glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RAM_42685 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RAM_22425 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D RAM_14085 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RAM_22430 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D RAM_23150 putative L-arabinose isomerase protein K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D RAM_22420 ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D RAM_03770 D-xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D RAM_34755 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D RAM_22540 xylitol oxidase K00594 xyoA; alditol oxidase [EC:1.1.3.41]
D RAM_23140 L-rhamnose isomerase-like protein K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D RAM_23155 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D RAM_37145 threonine dehydrogenase and related Zn-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D RAM_26485 dihydroxy-acid dehydratase K22186 xylD; xylonate dehydratase [EC:4.2.1.82]
D RAM_31775 fumarylacetoacetate (FAA) hydrolase K14259 kdaD; 2-dehydro-3-deoxy-D-arabinonate dehydratase [EC:4.2.1.141]
D RAM_17715 L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D RAM_44605 L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:amn00051]
D RAM_38105 beta-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D RAM_43265 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RAM_08095 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RAM_41165 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RAM_04620 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RAM_41180 manB; phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RAM_05170 mannose-1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RAM_00585 GDPmannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RAM_17715 L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D RAM_44605 L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D RAM_15725 oxidoreductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D RAM_09345 oxidoreductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D RAM_15690 amidohydrolase K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120]
D RAM_09350 amidohydrolase K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120]
D RAM_09315 mandelate racemase K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D RAM_15700 mandelate racemase K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D RAM_23140 L-rhamnose isomerase-like protein K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D RAM_23155 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D RAM_12510 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RAM_41410 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RAM_22920 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D RAM_40165 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D RAM_37145 threonine dehydrogenase and related Zn-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D RAM_22540 xylitol oxidase K00594 xyoA; alditol oxidase [EC:1.1.3.41]
D RAM_34755 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D RAM_02805 GDP-mannose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D RAM_19990 fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RAM_46720 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RAM_14230 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RAM_34950 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RAM_22915 PTS system, fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D RAM_22910 PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RAM_06950 mannose/sorbose-specific IIA subunit of PTS system K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:amn00052]
D RAM_17100 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RAM_43300 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RAM_12285 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RAM_42780 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D RAM_02405 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAM_12280 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAM_01020 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAM_25365 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAM_27775 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAM_42685 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RAM_36125 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RAM_12465 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RAM_23105 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RAM_40230 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RAM_29185 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RAM_23405 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RAM_15915 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RAM_38460 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D RAM_01135 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RAM_19935 alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D RAM_04355 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_09395 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_09755 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_08870 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_37970 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_34915 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_18540 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_25670 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_19095 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_46110 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_17780 short-chain dehydrogenase/reductase SDR K21620 sorbD; galactitol 2-dehydrogenase [EC:1.1.1.16]
D RAM_12510 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RAM_15985 mandelate racemase/gluconate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D RAM_37180 galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D RAM_46510 galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D RAM_16215 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RAM_35015 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RAM_35505 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RAM_19965 phosphosugar isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:amn00053]
D RAM_00530 UDP glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RAM_21740 UDP glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RAM_09145 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RAM_19920 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RAM_15725 oxidoreductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D RAM_09345 oxidoreductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D RAM_22425 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D RAM_04495 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_36640 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_19525 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_37030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_07100 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_30635 glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D RAM_31775 fumarylacetoacetate (FAA) hydrolase K14259 kdaD; 2-dehydro-3-deoxy-D-arabinonate dehydratase [EC:4.2.1.141]
D RAM_30640 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41]
D RAM_31815 NAD-dependent epimerase/dehydratase K18981 udh; uronate dehydrogenase [EC:1.1.1.203]
D RAM_30655 NAD-dependent epimerase/dehydratase K18981 udh; uronate dehydrogenase [EC:1.1.1.203]
C 00500 Starch and sucrose metabolism [PATH:amn00500]
D RAM_16215 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RAM_35015 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RAM_35505 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RAM_42685 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RAM_08725 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_37935 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_22145 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_38915 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_44210 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_26745 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_37330 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_04785 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_06570 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_20400 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_00430 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_42975 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_41720 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_19650 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_26480 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_12430 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_20350 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RAM_26450 glycoside hydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RAM_20880 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RAM_37965 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RAM_37950 cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RAM_20035 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RAM_41810 endo-1,4-beta-glucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RAM_26445 cellulose 1,4-beta-cellobiosidase K19668 CBH2; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.91]
D RAM_05875 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RAM_06805 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D RAM_02910 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RAM_22730 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RAM_08365 glycosyl transferase K16150 K16150; glycogen synthase [EC:2.4.1.11]
D RAM_13205 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RAM_08380 hypothetical protein K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RAM_08145 starch phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D RAM_13195 trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D RAM_43985 glucan 1,4-alpha-glucosidase K01178 SGA1; glucoamylase [EC:3.2.1.3]
D RAM_23375 glucan 1,4-alpha-glucosidase K01178 SGA1; glucoamylase [EC:3.2.1.3]
D RAM_13165 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RAM_13200 hypothetical protein K16146 pep2; maltokinase [EC:2.7.1.175]
D RAM_13190 alpha amylase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D RAM_22735 glycosyl transferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D RAM_13870 PTS system, glucose/maltose/N-acetylglucosamine-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RAM_13170 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D RAM_15565 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D RAM_13185 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D RAM_13175 maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D RAM_13180 maltooligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D RAM_44490 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D RAM_15145 glycosyl hydrolase K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64]
D RAM_36125 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RAM_12465 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RAM_14265 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RAM_43265 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:amn00520]
D RAM_01400 chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D RAM_12545 chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D RAM_36275 chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D RAM_38640 chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D RAM_25705 chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D RAM_22230 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RAM_41745 beta-glucosidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RAM_45195 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RAM_42445 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RAM_34245 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RAM_16855 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RAM_31120 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RAM_25800 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RAM_35860 chitosanase K01233 csn; chitosanase [EC:3.2.1.132]
D RAM_31240 beta-mannosidase K15855 csxA; exo-1,4-beta-D-glucosaminidase [EC:3.2.1.165]
D RAM_17400 beta-mannosidase K15855 csxA; exo-1,4-beta-D-glucosaminidase [EC:3.2.1.165]
D RAM_25805 beta-mannosidase K15855 csxA; exo-1,4-beta-D-glucosaminidase [EC:3.2.1.165]
D RAM_13870 PTS system, glucose/maltose/N-acetylglucosamine-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RAM_13855 PTS system, glucose/maltose/N-acetylglucosamine-specific IIC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D RAM_46780 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D RAM_43265 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RAM_03755 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RAM_38205 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RAM_44060 glucosamine-6-phosphate deaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RAM_03715 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RAM_42290 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RAM_45215 murQ; N-acetylmuramic acid-6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D RAM_09670 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D RAM_39915 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RAM_02315 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RAM_03825 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RAM_38065 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RAM_45705 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RAM_38465 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D RAM_16715 hypothetical protein K15921 xynD; arabinoxylan arabinofuranohydrolase [EC:3.2.1.55]
D RAM_17950 alpha-N-arabinofuranosidase K20844 abf1; non-reducing end alpha-L-arabinofuranosidase [EC:3.2.1.55]
D RAM_17955 alpha-N-arabinofuranosidase K20844 abf1; non-reducing end alpha-L-arabinofuranosidase [EC:3.2.1.55]
D RAM_16745 alpha-L-arabinofuranosidase K20844 abf1; non-reducing end alpha-L-arabinofuranosidase [EC:3.2.1.55]
D RAM_15595 alpha-N-arabinofuranosidase K20844 abf1; non-reducing end alpha-L-arabinofuranosidase [EC:3.2.1.55]
D RAM_08670 alpha-N-arabinofuranosidase K20844 abf1; non-reducing end alpha-L-arabinofuranosidase [EC:3.2.1.55]
D RAM_20360 alpha-N-arabinofuranosidase K20844 abf1; non-reducing end alpha-L-arabinofuranosidase [EC:3.2.1.55]
D RAM_32880 beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D RAM_36125 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RAM_12465 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RAM_13220 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D RAM_42685 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RAM_00530 UDP glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RAM_21740 UDP glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RAM_25350 UDP-sulfoquinovose synthase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D RAM_12285 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RAM_42780 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D RAM_02405 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAM_12280 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAM_01020 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAM_25365 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAM_27775 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAM_01135 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RAM_06950 mannose/sorbose-specific IIA subunit of PTS system K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RAM_14265 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RAM_08095 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RAM_41165 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RAM_04620 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RAM_41180 manB; phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RAM_05170 mannose-1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RAM_00585 GDPmannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RAM_01055 aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D RAM_02805 GDP-mannose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D RAM_02910 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RAM_22730 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:amn00620]
D RAM_27210 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAM_25435 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAM_45240 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAM_02775 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RAM_02770 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RAM_10740 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RAM_10070 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RAM_11045 2-oxoglutarate dehydrogenase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RAM_11050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_35575 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_21490 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D RAM_17550 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RAM_17820 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RAM_02285 alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RAM_20370 alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RAM_33725 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RAM_27880 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RAM_12555 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RAM_04760 acetyl/propionyl-CoA carboxylase, biotin carboxylase subunit fused with biotin carboxyl carrier subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RAM_09650 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RAM_04495 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_36640 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_19525 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_37030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_07100 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_19565 6-carboxyhexanoate-CoA ligase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D RAM_10735 L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D RAM_33685 thiamine pyrophosphate protein K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D RAM_23065 pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D RAM_16815 thiamine pyrophosphate protein K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D RAM_35840 L-lactate 2-monooxygenase K00467 E1.13.12.4; lactate 2-monooxygenase [EC:1.13.12.4]
D RAM_26910 beta-lactamase class B K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RAM_15685 hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D RAM_40915 malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RAM_43745 malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RAM_08940 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D RAM_23625 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RAM_13045 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RAM_37385 fumarate hydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D RAM_37390 fumarate hydratase subunit beta K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D RAM_41425 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RAM_47455 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RAM_09695 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D RAM_08325 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D RAM_08015 putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12985 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_47360 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_41655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_19540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_35680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_17205 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_40565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_08620 putative alpha-isopropylmalate/homocitrate synthase family transferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RAM_45590 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:amn00630]
D RAM_08320 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D RAM_27210 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAM_25435 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAM_45240 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAM_09695 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D RAM_08325 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D RAM_23625 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RAM_43260 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RAM_43385 citrate synthase 2 K01647 CS; citrate synthase [EC:2.3.3.1]
D RAM_24705 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RAM_25225 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RAM_08015 putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12985 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_47360 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_41655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_19540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_35680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_17205 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_40565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_08010 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RAM_39870 methylmalonyl-CoA mutase, large subunit K14447 ecm; ethylmalonyl-CoA mutase [EC:5.4.99.63]
D RAM_00395 citrate lyase subunit beta K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D RAM_17130 acetyl/propionyl-CoA carboxylase, carboxyltransferase subunit K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D RAM_04760 acetyl/propionyl-CoA carboxylase, biotin carboxylase subunit fused with biotin carboxyl carrier subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RAM_04820 acetyl/propionyl-CoA carboxylase, carboxyltransferase subunit K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D RAM_04815 acetyl/propionyl-CoA carboxylase, epsilon subunit K27095 accE5; acyl-CoA carboxylase epsilon subunit
D RAM_04655 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAM_04660 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAM_24425 methylaspartate mutase E subunit K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D RAM_24180 methylaspartate/glutamate mutase E subunit K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D RAM_24420 methylaspartate mutase subunit S K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D RAM_24175 methylaspartate mutase K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D RAM_46805 glycolate oxidase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D RAM_40510 oxidoreductase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D RAM_09390 glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D RAM_43585 hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RAM_34855 haloacid dehalogenase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RAM_13700 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_09170 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_06190 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_06235 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_11710 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_13150 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_09215 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAM_38815 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAM_44940 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAM_09200 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RAM_25370 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RAM_09205 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAM_11050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_35575 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_09210 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RAM_25410 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RAM_23330 glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D RAM_23320 hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D RAM_23325 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D RAM_37325 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D RAM_09385 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RAM_23365 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RAM_40475 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D RAM_11945 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RAM_39665 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RAM_40855 kgd; alpha-ketoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D RAM_16290 formate dehydrogenase alpha subunit, selenocysteine-containing protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RAM_16295 formate dehydrogenase alpha subunit, selenocysteine-containing protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RAM_29320 formate dehydrogenase alpha subunit, selenocysteine-containing protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RAM_29325 formate dehydrogenase alpha subunit, selenocysteine-containing protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RAM_16285 Fe-S-cluster-containing hydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RAM_29330 Fe-S-cluster-containing hydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RAM_02290 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RAM_38790 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:amn00640]
D RAM_27210 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAM_25435 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAM_45240 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAM_42440 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RAM_19565 6-carboxyhexanoate-CoA ligase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D RAM_33725 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RAM_27880 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RAM_38900 pyruvate dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RAM_47265 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RAM_38895 pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RAM_47270 pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RAM_36570 2-oxoisovalerate dehydrogenase E1 component K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D RAM_38890 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RAM_47275 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RAM_11050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_35575 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_41510 acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D RAM_02780 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_08195 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_40560 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAM_04760 acetyl/propionyl-CoA carboxylase, biotin carboxylase subunit fused with biotin carboxyl carrier subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RAM_00975 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RAM_40485 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RAM_06070 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RAM_17130 acetyl/propionyl-CoA carboxylase, carboxyltransferase subunit K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D RAM_04820 acetyl/propionyl-CoA carboxylase, carboxyltransferase subunit K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D RAM_04815 acetyl/propionyl-CoA carboxylase, epsilon subunit K27095 accE5; acyl-CoA carboxylase epsilon subunit
D RAM_08010 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RAM_04655 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAM_04660 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAM_04100 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RAM_23270 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RAM_04105 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAM_23265 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAM_15490 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RAM_34045 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00650 Butanoate metabolism [PATH:amn00650]
D RAM_08015 putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12985 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_47360 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_41655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_19540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_35680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_17205 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_40565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_45845 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RAM_46290 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RAM_37395 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RAM_39790 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RAM_24255 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RAM_20695 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RAM_40560 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAM_02780 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_08195 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_19670 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_07995 NADPH:quinone reductase and related Zn-dependent oxidoreductase K17829 ccrA; crotonyl-CoA reductase [EC:1.3.1.86]
D RAM_21490 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D RAM_33170 poly(R)-hydroxyalkanoic acid synthase, class II K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RAM_40675 alpha/beta hydrolase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RAM_09425 glutaconate CoA-transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D RAM_09430 glutaconate CoA-transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D RAM_40475 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D RAM_40455 arylmalonate decarboxylase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D RAM_04340 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAM_16370 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAM_11965 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAM_04335 succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAM_16375 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAM_11970 fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAM_04350 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RAM_16365 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RAM_04345 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RAM_45505 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D RAM_00975 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RAM_40485 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RAM_06070 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RAM_30345 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_20945 gabD2; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_19560 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_40480 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_12585 gabD2; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_02775 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RAM_02770 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RAM_04965 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RAM_07420 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RAM_01385 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D RAM_16625 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D RAM_30535 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D RAM_32650 acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4]
D RAM_22015 methane monooxygenase K18223 prmA; propane 2-monooxygenase large subunit [EC:1.14.13.227]
D RAM_22025 methane/phenol/toluene hydroxylase K18224 prmC; propane 2-monooxygenase small subunit [EC:1.14.13.227]
D RAM_22030 monooxygenase component MmoB/DmpM K18226 prmD; propane monooxygenase coupling protein
D RAM_22020 CDP-6-deoxy-delta-3,4-glucoseen reductase K18225 prmB; propane monooxygenase reductase component [EC:1.18.1.-]
D RAM_22045 alcohol dehydrogenase K18382 adh1; NAD+-dependent secondary alcohol dehydrogenase Adh1 [EC:1.1.1.-]
D RAM_15345 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAM_08560 acetolactate synthase 1 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAM_13320 acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAM_01730 acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAM_40515 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAM_08565 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RAM_36565 threonine dehydrogenase and related Zn-dependent dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism [PATH:amn00660]
D RAM_15345 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAM_08560 acetolactate synthase 1 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAM_13320 acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAM_01730 acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAM_40515 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAM_08565 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RAM_23535 hypothetical protein K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22]
D RAM_04100 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RAM_23270 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RAM_04105 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAM_23265 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RAM_24425 methylaspartate mutase E subunit K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D RAM_24180 methylaspartate/glutamate mutase E subunit K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D RAM_24420 methylaspartate mutase subunit S K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D RAM_24175 methylaspartate mutase K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D RAM_00395 citrate lyase subunit beta K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D RAM_08750 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RAM_08755 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RAM_08615 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:amn00562]
D RAM_30480 phosphoesterase K21302 sapM; phosphatidylinositol-3-phosphatase [EC:3.1.3.64]
D RAM_16410 phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D RAM_39000 phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D RAM_45985 phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D RAM_02630 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RAM_13225 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RAM_42855 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RAM_20665 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RAM_47610 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D RAM_11615 hydrolase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D RAM_09590 myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D RAM_09580 inosose dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D RAM_37245 inosose dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D RAM_09545 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D RAM_09550 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D RAM_09560 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D RAM_15490 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RAM_34045 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RAM_14230 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:amn00190]
D RAM_02665 NADH dehydrogenase I subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D RAM_02670 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D RAM_02675 NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D RAM_02680 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D RAM_02685 NADH dehydrogenase I subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D RAM_02690 NADH dehydrogenase I subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D RAM_23310 NADH dehydrogenase I subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D RAM_02695 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D RAM_02700 NADH dehydrogenase I subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D RAM_02705 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D RAM_02710 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D RAM_02715 NADH:ubiquinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D RAM_02720 NADH:ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D RAM_02725 NADH dehydrogenase I subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D RAM_02730 NADH:ubiquinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D RAM_26605 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D RAM_42040 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D RAM_31720 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D RAM_04340 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAM_16370 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAM_11965 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RAM_04335 succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAM_16375 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAM_11970 fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RAM_04350 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RAM_16365 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RAM_04345 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RAM_11215 ubiquinol-cytochrome C reductase iron-sulfur subunit K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RAM_29205 ubiquinol-cytochrome C reductase iron-sulfur subunit K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RAM_11220 ubiquinol-cytochrome C reductase cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D RAM_33545 ubiquinol-cytochrome C reductase cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D RAM_29210 ubiquinol-cytochrome C reductase cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D RAM_11210 ubiquinol-cytochrome C reductase cytochrome C subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D RAM_14280 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RAM_11175 integral membrane protein K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D RAM_11205 cytochrome C oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D RAM_15560 cytochrome C oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D RAM_39710 cytochrome C oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D RAM_29200 cytochrome C oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D RAM_11170 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D RAM_14350 cytochrome C oxidase subunit XV assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RAM_00825 cytochrome bd-I oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RAM_05360 cytochrome bd-I oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RAM_27905 cytochrome bd-I oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RAM_00830 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RAM_27910 cytochrome bd-I oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RAM_39950 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RAM_39940 F-type H+-transporting ATPase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RAM_39945 F-type H+-transporting ATPase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RAM_39955 F-type H+-transporting ATPase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RAM_39935 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RAM_39970 F-type H+-transporting ATPase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RAM_39960 F-type H+-transporting ATPase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RAM_20625 F-type H+-transporting ATPase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RAM_39965 F-type H+-transporting ATPase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RAM_44930 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D RAM_08775 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:amn00680]
D RAM_33650 threonine dehydrogenase and related Zn-dependent dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D RAM_16290 formate dehydrogenase alpha subunit, selenocysteine-containing protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RAM_16295 formate dehydrogenase alpha subunit, selenocysteine-containing protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RAM_29320 formate dehydrogenase alpha subunit, selenocysteine-containing protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RAM_29325 formate dehydrogenase alpha subunit, selenocysteine-containing protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RAM_16285 Fe-S-cluster-containing hydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RAM_29330 Fe-S-cluster-containing hydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RAM_09215 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAM_38815 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAM_44940 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAM_41830 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAM_42110 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAM_23625 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RAM_00395 citrate lyase subunit beta K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D RAM_19990 fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RAM_46720 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RAM_41410 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D RAM_12510 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D RAM_31860 formaldehyde-activating enzyme K10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147]
D RAM_33725 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RAM_27880 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RAM_27210 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAM_25435 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAM_45240 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAM_02345 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RAM_08605 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAM_43430 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RAM_39705 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RAM_35420 fbiC; FO synthase K11779 fbiC; FO synthase [EC:2.5.1.147 4.3.1.32]
D RAM_08780 hypothetical protein K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105]
D RAM_05205 LPPG:FO 2-phospho-L-lactate transferase K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28]
D RAM_05200 F420-0--gamma-glutamyl ligase K24998 fbiB; dehydro coenzyme F420 reductase / coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:1.3.8.17 6.3.2.31 6.3.2.34]
C 00910 Nitrogen metabolism [PATH:amn00910]
D RAM_05705 MFS transporter nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D RAM_05695 nitrate reductase catalytic subunit K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D RAM_05700 electron transfer subunit of assimilatory nitrate reductase K00360 nasB; assimilatory nitrate reductase electron transfer subunit [EC:1.7.99.-]
D RAM_05710 nitrite reductase (NAD(P)H) large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D RAM_05715 nitrite reductase (NAD(P)H) small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D RAM_34235 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D RAM_35035 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RAM_06825 glutamate dehydrogenase (NAD(P)+) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RAM_25280 glutamate dehydrogenase (NAD(P)+) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RAM_13700 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_09170 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_06190 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_06235 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_11710 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_13150 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_11740 glutamate synthase (NADPH/NADH) large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RAM_36100 glutamate synthase (NADPH/NADH) large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RAM_11745 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RAM_36105 glutamate synthase (NADPH/NADH) small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RAM_11280 carbonic anhydrase fused with sulfate permease K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D RAM_11285 carbonic anhydrase fused with sulfate permease K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D RAM_18300 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D RAM_44645 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:amn00920]
D RAM_45940 taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D RAM_25565 sulfonate/nitrate/taurine ABC transporter periplasmic protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAM_01310 sulfonate/nitrate/taurine ABC transporter periplasmic protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAM_07825 sulfonate/nitrate/taurine ABC transporter periplasmic protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAM_25575 sulfonate/nitrate/taurine ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D RAM_07835 sulfonate/nitrate/taurine ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D RAM_01305 sulfonate/nitrate/taurine ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D RAM_25570 nitrate/sulfonate/bicarbonate ABC transporter ATPase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RAM_07830 sulfonate/nitrate/taurine ABC transporter ATPase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RAM_01300 sulfonate/nitrate/taurine ABC transporter ATPase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RAM_25560 alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D RAM_06600 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D RAM_45520 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D RAM_14455 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RAM_34170 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RAM_14460 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RAM_34165 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RAM_34160 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D RAM_34150 ferredoxin-nitrite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D RAM_27835 integral membrane protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D RAM_12295 rhodanese-like protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RAM_46225 rhodanese-like protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RAM_02590 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RAM_42575 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RAM_40750 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RAM_41635 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RAM_00310 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RAM_16630 enoyl-CoA hydratase K20036 dmdD; (methylthio)acryloyl-CoA hydratase [EC:4.2.1.155]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:amn00061]
D RAM_04760 acetyl/propionyl-CoA carboxylase, biotin carboxylase subunit fused with biotin carboxyl carrier subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RAM_10675 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D RAM_17785 acyl carrier protein K02078 acpP; acyl carrier protein
D RAM_20425 acyl carrier protein K02078 acpP; acyl carrier protein
D RAM_20540 acyl carrier protein K02078 acpP; acyl carrier protein
D RAM_20615 acyl carrier protein K02078 acpP; acyl carrier protein
D RAM_18450 acyl carrier protein K02078 acpP; acyl carrier protein
D RAM_23450 acyl carrier protein K02078 acpP; acyl carrier protein
D RAM_21290 acyl carrier protein K02078 acpP; acyl carrier protein
D RAM_10685 [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RAM_14755 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RAM_10680 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RAM_20500 3-oxoacyl-(ACP) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RAM_18465 3-oxoacyl-(ACP) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RAM_20725 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RAM_01345 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RAM_10670 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAM_17790 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAM_20430 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAM_20610 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAM_15980 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_12000 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_01070 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_15285 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_38350 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_47355 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_20600 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_27660 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_27680 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_28820 short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_29125 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_17210 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_17655 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_47835 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_06765 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_19430 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_07280 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_20980 fatty acid desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D RAM_12435 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_02445 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_05070 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_15930 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_33180 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_36970 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_37170 acyl-CoA synthetase-related protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:amn00071]
D RAM_08015 putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12985 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_47360 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_41655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_19540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_35680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_17205 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_40565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_13370 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAM_36930 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAM_19635 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAM_23485 acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAM_40560 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAM_02780 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_08195 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_41510 acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D RAM_36835 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAM_14670 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAM_40615 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAM_15965 acyl-CoA dehydrogenase domain-containing protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAM_07855 acyl-CoA dehydrogenase FadE4 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAM_36945 acyl-CoA dehydrogenase domain-containing protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAM_42965 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAM_43140 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAM_12600 acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D RAM_11540 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RAM_32660 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RAM_33165 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RAM_12435 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_02445 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_05070 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_15930 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_33180 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_36970 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_37170 acyl-CoA synthetase-related protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_32810 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D RAM_22320 ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D RAM_02005 ferredoxin--NAD+ reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D RAM_09290 ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D RAM_17550 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RAM_17820 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RAM_04495 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_36640 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_19525 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_37030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_07100 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:amn00121]
D RAM_11735 short chain dehydrogenase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:amn00561]
D RAM_09385 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RAM_23365 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RAM_04495 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_36640 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_19525 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_37030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_07100 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_02285 alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RAM_20370 alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RAM_39805 dihydroxyacetone kinase, DhaK subunit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D RAM_39800 dihydroxyacetone kinase K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D RAM_39795 PTS system Hpr-like protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D RAM_04715 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RAM_22465 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RAM_22480 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RAM_30920 HAD family hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D RAM_05335 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RAM_12495 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RAM_30760 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RAM_24840 sphingosine kinase/diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RAM_11780 hypothetical protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D RAM_12740 hypothetical protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D RAM_40410 hypothetical protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D RAM_41020 hypothetical protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D RAM_22840 esterase K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122]
D RAM_06890 lipase class 2 K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D RAM_01025 glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D RAM_03845 N-acetyl-glucosamine transferase K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D RAM_25350 UDP-sulfoquinovose synthase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D RAM_19935 alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D RAM_04355 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_09395 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_09755 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_08870 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_37970 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_34915 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_18540 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_25670 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_19095 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_46110 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:amn00564]
D RAM_08790 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RAM_04725 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RAM_22485 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RAM_43225 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RAM_05335 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RAM_12495 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RAM_30760 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RAM_24840 sphingosine kinase/diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D RAM_16410 phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D RAM_39000 phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D RAM_45985 phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D RAM_46605 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RAM_24045 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RAM_42230 methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D RAM_10030 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RAM_43960 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RAM_43955 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RAM_32225 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RAM_27120 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RAM_20790 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RAM_25415 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism [PATH:amn00565]
D RAM_43215 alkyldihydroxyacetonephosphate synthase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
D RAM_16410 phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D RAM_39000 phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D RAM_45985 phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:amn00600]
D RAM_25515 pyridoxal-dependent decarboxylase K01634 SGPL1; sphinganine-1-phosphate aldolase [EC:4.1.2.27]
D RAM_43025 glucosylceramidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D RAM_23105 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RAM_40230 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RAM_29185 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RAM_23405 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RAM_15915 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RAM_21175 neuraminidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D RAM_19935 alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D RAM_04355 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_09395 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_09755 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_08870 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_37970 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_34915 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_18540 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_25670 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_19095 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_46110 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D RAM_42445 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RAM_34245 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RAM_16855 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RAM_31120 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RAM_25800 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:amn00592]
D RAM_41510 acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D RAM_13370 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAM_36930 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAM_19635 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAM_23485 acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:amn01040]
D RAM_14345 stearoyl-CoA desaturase (delta-9 desaturase) K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RAM_22995 stearoyl-CoA desaturase (delta-9 desaturase) K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RAM_28480 stearoyl/acyl-CoA desaturase (delta-9 desaturase) K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RAM_42280 stearoyl-CoA desaturase (delta-9 desaturase) K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RAM_20980 fatty acid desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D RAM_10610 fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D RAM_10615 ferredoxin reductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase
D RAM_41510 acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D RAM_12560 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D RAM_19505 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D RAM_19580 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:amn00230]
D RAM_00410 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RAM_42295 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RAM_46340 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RAM_24170 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RAM_46600 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RAM_04120 phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RAM_46400 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D RAM_46420 phosphoribosylformylglycinamidine synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D RAM_46415 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RAM_46335 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RAM_05050 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D RAM_05055 phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RAM_11125 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RAM_46465 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RAM_46505 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RAM_04125 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RAM_26975 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RAM_37820 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RAM_47130 nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RAM_17530 surE; 5'(3')-nucleotidase/polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RAM_40170 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RAM_43675 NagD protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D RAM_04630 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RAM_15030 multi-copper oxidoreductase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RAM_44910 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D RAM_03940 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RAM_03950 inosine 5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RAM_34440 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RAM_39575 nucleoside triphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RAM_15460 carbon-monoxide dehydrogenase large subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D RAM_18520 carbon-monoxide dehydrogenase large subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D RAM_18935 carbon-monoxide dehydrogenase large subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D RAM_15465 carbon-monoxide dehydrogenase medium subunit K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D RAM_29435 carbon-monoxide dehydrogenase medium subunit K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D RAM_18525 carbon-monoxide dehydrogenase medium subunit K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D RAM_18945 carbon-monoxide dehydrogenase medium subunit K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D RAM_29440 carbon-monoxide dehydrogenase small subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D RAM_18530 carbon-monoxide dehydrogenase small subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D RAM_18950 carbon-monoxide dehydrogenase small subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D RAM_03995 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RAM_41470 inosine 5-monophosphate dehydrogenase K26110 guaB1; GMP reductase [EC:1.7.1.7]
D RAM_23350 deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D RAM_14005 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RAM_12180 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RAM_14635 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RAM_43595 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RAM_14630 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RAM_14530 dGTPase K01129 dgt; dGTPase [EC:3.1.5.1]
D RAM_33855 dGTPase K01129 dgt; dGTPase [EC:3.1.5.1]
D RAM_26970 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RAM_15135 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RAM_02370 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RAM_42090 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RAM_17050 RelA/SpoT domain-containing protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D RAM_01350 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D RAM_07980 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D RAM_46660 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RAM_11155 adenosine kinase K00856 ADK; adenosine kinase [EC:2.7.1.20]
D RAM_15265 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D RAM_04400 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D RAM_23775 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D RAM_03575 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RAM_10940 phosphohydrolase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D RAM_27130 HIT family hydrolase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D RAM_14455 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RAM_34170 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RAM_14460 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RAM_34165 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RAM_09770 urate oxidase K00365 uaZ; urate oxidase [EC:1.7.3.3]
D RAM_09775 transthyretin K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RAM_09780 OHCU decarboxylase K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D RAM_30860 Asp/Glu/hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D RAM_09790 L-hydantoinase/allantoinase K01466 allB; allantoinase [EC:3.5.2.5]
D RAM_09795 allantoicase K01477 alc; allantoicase [EC:3.5.3.4]
D RAM_43370 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RAM_43375 urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RAM_43380 urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:amn00240]
D RAM_13990 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RAM_13975 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RAM_13960 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RAM_13965 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RAM_32195 dihydroorotate dehydrogenase 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D RAM_28800 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RAM_46925 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RAM_13995 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RAM_10020 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RAM_34440 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RAM_04780 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RAM_30840 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RAM_30765 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RAM_47130 nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RAM_17530 surE; 5'(3')-nucleotidase/polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RAM_40170 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RAM_43675 NagD protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D RAM_04515 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RAM_13955 pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RAM_13080 indigoidine synthase A family protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D RAM_04385 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D RAM_10130 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RAM_14735 cytosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RAM_34630 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D RAM_47080 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D RAM_12180 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RAM_14635 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RAM_43595 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RAM_14630 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RAM_41100 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RAM_45095 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RAM_13245 dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RAM_04390 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D RAM_24060 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D RAM_20930 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RAM_32335 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D RAM_34095 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RAM_34090 hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D RAM_06430 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RAM_24295 N-carbamoyl-L-amino-acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RAM_35405 short-chain dehydrogenase/reductase SDR K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D RAM_27140 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:amn00250]
D RAM_11330 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RAM_24430 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D RAM_08800 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RAM_02825 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RAM_11165 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RAM_09595 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RAM_35520 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RAM_40805 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RAM_10950 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D RAM_22495 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RAM_30955 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RAM_24235 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RAM_46660 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RAM_46505 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RAM_13960 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RAM_45505 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D RAM_00975 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RAM_40485 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RAM_06070 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RAM_30345 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_20945 gabD2; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_19560 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_40480 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_12585 gabD2; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_11740 glutamate synthase (NADPH/NADH) large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RAM_36100 glutamate synthase (NADPH/NADH) large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RAM_11745 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RAM_36105 glutamate synthase (NADPH/NADH) small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RAM_35035 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RAM_06825 glutamate dehydrogenase (NAD(P)+) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RAM_25280 glutamate dehydrogenase (NAD(P)+) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RAM_13525 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D RAM_13700 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_09170 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_06190 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_06235 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_11710 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_13150 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_13990 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RAM_13975 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RAM_23420 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D RAM_46415 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RAM_03755 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RAM_38205 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RAM_44060 glucosamine-6-phosphate deaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RAM_46340 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RAM_24170 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:amn00260]
D RAM_45575 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RAM_45570 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RAM_40040 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RAM_40030 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D RAM_10265 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RAM_23435 pyridoxal-5'-phosphate-dependent protein beta subunit K01733 thrC; threonine synthase [EC:4.2.3.1]
D RAM_34305 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RAM_40035 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RAM_46545 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D RAM_24225 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D RAM_09215 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAM_38815 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAM_44940 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAM_09385 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RAM_23365 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D RAM_02345 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RAM_08605 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAM_43430 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RAM_39705 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RAM_35405 short-chain dehydrogenase/reductase SDR K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D RAM_17705 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RAM_09200 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RAM_25370 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RAM_09205 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAM_11050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_35575 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_09210 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RAM_25410 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RAM_13625 D-amino-acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
D RAM_32010 glycine amidinotransferase K00613 GATM; glycine amidinotransferase [EC:2.1.4.1]
D RAM_43960 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RAM_38845 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D RAM_13295 betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D RAM_06095 betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D RAM_38835 betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D RAM_13315 betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D RAM_21720 succinate-semialdehyde dehydrogenase (NADP+) K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D RAM_38785 sarcosine dehydrogenase K00309 dmg; dimethylglycine oxidase [EC:1.5.3.10]
D RAM_38800 sarcosine oxidase subunit alpha K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D RAM_38810 sarcosine oxidase beta subunit K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D RAM_38795 sarcosine oxidase subunit gamma K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D RAM_38805 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D RAM_41650 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D RAM_09225 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RAM_08300 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAM_41620 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAM_16880 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAM_30110 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAM_39605 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D RAM_11685 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RAM_11680 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RAM_35910 tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RAM_44120 diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D RAM_44125 L-2,4-diaminobutyric acid acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D RAM_44115 ectC; L-ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
D RAM_44110 ectoine hydroxylase K10674 ectD; ectoine hydroxylase [EC:1.14.11.55]
D RAM_13685 amino acid decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:amn00270]
D RAM_02590 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RAM_42575 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RAM_42585 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RAM_41650 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D RAM_26370 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAM_25035 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAM_14020 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RAM_26240 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D RAM_26235 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RAM_15030 multi-copper oxidoreductase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RAM_47565 N-ethylammeline chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D RAM_26965 hypothetical protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D RAM_35995 methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D RAM_39755 cystathionine gamma-synthase/methionine-gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D RAM_01805 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAM_31530 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAM_47315 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAM_41135 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RAM_26810 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RAM_31065 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D RAM_45575 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RAM_45570 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RAM_40040 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RAM_40750 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RAM_41635 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RAM_00310 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RAM_09810 O-acetylhomoserine (thiol)-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RAM_40755 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RAM_11100 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAM_24205 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAM_25270 glutamate--cysteine ligase GCS2 K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RAM_37350 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RAM_12295 rhodanese-like protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RAM_46225 rhodanese-like protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RAM_39605 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D RAM_23625 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RAM_02115 1-aminocyclopropane-1-carboxylate deaminase K17950 cuyA; L-cysteate sulfo-lyase [EC:4.4.1.25]
D RAM_09225 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RAM_08605 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAM_43430 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:amn00280]
D RAM_11100 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAM_24205 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAM_35720 valine dehydrogenase K00271 vdh; valine dehydrogenase (NAD+) [EC:1.4.1.23]
D RAM_38900 pyruvate dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RAM_47265 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RAM_38895 pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RAM_47270 pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RAM_36570 2-oxoisovalerate dehydrogenase E1 component K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D RAM_38890 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RAM_47275 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RAM_11050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_35575 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_36835 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAM_14670 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAM_40615 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAM_15965 acyl-CoA dehydrogenase domain-containing protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAM_07855 acyl-CoA dehydrogenase FadE4 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAM_36945 acyl-CoA dehydrogenase domain-containing protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAM_42965 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAM_43140 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RAM_29345 acyl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D RAM_40710 acyl-CoA dehydrogenase K11410 acdH; short-chain 2-methylacyl-CoA dehydrogenase [EC:1.3.8.5]
D RAM_36560 acyl-CoA dehydrogenase K11410 acdH; short-chain 2-methylacyl-CoA dehydrogenase [EC:1.3.8.5]
D RAM_02780 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_08195 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_40560 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAM_13370 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAM_36930 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAM_19635 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAM_23485 acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAM_17130 acetyl/propionyl-CoA carboxylase, carboxyltransferase subunit K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D RAM_04760 acetyl/propionyl-CoA carboxylase, biotin carboxylase subunit fused with biotin carboxyl carrier subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D RAM_04820 acetyl/propionyl-CoA carboxylase, carboxyltransferase subunit K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D RAM_04815 acetyl/propionyl-CoA carboxylase, epsilon subunit K27095 accE5; acyl-CoA carboxylase epsilon subunit
D RAM_08010 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RAM_04655 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAM_04660 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAM_13780 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RAM_33715 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RAM_19555 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RAM_31845 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RAM_36860 6-phosphogluconate dehydrogenase-related protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RAM_15490 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RAM_34045 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RAM_04495 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_36640 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_19525 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_37030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_07100 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_03805 acyl-CoA synthetase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D RAM_06070 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RAM_40715 acetyl/propionyl-CoA carboxylase, biotin carboxylase subunit fused with biotin carboxyl carrier subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D RAM_40720 acetyl/propionyl-CoA carboxylase, carboxyltransferase subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D RAM_34200 enoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D RAM_04965 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RAM_07420 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RAM_01385 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D RAM_16625 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D RAM_08015 putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12985 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_47360 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_41655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_19540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_35680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_17205 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_40565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:amn00290]
D RAM_08300 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAM_41620 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAM_16880 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAM_30110 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RAM_08750 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RAM_08755 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RAM_08615 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D RAM_15345 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAM_08560 acetolactate synthase 1 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAM_13320 acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAM_01730 acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAM_40515 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAM_08565 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RAM_08570 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RAM_08550 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RAM_38555 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RAM_11100 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAM_24205 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAM_08620 putative alpha-isopropylmalate/homocitrate synthase family transferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RAM_45590 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:amn00300]
D RAM_40040 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RAM_45575 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RAM_45570 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RAM_38185 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RAM_46040 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RAM_32310 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RAM_32390 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RAM_05245 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D RAM_30975 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RAM_02155 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D RAM_05255 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RAM_12135 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RAM_20505 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RAM_18455 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RAM_46055 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RAM_26620 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RAM_40045 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RAM_47980 aminotransferase AvtA K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RAM_32090 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RAM_32085 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:amn00310]
D RAM_11050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_35575 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_11540 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RAM_32660 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RAM_33165 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RAM_02780 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_08195 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_40560 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAM_08015 putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12985 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_47360 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_41655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_19540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_35680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_17205 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_40565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_35635 tryptophan 2-monooxygenase K00468 davB; lysine 2-monooxygenase [EC:1.13.12.2]
D RAM_35630 nitrilase K01506 davA; 5-aminopentanamidase [EC:3.5.1.30]
D RAM_39605 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D RAM_06070 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RAM_30345 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_20945 gabD2; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_19560 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_40480 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_12585 gabD2; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_00990 FAD-dependent oxidoreductase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D RAM_37365 acyl-CoA transferase/carnitine dehydratase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D RAM_24100 Lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D RAM_04495 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_36640 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_19525 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_37030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_07100 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:amn00220]
D RAM_30970 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RAM_22495 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RAM_30955 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RAM_24235 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RAM_08945 arginase K01476 rocF; arginase [EC:3.5.3.1]
D RAM_18505 amidinotransferase K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D RAM_02790 amidinotransferase K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D RAM_13390 UreA amidolyase K01941 uca; urea carboxylase [EC:6.3.4.6]
D RAM_13385 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D RAM_43370 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RAM_43375 urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RAM_43380 urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D RAM_00755 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D RAM_21160 nitric-oxide synthase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D RAM_23420 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D RAM_46415 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RAM_13700 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_09170 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_06190 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_06235 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_11710 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_13150 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_35035 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RAM_06825 glutamate dehydrogenase (NAD(P)+) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RAM_25280 glutamate dehydrogenase (NAD(P)+) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RAM_32235 N-acetylglutamate synthase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D RAM_30985 argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D RAM_05210 GCN5-related N-acetyltransferase K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1]
D RAM_30980 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D RAM_30990 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D RAM_30975 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:amn00330]
D RAM_32010 glycine amidinotransferase K00613 GATM; glycine amidinotransferase [EC:2.1.4.1]
D RAM_10105 creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D RAM_42860 creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D RAM_35740 creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D RAM_10130 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RAM_14735 cytosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RAM_40395 N-methylhydantoinase K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D RAM_40390 hydantoinase B/oxoprolinase K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D RAM_38290 arginine/lysine/ornithine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D RAM_21910 arginine/lysine/ornithine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D RAM_28220 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RAM_26245 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RAM_26235 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RAM_26240 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D RAM_40360 adenosylmethionine-8-amino-7-oxononanoate transaminase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D RAM_04495 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_36640 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_19525 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_37030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_07100 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_31850 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-]
D RAM_11060 acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D RAM_47120 GNAT family acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D RAM_17705 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RAM_13325 agmatinase K25365 gbh; guanidinobutyrase / D-arginase [EC:3.5.3.7 3.5.3.10]
D RAM_06195 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_29930 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_41690 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_37905 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_02105 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_21520 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_21160 nitric-oxide synthase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D RAM_18505 amidinotransferase K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D RAM_02790 amidinotransferase K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D RAM_08945 arginase K01476 rocF; arginase [EC:3.5.3.1]
D RAM_13640 ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D RAM_02390 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RAM_13525 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D RAM_34385 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RAM_36295 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D RAM_06120 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D RAM_25285 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D RAM_16455 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
D RAM_13625 D-amino-acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
C 00340 Histidine metabolism [PATH:amn00340]
D RAM_25010 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D RAM_25015 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D RAM_11630 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D RAM_11560 phosphoribosyl isomerase A K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D RAM_11555 glutamine amidotransferase HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D RAM_11620 cyclase HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D RAM_11475 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D RAM_01375 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAM_11470 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAM_36180 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAM_04985 myo-inositol-1(or 4)-monophosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D RAM_23475 histidinol phosphatase of PHP family protein K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D RAM_11465 hisD; bifunctional histidinal dehydrogenase/histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D RAM_06420 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D RAM_12525 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D RAM_06425 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D RAM_06440 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D RAM_04495 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_36640 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_19525 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_37030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_07100 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_17705 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RAM_25255 hypothetical protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
D RAM_25265 hypothetical protein K18912 egtB; gamma-glutamyl hercynylcysteine S-oxide synthase [EC:1.14.99.50]
D RAM_25260 hypothetical protein K07008 egtC; gamma-glutamyl hercynylcysteine S-oxide hydrolase [EC:3.5.1.118]
C 00350 Tyrosine metabolism [PATH:amn00350]
D RAM_01375 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAM_11470 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAM_36180 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAM_41590 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RAM_00795 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D RAM_15120 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D RAM_28170 hypothetical protein K24287 lmbB2; L-tyrosine peroxygenase [EC:1.11.2.6]
D RAM_17705 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RAM_17550 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RAM_17820 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RAM_30345 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_20945 gabD2; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_19560 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_40480 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_12585 gabD2; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_16640 Zn-dependent alcohol dehydrogenase class III K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D RAM_03965 mycothiol-dependent maleylpyruvate isomerase K16163 K16163; maleylpyruvate isomerase [EC:5.2.1.4]
C 00360 Phenylalanine metabolism [PATH:amn00360]
D RAM_17705 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RAM_07930 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D RAM_19465 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D RAM_07935 aromatic compounds degradation protein paaI K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D RAM_07945 paaA; phenylacetate-CoA oxygenase subunit PaaA K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D RAM_07950 phenylacetic acid degradation protein PaaB K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D RAM_07955 phenylacetic acid degradation protein PaaC K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D RAM_07960 phenylacetic acid degradation protein PaaD K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D RAM_07965 phenylacetic acid degradation oxidoreductase K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D RAM_05390 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D RAM_15910 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D RAM_43120 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D RAM_07940 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D RAM_02780 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_08195 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_45845 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RAM_46290 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RAM_37395 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RAM_39790 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RAM_24255 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RAM_20695 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RAM_01375 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAM_11470 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAM_36180 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAM_16640 Zn-dependent alcohol dehydrogenase class III K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D RAM_41590 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RAM_20920 catalase/hydroperoxidase HPI(I) K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D RAM_06195 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_29930 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_41690 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_37905 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_02105 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_21520 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_38855 3-phenylpropionate dioxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D RAM_41075 3-phenylpropionate dioxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D RAM_22320 ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D RAM_02005 ferredoxin--NAD+ reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D RAM_09290 ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D RAM_27265 mhpA; 3-(3-hydroxyphenyl)propionate hydroxylase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D RAM_26760 monooxygenase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D RAM_29140 mhpB; 3-(2,3-dihydroxyphenyl)propionate dioxygenase K05713 mhpB; 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16]
D RAM_29135 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14]
D RAM_44255 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D RAM_21495 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D RAM_21490 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00380 Tryptophan metabolism [PATH:amn00380]
D RAM_35730 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D RAM_32790 kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D RAM_11050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_35575 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_11540 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RAM_32660 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RAM_33165 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RAM_02780 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_08195 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_40560 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAM_08015 putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12985 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_47360 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_41655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_19540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_35680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_17205 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_40565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_17705 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D RAM_04495 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_36640 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_19525 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_37030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_07100 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_06195 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_29930 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_41690 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_37905 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_02105 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_21520 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_20920 catalase/hydroperoxidase HPI(I) K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D RAM_32710 multicopper oxidase type 2 K20219 phsA; o-aminophenol oxidase [EC:1.10.3.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:amn00400]
D RAM_11765 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RAM_12505 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RAM_13905 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RAM_13910 3-dehydroquinate dehydratase II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D RAM_22210 4-hydroxyphenylpyruvate dioxygenase K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118]
D RAM_22205 shikimate 5-dehydrogenase K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24]
D RAM_13900 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RAM_39925 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RAM_13895 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RAM_11665 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RAM_11190 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D RAM_11560 phosphoribosyl isomerase A K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D RAM_11675 trpC; indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D RAM_11685 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RAM_11680 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RAM_35910 tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RAM_04065 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D RAM_05945 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D RAM_01570 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RAM_00920 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D RAM_01375 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAM_11470 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAM_36180 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:amn00410]
D RAM_25625 aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D RAM_44830 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D RAM_45505 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D RAM_00975 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RAM_40485 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RAM_06070 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RAM_03275 aminotransferase class III K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D RAM_04495 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_36640 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_19525 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_37030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_07100 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_44835 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RAM_34095 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RAM_34090 hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D RAM_06430 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RAM_24295 N-carbamoyl-L-amino-acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RAM_02780 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_08195 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_40560 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAM_41510 acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D RAM_15490 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RAM_34045 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:amn00430]
D RAM_45505 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D RAM_00535 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAM_14045 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAM_28180 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAM_45940 taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D RAM_40805 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RAM_03275 aminotransferase class III K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D RAM_35035 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RAM_33725 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RAM_27880 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:amn00450]
D RAM_41635 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RAM_00310 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RAM_42585 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RAM_26370 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAM_25035 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAM_39755 cystathionine gamma-synthase/methionine-gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D RAM_14395 cysteine desulfurase/selenocysteine lyase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D RAM_10930 aminotransferase class V/cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D RAM_07470 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RAM_47960 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RAM_14455 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RAM_34170 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RAM_14460 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RAM_34165 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RAM_26070 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RAM_26060 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D RAM_42375 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:amn00460]
D RAM_08725 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_37935 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_22145 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_38915 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_44210 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_26745 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_37330 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_04785 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_06570 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_20400 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_00430 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_42975 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_41720 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_19650 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_26480 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_12430 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_00535 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAM_14045 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAM_28180 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAM_08800 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RAM_09215 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAM_38815 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAM_44940 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:amn00470]
D RAM_03780 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RAM_08845 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RAM_47985 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RAM_31970 amino acid adenylation domain-containing protein K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D RAM_39605 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D RAM_23420 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D RAM_46415 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RAM_39590 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RAM_32075 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RAM_24430 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D RAM_12135 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RAM_20505 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RAM_18455 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RAM_46055 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RAM_26620 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RAM_40045 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RAM_13625 D-amino-acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
D RAM_13325 agmatinase K25365 gbh; guanidinobutyrase / D-arginase [EC:3.5.3.7 3.5.3.10]
D RAM_16455 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
D RAM_16445 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K22549 lhpC; D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-]
D RAM_16435 FAD-dependent oxidoreductase K21061 lhpB; D-hydroxyproline dehydrogenase subunit beta [EC:1.5.99.-]
D RAM_16440 hypothetical protein K22550 lhpD; D-hydroxyproline dehydrogenase subunit gamma
D RAM_16450 dihydrodipicolinate synthetase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
C 00480 Glutathione metabolism [PATH:amn00480]
D RAM_00535 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAM_14045 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAM_28180 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAM_43050 LamB-like protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D RAM_43055 allophanate hydrolase subunit 1 K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D RAM_12480 carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D RAM_28520 carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D RAM_21890 carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D RAM_21900 carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D RAM_25270 glutamate--cysteine ligase GCS2 K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RAM_37350 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RAM_11080 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RAM_05400 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RAM_34975 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RAM_04255 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RAM_00015 6-phosphogluconate dehydrogenase-like protein K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RAM_02020 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RAM_14260 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RAM_08375 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D RAM_28220 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RAM_26245 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RAM_26235 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:amn00515]
D RAM_42420 glycosyl transferase family protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:amn00514]
D RAM_42420 glycosyl transferase family protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:amn00511]
D RAM_21175 neuraminidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D RAM_23105 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RAM_40230 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RAM_29185 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RAM_23405 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RAM_15915 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RAM_42445 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RAM_34245 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RAM_16855 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RAM_31120 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RAM_25800 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RAM_19070 beta-mannosidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D RAM_15730 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D RAM_07780 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D RAM_26630 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D RAM_16740 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D RAM_20310 large protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D RAM_43025 glucosylceramidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis [PATH:amn00540]
D RAM_01060 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RAM_19330 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RAM_19340 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RAM_21760 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RAM_21755 D-beta-D-heptose 7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
C 00542 O-Antigen repeat unit biosynthesis [PATH:amn00542]
D RAM_39980 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:amn00541]
D RAM_42685 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RAM_02405 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAM_12280 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAM_01020 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAM_25365 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAM_27775 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RAM_01135 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RAM_00530 UDP glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RAM_21740 UDP glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RAM_02950 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAM_27495 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAM_05125 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RAM_21770 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RAM_02875 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RAM_05130 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RAM_02910 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RAM_08095 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RAM_41165 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RAM_04620 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RAM_41180 manB; phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RAM_00585 GDPmannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RAM_01055 aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D RAM_42290 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RAM_03825 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RAM_38065 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RAM_45705 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:amn00550]
D RAM_39915 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RAM_02315 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RAM_32060 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RAM_32075 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RAM_32090 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RAM_08845 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RAM_47985 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RAM_32085 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RAM_33935 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RAM_06125 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RAM_23605 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RAM_33320 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RAM_32080 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RAM_32065 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RAM_32100 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RAM_00265 peptidoglycan glycosyl transferase K05364 pbpA; penicillin-binding protein A
D RAM_04315 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RAM_22380 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RAM_44925 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RAM_44330 UDP-N-acetylmuramyl tripeptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D RAM_44325 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:amn00552]
D RAM_06125 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RAM_23605 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RAM_33320 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RAM_39980 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D RAM_31970 amino acid adenylation domain-containing protein K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D RAM_01025 glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:amn00543]
D RAM_39980 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D RAM_44575 alginate O-acetyltransferase K19294 algI; alginate O-acetyltransferase complex protein AlgI
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:amn00730]
D RAM_43995 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D RAM_44000 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RAM_44010 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RAM_08435 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RAM_44030 glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D RAM_13300 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RAM_44020 thiamine biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D RAM_44035 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RAM_08860 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D RAM_34625 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D RAM_41000 ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RAM_14070 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RAM_03575 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:amn00740]
D RAM_26775 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RAM_16985 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RAM_46635 GTP cyclohydrolase II/3,4-dihydroxy 2-butanone 4-phosphate synthase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RAM_14095 GTP cyclohydrolase II/3,4-dihydroxy 2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RAM_42865 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RAM_14100 riboflavin synthase beta chain K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D RAM_14090 riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D RAM_12785 riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D RAM_32420 riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D RAM_06600 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D RAM_45520 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D RAM_36220 cob(II)yrinic acid a,c-diamide reductase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
C 00750 Vitamin B6 metabolism [PATH:amn00750]
D RAM_00150 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D RAM_43335 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D RAM_41750 putative oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D RAM_34040 oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D RAM_08265 oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D RAM_40495 oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D RAM_15650 oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D RAM_02355 oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D RAM_43430 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RAM_10265 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RAM_23435 pyridoxal-5'-phosphate-dependent protein beta subunit K01733 thrC; threonine synthase [EC:4.2.3.1]
D RAM_34305 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RAM_40035 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RAM_27070 pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D RAM_27025 glutamine amidotransferase involved in pyridoxine biosynthesis K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:amn00760]
D RAM_11330 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RAM_11325 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D RAM_11335 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D RAM_39655 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RAM_04630 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RAM_47130 nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RAM_17530 surE; 5'(3')-nucleotidase/polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RAM_40170 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RAM_43675 NagD protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D RAM_34345 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RAM_05850 NAD+ diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D RAM_06165 NAD+ synthase (glutamine-hydrolysing) K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D RAM_32220 competence damage-inducible protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D RAM_39660 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D RAM_30450 SIR2 family NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D RAM_22870 NAD+ kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RAM_30905 NAD+ kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RAM_13715 soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D RAM_10625 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RAM_10630 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RAM_10635 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D RAM_40455 arylmalonate decarboxylase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D RAM_30345 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_20945 gabD2; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_19560 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_40480 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RAM_12585 gabD2; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:amn00770]
D RAM_15345 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAM_08560 acetolactate synthase 1 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAM_13320 acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAM_01730 acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAM_40515 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RAM_08565 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RAM_08570 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RAM_08550 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RAM_38555 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RAM_06135 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D RAM_23300 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D RAM_33010 ketopantoate reductase ApbA/PanE K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D RAM_37340 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D RAM_44835 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RAM_00910 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D RAM_44825 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D RAM_14015 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RAM_09080 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RAM_31380 coaE; dephospho-CoA kinase/protein folding accessory domain-containing protein K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RAM_18430 holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RAM_43145 4-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D RAM_11100 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAM_24205 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAM_34095 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RAM_34090 hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D RAM_06430 allantoate amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RAM_24295 N-carbamoyl-L-amino-acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RAM_25625 aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D RAM_44830 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D RAM_04495 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_36640 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_19525 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_37030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_07100 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:amn00780]
D RAM_10670 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAM_17790 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAM_20430 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAM_20610 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAM_15980 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_12000 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_01070 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_15285 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_38350 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_47355 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_20600 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_27660 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_27680 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_28820 short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_29125 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_17210 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_17655 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_47835 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_06765 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_19430 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_07280 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_10445 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RAM_11275 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D RAM_11290 dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D RAM_11295 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D RAM_04955 biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:amn00785]
D RAM_11025 lipoyl(octanoyl) transferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D RAM_11000 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D RAM_09220 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D RAM_10640 lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D RAM_11050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_35575 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_10740 aceE; pyruvate dehydrogenase subunit E1 K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RAM_10070 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RAM_11045 2-oxoglutarate dehydrogenase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RAM_40855 kgd; alpha-ketoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D RAM_38900 pyruvate dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RAM_47265 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D RAM_38895 pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RAM_47270 pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D RAM_36570 2-oxoisovalerate dehydrogenase E1 component K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D RAM_38890 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RAM_47275 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D RAM_09200 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RAM_25370 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RAM_09205 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAM_09210 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RAM_25410 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:amn00790]
D RAM_22325 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D RAM_44880 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D RAM_14070 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RAM_07765 phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RAM_34445 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RAM_44870 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D RAM_44865 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D RAM_06870 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RAM_39235 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RAM_37020 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RAM_44875 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RAM_19760 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RAM_20935 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RAM_34460 dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RAM_26775 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RAM_16985 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RAM_46635 GTP cyclohydrolase II/3,4-dihydroxy 2-butanone 4-phosphate synthase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RAM_14095 GTP cyclohydrolase II/3,4-dihydroxy 2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RAM_42865 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RAM_00235 para-aminobenzoate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D RAM_42400 aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D RAM_46260 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D RAM_41320 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RAM_43710 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RAM_43740 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RAM_42680 molybdopterin biosynthesis protein MoeA1 K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RAM_43930 molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RAM_25210 molybdopterin-guanine dinucleotide biosynthesis protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:amn00670]
D RAM_20935 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RAM_04185 methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RAM_09215 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAM_38815 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAM_44940 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RAM_04120 phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RAM_04125 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RAM_14050 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RAM_25660 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RAM_09205 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RAM_26370 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAM_25035 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAM_20930 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RAM_32335 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D RAM_02290 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RAM_38790 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RAM_11840 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RAM_42690 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:amn00860]
D RAM_21065 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAM_02465 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D RAM_02535 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RAM_02870 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RAM_02490 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RAM_02470 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RAM_05720 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D RAM_05745 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D RAM_13435 uroporphyrinogen-III decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RAM_14170 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D RAM_21165 flavodoxin-like protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D RAM_13440 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D RAM_25135 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D RAM_13445 hypothetical protein K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D RAM_02475 uroporphyrin-III C-methyltransferase HemD K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D RAM_25450 uroporphyrin-III C-methyltransferase/precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D RAM_14280 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RAM_14350 cytochrome C oxidase subunit XV assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RAM_36230 precorrin-2 C20-methyltransferase K13540 cobIJ; precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase [EC:2.1.1.130 2.1.1.131]
D RAM_36240 precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D RAM_36205 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D RAM_35395 precorrin 6A synthase K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D RAM_36215 precorrin-6X reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D RAM_36200 precorrin-6Y C5,15-methyltransferase/precorrin-8W decarboxylase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D RAM_36235 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D RAM_36185 hydrogenobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D RAM_36270 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D RAM_39920 diol dehydratase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RAM_36190 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RAM_36145 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RAM_05915 adenosylcobinamide-phosphate synthase CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RAM_36150 adenosylcobinamide-phosphate synthase CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RAM_36155 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D RAM_36165 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D RAM_11105 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D RAM_36160 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D RAM_05960 bifunctional RNase H/acid phosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D RAM_36195 magnesium chelatase subunit ChlD K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D RAM_25115 magnesium chelatase subunit ChlI K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D RAM_43510 heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20]
D RAM_07600 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K23825 K23825; F420H(2)-dependent biliverdin reductase [EC:1.3.98.-]
D RAM_38355 ferritin family protein K22336 bfrB; bacterioferritin B [EC:1.16.3.1]
D RAM_00750 ferritin family protein K22336 bfrB; bacterioferritin B [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:amn00130]
D RAM_02655 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D RAM_43150 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D RAM_02615 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D RAM_17595 O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D RAM_43890 O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D RAM_02605 O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D RAM_02610 naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D RAM_02595 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D RAM_32185 adenosine deaminase K18286 add; aminodeoxyfutalosine deaminase [EC:3.5.4.40]
D RAM_32275 TrpR binding protein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RAM_33405 nucleotide-diphosphate-sugar epimerase/NmrA family protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RAM_15580 nucleotide-diphosphate-sugar epimerase/NmrA family protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RAM_17555 nucleotide-diphosphate-sugar epimerase/NmrA family protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RAM_41590 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:amn00900]
D RAM_13300 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RAM_10335 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RAM_11110 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D RAM_44540 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D RAM_42350 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RAM_44545 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D RAM_10345 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RAM_41385 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RAM_08015 putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12985 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_47360 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_41655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_19540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_35680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_17205 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_40565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_46155 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D RAM_11830 geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RAM_07705 dimethylallyltranstransferase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RAM_20770 polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RAM_41485 undecaprenyl pyrophosphate synthase K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D RAM_33935 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RAM_10220 peptidase M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:amn00909]
D RAM_06720 terpene synthase K10187 cyc2; germacradienol/geosmin synthase [EC:4.2.3.22 4.2.3.75 4.1.99.16]
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:amn00906]
D RAM_11820 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RAM_20760 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RAM_11825 phytoene dehydrogenase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D RAM_20765 phytoene dehydrogenase-related protein K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D RAM_20740 isorenieratene synthase K09879 crtU; carotenoid phi-ring synthase / carotenoid chi-ring synthase [EC:1.3.99.39 1.3.99.40]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:amn00903]
D RAM_04495 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_36640 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_19525 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_37030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_07100 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_45935 limonene-1,2-epoxide hydrolase K10533 E3.3.2.8; limonene-1,2-epoxide hydrolase [EC:3.3.2.8]
C 00907 Pinene, camphor and geraniol degradation [PATH:amn00907]
D RAM_02780 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_08195 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_40560 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAM_14690 short-chain dehydrogenase/reductase K13775 atuG; citronellol/citronellal dehydrogenase
D RAM_27050 acyl-CoA dehydrogenase K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-]
D RAM_04965 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RAM_07420 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RAM_13370 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAM_36930 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAM_19635 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAM_23485 acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures [PATH:amn01052]
D RAM_24215 acyl-CoA dehydrogenase K16026 asm15; methoxymalonate biosynthesis protein
D RAM_24210 FkbH-like protein K16027 asm16; methoxymalonate biosynthesis protein
D RAM_03180 N-acetyltransferase/amide synthase K15466 rifF; amide synthase
D RAM_03155 rifamycin polyketide synthase K15670 rifA; rifamycin polyketide synthase modules 1, 2 and 3 [EC:6.2.1.74]
D RAM_03160 rifamycin polyketide synthase K15671 rifB; rifamycin polyketide synthase modules 4, 5 and 6
D RAM_03165 rifamycin polyketide synthase K15672 rifC_D; rifamycin polyketide synthase modules 7 and 8
D RAM_03170 rifamycin polyketide synthase K15672 rifC_D; rifamycin polyketide synthase modules 7 and 8
D RAM_03175 rifamycin polyketide synthase K15673 rifE; rifamycin polyketide synthase modules 9 and 10
D RAM_03300 mhpA; 3-(3-hydroxyphenyl)propionate hydroxylase K16022 rif19; flavoprotein hydroxylase
D RAM_03305 acyltransferase PapA5 K16023 rif20; acetyltransferase
D RAM_03320 methyltransferase type 11 K15467 rif14; 27-O-demethylrifamycin SV methyltransferase [EC:2.1.1.315]
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins [PATH:amn01051]
D RAM_03210 oxidoreductase RifL K16015 rifL; oxidoreductase [EC:1.1.1.-]
D RAM_03205 AHBA synthase K16016 rifK; 3-amino-5-hydroxybenzoate synthase [EC:4.2.1.144 2.6.1.-]
D RAM_03215 phosphoglycolate phosphatase K16017 rifM; AHBA synthesis associated protein
D RAM_03220 kanosamine kinase K16018 rifN; kanosamine 6-kinase [EC:2.7.1.179]
D RAM_03325 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RAM_03330 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RAM_14275 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RAM_11520 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RAM_11525 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RAM_03195 phospho-2-dehydro-3-deoxyheptonate aldolase K16019 rifH; 3,4-Dideoxy-4-amino-D-arabino-heptulosonate 7-phosphate synthase
D RAM_03190 aminodehydroquinate synthase K16020 rifG; 5-deoxy-5-amino-3-dehydroquinate synthase
D RAM_03340 3-dehydroquinate dehydratase K16021 rifJ; 5-deoxy-5-amino-3-dehydroquinate dehydratase
D RAM_03155 rifamycin polyketide synthase K15670 rifA; rifamycin polyketide synthase modules 1, 2 and 3 [EC:6.2.1.74]
D RAM_03160 rifamycin polyketide synthase K15671 rifB; rifamycin polyketide synthase modules 4, 5 and 6
D RAM_03165 rifamycin polyketide synthase K15672 rifC_D; rifamycin polyketide synthase modules 7 and 8
D RAM_03170 rifamycin polyketide synthase K15672 rifC_D; rifamycin polyketide synthase modules 7 and 8
D RAM_03175 rifamycin polyketide synthase K15673 rifE; rifamycin polyketide synthase modules 9 and 10
D RAM_03300 mhpA; 3-(3-hydroxyphenyl)propionate hydroxylase K16022 rif19; flavoprotein hydroxylase
D RAM_03180 N-acetyltransferase/amide synthase K15466 rifF; amide synthase
D RAM_03305 acyltransferase PapA5 K16023 rif20; acetyltransferase
D RAM_03320 methyltransferase type 11 K15467 rif14; 27-O-demethylrifamycin SV methyltransferase [EC:2.1.1.315]
D RAM_24215 acyl-CoA dehydrogenase K16026 asm15; methoxymalonate biosynthesis protein
D RAM_24210 FkbH-like protein K16027 asm16; methoxymalonate biosynthesis protein
C 01059 Biosynthesis of enediyne antibiotics [PATH:amn01059]
D RAM_35220 type I polyketide synthase K15314 sgcE; enediyne polyketide synthase
D RAM_35215 hypothetical protein K15315 sgcE10; enediyne core biosynthesis thioesterase
D RAM_22080 microsomal epoxide hydrolase K21159 sgcF; epoxide hydrolase
D RAM_21955 epocide hydrolase domain-containing protein K21159 sgcF; epoxide hydrolase
D RAM_35150 microsomal epoxide hydrolase K21159 sgcF; epoxide hydrolase
D RAM_16160 microsomal epoxide hydrolase K21159 sgcF; epoxide hydrolase
D RAM_31870 microsomal epoxide hydrolase K21159 sgcF; epoxide hydrolase
D RAM_28275 epoxide hydrolase K21159 sgcF; epoxide hydrolase
D RAM_20055 epoxide hydrolase K21159 sgcF; epoxide hydrolase
D RAM_35265 hypothetical protein K21160 sgcE2; enediyne biosynthesis protein E2
D RAM_35260 enediyne biosynthesis protein K21161 sgcE3; enediyne biosynthesis protein E3
D RAM_35255 ASPIC/UnbV domain-containing protein K21162 sgcE4; enediyne biosynthesis protein E4
D RAM_35250 hypothetical protein K21163 sgcE5; enediyne biosynthesis protein E5
D RAM_35245 cytochrome P450 K21164 sgcE7; enediyne biosynthesis protein E7
D RAM_35240 hypothetical protein K21165 sgcE8; enediyne biosynthesis protein E8
D RAM_35235 oxidoreductase K21166 sgcE9; enediyne biosynthesis protein E9
D RAM_35225 wyosine base formation K21167 sgcE11; enediyne biosynthesis protein E11
D RAM_35210 oxidoreductase K21185 sgcE6; flavin reductase
D RAM_35080 aminotransferase class III K21188 mdpC7; PLP-dependent transaminase
D RAM_37725 cytochrome P450 K20420 ncsB3; 2-hydroxy-5-methyl-1-naphthoate 7-hydroxylase [EC:1.14.15.31]
D RAM_16420 O-methyltransferase-related protein K20421 ncsB1; 2,7-dihydroxy-5-methyl-1-naphthoate 7-O-methyltransferase [EC:2.1.1.303]
C 01056 Biosynthesis of type II polyketide backbone [PATH:amn01056]
D RAM_27705 3-oxoacyl-[acyl-carrier-protein] synthase II K05551 actI1; minimal PKS ketosynthase (KS/KS alpha) [EC:2.3.1.- 2.3.1.260 2.3.1.235]
D RAM_27700 3-oxoacyl-[acyl-carrier-protein] synthase II K05552 actI2; minimal PKS chain-length factor (CLF/KS beta) [EC:2.3.1.- 2.3.1.260 2.3.1.235]
D RAM_27695 3-oxoacyl-ACP synthase acylcarrier protein K05553 actI3; minimal PKS acyl carrier protein
C 01057 Biosynthesis of type II polyketide products [PATH:amn01057]
D RAM_06935 beta-lactamase class B K05555 actIV; cyclase [EC:4.-.-.-]
D RAM_02025 beta-lactamase class B K05555 actIV; cyclase [EC:4.-.-.-]
D RAM_32655 hydroxylacyl-CoA dehydrogenase K05556 actVI1; ketoreductase RED1 [EC:1.1.1.-]
D RAM_34190 cyclase-dehydratase K14627 actVI3; dehydratase [EC:4.2.1.-]
C 00253 Tetracycline biosynthesis
D RAM_27705 3-oxoacyl-[acyl-carrier-protein] synthase II K05551 actI1; minimal PKS ketosynthase (KS/KS alpha) [EC:2.3.1.- 2.3.1.260 2.3.1.235]
D RAM_27700 3-oxoacyl-[acyl-carrier-protein] synthase II K05552 actI2; minimal PKS chain-length factor (CLF/KS beta) [EC:2.3.1.- 2.3.1.260 2.3.1.235]
D RAM_27695 3-oxoacyl-ACP synthase acylcarrier protein K05553 actI3; minimal PKS acyl carrier protein
C 00523 Polyketide sugar unit biosynthesis [PATH:amn00523]
D RAM_02950 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAM_27495 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAM_05125 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RAM_21770 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RAM_02875 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RAM_05130 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RAM_27780 UDP-glucose 4-epimerase K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25]
D RAM_42720 UDP-glucose 4-epimerase K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25]
D RAM_27540 NDP-hexose 23-dehydratase K16435 evaA; dTDP-4-dehydro-6-deoxy-alpha-D-glucopyranose 2,3-dehydratase [EC:4.2.1.159]
D RAM_03295 NDP-hexose 2,3-dehydratase K16435 evaA; dTDP-4-dehydro-6-deoxy-alpha-D-glucopyranose 2,3-dehydratase [EC:4.2.1.159]
D RAM_40920 dTDP-4-dehydrorhamnose 3,5-epimerase K16438 evaD; 5-epimerase [EC:5.1.3.-]
D RAM_03280 oxidoreductase K13327 spnN; dTDP-3,4-didehydro-2,6-dideoxy-alpha-D-glucose 3-reductase [EC:1.1.1.384]
D RAM_27765 oxidoreductase domain-containing protein K13327 spnN; dTDP-3,4-didehydro-2,6-dideoxy-alpha-D-glucose 3-reductase [EC:1.1.1.384]
D RAM_27630 lipopolysaccharide biosynthesis protein RfbH K13328 spnQ; dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:4.2.1.164]
D RAM_03260 lipopolysaccharide biosynthesis protein RfbH K13328 spnQ; dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:4.2.1.164]
C 01054 Nonribosomal peptide structures [PATH:amn01054]
D RAM_24430 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D RAM_43150 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:amn01055]
D RAM_04555 (S)-2-hydroxy-acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D RAM_05125 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RAM_21770 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RAM_27540 NDP-hexose 23-dehydratase K16435 evaA; dTDP-4-dehydro-6-deoxy-alpha-D-glucopyranose 2,3-dehydratase [EC:4.2.1.159]
D RAM_03295 NDP-hexose 2,3-dehydratase K16435 evaA; dTDP-4-dehydro-6-deoxy-alpha-D-glucopyranose 2,3-dehydratase [EC:4.2.1.159]
D RAM_40920 dTDP-4-dehydrorhamnose 3,5-epimerase K16438 evaD; 5-epimerase [EC:5.1.3.-]
D RAM_20165 glycosyl transferase K16444 gtfB; vancomycin aglycone glucosyltransferase [EC:2.4.1.310]
D RAM_28035 glycosyl transferase K16444 gtfB; vancomycin aglycone glucosyltransferase [EC:2.4.1.310]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:amn00946]
D RAM_08725 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_37935 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_22145 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_38915 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_44210 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_26745 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_37330 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_04785 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_06570 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_20400 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_00430 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_42975 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_41720 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_19650 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_26480 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_12430 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_26020 rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D RAM_29495 alpha-L-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D RAM_29575 rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D RAM_18645 hydrolase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
D RAM_09770 urate oxidase K00365 uaZ; urate oxidase [EC:1.7.3.3]
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:amn00311]
D RAM_13625 D-amino-acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3]
D RAM_17605 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RAM_35715 beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RAM_26100 beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RAM_26090 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:amn00332]
D RAM_34385 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RAM_36295 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:amn00261]
D RAM_04555 (S)-2-hydroxy-acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D RAM_15780 MbtH protein K05375 mbtH; MbtH protein
D RAM_20570 MbtH protein K05375 mbtH; MbtH protein
D RAM_31990 MbtH protein K05375 mbtH; MbtH protein
D RAM_25615 MbtH protein K05375 mbtH; MbtH protein
D RAM_24270 MbtH protein K05375 mbtH; MbtH protein
D RAM_24400 MbtH protein K05375 mbtH; MbtH protein
D RAM_14455 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RAM_34170 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RAM_14460 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RAM_34165 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RAM_45575 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RAM_45570 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RAM_38185 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RAM_46040 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RAM_32310 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RAM_32390 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:amn00521]
D RAM_36125 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RAM_12465 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RAM_47610 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D RAM_02630 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RAM_13225 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RAM_42855 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RAM_20665 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RAM_09590 myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D RAM_02950 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAM_27495 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAM_05125 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RAM_21770 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RAM_02875 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RAM_05130 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D RAM_36125 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RAM_12465 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:amn00525]
D RAM_02950 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAM_27495 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RAM_05125 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RAM_21770 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:amn00401]
D RAM_01570 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RAM_01375 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAM_11470 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAM_36180 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
D RAM_40920 dTDP-4-dehydrorhamnose 3,5-epimerase K16438 evaD; 5-epimerase [EC:5.1.3.-]
C 00405 Phenazine biosynthesis
D RAM_11665 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D RAM_10685 [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RAM_15980 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_12000 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_01070 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_15285 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_38350 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_47355 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_20600 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_27660 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_27680 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_28820 short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_29125 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_17210 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_17655 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_47835 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_06765 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_19430 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_07280 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:amn00998]
D RAM_10675 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D RAM_17785 acyl carrier protein K02078 acpP; acyl carrier protein
D RAM_20425 acyl carrier protein K02078 acpP; acyl carrier protein
D RAM_20540 acyl carrier protein K02078 acpP; acyl carrier protein
D RAM_20615 acyl carrier protein K02078 acpP; acyl carrier protein
D RAM_18450 acyl carrier protein K02078 acpP; acyl carrier protein
D RAM_23450 acyl carrier protein K02078 acpP; acyl carrier protein
D RAM_21290 acyl carrier protein K02078 acpP; acyl carrier protein
D RAM_20585 cysteine synthase K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
D RAM_20555 cysteine synthase K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
D RAM_24410 cysteine synthase K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
D RAM_31945 cysteine synthase K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
C 00999 Biosynthesis of various plant secondary metabolites [PATH:amn00999]
D RAM_14020 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RAM_08725 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_37935 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_22145 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_38915 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_44210 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_26745 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_37330 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_04785 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_06570 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_20400 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D RAM_00430 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_42975 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_41720 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_19650 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_26480 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RAM_12430 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
D RAM_20585 cysteine synthase K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
D RAM_20555 cysteine synthase K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
D RAM_24410 cysteine synthase K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
D RAM_31945 cysteine synthase K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:amn00362]
D RAM_25825 mandelate racemase/muconate lactonizing enzyme K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D RAM_09450 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D RAM_37300 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D RAM_37310 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D RAM_13370 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAM_36930 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAM_19635 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAM_23485 acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAM_37575 glyoxalase/bleomycin resistance protein/dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2]
D RAM_44255 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D RAM_21495 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D RAM_21490 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D RAM_45450 4-oxalocrotonate tautomerase protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RAM_44250 decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77]
D RAM_24710 catechol 1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D RAM_09445 protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D RAM_09440 protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D RAM_01625 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D RAM_09455 carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RAM_36695 carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RAM_26400 carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RAM_18920 carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RAM_37360 carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RAM_44435 carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RAM_31365 hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RAM_06555 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D RAM_02010 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D RAM_38940 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D RAM_37055 short-chain dehydrogenase/reductase SDR K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D RAM_36690 short-chain dehydrogenase/reductase SDR K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D RAM_19665 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D RAM_19445 short-chain dehydrogenase K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D RAM_40560 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RAM_11540 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RAM_32660 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RAM_33165 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RAM_02780 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_08195 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_45845 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RAM_46290 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RAM_37395 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RAM_39790 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RAM_24255 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RAM_20695 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RAM_08015 putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12985 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_47360 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_41655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_19540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_35680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_17205 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_40565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_44190 benzoyl-CoA oxygenase component B K15512 boxB; benzoyl-CoA 2,3-epoxidase subunit B [EC:1.14.13.208]
D RAM_44195 benzoyl-CoA-dihydrodiol lyase K15513 boxC; benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44]
C 00627 Aminobenzoate degradation [PATH:amn00627]
D RAM_22875 flavin binding monooxygenase K10215 ethA; monooxygenase [EC:1.14.13.-]
D RAM_30615 monooxygenase flavin-binding family protein K10215 ethA; monooxygenase [EC:1.14.13.-]
D RAM_06195 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_29930 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_41690 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_37905 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_02105 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_21520 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_09650 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RAM_43815 benzoylformate decarboxylase K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7]
D RAM_33675 NAD-dependent aldehyde/benzaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D RAM_17085 acetyl-CoA synthetase K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32]
D RAM_42960 salicylyl-CoA 5-hydroxylase K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40]
D RAM_02780 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_08195 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:amn00364]
D RAM_01380 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAM_46980 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAM_25505 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAM_23685 dienelactone hydrolase family hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAM_35915 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAM_25825 mandelate racemase/muconate lactonizing enzyme K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
C 00625 Chloroalkane and chloroalkene degradation [PATH:amn00625]
D RAM_00970 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D RAM_32800 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D RAM_17550 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RAM_17820 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RAM_04495 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_36640 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_19525 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_37030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_07100 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RAM_33650 threonine dehydrogenase and related Zn-dependent dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D RAM_02085 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D RAM_19385 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D RAM_02275 2-haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D RAM_28665 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D RAM_23525 HAD family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:amn00361]
D RAM_00970 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D RAM_32800 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D RAM_01380 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAM_46980 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAM_25505 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAM_23685 dienelactone hydrolase family hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAM_35915 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAM_24710 catechol 1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D RAM_30725 FAD-dependent oxidoreductase K10676 tfdB; 2,4-dichlorophenol 6-monooxygenase [EC:1.14.13.20]
D RAM_25825 mandelate racemase/muconate lactonizing enzyme K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D RAM_37575 glyoxalase/bleomycin resistance protein/dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2]
D RAM_02275 2-haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D RAM_28665 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D RAM_23525 HAD family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D RAM_02085 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D RAM_19385 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00623 Toluene degradation [PATH:amn00623]
D RAM_16640 Zn-dependent alcohol dehydrogenase class III K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D RAM_33675 NAD-dependent aldehyde/benzaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D RAM_25825 mandelate racemase/muconate lactonizing enzyme K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D RAM_01380 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAM_46980 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAM_25505 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAM_23685 dienelactone hydrolase family hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RAM_35915 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:amn00622]
D RAM_16640 Zn-dependent alcohol dehydrogenase class III K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D RAM_33675 NAD-dependent aldehyde/benzaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D RAM_37575 glyoxalase/bleomycin resistance protein/dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2]
D RAM_45450 4-oxalocrotonate tautomerase protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RAM_44250 decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77]
D RAM_44255 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D RAM_21495 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D RAM_21490 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00633 Nitrotoluene degradation [PATH:amn00633]
D RAM_04920 N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D RAM_19320 hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D RAM_19250 hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D RAM_19325 hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
D RAM_13370 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAM_36930 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAM_19635 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RAM_23485 acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:amn00643]
D RAM_00795 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D RAM_15120 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D RAM_06195 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_29930 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_41690 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_37905 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_02105 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_21520 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RAM_37575 glyoxalase/bleomycin resistance protein/dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2]
D RAM_09425 glutaconate CoA-transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D RAM_09430 glutaconate CoA-transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
C 00791 Atrazine degradation [PATH:amn00791]
D RAM_13385 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D RAM_13390 UreA amidolyase K01941 uca; urea carboxylase [EC:6.3.4.6]
D RAM_43370 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RAM_43375 urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RAM_43380 urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:amn00930]
D RAM_32810 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D RAM_09145 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RAM_19920 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RAM_30625 NAD-dependent aldehyde dehydrogenase K14519 aldH; NADP-dependent aldehyde dehydrogenase [EC:1.2.1.4]
D RAM_10920 acyl-CoA dehydrogenase K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-]
D RAM_02780 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_08195 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RAM_40560 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation [PATH:amn00621]
D RAM_45450 4-oxalocrotonate tautomerase protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D RAM_44250 decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77]
D RAM_44255 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D RAM_21495 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D RAM_21490 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00626 Naphthalene degradation [PATH:amn00626]
D RAM_17550 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D RAM_17820 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D RAM_09445 protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D RAM_09440 protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:amn00984]
D RAM_03960 cholesterol oxidase K03333 choD; cholesterol oxidase [EC:1.1.3.6]
D RAM_07885 cholesterol oxidase K03333 choD; cholesterol oxidase [EC:1.1.3.6]
D RAM_38570 cholesterol oxidase K03333 choD; cholesterol oxidase [EC:1.1.3.6]
D RAM_12965 cytochrome P450 K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29]
D RAM_12810 3-ketosteroid-delta-1-dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
D RAM_36890 3-oxosteroid 1-dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
D RAM_06815 3-ketosteroid-delta-1-dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
D RAM_12805 rieske (2Fe-2S) domain-containing protein K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30]
D RAM_12795 oxidoreductase K15983 kshB; 3-ketosteroid 9alpha-monooxygenase subunit B [EC:1.14.15.30]
D RAM_12820 acyl-CoA dehydrogenase K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12]
D RAM_36910 hydroxylase K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12]
D RAM_12835 flavin reductase domain-containing protein K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-]
D RAM_36915 monooxygenase K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-]
D RAM_12830 3,4-DHSA dioxygenase K16049 hsaC; 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase [EC:1.13.11.25]
D RAM_12825 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase K16050 hsaD; 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase [EC:3.7.1.17]
D RAM_36905 alpha/beta hydrolase K16050 hsaD; 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase [EC:3.7.1.17]
D RAM_17220 acyl-CoA synthetase K18687 fadD3; HIP---CoA ligase [EC:6.2.1.41]
D RAM_34920 hypothetical protein K01822 E5.3.3.1; steroid Delta-isomerase [EC:5.3.3.1]
D RAM_12815 hypothetical protein K16051 tesI; 3-oxo-5alpha-steroid 4-dehydrogenase [EC:1.3.99.5]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:amn03020]
D RAM_03350 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RAM_03355 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RAM_03615 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RAM_14010 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D RAM_43870 DNA excision repair protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:amn03010]
D RAM_31405 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RAM_10010 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RAM_03490 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RAM_03610 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RAM_03545 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RAM_47670 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RAM_03440 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RAM_03530 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RAM_03710 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RAM_03455 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RAM_03605 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RAM_03435 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RAM_03595 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RAM_03525 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RAM_25465 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RAM_32405 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RAM_09930 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RAM_03505 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RAM_47680 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RAM_03480 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RAM_34295 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RAM_03050 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RAM_03475 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RAM_03460 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RAM_03465 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RAM_03520 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RAM_03535 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RAM_03070 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RAM_47685 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RAM_03065 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RAM_03045 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RAM_44945 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RAM_03705 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RAM_03510 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RAM_03555 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RAM_03495 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RAM_03620 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RAM_03540 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RAM_09955 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RAM_31040 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RAM_34400 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RAM_03485 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RAM_03470 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RAM_03515 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RAM_42315 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D RAM_34395 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RAM_08890 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RAM_03500 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RAM_03550 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RAM_25480 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D RAM_40020 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RAM_09110 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RAM_25485 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RAM_03000 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RAM_25470 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RAM_48025 hypothetical protein K02914 RP-L34; large subunit ribosomal protein L34
D RAM_31045 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RAM_03590 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RAM_30600 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RAM_r48148 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAM_r48150 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAM_r48144 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAM_r48146 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAM_r48156 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAM_r48158 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAM_r48154 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAM_r48152 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAM_r48136 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAM_r48140 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAM_r48138 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAM_r48142 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:amn00970]
D RAM_t48118 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAM_t48034 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAM_t48066 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAM_t48120 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAM_t48044 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAM_t48122 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAM_t48104 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAM_t48112 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAM_t48098 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RAM_t48050 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RAM_t48086 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RAM_t48068 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RAM_t48116 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RAM_t48048 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RAM_t48070 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RAM_t48100 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RAM_t48038 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RAM_t48084 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RAM_t48134 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RAM_t48106 tRNA-His K14226 tRNA-His; tRNA His
D RAM_t48032 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RAM_t48092 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAM_t48114 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAM_t48036 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAM_t48110 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAM_t48090 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAM_t48046 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RAM_t48108 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RAM_t48062 tRNA-Met K14230 tRNA-Met; tRNA Met
D RAM_t48064 tRNA-Met K14230 tRNA-Met; tRNA Met
D RAM_t48058 tRNA-Met K14230 tRNA-Met; tRNA Met
D RAM_t48094 tRNA-Met K14230 tRNA-Met; tRNA Met
D RAM_t48052 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RAM_t48102 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RAM_t48078 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RAM_t48128 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RAM_t48130 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAM_t48040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAM_t48042 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAM_t48132 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAM_t48124 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RAM_t48126 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RAM_t48056 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RAM_t48060 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RAM_t48054 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RAM_t48096 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RAM_t48074 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAM_t48072 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAM_t48082 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAM_t48076 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAM_t48088 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAM_t48080 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D RAM_21065 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAM_00370 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RAM_08500 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RAM_40445 putative amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RAM_08505 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RAM_08495 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RAM_13795 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RAM_13735 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RAM_06755 aspC; aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D RAM_24185 asparagine synthetase A K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RAM_33885 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RAM_46005 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RAM_27135 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RAM_00980 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RAM_26060 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D RAM_44565 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RAM_42375 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RAM_14050 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RAM_25660 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RAM_12140 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RAM_34490 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RAM_47840 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RAM_15070 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RAM_01390 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RAM_06140 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RAM_44815 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RAM_34360 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RAM_40050 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RAM_10545 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RAM_04585 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RAM_25585 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RAM_31025 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RAM_31020 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RAM_30930 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RAM_04290 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RAM_41270 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:amn03060]
D RAM_03570 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RAM_03035 preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D RAM_14235 preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D RAM_26985 preprotein translocase SecD subunit K03072 secD; preprotein translocase subunit SecD
D RAM_26980 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RAM_26990 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D RAM_48015 preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAM_39405 preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAM_06170 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RAM_41045 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RAM_09910 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RAM_09675 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RAM_12455 arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RAM_24850 sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D RAM_05440 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D RAM_24845 sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D RAM_14420 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RAM_09960 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RAM_28105 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RAM_41835 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RAM_20075 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RAM_15100 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:amn04122]
D RAM_08435 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RAM_12295 rhodanese-like protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RAM_46225 rhodanese-like protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RAM_08440 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RAM_43710 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RAM_10200 ThiS/MoaD family protein K03636 moaD; sulfur-carrier protein
D RAM_39625 ThiS/MoaD family protein K03636 moaD; sulfur-carrier protein
D RAM_43715 ThiS/MoaD family protein K03636 moaD; sulfur-carrier protein
D RAM_05685 molybdopterin biosynthesis-like protein MoeZ K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D RAM_43740 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RAM_44025 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D RAM_39620 cysteine synthase K21148 cysM; [CysO sulfur-carrier protein]-thiocarboxylate-dependent cysteine synthase [EC:2.5.1.113]
D RAM_39630 Mov34/MPN/PAD-1 family protein K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6]
C 03050 Proteasome [PATH:amn03050]
D RAM_24965 vesicle-fusing ATPase K13527 mpa; proteasome-associated ATPase
D RAM_24905 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D RAM_24910 proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C 03018 RNA degradation [PATH:amn03018]
D RAM_34405 ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D RAM_41830 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAM_42110 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAM_32400 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RAM_15275 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RAM_34350 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RAM_21345 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RAM_40025 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RAM_30150 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RAM_32305 mRNA degradation ribonucleases J1/J2 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RAM_47010 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RAM_32940 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RAM_26330 chaperone protein DnaK-like protein K04043 dnaK; molecular chaperone DnaK
D RAM_03890 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAM_22050 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAM_34940 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAM_43905 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAM_08775 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RAM_47920 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:amn03030]
D RAM_00870 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAM_11235 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAM_10970 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RAM_45750 DNA polymerase III subunits gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RAM_45090 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RAM_34300 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RAM_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAM_45335 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAM_47710 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RAM_33795 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RAM_15370 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_01835 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_31570 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_47675 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_31225 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RAM_05960 bifunctional RNase H/acid phosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D RAM_09965 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RAM_31460 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAM_08480 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RAM_16125 DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:amn03410]
D RAM_45305 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RAM_08880 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RAM_44655 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RAM_30935 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D RAM_00660 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RAM_09125 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RAM_35975 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RAM_32180 endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D RAM_34945 endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D RAM_36310 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RAM_25025 adenosine deaminase/DNA-3-methyladenine glycosylase/8-oxoguanine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RAM_41355 adenosine deaminase/DNA-3-methyladenine glycosylase/8-oxoguanine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RAM_05385 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RAM_47155 TDG/mug DNA glycosylase family protein K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D RAM_26500 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RAM_42045 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RAM_14110 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RAM_04280 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RAM_47650 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RAM_31460 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAM_08480 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RAM_16125 DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:amn03420]
D RAM_42210 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RAM_31180 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RAM_31355 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RAM_14120 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RAM_04075 DNA helicase II/ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RAM_05760 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RAM_06255 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RAM_31460 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAM_08480 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RAM_16125 DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RAM_43870 DNA excision repair protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:amn03430]
D RAM_04075 DNA helicase II/ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RAM_05760 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RAM_06255 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RAM_41395 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RAM_41405 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RAM_15370 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_01835 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_31570 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_47675 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_10970 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RAM_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAM_45335 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAM_45750 DNA polymerase III subunits gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RAM_34300 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RAM_45090 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RAM_00870 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAM_11235 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAM_08480 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RAM_16125 DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:amn03440]
D RAM_15370 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_01835 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_31570 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_47675 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_00020 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF
D RAM_33940 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RAM_45715 recR; recombination protein RecR K06187 recR; recombination protein RecR
D RAM_11920 recombination protein RecA K03553 recA; recombination protein RecA
D RAM_31460 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAM_27000 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RAM_26995 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RAM_27005 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RAM_08900 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RAM_10970 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RAM_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAM_45335 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAM_45750 DNA polymerase III subunits gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RAM_34300 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RAM_45090 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RAM_00870 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAM_11235 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAM_14025 primosomal protein N'/primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:amn03450]
D RAM_09895 DNA end-binding protein Ku K10979 ku; DNA end-binding protein Ku
D RAM_26515 DNA end-binding protein Ku K10979 ku; DNA end-binding protein Ku
D RAM_26825 DNA end-binding protein Ku K10979 ku; DNA end-binding protein Ku
D RAM_21335 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RAM_26505 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RAM_26870 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RAM_16560 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RAM_21375 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RAM_42900 ATP-dependent DNA ligase/DNA primase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:amn03250]
D RAM_00175 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:amn02010]
D RAM_25565 sulfonate/nitrate/taurine ABC transporter periplasmic protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAM_01310 sulfonate/nitrate/taurine ABC transporter periplasmic protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAM_07825 sulfonate/nitrate/taurine ABC transporter periplasmic protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAM_25575 sulfonate/nitrate/taurine ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D RAM_07835 sulfonate/nitrate/taurine ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D RAM_01305 sulfonate/nitrate/taurine ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D RAM_25570 nitrate/sulfonate/bicarbonate ABC transporter ATPase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RAM_07830 sulfonate/nitrate/taurine ABC transporter ATPase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RAM_01300 sulfonate/nitrate/taurine ABC transporter ATPase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RAM_43695 molybdate ABC transporter periplasmic protein K02020 modA; molybdate transport system substrate-binding protein
D RAM_43690 molbdate ABC transporter permease K02018 modB; molybdate transport system permease protein
D RAM_43685 ABC transport system ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RAM_41315 thiamine ABC transporter periplasmic protein K02064 thiB; thiamine transport system substrate-binding protein
D RAM_41310 ABC-type Fe3+ transport system, permease component K02063 thiP; thiamine transport system permease protein
D RAM_41305 spermidine/putrescine ABC transporter ATPase K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D RAM_02250 glycine/betaine ABC transporter periplasmic protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D RAM_00500 glycine/betaine ABC transporter periplasmic protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D RAM_40890 glycine/betaine ABC transporter periplasmic protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D RAM_02240 proline/glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RAM_02245 proline/glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RAM_00485 proline/glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RAM_00495 proline/glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RAM_40895 glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RAM_40900 glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RAM_00490 proline/glycine/betaine ABC transporter ATPase K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RAM_40905 glycine/betaine ABC transporter ATPase K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RAM_03775 sugar ABC transporter ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAM_05505 sugar ABC transporter ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAM_22960 sugar ABC transporter periplasmic protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RAM_29490 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RAM_25675 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RAM_22965 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RAM_29505 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RAM_29500 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RAM_22970 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RAM_25685 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RAM_04445 sugar ABC transporter periplasmic protein K10227 smoE; polyol transport system substrate-binding protein
D RAM_04450 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein
D RAM_04455 sugar ABC transporter permease K10229 smoG; polyol transport system permease protein
D RAM_29995 ABC transporter substrate-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein
D RAM_05490 sugar ABC transporter periplasmic protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D RAM_05495 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D RAM_05500 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D RAM_12415 ABC transporter substrate-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D RAM_26440 sugar ABC transporter periplasmic protein K10240 cebE; cellobiose transport system substrate-binding protein
D RAM_26465 sugar ABC transporter periplasmic protein K10240 cebE; cellobiose transport system substrate-binding protein
D RAM_41735 sugar ABC transporter periplasmic protein K10240 cebE; cellobiose transport system substrate-binding protein
D RAM_12420 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D RAM_26470 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D RAM_41730 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D RAM_12425 sugar ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D RAM_26475 sugar ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D RAM_41725 sugar ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D RAM_22215 sugar ABC transporter periplasmic protein K17329 dasA; N,N'-diacetylchitobiose transport system substrate-binding protein
D RAM_16870 ABC transporter substrate-binding protein K17329 dasA; N,N'-diacetylchitobiose transport system substrate-binding protein
D RAM_31105 ABC transporter substrate-binding protein K17329 dasA; N,N'-diacetylchitobiose transport system substrate-binding protein
D RAM_31110 sugar ABC transporter permease K17330 dasB; N,N'-diacetylchitobiose transport system permease protein
D RAM_22220 sugar ABC transporter permease K17330 dasB; N,N'-diacetylchitobiose transport system permease protein
D RAM_16865 sugar ABC transporter permease K17330 dasB; N,N'-diacetylchitobiose transport system permease protein
D RAM_31115 sugar ABC transporter permease K17331 dasC; N,N'-diacetylchitobiose transport system permease protein
D RAM_16860 sugar ABC transporter permease K17331 dasC; N,N'-diacetylchitobiose transport system permease protein
D RAM_22225 sugar ABC transporter permease K17331 dasC; N,N'-diacetylchitobiose transport system permease protein
D RAM_22435 sugar ABC transporter periplasmic protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D RAM_22445 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D RAM_22440 sugar ABC transporter ATPase K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAM_03115 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_03095 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_03100 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_03110 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_09005 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_09010 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_09020 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_09025 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_12355 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_12360 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_12370 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_12375 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_39115 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_39120 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_39130 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_39135 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_09015 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_09030 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_39125 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_39140 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_03105 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_12350 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_12365 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_03090 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_03080 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAM_03085 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAM_09035 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAM_09040 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAM_12345 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAM_39145 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAM_39150 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAM_12340 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAM_03075 ABC transport system ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RAM_04365 ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RAM_04375 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RAM_04380 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RAM_04370 sugar ABC transporter ATPase K23537 nupA; general nucleoside transport system ATP-binding protein
D RAM_08080 sugar ABC transporter periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D RAM_09325 sugar ABC transporter periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D RAM_20275 sugar ABC transporter periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D RAM_15710 sugar ABC transporter periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D RAM_08085 sugar ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RAM_20270 sugar ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RAM_07695 L-arabinose ABC transporter periplasmic protein K10537 araF; L-arabinose transport system substrate-binding protein
D RAM_07685 L-arabinose ABC transporter permease K10538 araH; L-arabinose transport system permease protein
D RAM_07690 L-arabinose ABC transporter ATPase K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D RAM_22395 sugar ABC transporter periplasmic protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D RAM_06645 sugar ABC transporter periplasmic protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D RAM_22410 inner membrane ABC transporter permease protein YjfF K23509 ytfT; galactofuranose transport system permease protein
D RAM_06635 sugar ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D RAM_06630 sugar ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D RAM_22405 sugar ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D RAM_06640 sugar ABC transporter ATPase K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D RAM_22400 sugar ABC transporter ATPase K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D RAM_13120 sugar ABC transporter periplasmic protein K10543 xylF; D-xylose transport system substrate-binding protein
D RAM_13130 ABC transporter permease K10544 xylH; D-xylose transport system permease protein
D RAM_13125 ABC transport system ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D RAM_46870 sugar ABC transporter periplasmic protein K10552 frcB; fructose transport system substrate-binding protein
D RAM_46865 sugar ABC transporter permease K10553 frcC; fructose transport system permease protein
D RAM_46860 sugar ABC transporter ATPase K10554 frcA; fructose transport system ATP-binding protein
D RAM_23130 sugar ABC transporter periplasmic protein K10559 rhaS; rhamnose transport system substrate-binding protein
D RAM_23120 sugar ABC transporter permease K10560 rhaP; rhamnose transport system permease protein
D RAM_23125 sugar ABC transporter permease K10561 rhaQ; rhamnose transport system permease protein
D RAM_23115 sugar ABC transporter ATPase K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D RAM_37870 phosphate ABC transporter periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D RAM_46195 phosphate ABC transporter periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D RAM_37860 phosphate ABC transporter periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D RAM_28915 phosphate ABC transporter periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D RAM_46190 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D RAM_28925 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D RAM_37845 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D RAM_46185 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D RAM_28920 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D RAM_37850 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D RAM_31820 phosphate ABC transporter ATPase K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RAM_28875 phosphate ABC transporter ATPase K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RAM_46180 phosphate ABC transporter ATPase K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RAM_37855 phosphate ABC transporter ATPase K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RAM_06520 ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D RAM_12015 ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D RAM_12010 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein
D RAM_12005 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D RAM_12020 polar amino acid ABC transporter ATPase K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D RAM_36760 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAM_19475 branched-chain amino acid ABC transporter periplasmic protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAM_31480 branched-chain amino acid ABC transporter periplasmic protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAM_07005 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAM_06995 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAM_31485 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAM_36065 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAM_07000 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAM_31490 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAM_36070 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAM_06985 branched-chain amino acid ABC transporter ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAM_31495 branched-chain amino acid ABC transporter ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAM_36060 branched-chain amino acid ABC transporter ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAM_06990 branched-chain amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAM_36750 branched-chain amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAM_19485 branched-chain amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAM_31500 branched-chain amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAM_36055 branched-chain amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAM_42355 metal ABC transporter ATPase K02071 metN; D-methionine transport system ATP-binding protein
D RAM_42085 oligopeptide/dipeptide ABC transporter periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RAM_35545 dipeptide/oligopeptide ABC transporter periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RAM_42080 dipeptide/oligopeptide/nickel ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D RAM_42075 dipeptide/oligopeptide/nickel ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RAM_42070 oligopeptide/dipeptide ABC transporter ATPase K15583 oppD; oligopeptide transport system ATP-binding protein
D RAM_42065 oligopeptide/dipeptide ABC transporter ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D RAM_41245 dipeptide/oligopeptide ABC transporter periplasmic protein K13889 gsiB; glutathione transport system substrate-binding protein
D RAM_41240 dipeptide/oligopeptide/nickel ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D RAM_41235 dipeptide/oligopeptide/nickel ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D RAM_25620 ABC transporter substrate-binding protein K25287 desE; iron-desferrioxamine transport system substrate-binding protein
D RAM_25635 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D RAM_25640 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D RAM_25645 cobalamin/iron ABC transporter ATPase K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D RAM_39675 biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component
D RAM_46305 cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D RAM_01215 polysaccharide/polyol phosphate ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D RAM_01210 polysaccharide/polyol phosphate ABC transporter ATPase K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RAM_34415 ABC transporter K09694 nodJ; lipooligosaccharide transport system permease protein
D RAM_34420 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein
D RAM_34425 multidrug ABC transporter ATPase K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D RAM_44745 ABC transporter K18233 oleC5; oleandomycin transport system permease protein
D RAM_44740 multidrug ABC transporter ATPase K18232 oleC4; oleandomycin transport system ATP-binding protein
D RAM_06355 cell division transport system permease protein FtsX K09811 ftsX; cell division transport system permease protein
D RAM_06350 cell division transport system ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RAM_26860 multidrug ABC transporter ATPase/permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RAM_26865 multidrug ABC transporter ATPase/permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RAM_05345 ABC transporter ATPase/permease K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D RAM_05350 fused ATPase and permease components of ABC transport system K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D RAM_27915 fused ATPase and permease components of ABC transport system K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
D RAM_00835 fused ATPase and permease components of ABC transport system K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
D RAM_25090 ABC transport system ATP-binding protein K18230 tylC; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:amn02060]
D RAM_47770 phosphotransferase system EI component K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RAM_22930 phosphotransferase system EI component K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RAM_13850 phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RAM_22905 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RAM_13870 PTS system, glucose/maltose/N-acetylglucosamine-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RAM_13855 PTS system, glucose/maltose/N-acetylglucosamine-specific IIC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D RAM_06950 mannose/sorbose-specific IIA subunit of PTS system K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RAM_22910 PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RAM_22915 PTS system, fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D RAM_22920 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D RAM_40165 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:amn03070]
D RAM_26985 preprotein translocase SecD subunit K03072 secD; preprotein translocase subunit SecD
D RAM_26980 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RAM_03035 preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D RAM_14235 preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D RAM_03570 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RAM_26990 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D RAM_48015 preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAM_39405 preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAM_06170 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RAM_41045 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RAM_09675 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RAM_09910 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RAM_24850 sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D RAM_05440 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D RAM_24845 sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:amn02020]
D RAM_14070 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RAM_07765 phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RAM_34445 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RAM_02360 two-component system histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D RAM_02365 two-component system response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3
D RAM_38930 two-component system response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3
D RAM_37870 phosphate ABC transporter periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D RAM_46195 phosphate ABC transporter periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D RAM_37860 phosphate ABC transporter periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D RAM_28915 phosphate ABC transporter periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D RAM_05435 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D RAM_43990 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D RAM_10000 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D RAM_09620 two-component system sensor kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RAM_09625 two-component system response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RAM_09605 potassium-transporting ATPase subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D RAM_09610 K+-transporting ATPase ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D RAM_09615 K+-transporting ATPase ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D RAM_14350 cytochrome C oxidase subunit XV assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RAM_42790 two-component system histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D RAM_28580 two-component system histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D RAM_18790 two-component system histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D RAM_28935 two-component system histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D RAM_42795 two-component system response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA
D RAM_28575 two-component system response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA
D RAM_18795 two-component system response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA
D RAM_28940 two-component system response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA
D RAM_36320 serine protease PepD K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D RAM_42775 serine protease PepD K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D RAM_15320 two-component system histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D RAM_41065 two-component system histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D RAM_35470 two-component system histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D RAM_19180 two-component system histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D RAM_29255 two-component system histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D RAM_41070 two component transcriptional regulator, winged helix family protein K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D RAM_00005 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D RAM_18205 two-component system response regulator K07671 prrA; two-component system, OmpR family, response regulator PrrA
D RAM_31970 amino acid adenylation domain-containing protein K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D RAM_41825 two-component system histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RAM_42555 two-component system histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RAM_42550 two-component system response regulator K18352 vanRAc; two-component system, OmpR family, response regulator VanR
D RAM_42565 vanB; D-alanine--D-lactate ligase K15739 vanB; D-alanine---(R)-lactate ligase [EC:6.1.2.1]
D RAM_42570 D-lactate dehydrogenase K18347 vanH; D-specific alpha-keto acid dehydrogenase [EC:1.1.1.-]
D RAM_03365 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RAM_42560 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RAM_22385 hypothetical protein K18353 vanJ; vancomycin resistance protein VanJ
D RAM_00390 citrate lyase beta subunit K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D RAM_40915 malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RAM_43745 malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RAM_02805 GDP-mannose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D RAM_36045 two-component system response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D RAM_33870 two-component system histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D RAM_23165 two-component system histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D RAM_35335 two-component system histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D RAM_33865 two-component system response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D RAM_23160 two-component system response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D RAM_35315 two-component system response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D RAM_35330 two-component system response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D RAM_22295 two-component system sensor kinase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D RAM_28410 two-component system sensor kinase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D RAM_27890 two-component system sensor kinase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D RAM_00840 two-component system sensor kinase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D RAM_27900 two-component system response regulator K07695 devR; two-component system, NarL family, response regulator DevR
D RAM_22300 two-component system response regulator K07695 devR; two-component system, NarL family, response regulator DevR
D RAM_28420 two-component system response regulator K07695 devR; two-component system, NarL family, response regulator DevR
D RAM_00845 two-component system response regulator K07695 devR; two-component system, NarL family, response regulator DevR
D RAM_45180 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RAM_45175 type II secretion system protein K12510 tadB; tight adherence protein B
D RAM_09855 PII uridylyl-transferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D RAM_09850 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D RAM_13700 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_09170 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_06190 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_06235 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_11710 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_13150 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_08015 putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12985 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_47360 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_41655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_19540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_35680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_17205 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_40565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_09720 aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D RAM_31140 aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D RAM_22675 type IV pilus assembly protein PilA K02650 pilA; type IV pilus assembly protein PilA
D RAM_19250 hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D RAM_19325 hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D RAM_19320 hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D RAM_18255 chemotaxis protein methyltransferase CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RAM_21055 chemotaxis protein methyltransferase CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RAM_21040 chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAM_21045 chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAM_33375 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAM_45315 CRP/FNR family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAM_31220 CRP/FNR family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAM_23420 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D RAM_00825 cytochrome bd-I oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RAM_05360 cytochrome bd-I oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RAM_27905 cytochrome bd-I oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RAM_00830 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RAM_27910 cytochrome bd-I oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RAM_05935 protein-tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D RAM_03825 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RAM_38065 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RAM_45705 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D RAM_22600 pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D RAM_20350 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RAM_26450 glycoside hydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RAM_20880 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RAM_37965 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RAM_37950 cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RAM_20035 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RAM_41810 endo-1,4-beta-glucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D RAM_26445 cellulose 1,4-beta-cellobiosidase K19668 CBH2; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.91]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:amn04148]
D RAM_08945 arginase K01476 rocF; arginase [EC:3.5.3.1]
D RAM_28220 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RAM_26245 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:amn02024]
D RAM_11665 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RAM_11765 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RAM_12505 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RAM_09625 two-component system response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RAM_45505 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D RAM_19850 amino acid transporter K20265 gadC; glutamate:GABA antiporter
D RAM_06105 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RAM_46030 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RAM_06115 spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RAM_46015 spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RAM_06110 spermidine/putrescine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RAM_46020 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RAM_06100 spermidine/putrescine ABC transporter ATPase K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RAM_46025 spermidine/putrescine ABC transporter ATPase K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RAM_36760 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAM_19475 branched-chain amino acid ABC transporter periplasmic protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAM_31480 branched-chain amino acid ABC transporter periplasmic protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAM_07005 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAM_06995 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAM_31485 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAM_36065 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAM_07000 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAM_31490 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAM_36070 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAM_06985 branched-chain amino acid ABC transporter ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAM_31495 branched-chain amino acid ABC transporter ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAM_36060 branched-chain amino acid ABC transporter ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAM_06990 branched-chain amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAM_36750 branched-chain amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAM_19485 branched-chain amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAM_31500 branched-chain amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAM_36055 branched-chain amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAM_22590 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D RAM_12435 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_02445 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_05070 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_15930 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_33180 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_36970 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_37170 acyl-CoA synthetase-related protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_45315 CRP/FNR family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAM_31220 CRP/FNR family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAM_38105 beta-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D RAM_26775 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RAM_16985 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RAM_46635 GTP cyclohydrolase II/3,4-dihydroxy 2-butanone 4-phosphate synthase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RAM_42085 oligopeptide/dipeptide ABC transporter periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RAM_35545 dipeptide/oligopeptide ABC transporter periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RAM_42080 dipeptide/oligopeptide/nickel ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D RAM_42075 dipeptide/oligopeptide/nickel ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RAM_42070 oligopeptide/dipeptide ABC transporter ATPase K15583 oppD; oligopeptide transport system ATP-binding protein
D RAM_42065 oligopeptide/dipeptide ABC transporter ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D RAM_00335 ABC dipeptide/oligopeptide transporter periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAM_17610 dipeptide/oligopeptide ABC transporter periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAM_43000 dipeptide/oligopeptide ABC transporter periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAM_19050 dipeptide/oligopeptide ABC transporter periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAM_23700 dipeptide/oligopeptide ABC transporter periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAM_45670 dipeptide/oligopeptide/nickel ABC transporter periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAM_45665 dipeptide/oligopeptide/nickel ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAM_00340 ABC dipeptide/oligopeptide transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAM_17615 dipeptide/oligopeptide/nickel ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAM_42990 dipeptide/oligopeptide/nickel ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAM_19055 dipeptide/oligopeptide/nickel ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAM_23705 dipeptide/oligopeptide/nickel ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAM_00345 ABC dipeptide/oligopeptide transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAM_42985 dipeptide/oligopeptide/nickel ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAM_45660 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAM_23710 dipeptide/oligopeptide/nickel ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAM_17620 dipeptide/oligopeptide/nickel ABC transporter ATPase/permease K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAM_19060 oligopeptide/dipeptide ABC transporter ATPase/permease K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAM_41225 dipeptide/oligopeptide/nickel ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAM_23715 dipeptide/oligopeptide/nickel ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAM_45655 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAM_00350 dipeptide/oligopeptide/nickel ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAM_42980 dipeptide/oligopeptide/nickel ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAM_45650 oligopeptide/dipeptide ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAM_00355 dipeptide/oligopeptide/nickel ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAM_17625 dipeptide/oligopeptide/nickel ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAM_42995 dipeptide/oligopeptide/nickel ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAM_19065 dipeptide/oligopeptide/nickel ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAM_48015 preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAM_39405 preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAM_03035 preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D RAM_14235 preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D RAM_03570 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RAM_26990 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D RAM_06170 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RAM_41045 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RAM_09675 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RAM_09910 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RAM_16410 phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D RAM_39000 phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D RAM_45985 phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:amn02030]
D RAM_08080 sugar ABC transporter periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D RAM_09325 sugar ABC transporter periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D RAM_20275 sugar ABC transporter periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D RAM_15710 sugar ABC transporter periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D RAM_21040 chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAM_21045 chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAM_33375 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAM_18255 chemotaxis protein methyltransferase CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RAM_21055 chemotaxis protein methyltransferase CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
C 02040 Flagellar assembly [PATH:amn02040]
D RAM_13215 RNA polymerase primary sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D RAM_10000 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RAM_41830 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAM_42110 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:amn04980]
D RAM_39920 diol dehydratase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RAM_04665 membrane ATPase/protein kinase K07588 MMAA; GTPase [EC:3.6.5.-]
D RAM_08020 LAO/AO transport system kinase K07588 MMAA; GTPase [EC:3.6.5.-]
D RAM_04655 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAM_04660 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RAM_26370 metH; B12-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RAM_25035 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:amn01501]
D RAM_22230 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RAM_41745 beta-glucosidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RAM_45195 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RAM_42085 oligopeptide/dipeptide ABC transporter periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RAM_35545 dipeptide/oligopeptide ABC transporter periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RAM_42080 dipeptide/oligopeptide/nickel ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D RAM_42075 dipeptide/oligopeptide/nickel ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RAM_42070 oligopeptide/dipeptide ABC transporter ATPase K15583 oppD; oligopeptide transport system ATP-binding protein
D RAM_42065 oligopeptide/dipeptide ABC transporter ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D RAM_17855 peptidase M48 K02172 blaR1; bla regulator protein blaR1
D RAM_17605 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RAM_35715 beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RAM_26100 beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RAM_26090 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RAM_32100 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RAM_37230 beta-lactamase class B K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:amn01502]
D RAM_41825 two-component system histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RAM_42555 two-component system histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RAM_42550 two-component system response regulator K18352 vanRAc; two-component system, OmpR family, response regulator VanR
D RAM_03365 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RAM_42560 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RAM_08845 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RAM_47985 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RAM_03780 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RAM_42570 D-lactate dehydrogenase K18347 vanH; D-specific alpha-keto acid dehydrogenase [EC:1.1.1.-]
D RAM_42565 vanB; D-alanine--D-lactate ligase K15739 vanB; D-alanine---(R)-lactate ligase [EC:6.1.2.1]
D RAM_32085 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RAM_32080 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RAM_32065 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RAM_22385 hypothetical protein K18353 vanJ; vancomycin resistance protein VanJ
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:amn01503]
D RAM_45725 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RAM_47970 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RAM_05435 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D RAM_43990 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D RAM_00175 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RAM_01060 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RAM_31970 amino acid adenylation domain-containing protein K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:amn01000]
C 01001 Protein kinases [BR:amn01001]
D RAM_10455 RIO kinase 1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D RAM_01775 protein kinase K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1]
D RAM_30010 serine/threonine protein kinase K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1]
D RAM_45430 serine/threonine protein kinase K22893 pknH; serine/threonine kinase PknH [EC:2.7.11.1]
D RAM_16255 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RAM_30435 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RAM_00255 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RAM_11800 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RAM_00260 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RAM_16270 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RAM_16010 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RAM_16265 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RAM_45865 non-specific serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RAM_42850 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RAM_38965 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RAM_28720 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RAM_04045 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RAM_12065 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RAM_13485 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RAM_04650 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RAM_15520 anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D RAM_26550 anti-sigma factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RAM_01465 anti-sigma factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RAM_30215 anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RAM_30235 anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RAM_39005 anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RAM_02360 two-component system histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D RAM_09620 two-component system sensor kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RAM_42790 two-component system histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D RAM_28580 two-component system histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D RAM_18790 two-component system histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D RAM_28935 two-component system histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D RAM_15320 two-component system histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D RAM_41065 two-component system histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D RAM_35470 two-component system histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D RAM_19180 two-component system histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D RAM_29255 two-component system histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D RAM_41825 two-component system histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RAM_42555 two-component system histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RAM_08830 two-component system histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RAM_34605 two-component system histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RAM_16060 two-component system histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RAM_45805 two-component system sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RAM_33870 two-component system histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D RAM_23165 two-component system histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D RAM_35335 two-component system histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D RAM_22295 two-component system sensor kinase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D RAM_28410 two-component system sensor kinase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D RAM_27890 two-component system sensor kinase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D RAM_00840 two-component system sensor kinase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D RAM_01295 two-component system histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D RAM_31135 two-component system histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D RAM_00665 two-component system histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D RAM_08070 two-component system histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D RAM_40970 two-component system sensor kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:amn01009]
D RAM_41135 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RAM_26810 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RAM_21625 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D RAM_18985 protein phosphatase 2C K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RAM_34690 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RAM_00275 protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RAM_45875 protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RAM_39705 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:amn01002]
D RAM_15100 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RAM_22640 leader peptidase (prepilin peptidase)/N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RAM_36470 leader peptidase (prepilin peptidase)/N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RAM_19295 peptidase M52/hydrogen uptake protein K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D RAM_44760 pyroglutamyl-peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D RAM_03995 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RAM_09175 anthranilate synthase component II K07010 K07010; putative glutamine amidotransferase
D RAM_30125 NLP/P60-family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RAM_11250 NLP/P60-family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RAM_25220 hypothetical protein K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D RAM_46340 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RAM_24170 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RAM_11740 glutamate synthase (NADPH/NADH) large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RAM_36100 glutamate synthase (NADPH/NADH) large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RAM_03755 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RAM_38205 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RAM_44060 glucosamine-6-phosphate deaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RAM_02825 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RAM_11165 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RAM_09595 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RAM_35520 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RAM_34810 ThiJ/PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124]
D RAM_37835 sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70]
D RAM_28880 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D RAM_05540 CAAX amino terminal protease K07052 K07052; CAAX protease family protein
D RAM_09920 integral membrane protein K07052 K07052; CAAX protease family protein
D RAM_09925 integral membrane protein K07052 K07052; CAAX protease family protein
D RAM_30085 hypothetical protein K07052 K07052; CAAX protease family protein
D RAM_34975 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RAM_23615 peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D RAM_17365 extracellular neutral protease K01416 snpA; snapalysin [EC:3.4.24.77]
D RAM_14430 metalloprotease K01416 snpA; snapalysin [EC:3.4.24.77]
D RAM_44955 carboxypeptidase T K05996 cpt; carboxypeptidase T [EC:3.4.17.18]
D RAM_18405 muramoyl-pentapeptide carboxypeptidase K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RAM_03365 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RAM_42560 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RAM_05840 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-]
D RAM_05845 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-]
D RAM_11080 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RAM_05400 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RAM_44165 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D RAM_17585 glutamate carboxypeptidase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D RAM_05255 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RAM_19840 hypothetical protein K23980 tpdA; cysteinylglycine-S-conjugate dipeptidase [EC:3.4.13.23]
D RAM_03580 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RAM_10385 methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RAM_40690 methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RAM_05270 aminopeptidase K19702 E3.4.11.24; aminopeptidase S [EC:3.4.11.24]
D RAM_44885 cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RAM_10220 peptidase M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D RAM_02935 Zn-dependent protease with chaperone function K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D RAM_23695 peptide/nickel transport system substrate-binding protein K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D RAM_17855 peptidase M48 K02172 blaR1; bla regulator protein blaR1
D RAM_44845 integral membrane protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D RAM_05435 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D RAM_43990 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D RAM_36320 serine protease PepD K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D RAM_42775 serine protease PepD K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D RAM_03660 subtilisin-like serine protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D RAM_11340 peptidase S8 and S53, subtilisin, kexin, sedolisin K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D RAM_12210 prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D RAM_13660 dipeptidyl-peptidase 4 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D RAM_04315 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RAM_22380 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RAM_44925 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RAM_34575 protease subunit of ATP-dependent Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RAM_34580 protease subunit of ATP-dependent Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RAM_23620 protease subunit of ATP-dependent Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RAM_12245 x-prolyl-dipeptidyl aminopeptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D RAM_32585 x-prolyl-dipeptidyl aminopeptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D RAM_30790 x-prolyl-dipeptidyl aminopeptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D RAM_02980 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RAM_06315 PDZ domain-containing protein K07177 K07177; Lon-like protease
D RAM_12165 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D RAM_17670 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D RAM_14420 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RAM_09960 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RAM_28105 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RAM_41835 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RAM_20075 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RAM_06120 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D RAM_25285 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D RAM_17280 epoxide hydrolase K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-]
D RAM_43305 kumamolisin K08677 kscP; kumamolisin [EC:3.4.21.123]
D RAM_23730 muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RAM_24905 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D RAM_24910 proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D RAM_00535 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAM_14045 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RAM_28180 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C 01003 Glycosyltransferases [BR:amn01003]
D RAM_24085 dolichol-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D RAM_42420 glycosyl transferase family protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D RAM_27110 phosphatidylinositol alpha-mannosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D RAM_11255 glycosyl transferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D RAM_02640 glycosyl transferase K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D RAM_01025 glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D RAM_03845 N-acetyl-glucosamine transferase K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D RAM_02635 glycosyl transferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D RAM_08365 glycosyl transferase K16150 K16150; glycogen synthase [EC:2.4.1.11]
D RAM_22735 glycosyl transferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D RAM_39980 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D RAM_05040 transmembrane protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D RAM_05045 transmembrane protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D RAM_22790 integral membrane protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D RAM_43435 hypothetical protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D RAM_23720 hypothetical protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D RAM_14370 hypothetical protein K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D RAM_38725 coagulation factor 5/8 type K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
D RAM_01205 glycosyl transferase K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D RAM_01175 glycosyl transferase K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
D RAM_05160 glycosyl transferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D RAM_22850 glycosyl transferase K05841 E2.4.1.173; sterol 3beta-glucosyltransferase [EC:2.4.1.173]
D RAM_44490 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D RAM_14140 putative glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
D RAM_05340 putative glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:amn01005]
D RAM_01060 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RAM_19330 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RAM_19340 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RAM_21760 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RAM_21755 D-beta-D-heptose 7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D RAM_40000 dolichol-phosphate mannosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D RAM_39980 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:amn01011]
D RAM_39915 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RAM_02315 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RAM_32060 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RAM_32075 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RAM_32090 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RAM_08845 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RAM_47985 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RAM_03780 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RAM_39590 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RAM_23730 muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RAM_32080 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RAM_32065 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RAM_06125 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RAM_23605 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RAM_33320 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RAM_14705 MviN-like protein K03980 murJ; putative peptidoglycan lipid II flippase
D RAM_47940 MviN-like protein K03980 murJ; putative peptidoglycan lipid II flippase
D RAM_32100 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RAM_00265 peptidoglycan glycosyl transferase K05364 pbpA; penicillin-binding protein A
D RAM_04315 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RAM_22380 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RAM_44925 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RAM_03365 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RAM_42560 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RAM_18405 muramoyl-pentapeptide carboxypeptidase K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D RAM_30125 NLP/P60-family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RAM_11250 NLP/P60-family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D RAM_25220 hypothetical protein K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D RAM_37835 sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70]
D RAM_28880 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D RAM_13805 aminodeoxychorismate lyase-like protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RAM_45725 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RAM_47970 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:amn01004]
D RAM_10685 [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RAM_14755 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RAM_10680 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RAM_20500 3-oxoacyl-(ACP) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RAM_18465 3-oxoacyl-(ACP) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RAM_20725 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RAM_01345 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RAM_10670 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAM_17790 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAM_20430 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAM_20610 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RAM_15980 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_12000 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_01070 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_15285 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_38350 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_47355 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_20600 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_27660 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_27680 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_28820 short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_29125 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_17210 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_17655 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_47835 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_06765 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_19430 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_07280 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RAM_12560 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D RAM_19505 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D RAM_19580 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D RAM_25150 enoyl-(acyl carrier protein) reductase K11611 inhA; meromycolic acid enoyl-[acyl-carrier-protein] reductase [EC:1.3.1.118]
D RAM_14345 stearoyl-CoA desaturase (delta-9 desaturase) K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RAM_22995 stearoyl-CoA desaturase (delta-9 desaturase) K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RAM_28480 stearoyl/acyl-CoA desaturase (delta-9 desaturase) K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RAM_42280 stearoyl-CoA desaturase (delta-9 desaturase) K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RAM_20980 fatty acid desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D RAM_10610 fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D RAM_22825 type I polyketide synthase K12437 pks13; polyketide synthase 13
D RAM_17125 phenolpthiocerol synthesis type-I polyketide synthase PpsD K12443 ppsD; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D [EC:2.3.1.292]
D RAM_27705 3-oxoacyl-[acyl-carrier-protein] synthase II K05551 actI1; minimal PKS ketosynthase (KS/KS alpha) [EC:2.3.1.- 2.3.1.260 2.3.1.235]
D RAM_27700 3-oxoacyl-[acyl-carrier-protein] synthase II K05552 actI2; minimal PKS chain-length factor (CLF/KS beta) [EC:2.3.1.- 2.3.1.260 2.3.1.235]
D RAM_27695 3-oxoacyl-ACP synthase acylcarrier protein K05553 actI3; minimal PKS acyl carrier protein
D RAM_27210 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAM_25435 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAM_45240 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RAM_42440 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RAM_01385 acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D RAM_16625 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D RAM_19565 6-carboxyhexanoate-CoA ligase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D RAM_12435 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_02445 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_05070 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_15930 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_33180 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_36970 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_37170 acyl-CoA synthetase-related protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_03725 fatty acyl-AMP ligase K12426 fadD26; long-chain fatty acid adenylase/transferase FadD26 [EC:6.2.1.59]
D RAM_07425 AMP-binding domain protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RAM_17525 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RAM_27275 AMP-binding domain protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RAM_43600 AMP-binding domain protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RAM_16635 fatty-acyl-CoA synthase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RAM_42335 long-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RAM_20110 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RAM_05335 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RAM_12495 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RAM_30760 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:amn01008]
D RAM_03155 rifamycin polyketide synthase K15670 rifA; rifamycin polyketide synthase modules 1, 2 and 3 [EC:6.2.1.74]
D RAM_03160 rifamycin polyketide synthase K15671 rifB; rifamycin polyketide synthase modules 4, 5 and 6
D RAM_03165 rifamycin polyketide synthase K15672 rifC_D; rifamycin polyketide synthase modules 7 and 8
D RAM_03170 rifamycin polyketide synthase K15672 rifC_D; rifamycin polyketide synthase modules 7 and 8
D RAM_03175 rifamycin polyketide synthase K15673 rifE; rifamycin polyketide synthase modules 9 and 10
D RAM_17125 phenolpthiocerol synthesis type-I polyketide synthase PpsD K12443 ppsD; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D [EC:2.3.1.292]
D RAM_35220 type I polyketide synthase K15314 sgcE; enediyne polyketide synthase
D RAM_27690 polyketide cyclase/dehydratase K14670 whiEVI; aromatase
D RAM_27715 polyketide synthesis cyclase K14671 whiEVII; cyclase
D RAM_27705 3-oxoacyl-[acyl-carrier-protein] synthase II K05551 actI1; minimal PKS ketosynthase (KS/KS alpha) [EC:2.3.1.- 2.3.1.260 2.3.1.235]
D RAM_27700 3-oxoacyl-[acyl-carrier-protein] synthase II K05552 actI2; minimal PKS chain-length factor (CLF/KS beta) [EC:2.3.1.- 2.3.1.260 2.3.1.235]
D RAM_27695 3-oxoacyl-ACP synthase acylcarrier protein K05553 actI3; minimal PKS acyl carrier protein
D RAM_06935 beta-lactamase class B K05555 actIV; cyclase [EC:4.-.-.-]
D RAM_02025 beta-lactamase class B K05555 actIV; cyclase [EC:4.-.-.-]
D RAM_15780 MbtH protein K05375 mbtH; MbtH protein
D RAM_20570 MbtH protein K05375 mbtH; MbtH protein
D RAM_31990 MbtH protein K05375 mbtH; MbtH protein
D RAM_25615 MbtH protein K05375 mbtH; MbtH protein
D RAM_24270 MbtH protein K05375 mbtH; MbtH protein
D RAM_24400 MbtH protein K05375 mbtH; MbtH protein
D RAM_35215 hypothetical protein K15315 sgcE10; enediyne core biosynthesis thioesterase
D RAM_32655 hydroxylacyl-CoA dehydrogenase K05556 actVI1; ketoreductase RED1 [EC:1.1.1.-]
D RAM_03300 mhpA; 3-(3-hydroxyphenyl)propionate hydroxylase K16022 rif19; flavoprotein hydroxylase
D RAM_37725 cytochrome P450 K20420 ncsB3; 2-hydroxy-5-methyl-1-naphthoate 7-hydroxylase [EC:1.14.15.31]
D RAM_22080 microsomal epoxide hydrolase K21159 sgcF; epoxide hydrolase
D RAM_21955 epocide hydrolase domain-containing protein K21159 sgcF; epoxide hydrolase
D RAM_35150 microsomal epoxide hydrolase K21159 sgcF; epoxide hydrolase
D RAM_16160 microsomal epoxide hydrolase K21159 sgcF; epoxide hydrolase
D RAM_31870 microsomal epoxide hydrolase K21159 sgcF; epoxide hydrolase
D RAM_28275 epoxide hydrolase K21159 sgcF; epoxide hydrolase
D RAM_20055 epoxide hydrolase K21159 sgcF; epoxide hydrolase
D RAM_27710 cupin 2 domain-containing protein K14673 whiEII; putative monooxygenase
D RAM_27740 FAD-dependent oxidoreductase K14672 whiEVIII; putative polyketide hydroxylase
D RAM_27735 FAD-dependent oxidoreductase K14672 whiEVIII; putative polyketide hydroxylase
D RAM_03320 methyltransferase type 11 K15467 rif14; 27-O-demethylrifamycin SV methyltransferase [EC:2.1.1.315]
D RAM_16420 O-methyltransferase-related protein K20421 ncsB1; 2,7-dihydroxy-5-methyl-1-naphthoate 7-O-methyltransferase [EC:2.1.1.303]
D RAM_24215 acyl-CoA dehydrogenase K16026 asm15; methoxymalonate biosynthesis protein
D RAM_24210 FkbH-like protein K16027 asm16; methoxymalonate biosynthesis protein
D RAM_03180 N-acetyltransferase/amide synthase K15466 rifF; amide synthase
D RAM_03305 acyltransferase PapA5 K16023 rif20; acetyltransferase
D RAM_34190 cyclase-dehydratase K14627 actVI3; dehydratase [EC:4.2.1.-]
D RAM_35265 hypothetical protein K21160 sgcE2; enediyne biosynthesis protein E2
D RAM_35260 enediyne biosynthesis protein K21161 sgcE3; enediyne biosynthesis protein E3
D RAM_35255 ASPIC/UnbV domain-containing protein K21162 sgcE4; enediyne biosynthesis protein E4
D RAM_35250 hypothetical protein K21163 sgcE5; enediyne biosynthesis protein E5
D RAM_35245 cytochrome P450 K21164 sgcE7; enediyne biosynthesis protein E7
D RAM_35240 hypothetical protein K21165 sgcE8; enediyne biosynthesis protein E8
D RAM_35235 oxidoreductase K21166 sgcE9; enediyne biosynthesis protein E9
D RAM_35225 wyosine base formation K21167 sgcE11; enediyne biosynthesis protein E11
D RAM_35210 oxidoreductase K21185 sgcE6; flavin reductase
D RAM_20165 glycosyl transferase K16444 gtfB; vancomycin aglycone glucosyltransferase [EC:2.4.1.310]
D RAM_28035 glycosyl transferase K16444 gtfB; vancomycin aglycone glucosyltransferase [EC:2.4.1.310]
D RAM_04555 (S)-2-hydroxy-acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D RAM_24430 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:amn01006]
D RAM_11830 geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RAM_07705 dimethylallyltranstransferase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RAM_20770 polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RAM_41485 undecaprenyl pyrophosphate synthase K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D RAM_33935 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RAM_11820 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RAM_20760 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RAM_12130 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RAM_02595 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D RAM_14280 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RAM_01145 phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45]
C 01007 Amino acid related enzymes [BR:amn01007]
D RAM_21065 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAM_30930 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RAM_04290 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RAM_41270 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RAM_44565 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RAM_34360 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RAM_40050 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RAM_42375 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RAM_15070 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RAM_12140 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RAM_34490 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RAM_47840 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RAM_01390 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RAM_06140 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RAM_44815 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RAM_13735 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RAM_24185 asparagine synthetase A K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RAM_06755 aspC; aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D RAM_04585 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RAM_33885 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RAM_00980 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RAM_10545 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RAM_46005 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RAM_27135 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RAM_13795 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RAM_25585 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RAM_31025 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RAM_31020 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RAM_02155 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D RAM_01375 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAM_11470 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAM_36180 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RAM_10445 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RAM_42585 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RAM_13640 ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D RAM_30975 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RAM_06070 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RAM_00975 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RAM_40485 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D RAM_44120 diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D RAM_40360 adenosylmethionine-8-amino-7-oxononanoate transaminase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D RAM_11275 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D RAM_01410 2,2-dialkylglycine decarboxylase K00596 E4.1.1.64; 2,2-dialkylglycine decarboxylase (pyruvate) [EC:4.1.1.64]
D RAM_02535 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RAM_02870 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RAM_11100 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAM_24205 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RAM_43430 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RAM_01055 aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450 [BR:amn00199]
D RAM_12965 cytochrome P450 K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29]
D RAM_22890 cytochrome P450 K24192 CYP138; cytochrome P450 family 138 [EC:1.14.-.-]
C 00194 Photosynthesis proteins [BR:amn00194]
D RAM_39935 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RAM_39940 F-type H+-transporting ATPase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RAM_39945 F-type H+-transporting ATPase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RAM_39950 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RAM_39955 F-type H+-transporting ATPase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RAM_39960 F-type H+-transporting ATPase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RAM_20625 F-type H+-transporting ATPase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RAM_39965 F-type H+-transporting ATPase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RAM_39970 F-type H+-transporting ATPase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:amn03000]
D RAM_01805 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAM_31530 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAM_47315 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAM_29570 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D RAM_30715 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D RAM_18115 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D RAM_35325 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D RAM_37720 AraC family transcriptional regulator K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D RAM_25025 adenosine deaminase/DNA-3-methyladenine glycosylase/8-oxoguanine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RAM_41355 adenosine deaminase/DNA-3-methyladenine glycosylase/8-oxoguanine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RAM_39310 AraC family transcriptional regulator K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D RAM_31890 AraC family transcriptional regulator K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D RAM_39535 AraC family transcriptional regulator K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D RAM_32035 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D RAM_19960 DeoR family transcriptional regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D RAM_22925 DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D RAM_11895 DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D RAM_13305 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAM_08100 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAM_12410 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAM_46875 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAM_46880 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAM_17325 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAM_17415 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAM_25830 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAM_38115 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAM_22545 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAM_22955 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAM_23110 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAM_23410 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAM_26740 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAM_35590 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAM_31280 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAM_29510 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAM_29520 LacI family transcription regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAM_29550 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAM_20835 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D RAM_15750 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D RAM_06650 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D RAM_13860 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D RAM_44055 GntR family transcriptional regulator K24969 dasR; GntR family transcriptional regulator, nutrient-sensing system regulator
D RAM_06960 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D RAM_13025 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D RAM_46125 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D RAM_16850 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D RAM_37375 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D RAM_01360 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RAM_15735 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RAM_00330 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RAM_06090 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RAM_09245 GntR family transcriptional regulator K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D RAM_46525 GntR family transcriptional regulator K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D RAM_24370 GntR family transcriptional regulator K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D RAM_10315 GntR family transcriptional regulator fused with aminotransferase K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RAM_08030 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RAM_08840 GntR family transcriptional regulator fused with aminotransferase K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RAM_12225 GntR family transcriptional regulator fused with aminotransferase K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RAM_42835 GntR family transcriptional regulator fused with aminotransferase K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RAM_38750 GntR family transcriptional regulator fused with aminotransferase K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RAM_21255 GntR family transcriptional regulator fused with aminotransferase K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RAM_35965 GntR family transcriptional regulator fused with aminotransferase K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D RAM_17055 TetR family transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D RAM_06335 TetR family transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D RAM_16100 TetR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D RAM_18860 TetR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D RAM_09885 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D RAM_18120 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D RAM_10725 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D RAM_32865 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D RAM_32910 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D RAM_25140 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D RAM_37660 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D RAM_25310 TetR family transcriptional regulator K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
D RAM_19455 TetR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D RAM_12715 TetR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D RAM_15940 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D RAM_37100 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D RAM_36705 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D RAM_14870 TetR family transcriptional regulator K22295 K22295; TetR/AcrR family transcriptional regulator, repressor for neighboring sulfatase
D RAM_31900 TetR family transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
D RAM_46060 Lrp/AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D RAM_21575 Lrp/AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D RAM_03370 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAM_02580 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAM_06200 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAM_39770 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAM_24800 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAM_01340 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAM_30050 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAM_36040 two-component system sensor kinase K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
D RAM_33145 LuxR family transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D RAM_19880 LuxR family transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D RAM_19910 LuxR family transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D RAM_23630 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D RAM_28760 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D RAM_14985 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D RAM_17470 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D RAM_01595 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D RAM_26220 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D RAM_23570 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RAM_11515 MerR family transcriptional regulator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D RAM_15305 MerR family transcriptional regulator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D RAM_46995 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D RAM_25100 MerR family transcriptional regulator K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D RAM_15860 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D RAM_22750 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D RAM_20805 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D RAM_03900 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D RAM_33910 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RAM_20925 Fur family transcriptional regulator K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D RAM_09690 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D RAM_25540 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D RAM_28325 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D RAM_30650 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D RAM_09460 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D RAM_24695 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D RAM_45315 CRP/FNR family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAM_31220 CRP/FNR family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RAM_03875 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D RAM_03860 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D RAM_16890 ArsR family transcriptional regulator K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RAM_15155 ArsR family transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D RAM_33905 ArsR family transcriptional regulator K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D RAM_08315 XRE family transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D RAM_32215 XRE family transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D RAM_09150 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator
D RAM_05365 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D RAM_12290 Mn-dependent transcriptional regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D RAM_43100 Mn-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D RAM_04955 biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RAM_22005 Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D RAM_02460 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D RAM_36455 hypothetical protein K27097 espR; ESX-1-secreted protein regulator
D RAM_23210 hypothetical protein K27097 espR; ESX-1-secreted protein regulator
D RAM_04610 hypothetical protein K27097 espR; ESX-1-secreted protein regulator
D RAM_09130 hypothetical protein K27097 espR; ESX-1-secreted protein regulator
D RAM_38680 XRE family transcriptional regulator K07727 K07727; putative transcriptional regulator
D RAM_10230 XRE family transcriptional regulator K07729 K07729; putative transcriptional regulator
D RAM_43230 XRE family transcriptional regulator K07729 K07729; putative transcriptional regulator
D RAM_36260 XRE family transcriptional regulator K07729 K07729; putative transcriptional regulator
D RAM_45420 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D RAM_03895 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D RAM_41200 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D RAM_01470 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D RAM_32680 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D RAM_40965 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D RAM_06265 WhiB family transcriptional regulator K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D RAM_35380 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D RAM_34050 PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D RAM_35275 SARP family transcriptional regulator K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon
D RAM_47990 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RAM_37450 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RAM_44535 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D RAM_30965 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism
D RAM_34015 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D RAM_42950 PaaX family transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D RAM_20640 PaaX family transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D RAM_20690 PaaX family transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D RAM_25695 PaaX family transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D RAM_35735 PaaX family transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D RAM_43895 PspC family transcriptional regulator K03973 pspC; phage shock protein C
D RAM_13955 pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RAM_05925 PaiB family transcriptional regulator K07734 paiB; transcriptional regulator
D RAM_47855 hypothetical protein K07735 algH; putative transcriptional regulator
D RAM_12175 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D RAM_32115 MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:amn03021]
D RAM_43870 DNA excision repair protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D RAM_03615 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RAM_03350 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RAM_03355 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RAM_14010 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RAM_13215 RNA polymerase primary sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D RAM_13050 RNA polymerase sigma factor SigB K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D RAM_19145 ECF subfamily RNA polymerase sigma-24 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_44430 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_12520 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_18630 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_20030 RNA polymerase factor sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_13605 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_46920 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_40980 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_33800 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_15015 RNA polymerase sigma factor SigK K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_38540 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_18380 RNA polymerase factor sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_03925 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_09355 RNA polymerase sigma factor SigD K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_22285 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_32690 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_38585 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_38595 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_13885 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_05985 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_12915 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_31165 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_15210 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_33490 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_33495 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_10245 RNA polymerase ECF-subfamily sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_16185 RNA polymerase factor sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_17895 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_21275 RNA polymerase factor sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_23870 RNA polymerase ECF-subfamily sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_23935 RNA polymerase ECF-subfamily sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_31710 RNA polymerase factor sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_32675 RNA polymerase factor sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_35930 RNA polymerase ECF-subfamily sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_42185 ECF subfamily RNA polymerase sigma-24 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_02440 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_05425 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_00380 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_42470 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_44515 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_04915 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_09830 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_32850 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RAM_01460 RNA polymerase sigma factor K03090 sigB; RNA polymerase sigma-B factor
D RAM_31925 RNA polymerase sigma factor K03090 sigB; RNA polymerase sigma-B factor
D RAM_26555 RNA polymerase sigma factor K03090 sigB; RNA polymerase sigma-B factor
D RAM_10000 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D RAM_32510 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RAM_13940 transcription antiterminator NusB K03625 nusB; transcription antitermination protein NusB
D RAM_03040 transcription antiterminator NusG K02601 nusG; transcription termination/antitermination protein NusG
D RAM_15520 anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D RAM_15525 anti-anti-sigma factor K17762 rsbS; rsbT antagonist protein RsbS
D RAM_15530 anti-anti-sigma factor K17763 rsbR; rsbT co-antagonist protein RsbR
D RAM_38175 serine/threonine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D RAM_38170 hydrolase K19707 rsbQ; sigma-B regulation protein RsbQ
D RAM_30200 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
D RAM_30225 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
D RAM_38155 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
D RAM_38180 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
D RAM_28505 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
D RAM_26600 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
D RAM_26550 anti-sigma factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RAM_01465 anti-sigma factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RAM_30215 anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RAM_30235 anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RAM_39005 anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RAM_41575 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RAM_44965 nucleoside diphosphate kinase regulator K03624 greA; transcription elongation factor GreA
D RAM_40025 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RAM_30150 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:amn03019]
D RAM_34405 ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D RAM_09115 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RAM_32305 mRNA degradation ribonucleases J1/J2 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RAM_34210 guanine-specific ribonuclease N1 and T1 K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D RAM_36335 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RAM_15275 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RAM_34350 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RAM_21345 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RAM_41830 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAM_42110 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAM_32400 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RAM_40025 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RAM_30150 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RAM_47010 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RAM_32940 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RAM_26330 chaperone protein DnaK-like protein K04043 dnaK; molecular chaperone DnaK
D RAM_03890 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAM_22050 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAM_34940 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAM_43905 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAM_08775 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RAM_47920 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D RAM_14125 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ
D RAM_24830 ATP-dependent RNA helicase HelY K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D RAM_35830 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D RAM_06515 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:amn03011]
D RAM_31405 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RAM_10010 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RAM_03490 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RAM_03610 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RAM_03545 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RAM_47670 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RAM_03440 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RAM_03530 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RAM_03710 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RAM_03455 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RAM_03605 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RAM_03435 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RAM_03595 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RAM_03525 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RAM_25465 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RAM_32405 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RAM_09930 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RAM_03505 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RAM_47680 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RAM_03480 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RAM_34295 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RAM_03050 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RAM_03475 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RAM_03460 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RAM_03465 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RAM_03520 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RAM_03535 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RAM_47685 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RAM_03065 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RAM_03045 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RAM_44945 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RAM_03070 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RAM_03705 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RAM_03510 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RAM_03555 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RAM_03495 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RAM_03620 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RAM_03540 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RAM_09955 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RAM_31040 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RAM_34400 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RAM_03485 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RAM_03470 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RAM_03515 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RAM_34395 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RAM_08890 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RAM_03500 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RAM_03550 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RAM_25480 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D RAM_40020 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RAM_09110 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RAM_25485 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RAM_03000 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RAM_25470 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RAM_48025 hypothetical protein K02914 RP-L34; large subunit ribosomal protein L34
D RAM_31045 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RAM_03590 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RAM_30600 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RAM_42315 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D RAM_r48136 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAM_r48140 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAM_r48138 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAM_r48142 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAM_r48148 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAM_r48150 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAM_r48144 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAM_r48146 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAM_r48156 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAM_r48158 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAM_r48154 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAM_r48152 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:amn03009]
D RAM_09115 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RAM_10455 RIO kinase 1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D RAM_36335 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RAM_33970 era; GTPase Era K03595 era; GTPase
D RAM_34390 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D RAM_32510 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RAM_13940 transcription antiterminator NusB K03625 nusB; transcription antitermination protein NusB
D RAM_03040 transcription antiterminator NusG K02601 nusG; transcription termination/antitermination protein NusG
D RAM_42360 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RAM_14055 ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RAM_09075 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RAM_34005 ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RAM_48000 glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RAM_32110 S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RAM_42415 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RAM_30910 hemolysin-like protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D RAM_09840 rRNA (guanine-N1-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D RAM_41025 RNA methyltransferase YjfH K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RAM_44570 RNA methyltransferase YjfH K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RAM_10080 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RAM_17460 RNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RAM_30800 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RAM_15105 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RAM_03815 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RAM_42675 ribosomal-protein-alanine N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D RAM_14600 acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D RAM_09940 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D RAM_32230 2-methylthioadenine synthetase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D RAM_22260 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D RAM_34405 ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D RAM_13800 holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RAM_41000 ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RAM_30755 GTP-binding protein Der K03977 engA; GTPase
D RAM_12155 GTP-binding protein HflX K03665 hflX; GTPase
D RAM_39985 SUA5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RAM_26970 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RAM_32490 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D RAM_32515 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP
D RAM_01270 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D RAM_34340 hypothetical protein K09710 ybeB; ribosome-associated protein
D RAM_33985 metal-binding heat shock protein K07042 ybeY; probable rRNA maturation factor
D RAM_41350 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D RAM_09105 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:amn03016]
D RAM_07465 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D RAM_34210 guanine-specific ribonuclease N1 and T1 K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D RAM_45555 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D RAM_21065 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAM_10545 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RAM_15070 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RAM_47840 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RAM_42375 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RAM_34360 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RAM_40050 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RAM_01390 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RAM_06140 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RAM_44815 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RAM_13735 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RAM_13795 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RAM_24185 asparagine synthetase A K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RAM_33885 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RAM_46005 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RAM_27135 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RAM_00980 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RAM_44565 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RAM_12140 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RAM_34490 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RAM_04585 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RAM_25585 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RAM_31025 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RAM_31020 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RAM_30930 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RAM_04290 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RAM_41270 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RAM_13055 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D RAM_31685 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RAM_34000 protein kinase C inhibitor K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RAM_21975 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RAM_24985 tRNA (adenine-N1-)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D RAM_47530 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RAM_03625 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RAM_32425 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RAM_08435 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RAM_39985 SUA5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RAM_12130 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RAM_26070 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RAM_39580 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D RAM_13420 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D RAM_32410 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D RAM_11510 RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D RAM_06755 aspC; aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D RAM_40985 YbaK/EbsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D RAM_45970 cytidine and deoxycytidylate deaminase family protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RAM_12105 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RAM_09950 tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RAM_25185 RNA methyltransferase CspR K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D RAM_31035 RNA methyltransferase SpoU K03437 spoU; RNA methyltransferase, TrmH family
D RAM_41895 rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family
D RAM_17460 RNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RAM_08440 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RAM_09380 iron-sulfur cluster biosynthesis protein K13628 iscA; iron-sulfur cluster assembly protein
D RAM_46265 glycine cleavage T protein K06980 ygfZ; tRNA-modifying protein YgfZ
D RAM_07815 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D RAM_44915 cell cycle protein MesJ K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RAM_03810 peptidase M22, glycoprotease family protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RAM_03820 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RAM_03790 ATP/GTP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RAM_32400 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:amn03012]
D RAM_32500 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RAM_31050 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RAM_10015 elongation factor EF-Ts K02357 tsf; elongation factor Ts
D RAM_03450 elongation factor EF-Tu K02358 tuf; elongation factor Tu
D RAM_21475 elongation factor Tu K02358 tuf; elongation factor Tu
D RAM_03445 elongation factor EF-G K02355 fusA; elongation factor G
D RAM_22775 elongation factor G K02355 fusA; elongation factor G
D RAM_27085 elongation factor G K02355 fusA; elongation factor G
D RAM_26055 selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D RAM_40015 peptide chain release factor RF-1 K02835 prfA; peptide chain release factor 1
D RAM_10025 ribosome recycling factor K02838 frr; ribosome recycling factor
D RAM_39995 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RAM_21560 HemK protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RAM_21875 methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RAM_42320 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RAM_03585 translation initiation factor IF-1 infA K02518 infA; translation initiation factor IF-1
D RAM_35950 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D RAM_13935 elongation factor EF-P K02356 efp; elongation factor P
D RAM_06345 peptide chain release factor RF-2 K02836 prfB; peptide chain release factor 2
D RAM_46330 peptide chain release factor class I K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:amn03110]
D RAM_46955 ATP-dependent Clp protease ATP-binding subunit ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RAM_44790 ATP-dependent Clp protease ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D RAM_34570 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RAM_21625 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D RAM_47010 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RAM_32940 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RAM_26330 chaperone protein DnaK-like protein K04043 dnaK; molecular chaperone DnaK
D RAM_03890 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAM_22050 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAM_34940 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAM_43905 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAM_47000 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RAM_34010 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RAM_47005 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D RAM_15550 heat shock protein K13993 HSP20; HSP20 family protein
D RAM_29915 heat shock protein K13993 HSP20; HSP20 family protein
D RAM_38575 ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D RAM_03885 chaperonin GroES K04078 groES; chaperonin GroES
D RAM_47195 chaperonin GroES K04078 groES; chaperonin GroES
D RAM_05435 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D RAM_43990 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D RAM_44885 cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RAM_39970 F-type H+-transporting ATPase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RAM_19275 hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D RAM_19270 hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D RAM_03660 subtilisin-like serine protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D RAM_11340 peptidase S8 and S53, subtilisin, kexin, sedolisin K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D RAM_42445 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RAM_34245 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RAM_16855 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RAM_31120 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RAM_25800 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D RAM_00175 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RAM_10325 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D RAM_08025 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D RAM_30730 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D RAM_26915 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D RAM_47965 thioredoxin K03671 TXN; thioredoxin
D RAM_25385 thioredoxin K03671 TXN; thioredoxin
D RAM_13540 thioredoxin K03671 TXN; thioredoxin
D RAM_08135 thioredoxin K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:amn04131]
D RAM_34440 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RAM_32460 hypothetical protein K07192 FLOT; flotillin
D RAM_11790 band 7 domain-containing protein K07192 FLOT; flotillin
D RAM_00815 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D RAM_12455 arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RAM_14220 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAM_02345 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RAM_12555 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RAM_21625 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D RAM_24055 major facilitator transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:amn04121]
D RAM_24915 Prokaryotic ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:amn03051]
D RAM_21625 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D RAM_24905 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D RAM_24910 proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D RAM_24965 vesicle-fusing ATPase K13527 mpa; proteasome-associated ATPase
D RAM_24890 hypothetical protein K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D RAM_24865 HTH type 11 transcriptional regulator K13572 pafB; proteasome accessory factor B
D RAM_24860 HTH type 11 transcriptional regulator K13573 pafC; proteasome accessory factor C
D RAM_24920 proteasome component K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:amn03032]
D RAM_31225 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RAM_01805 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAM_31530 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAM_47315 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAM_08640 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D RAM_08700 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D RAM_08760 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D RAM_00005 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D RAM_47710 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RAM_33795 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RAM_15370 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_01835 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_31570 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_47675 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_10970 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RAM_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAM_45335 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAM_34300 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RAM_45090 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RAM_00870 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAM_11235 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAM_45750 DNA polymerase III subunits gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RAM_05960 bifunctional RNase H/acid phosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D RAM_09965 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RAM_31460 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAM_08480 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RAM_16125 DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RAM_00035 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RAM_06580 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RAM_00030 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RAM_06585 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RAM_45125 DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RAM_21850 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:amn03036]
D RAM_01805 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAM_31530 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAM_47315 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAM_09115 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RAM_32460 hypothetical protein K07192 FLOT; flotillin
D RAM_11790 band 7 domain-containing protein K07192 FLOT; flotillin
D RAM_23245 lysyl tRNA synthetase-like protein K26249 lsr2; nucleoid-associated protein Lsr2
D RAM_08690 lysyl tRNA synthetase-like protein K26249 lsr2; nucleoid-associated protein Lsr2
D RAM_37470 lysyl tRNA synthetase-like protein K26249 lsr2; nucleoid-associated protein Lsr2
D RAM_44810 hypothetical protein K26249 lsr2; nucleoid-associated protein Lsr2
D RAM_08640 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D RAM_08700 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D RAM_08760 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D RAM_00005 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D RAM_45510 starvation-inducible DNA protecting protein K04047 dps; starvation-inducible DNA-binding protein
D RAM_32035 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D RAM_03370 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAM_02580 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAM_06200 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAM_39770 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAM_24800 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAM_01340 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAM_30050 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RAM_09655 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D RAM_30810 segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D RAM_30805 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D RAM_06350 cell division transport system ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RAM_32100 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RAM_01855 TraJ K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RAM_30315 DNA segregation ATPase FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RAM_31590 cell division FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RAM_32265 DNA segregation ATPase FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RAM_45050 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RAM_32055 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D RAM_32070 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D RAM_06355 cell division transport system permease protein FtsX K09811 ftsX; cell division transport system permease protein
D RAM_15025 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RAM_13615 ATP/GTP-binding protein K06916 zapE; cell division protein ZapE
D RAM_45725 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RAM_47970 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RAM_15040 cell division protein sepF K09772 sepF; cell division inhibitor SepF
D RAM_42525 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D RAM_25005 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D RAM_47995 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D RAM_30820 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D RAM_47990 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RAM_37450 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RAM_48000 glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RAM_09995 integrase/recombinase XerC K03733 xerC; integrase/recombinase XerC
D RAM_30825 integrase/recombinase XerD K04763 xerD; integrase/recombinase XerD
D RAM_05445 ATP-binding protein involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RAM_14135 putative sporulation transcription regulator whiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:amn03400]
D RAM_06155 methylated-DNA-[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RAM_25020 methylated-DNA-[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RAM_21535 methylated-DNA-[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RAM_21550 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RAM_43255 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RAM_08880 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RAM_30935 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D RAM_44655 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RAM_45305 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RAM_43870 DNA excision repair protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D RAM_39215 7,8-dihydro-8-oxoguanine triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RAM_23390 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RAM_41275 pyrophosphohydrolase MutT-like protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RAM_42030 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RAM_05585 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RAM_42270 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RAM_13245 dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RAM_37720 AraC family transcriptional regulator K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D RAM_43080 alkylated DNA repair protein K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D RAM_47155 TDG/mug DNA glycosylase family protein K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D RAM_26500 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RAM_42045 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RAM_36310 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RAM_25025 adenosine deaminase/DNA-3-methyladenine glycosylase/8-oxoguanine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RAM_41355 adenosine deaminase/DNA-3-methyladenine glycosylase/8-oxoguanine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RAM_05385 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RAM_00660 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RAM_09125 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RAM_35975 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RAM_32180 endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D RAM_34945 endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D RAM_14110 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RAM_04280 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RAM_47650 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RAM_08480 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RAM_16125 DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RAM_31460 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RAM_31180 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RAM_31355 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RAM_14120 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RAM_04075 DNA helicase II/ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RAM_05760 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RAM_06255 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RAM_03350 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RAM_03355 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RAM_03615 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RAM_14010 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RAM_42210 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RAM_41395 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RAM_41405 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RAM_10970 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RAM_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAM_45335 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RAM_34300 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RAM_45090 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RAM_00870 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAM_11235 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RAM_45750 DNA polymerase III subunits gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RAM_15370 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_01835 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_31570 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_47675 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_47310 DNA mismatch endonuclease, patch repair protein K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D RAM_11920 recombination protein RecA K03553 recA; recombination protein RecA
D RAM_27000 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RAM_26995 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RAM_27005 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RAM_14025 primosomal protein N'/primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RAM_08715 exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D RAM_41365 exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D RAM_08710 nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D RAM_41370 exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D RAM_44525 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D RAM_00020 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF
D RAM_08900 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RAM_33940 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RAM_45715 recR; recombination protein RecR K06187 recR; recombination protein RecR
D RAM_30900 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D RAM_36330 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D RAM_09895 DNA end-binding protein Ku K10979 ku; DNA end-binding protein Ku
D RAM_26515 DNA end-binding protein Ku K10979 ku; DNA end-binding protein Ku
D RAM_26825 DNA end-binding protein Ku K10979 ku; DNA end-binding protein Ku
D RAM_21335 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RAM_26505 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RAM_26870 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RAM_16560 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RAM_21375 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RAM_42900 ATP-dependent DNA ligase/DNA primase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D RAM_00035 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RAM_06580 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RAM_00030 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RAM_06585 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RAM_45125 DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RAM_21850 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RAM_08640 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D RAM_08700 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D RAM_08760 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D RAM_15275 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RAM_34350 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RAM_21345 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RAM_07670 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RAM_23235 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RAM_32165 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RAM_26790 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RAM_12165 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D RAM_17670 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D RAM_04155 DNA polymerase K14161 imuB; protein ImuB
D RAM_38295 DNA polymerase K14161 imuB; protein ImuB
D RAM_04165 dnaE2; error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D RAM_38270 dnaE2; error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D RAM_11925 recombination regulator RecX K03565 recX; regulatory protein
D RAM_39680 ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D RAM_11890 ATP-dependent DNA helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D RAM_08770 NUDIX hydrolase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D RAM_30835 ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D RAM_12180 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RAM_14635 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RAM_43595 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RAM_14630 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:amn03029]
D RAM_32500 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RAM_31050 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RAM_10015 elongation factor EF-Ts K02357 tsf; elongation factor Ts
D RAM_03450 elongation factor EF-Tu K02358 tuf; elongation factor Tu
D RAM_21475 elongation factor Tu K02358 tuf; elongation factor Tu
D RAM_03445 elongation factor EF-G K02355 fusA; elongation factor G
D RAM_22775 elongation factor G K02355 fusA; elongation factor G
D RAM_27085 elongation factor G K02355 fusA; elongation factor G
D RAM_33970 era; GTPase Era K03595 era; GTPase
D RAM_30930 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RAM_47840 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RAM_13735 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RAM_33885 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RAM_34360 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RAM_40050 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RAM_00370 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RAM_08500 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RAM_40445 putative amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RAM_08505 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RAM_08495 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RAM_17260 hypothetical protein K01173 ENDOG; endonuclease G, mitochondrial
D RAM_15370 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_01835 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_31570 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_47675 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RAM_47010 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RAM_32940 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RAM_26330 chaperone protein DnaK-like protein K04043 dnaK; molecular chaperone DnaK
D RAM_47005 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D RAM_03890 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAM_22050 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAM_34940 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAM_43905 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAM_03885 chaperonin GroES K04078 groES; chaperonin GroES
D RAM_47195 chaperonin GroES K04078 groES; chaperonin GroES
D RAM_47000 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RAM_34010 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RAM_08435 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RAM_05445 ATP-binding protein involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RAM_14280 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RAM_14350 cytochrome C oxidase subunit XV assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RAM_48015 preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAM_39405 preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAM_21625 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:amn02000]
D RAM_26860 multidrug ABC transporter ATPase/permease K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RAM_26865 multidrug ABC transporter ATPase/permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RAM_28250 ABC transporter ATPase/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RAM_09905 multidrug ABC transporter ATPase/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RAM_47285 multidrug ABC transporter ATPase/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RAM_41840 multidrug ABC transporter ATPase/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RAM_44245 multidrug ABC transporter ATPase/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RAM_20080 fused ATPase and permease components of ABC transport system K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RAM_40840 multidrug ABC transporter ATPase/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RAM_05345 ABC transporter ATPase/permease K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D RAM_05350 fused ATPase and permease components of ABC transport system K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D RAM_27915 fused ATPase and permease components of ABC transport system K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
D RAM_00835 fused ATPase and permease components of ABC transport system K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
D RAM_25610 multidrug ABC transporter ATPase/permease K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D RAM_25090 ABC transport system ATP-binding protein K18230 tylC; macrolide transport system ATP-binding/permease protein
D RAM_42340 ABC transport system ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D RAM_25605 multidrug ABC transporter ATPase/permease K02021 ABC.MR; putative ABC transport system ATP-binding protein
D RAM_43695 molybdate ABC transporter periplasmic protein K02020 modA; molybdate transport system substrate-binding protein
D RAM_43690 molbdate ABC transporter permease K02018 modB; molybdate transport system permease protein
D RAM_43685 ABC transport system ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RAM_25565 sulfonate/nitrate/taurine ABC transporter periplasmic protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAM_01310 sulfonate/nitrate/taurine ABC transporter periplasmic protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAM_07825 sulfonate/nitrate/taurine ABC transporter periplasmic protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RAM_25575 sulfonate/nitrate/taurine ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D RAM_07835 sulfonate/nitrate/taurine ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D RAM_01305 sulfonate/nitrate/taurine ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D RAM_25570 nitrate/sulfonate/bicarbonate ABC transporter ATPase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RAM_07830 sulfonate/nitrate/taurine ABC transporter ATPase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RAM_01300 sulfonate/nitrate/taurine ABC transporter ATPase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RAM_41315 thiamine ABC transporter periplasmic protein K02064 thiB; thiamine transport system substrate-binding protein
D RAM_41310 ABC-type Fe3+ transport system, permease component K02063 thiP; thiamine transport system permease protein
D RAM_41305 spermidine/putrescine ABC transporter ATPase K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D RAM_06105 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RAM_46030 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RAM_06115 spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RAM_46015 spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RAM_06110 spermidine/putrescine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RAM_46020 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RAM_06100 spermidine/putrescine ABC transporter ATPase K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RAM_46025 spermidine/putrescine ABC transporter ATPase K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RAM_02250 glycine/betaine ABC transporter periplasmic protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D RAM_00500 glycine/betaine ABC transporter periplasmic protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D RAM_40890 glycine/betaine ABC transporter periplasmic protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D RAM_02240 proline/glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RAM_02245 proline/glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RAM_00485 proline/glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RAM_00495 proline/glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RAM_40895 glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RAM_40900 glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D RAM_00490 proline/glycine/betaine ABC transporter ATPase K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RAM_40905 glycine/betaine ABC transporter ATPase K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D RAM_06980 sulfonate/nitrate/taurine ABC transporter periplasmic protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RAM_25845 sulfonate/nitrate/taurine ABC transporter periplasmic protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RAM_17745 sulfonate/nitrate/taurine ABC transporter periplasmic protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RAM_43795 sulfonate/nitrate/taurine ABC transporter periplasmic protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RAM_43860 sulfonate/nitrate/taurine ABC transporter periplasmic protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RAM_45795 sulfonate/nitrate/taurine ABC transporter periplasmic protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RAM_10120 nitrate/sulfonate/bicarbonate ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RAM_21930 nitrate/sulfonate/bicarbonate ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RAM_25840 sulfonate/nitrate/taurine ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RAM_43800 nitrate/sulfonate/bicarbonate ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RAM_45790 sulfonate/nitrate/taurine ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RAM_10125 nitrate/sulfonate/bicarbonate ABC transporter ATPase K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RAM_25850 sulfonate/nitrate/taurine ABC transporter ATPase K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RAM_43810 nitrate/sulfonate/bicarbonate ABC transporter ATPase K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RAM_45785 sulfonate/nitrate/taurine ABC transporter ATPase K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RAM_21935 sulfonate/nitrate/taurine ABC transporter ATPase K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RAM_03775 sugar ABC transporter ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAM_05505 sugar ABC transporter ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAM_22960 sugar ABC transporter periplasmic protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RAM_29490 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RAM_25675 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D RAM_22965 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RAM_29505 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D RAM_29500 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RAM_22970 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RAM_25685 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D RAM_29995 ABC transporter substrate-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein
D RAM_05490 sugar ABC transporter periplasmic protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D RAM_05495 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D RAM_05500 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D RAM_12415 ABC transporter substrate-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D RAM_26440 sugar ABC transporter periplasmic protein K10240 cebE; cellobiose transport system substrate-binding protein
D RAM_26465 sugar ABC transporter periplasmic protein K10240 cebE; cellobiose transport system substrate-binding protein
D RAM_41735 sugar ABC transporter periplasmic protein K10240 cebE; cellobiose transport system substrate-binding protein
D RAM_12420 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D RAM_26470 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D RAM_41730 sugar ABC transporter permease K10241 cebF; cellobiose transport system permease protein
D RAM_12425 sugar ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D RAM_26475 sugar ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D RAM_41725 sugar ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D RAM_22215 sugar ABC transporter periplasmic protein K17329 dasA; N,N'-diacetylchitobiose transport system substrate-binding protein
D RAM_16870 ABC transporter substrate-binding protein K17329 dasA; N,N'-diacetylchitobiose transport system substrate-binding protein
D RAM_31105 ABC transporter substrate-binding protein K17329 dasA; N,N'-diacetylchitobiose transport system substrate-binding protein
D RAM_31110 sugar ABC transporter permease K17330 dasB; N,N'-diacetylchitobiose transport system permease protein
D RAM_22220 sugar ABC transporter permease K17330 dasB; N,N'-diacetylchitobiose transport system permease protein
D RAM_16865 sugar ABC transporter permease K17330 dasB; N,N'-diacetylchitobiose transport system permease protein
D RAM_31115 sugar ABC transporter permease K17331 dasC; N,N'-diacetylchitobiose transport system permease protein
D RAM_16860 sugar ABC transporter permease K17331 dasC; N,N'-diacetylchitobiose transport system permease protein
D RAM_22225 sugar ABC transporter permease K17331 dasC; N,N'-diacetylchitobiose transport system permease protein
D RAM_07695 L-arabinose ABC transporter periplasmic protein K10537 araF; L-arabinose transport system substrate-binding protein
D RAM_07685 L-arabinose ABC transporter permease K10538 araH; L-arabinose transport system permease protein
D RAM_07690 L-arabinose ABC transporter ATPase K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D RAM_13120 sugar ABC transporter periplasmic protein K10543 xylF; D-xylose transport system substrate-binding protein
D RAM_13130 ABC transporter permease K10544 xylH; D-xylose transport system permease protein
D RAM_13125 ABC transport system ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D RAM_22435 sugar ABC transporter periplasmic protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D RAM_22445 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D RAM_22440 sugar ABC transporter ATPase K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAM_46870 sugar ABC transporter periplasmic protein K10552 frcB; fructose transport system substrate-binding protein
D RAM_46865 sugar ABC transporter permease K10553 frcC; fructose transport system permease protein
D RAM_46860 sugar ABC transporter ATPase K10554 frcA; fructose transport system ATP-binding protein
D RAM_23130 sugar ABC transporter periplasmic protein K10559 rhaS; rhamnose transport system substrate-binding protein
D RAM_23120 sugar ABC transporter permease K10560 rhaP; rhamnose transport system permease protein
D RAM_23125 sugar ABC transporter permease K10561 rhaQ; rhamnose transport system permease protein
D RAM_23115 sugar ABC transporter ATPase K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D RAM_08080 sugar ABC transporter periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D RAM_09325 sugar ABC transporter periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D RAM_20275 sugar ABC transporter periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D RAM_15710 sugar ABC transporter periplasmic protein K10439 rbsB; ribose transport system substrate-binding protein
D RAM_08085 sugar ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RAM_20270 sugar ABC transporter permease K10440 rbsC; ribose transport system permease protein
D RAM_22395 sugar ABC transporter periplasmic protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D RAM_06645 sugar ABC transporter periplasmic protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D RAM_22410 inner membrane ABC transporter permease protein YjfF K23509 ytfT; galactofuranose transport system permease protein
D RAM_06635 sugar ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D RAM_06630 sugar ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D RAM_22405 sugar ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D RAM_06640 sugar ABC transporter ATPase K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D RAM_22400 sugar ABC transporter ATPase K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D RAM_04445 sugar ABC transporter periplasmic protein K10227 smoE; polyol transport system substrate-binding protein
D RAM_04450 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein
D RAM_04455 sugar ABC transporter permease K10229 smoG; polyol transport system permease protein
D RAM_22555 sugar ABC transporter periplasmic protein K25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein
D RAM_38135 sugar ABC transporter periplasmic protein K25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein
D RAM_38130 sugar ABC transporter permease K25677 yesP; pectin-derived oligosaccharide transport system permease protein
D RAM_22560 sugar ABC transporter permease K25677 yesP; pectin-derived oligosaccharide transport system permease protein
D RAM_38125 sugar ABC transporter permease K25678 yesQ; pectin-derived oligosaccharide transport system permease protein
D RAM_22565 sugar ABC transporter permease K25678 yesQ; pectin-derived oligosaccharide transport system permease protein
D RAM_04365 ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RAM_04375 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D RAM_04380 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D RAM_04370 sugar ABC transporter ATPase K23537 nupA; general nucleoside transport system ATP-binding protein
D RAM_31265 ABC transporter permease K02069 STAR2; UDP-glucose/iron transport system permease protein
D RAM_03115 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_03095 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_03100 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_03110 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_09005 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_09010 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_09020 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_09025 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_12355 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_12360 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_12370 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_12375 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_39115 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_39120 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_39130 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_39135 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_09015 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_09030 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_39125 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_39140 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_03105 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_12350 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_12365 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_03090 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RAM_03080 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAM_03085 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAM_09035 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAM_09040 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAM_12345 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAM_39145 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAM_39150 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAM_12340 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RAM_03075 ABC transport system ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RAM_12380 hypothetical protein K18481 mas; Mce-associated membrane protein
D RAM_03120 hypothetical protein K18481 mas; Mce-associated membrane protein
D RAM_39110 hypothetical protein K18481 mas; Mce-associated membrane protein
D RAM_09000 hypothetical protein K18481 mas; Mce-associated membrane protein
D RAM_12385 hypothetical protein K18481 mas; Mce-associated membrane protein
D RAM_03125 hypothetical protein K18481 mas; Mce-associated membrane protein
D RAM_39105 integral membrane protein K18481 mas; Mce-associated membrane protein
D RAM_08995 hypothetical protein K18481 mas; Mce-associated membrane protein
D RAM_15995 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RAM_09405 sugar ABC transporter periplasmic protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RAM_22130 sugar ABC transporter periplasmic protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RAM_43165 sugar ABC transporter periplasmic protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RAM_37280 sugar ABC transporter periplasmic protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RAM_20825 sugar ABC transporter periplasmic protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RAM_38470 sugar ABC transporter periplasmic protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RAM_27365 sugar ABC transporter periplasmic protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RAM_16240 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RAM_17330 sugar ABC transporter periplasmic protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RAM_05860 sugar ABC transporter periplasmic protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RAM_15620 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RAM_16500 sugar ABC transporter periplasmic protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RAM_19950 sugar ABC transporter periplasmic protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RAM_16000 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RAM_16235 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RAM_16495 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RAM_09410 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RAM_05865 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RAM_15625 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RAM_25680 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RAM_37285 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RAM_17335 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RAM_22125 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RAM_38480 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RAM_43170 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RAM_35495 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RAM_19945 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RAM_24380 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RAM_20145 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RAM_27360 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RAM_20820 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D RAM_19940 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RAM_38475 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RAM_20815 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RAM_17340 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RAM_37290 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RAM_20140 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RAM_16230 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RAM_16490 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RAM_09415 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RAM_05870 multiple sugar transport system permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RAM_15630 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RAM_22120 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RAM_43175 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RAM_35500 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RAM_24375 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RAM_27355 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RAM_25960 sugar ABC transporter periplasmic protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D RAM_09575 sugar ABC transporter periplasmic protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D RAM_25955 sugar ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D RAM_09335 sugar ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D RAM_09570 sugar ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D RAM_15720 sugar ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D RAM_08090 sugar ABC transporter ATPase K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAM_25950 ABC transport system ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAM_09330 sugar ABC transporter ATPase K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAM_09565 sugar ABC transporter ATPase K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAM_15715 sugar ABC transporter ATPase K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RAM_37870 phosphate ABC transporter periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D RAM_46195 phosphate ABC transporter periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D RAM_37860 phosphate ABC transporter periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D RAM_28915 phosphate ABC transporter periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D RAM_46190 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D RAM_28925 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D RAM_37845 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D RAM_46185 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D RAM_28920 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D RAM_37850 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D RAM_31820 phosphate ABC transporter ATPase K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RAM_28875 phosphate ABC transporter ATPase K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RAM_46180 phosphate ABC transporter ATPase K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RAM_37855 phosphate ABC transporter ATPase K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RAM_06520 ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D RAM_12015 ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D RAM_12010 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein
D RAM_12005 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D RAM_12020 polar amino acid ABC transporter ATPase K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D RAM_36760 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAM_19475 branched-chain amino acid ABC transporter periplasmic protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAM_31480 branched-chain amino acid ABC transporter periplasmic protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAM_07005 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RAM_06995 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAM_31485 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAM_36065 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RAM_07000 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAM_31490 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAM_36070 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RAM_06985 branched-chain amino acid ABC transporter ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAM_31495 branched-chain amino acid ABC transporter ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAM_36060 branched-chain amino acid ABC transporter ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RAM_06990 branched-chain amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAM_36750 branched-chain amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAM_19485 branched-chain amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAM_31500 branched-chain amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAM_36055 branched-chain amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RAM_42355 metal ABC transporter ATPase K02071 metN; D-methionine transport system ATP-binding protein
D RAM_46495 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAM_01770 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAM_17095 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAM_47230 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAM_07615 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAM_46490 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAM_46500 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RAM_07620 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RAM_47225 polar amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RAM_46485 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D RAM_47220 phosphate ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RAM_46480 polar amino acid ABC transporter ATPase K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RAM_07625 polar amino acid ABC transporter ATPase K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RAM_42085 oligopeptide/dipeptide ABC transporter periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RAM_35545 dipeptide/oligopeptide ABC transporter periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein
D RAM_42080 dipeptide/oligopeptide/nickel ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D RAM_42075 dipeptide/oligopeptide/nickel ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D RAM_42070 oligopeptide/dipeptide ABC transporter ATPase K15583 oppD; oligopeptide transport system ATP-binding protein
D RAM_42065 oligopeptide/dipeptide ABC transporter ATPase K10823 oppF; oligopeptide transport system ATP-binding protein
D RAM_41245 dipeptide/oligopeptide ABC transporter periplasmic protein K13889 gsiB; glutathione transport system substrate-binding protein
D RAM_41240 dipeptide/oligopeptide/nickel ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D RAM_41235 dipeptide/oligopeptide/nickel ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D RAM_00335 ABC dipeptide/oligopeptide transporter periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAM_17610 dipeptide/oligopeptide ABC transporter periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAM_43000 dipeptide/oligopeptide ABC transporter periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAM_19050 dipeptide/oligopeptide ABC transporter periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAM_23700 dipeptide/oligopeptide ABC transporter periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAM_45670 dipeptide/oligopeptide/nickel ABC transporter periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RAM_45665 dipeptide/oligopeptide/nickel ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAM_00340 ABC dipeptide/oligopeptide transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAM_17615 dipeptide/oligopeptide/nickel ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAM_42990 dipeptide/oligopeptide/nickel ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAM_19055 dipeptide/oligopeptide/nickel ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAM_23705 dipeptide/oligopeptide/nickel ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RAM_00345 ABC dipeptide/oligopeptide transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAM_42985 dipeptide/oligopeptide/nickel ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAM_45660 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAM_23710 dipeptide/oligopeptide/nickel ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RAM_17620 dipeptide/oligopeptide/nickel ABC transporter ATPase/permease K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAM_19060 oligopeptide/dipeptide ABC transporter ATPase/permease K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAM_41225 dipeptide/oligopeptide/nickel ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAM_23715 dipeptide/oligopeptide/nickel ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAM_45655 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAM_00350 dipeptide/oligopeptide/nickel ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAM_42980 dipeptide/oligopeptide/nickel ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RAM_45650 oligopeptide/dipeptide ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAM_00355 dipeptide/oligopeptide/nickel ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAM_17625 dipeptide/oligopeptide/nickel ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAM_42995 dipeptide/oligopeptide/nickel ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAM_19065 dipeptide/oligopeptide/nickel ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RAM_25620 ABC transporter substrate-binding protein K25287 desE; iron-desferrioxamine transport system substrate-binding protein
D RAM_25635 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D RAM_25640 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein
D RAM_25645 cobalamin/iron ABC transporter ATPase K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D RAM_10065 iron ABC transporter periplasmic protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RAM_33520 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RAM_10055 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D RAM_10050 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D RAM_33515 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D RAM_08190 molybdenum ABC transporter ATPase K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RAM_33510 iron ABC transporter ATPase K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RAM_10060 iron ABC transporter ATPase K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RAM_39675 biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component
D RAM_46295 hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component
D RAM_46305 cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D RAM_46300 cobalt/nickel ABC transporter ATPase K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RAM_44635 metal ABC transporter periplasmic protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D RAM_44625 Mn2+/Zn2+ ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D RAM_44630 metal ABC transporter ATPase K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D RAM_01215 polysaccharide/polyol phosphate ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D RAM_01210 polysaccharide/polyol phosphate ABC transporter ATPase K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RAM_34415 ABC transporter K09694 nodJ; lipooligosaccharide transport system permease protein
D RAM_34420 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein
D RAM_34425 multidrug ABC transporter ATPase K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D RAM_44745 ABC transporter K18233 oleC5; oleandomycin transport system permease protein
D RAM_44740 multidrug ABC transporter ATPase K18232 oleC4; oleandomycin transport system ATP-binding protein
D RAM_01510 exporter of polyketide antibiotics K25149 narB; polyether ionophore transport system permease protein
D RAM_34730 exporter of polyketide antibiotics K25149 narB; polyether ionophore transport system permease protein
D RAM_01515 multidrug ABC transporter ATPase K25150 narA; polyether ionophore transport system ATP-binding protein
D RAM_34735 multidrug ABC transporter ATPase K25150 narA; polyether ionophore transport system ATP-binding protein
D RAM_06355 cell division transport system permease protein FtsX K09811 ftsX; cell division transport system permease protein
D RAM_06350 cell division transport system ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RAM_18600 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_37955 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_33775 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_47510 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_47520 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_06885 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_31325 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_07065 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_10705 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_41300 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_43245 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_00130 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_00210 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_07655 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_14360 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_15395 antibiotic transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_18480 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_27555 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_27605 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_33875 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_36255 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_39170 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_40835 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_42390 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_43405 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_16075 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_10390 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_30415 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_23960 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_33355 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_20565 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_06505 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_33275 integral membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RAM_00125 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_00215 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_06510 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_07060 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_07650 ABC transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_10395 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_14365 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_15400 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_15405 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_16080 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_18475 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_20575 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_23955 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_27560 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_27610 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_33270 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_33770 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_33880 ABC transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_36250 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_39165 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_40830 ABC transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_42385 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_43400 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_47515 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_30410 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_47505 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_33350 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_37960 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_10700 ABC transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_38320 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_30025 ABC transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_43240 ABC transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_31315 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_00240 ABC transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_42175 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_47440 ABC transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_06880 multidrug ABC transporer ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RAM_02520 peptide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RAM_07045 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RAM_20530 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RAM_18025 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RAM_43445 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RAM_46930 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RAM_24735 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RAM_02515 peptide ABC transporter ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RAM_16110 peptide ABC transporter ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RAM_07040 peptide ABC transporter ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RAM_18020 peptide ABC transporter ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RAM_20525 peptide ABC transporter ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RAM_47540 peptide ABC transporter ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RAM_43450 peptide ABC transporter ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RAM_46935 peptide ABC transporter ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RAM_24740 ABC transport system ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RAM_24745 ABC transport system ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RAM_14390 Fe-S cluster assembly ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D RAM_32700 Na+-dependent transporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D RAM_32445 DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D RAM_26380 MFS transporter arabinose transport protein K08137 galP; MFS transporter, SP family, galactose:H+ symporter
D RAM_25160 MFS transporter alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D RAM_34355 MFS transporter alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D RAM_36340 MFS transporter proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D RAM_26645 major facilitator transporter K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
D RAM_21170 MFS transporter lactate transporter K08178 JEN; MFS transporter, SHS family, lactate transporter
D RAM_46640 MFS transporter benzoate transport protein K05548 benK; MFS transporter, AAHS family, benzoate transport protein
D RAM_10415 MFS transporter CP family, cyanate transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D RAM_17755 MFS transporter CP family, cyanate transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D RAM_05705 MFS transporter nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D RAM_09305 MFS transporter bicyclomycin/chloramphenicol resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RAM_25145 MFS transporter arabinose efflux permease K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D RAM_04195 MFS transporter arabinose efflux permease K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D RAM_16050 MFS transporter arabinose efflux permease K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D RAM_34770 MFS transporter arabinose efflux permease K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D RAM_04205 MFS transporter arabinose efflux permease K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D RAM_10900 major facilitator transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D RAM_22820 MFS transporter methyl viologen resistance protein SmvA K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D RAM_47765 MFS transporter methyl viologen resistance protein SmvA K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D RAM_17375 major facilitator transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D RAM_15065 MFS transporter methylenomycin A resistance protein K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein
D RAM_42820 MFS transporter methylenomycin A resistance protein K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein
D RAM_18925 MFS transporter methylenomycin A resistance protein K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein
D RAM_17635 lincomycin resistance protein K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D RAM_33430 lincomycin resistance protein K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D RAM_47585 MFS transporter multidrug efflux transporter K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D RAM_05410 MFS transporter YnfM-like transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D RAM_24055 major facilitator transporter K06902 UMF1; MFS transporter, UMF1 family
D RAM_28330 MFS transporter metabolite:H+ symporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D RAM_47770 phosphotransferase system EI component K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RAM_22930 phosphotransferase system EI component K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RAM_13850 phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RAM_22905 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RAM_13870 PTS system, glucose/maltose/N-acetylglucosamine-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D RAM_13855 PTS system, glucose/maltose/N-acetylglucosamine-specific IIC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D RAM_13865 PTS system, glucose/maltose/N-acetylglucosamine-specific IIB component K02803 nagEb; N-acetylglucosamine PTS system EIIB component [EC:2.7.1.193]
D RAM_22915 PTS system, fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D RAM_22910 PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D RAM_06950 mannose/sorbose-specific IIA subunit of PTS system K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RAM_39795 PTS system Hpr-like protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D RAM_04720 glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D RAM_25895 glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D RAM_22475 glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D RAM_05770 transmembrane cation transporter K10716 kch; voltage-gated potassium channel
D RAM_09845 ammonium transporter K03320 amt; ammonium transporter, Amt family
D RAM_00790 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D RAM_07495 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D RAM_25195 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D RAM_29365 nitrite transporter NirC K02598 nirC; nitrite transporter
D RAM_42705 large conductance mechanosensitive channel, MscL family protein K03282 mscL; large conductance mechanosensitive channel
D RAM_35005 small-conductance mechanosensitive channel K22044 ybiO; moderate conductance mechanosensitive channel
D RAM_23040 CorA-like magnesium transport protein K03284 corA; magnesium transporter
D RAM_05570 metal ion transporter MIT family protein K03284 corA; magnesium transporter
D RAM_13670 CrcB protein K06199 crcB; fluoride exporter
D RAM_13680 CrcB protein K06199 crcB; fluoride exporter
D RAM_18365 hypothetical protein K19058 merC; mercuric ion transport protein
D RAM_17455 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein
D RAM_01630 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein
D RAM_25320 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RAM_25315 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RAM_33980 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RAM_29630 OmpA-OmpF porin, OOP family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RAM_32295 gamma-aminobutyrate permease K11735 gabP; GABA permease
D RAM_10960 L-asparagine permease AnsP K11738 ansP; L-asparagine permease
D RAM_23415 L-asparagine permease AnsP K11738 ansP; L-asparagine permease
D RAM_19850 amino acid transporter K20265 gadC; glutamate:GABA antiporter
D RAM_40070 cation efflux system protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D RAM_16940 ZIP family zinc transporter K07238 TC.ZIP; zinc transporter, ZIP family
D RAM_17720 small multidrug resistance protein, SMR family K03297 emrE; small multidrug resistance pump
D RAM_17725 small multidrug resistance protein, SMR family K03297 emrE; small multidrug resistance pump
D RAM_12205 small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D RAM_45625 drug/metabolite transporter DME family protein K15268 eamA; O-acetylserine/cysteine efflux transporter
D RAM_06925 permease of the drug/metabolite transporter K15269 pecM; probable blue pigment (indigoidine) exporter
D RAM_11850 hypothetical protein K03298 TC.DME; drug/metabolite transporter, DME family
D RAM_18875 transport protein K03298 TC.DME; drug/metabolite transporter, DME family
D RAM_13145 permease K11939 rhtA; inner membrane transporter RhtA
D RAM_14415 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D RAM_05900 gluconate:H+ symporter, GntP family protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D RAM_31095 gluconate:H+ symporter, GntP family protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D RAM_10720 lactate transporter LctP family protein K03303 lutP; lactate permease
D RAM_44350 lactate transporter LctP family protein K03303 lutP; lactate permease
D RAM_23055 Ca2+/H+ antiporter K07300 chaA; Ca2+:H+ antiporter
D RAM_12655 solute/sodium (Na+) symporter K14393 actP; cation/acetate symporter
D RAM_08045 solute:Na+ symporter K14393 actP; cation/acetate symporter
D RAM_09720 aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D RAM_31140 aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D RAM_45265 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D RAM_31255 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D RAM_46645 monovalent cation:H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D RAM_26035 Na+/H+ antiporter K24160 NHA1; sodium/hydrogen antiporter
D RAM_29385 NhaP-type Na+/H+ and K+/H+ antiporter K24160 NHA1; sodium/hydrogen antiporter
D RAM_29190 sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter
D RAM_15085 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D RAM_04565 cation:proton antiporter K26731 CHX; K+:H+ antiporter
D RAM_30780 TrkA domain-containing protein K07228 khtT; K+:H+ antiporter subunit KhtT
D RAM_30785 monovalent cation:H+ antiporter-2, CPA2 family protein K26732 khtU; K+:H+ antiporter subunit KhtU
D RAM_13270 trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D RAM_13275 trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D RAM_01985 xanthine/uracil permease K24206 uacT; uric acid transporter
D RAM_43540 MFS transporter xanthine/uracil permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D RAM_23355 MFS transporter xanthine/uracil permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D RAM_29285 transport integral membrane protein K03281 clcA; chloride channel protein, CIC family
D RAM_45220 high-affinity nickel-transport protein K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D RAM_27830 sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D RAM_32325 metal ion transporter Nramp family protein K03322 mntH; manganese transport protein
D RAM_12455 arsenite-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D RAM_05970 arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D RAM_03870 arsenite efflux pump K03325 ACR3; arsenite transporter
D RAM_14705 MviN-like protein K03980 murJ; putative peptidoglycan lipid II flippase
D RAM_47940 MviN-like protein K03980 murJ; putative peptidoglycan lipid II flippase
D RAM_21530 transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D RAM_03565 lysine exporter protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D RAM_27035 branched-chain amino acid permease K26605 azlC; branched chain amino acid efflux pump
D RAM_27030 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D RAM_47740 hypothetical protein K20469 K20469; putative heme transporter
D RAM_45255 integral membrane protein K22736 VIT; vacuolar iron transporter family protein
D RAM_05605 multiple antibiotic resistance protein K05595 marC; multiple antibiotic resistance protein
D RAM_32070 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D RAM_00815 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D RAM_42135 high-affinity iron transporter K07243 FTR; high-affinity iron transporter
D RAM_38990 high-affinity iron transporter K07224 efeO; iron uptake system component EfeO
D RAM_42140 lipoprotein K07224 efeO; iron uptake system component EfeO
D RAM_38995 iron-dependent peroxidase K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D RAM_42145 iron-dependent peroxidase K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D RAM_45145 hppA; membrane-bound proton-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D RAM_02550 cytochrome c-type biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D RAM_10715 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D RAM_02530 tryptophan-rich sensory protein K05770 TSPO; translocator protein
D RAM_25230 MgtC-like protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D RAM_09775 transthyretin K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RAM_00465 putative copper resistance protein D K07245 pcoD; copper resistance protein D
D RAM_00470 copper resistance protein K07156 copC; copper resistance protein C
D RAM_21660 copper resistance protein K07156 copC; copper resistance protein C
D RAM_33525 copper resistance protein K07156 copC; copper resistance protein C
D RAM_35360 copper resistance protein K14166 ycnJ; copper transport protein
C 02044 Secretion system [BR:amn02044]
D RAM_22640 leader peptidase (prepilin peptidase)/N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RAM_36470 leader peptidase (prepilin peptidase)/N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RAM_22675 type IV pilus assembly protein PilA K02650 pilA; type IV pilus assembly protein PilA
D RAM_22665 type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D RAM_22660 type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D RAM_22670 type IV pilus assembly protein PilT K02669 pilT; twitching motility protein PilT
D RAM_45180 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RAM_45175 type II secretion system protein K12510 tadB; tight adherence protein B
D RAM_15045 hypothetical protein K02221 yggT; YggT family protein
D RAM_40285 YggT family protein K02221 yggT; YggT family protein
D RAM_34320 competence protein ComEA K02237 comEA; competence protein ComEA
D RAM_34315 competence protein ComEC K02238 comEC; competence protein ComEC
D RAM_11445 hypothetical protein K27085 eccB; ESX secretion system ATPase EccB
D RAM_03645 hypothetical protein K27085 eccB; ESX secretion system ATPase EccB
D RAM_11400 DNA segregation ATPase FtsK/SpoIIIE K27086 eccC; ESX secretion system protein EccC
D RAM_03670 DNA segregation ATPase FtsK/SpoIIIE K27086 eccC; ESX secretion system protein EccC
D RAM_11430 integral membrane protein K27087 eccD; ESX secretion system protein EccD
D RAM_03665 integral membrane protein K27087 eccD; ESX secretion system protein EccD
D RAM_03635 hypothetical protein K27088 eccE; ESX secretion system protein EccE
D RAM_03630 hypothetical protein K27088 eccE; ESX secretion system protein EccE
D RAM_03660 subtilisin-like serine protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D RAM_11340 peptidase S8 and S53, subtilisin, kexin, sedolisin K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D RAM_46580 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D RAM_25290 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D RAM_44895 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D RAM_44890 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D RAM_02735 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D RAM_47705 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D RAM_32125 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D RAM_01185 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D RAM_47815 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D RAM_31730 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D RAM_03690 hypothetical protein K14956 esx; ESAT-6 family protein
D RAM_03685 hypothetical protein K14956 esx; ESAT-6 family protein
D RAM_41705 hypothetical protein K14956 esx; ESAT-6 family protein
D RAM_41700 hypothetical protein K14956 esx; ESAT-6 family protein
D RAM_06170 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RAM_41045 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RAM_26985 preprotein translocase SecD subunit K03072 secD; preprotein translocase subunit SecD
D RAM_03035 preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D RAM_26980 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RAM_14235 preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D RAM_03570 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RAM_09910 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RAM_09675 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RAM_26990 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D RAM_48015 preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAM_39405 preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RAM_24850 sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D RAM_05440 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D RAM_24845 sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:amn02042]
D RAM_25320 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RAM_25315 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RAM_33980 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RAM_41490 hemolysin III-related protein K11068 hlyIII; hemolysin III
D RAM_16410 phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D RAM_39000 phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D RAM_45985 phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:amn02022]
D RAM_02360 two-component system histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D RAM_02365 two-component system response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3
D RAM_38930 two-component system response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3
D RAM_09620 two-component system sensor kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RAM_09625 two-component system response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RAM_42790 two-component system histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D RAM_28580 two-component system histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D RAM_18790 two-component system histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D RAM_28935 two-component system histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D RAM_42795 two-component system response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA
D RAM_28575 two-component system response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA
D RAM_18795 two-component system response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA
D RAM_28940 two-component system response regulator K07669 mprA; two-component system, OmpR family, response regulator MprA
D RAM_15320 two-component system histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D RAM_41065 two-component system histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D RAM_35470 two-component system histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D RAM_19180 two-component system histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D RAM_29255 two-component system histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D RAM_41070 two component transcriptional regulator, winged helix family protein K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D RAM_18205 two-component system response regulator K07671 prrA; two-component system, OmpR family, response regulator PrrA
D RAM_41825 two-component system histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RAM_42555 two-component system histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RAM_42550 two-component system response regulator K18352 vanRAc; two-component system, OmpR family, response regulator VanR
D RAM_08830 two-component system histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RAM_34605 two-component system histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RAM_16060 two-component system histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RAM_45805 two-component system sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RAM_08825 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D RAM_16065 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D RAM_45810 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D RAM_04570 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D RAM_25860 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D RAM_36045 two-component system response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D RAM_33870 two-component system histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D RAM_23165 two-component system histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D RAM_35335 two-component system histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D RAM_33865 two-component system response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D RAM_23160 two-component system response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D RAM_35315 two-component system response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D RAM_35330 two-component system response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D RAM_22295 two-component system sensor kinase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D RAM_28410 two-component system sensor kinase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D RAM_27890 two-component system sensor kinase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D RAM_00840 two-component system sensor kinase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D RAM_27900 two-component system response regulator K07695 devR; two-component system, NarL family, response regulator DevR
D RAM_22300 two-component system response regulator K07695 devR; two-component system, NarL family, response regulator DevR
D RAM_28420 two-component system response regulator K07695 devR; two-component system, NarL family, response regulator DevR
D RAM_00845 two-component system response regulator K07695 devR; two-component system, NarL family, response regulator DevR
D RAM_01295 two-component system histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D RAM_31135 two-component system histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D RAM_01290 two-component system response regulator K02475 K02475; two-component system, CitB family, response regulator
D RAM_00665 two-component system histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D RAM_08070 two-component system histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D RAM_20065 formyl transferase-like protein K19640 hypX; putative two-component system protein, hydrogenase maturation factor HypX/HoxX
D RAM_21040 chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAM_21045 chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAM_33375 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAM_18255 chemotaxis protein methyltransferase CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RAM_21055 chemotaxis protein methyltransferase CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RAM_40970 two-component system sensor kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D RAM_31510 two-component system response regulator K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:amn02035]
D RAM_21040 chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAM_21045 chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAM_33375 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RAM_18255 chemotaxis protein methyltransferase CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RAM_21055 chemotaxis protein methyltransferase CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RAM_10000 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D RAM_22670 type IV pilus assembly protein PilT K02669 pilT; twitching motility protein PilT
D RAM_22675 type IV pilus assembly protein PilA K02650 pilA; type IV pilus assembly protein PilA
D RAM_22665 type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D RAM_22660 type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D RAM_22640 leader peptidase (prepilin peptidase)/N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RAM_36470 leader peptidase (prepilin peptidase)/N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RAM_45180 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:amn04812]
D RAM_15025 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RAM_42525 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D RAM_25005 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D RAM_47995 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D RAM_30820 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D RAM_47990 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RAM_37450 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:amn04147]
D RAM_21625 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D RAM_41830 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAM_42110 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RAM_14220 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RAM_14225 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RAM_12555 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RAM_00175 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RAM_44165 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D RAM_32460 hypothetical protein K07192 FLOT; flotillin
D RAM_11790 band 7 domain-containing protein K07192 FLOT; flotillin
D RAM_03890 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAM_22050 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAM_34940 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAM_43905 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RAM_47010 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RAM_32940 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RAM_26330 chaperone protein DnaK-like protein K04043 dnaK; molecular chaperone DnaK
D RAM_14265 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RAM_13660 dipeptidyl-peptidase 4 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D RAM_09145 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RAM_19920 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D RAM_03940 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RAM_03950 inosine 5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RAM_03450 elongation factor EF-Tu K02358 tuf; elongation factor Tu
D RAM_21475 elongation factor Tu K02358 tuf; elongation factor Tu
D RAM_31685 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RAM_34000 protein kinase C inhibitor K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RAM_21975 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RAM_32700 Na+-dependent transporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D RAM_12435 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_02445 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_05070 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_15930 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_33180 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_36970 long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_37170 acyl-CoA synthetase-related protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RAM_08015 putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12960 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_12985 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_47360 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_41655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_19540 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_35680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_17205 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_40565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RAM_41135 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RAM_26810 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RAM_03575 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RAM_26975 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RAM_37820 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RAM_30955 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RAM_24235 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RAM_22495 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RAM_34095 phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RAM_15120 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D RAM_15730 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D RAM_07780 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D RAM_26630 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D RAM_16740 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D RAM_12285 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D RAM_13205 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RAM_04715 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RAM_22465 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RAM_22480 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RAM_13700 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_09170 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_06190 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_06235 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_11710 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_13150 glutamine synthetase-like protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RAM_02490 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RAM_41590 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RAM_41320 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RAM_14070 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RAM_08605 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RAM_04125 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RAM_10220 peptidase M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D RAM_11050 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_35575 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RAM_08405 electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D RAM_06825 glutamate dehydrogenase (NAD(P)+) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RAM_25280 glutamate dehydrogenase (NAD(P)+) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RAM_14260 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RAM_14230 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RAM_02345 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:amn02048]
D RAM_29800 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D RAM_29790 CRISPR-associated protein CSE1 K19123 casA; CRISPR system Cascade subunit CasA
D RAM_29785 CRISPR-associated protein CSE2 K19046 casB; CRISPR system Cascade subunit CasB
D RAM_29780 CRISPR-associated protein CSE4 K19124 casC; CRISPR system Cascade subunit CasC
D RAM_29775 hypothetical protein K19125 casD; CRISPR system Cascade subunit CasD
D RAM_29770 CRISPR-associated CSE3 family protein K19126 casE; CRISPR system Cascade subunit CasE
D RAM_36360 adenine-specific DNA-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D RAM_10770 adenine-specific DNA-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D RAM_01805 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAM_31530 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAM_47315 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RAM_43895 PspC family transcriptional regulator K03973 pspC; phage shock protein C
D RAM_15025 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RAM_21065 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RAM_08435 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:amn04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:amn04090]
D RAM_13660 dipeptidyl-peptidase 4 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:amn01504]
D RAM_09685 aminoglycoside 6'-N-acetyltransferase K00663 aacA; aminoglycoside 6'-N-acetyltransferase [EC:2.3.1.82]
D RAM_26650 aminoglycoside 6'-N-acetyltransferase K00663 aacA; aminoglycoside 6'-N-acetyltransferase [EC:2.3.1.82]
D RAM_05460 aminoglycoside O-phosphotransferase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D RAM_44745 ABC transporter K18233 oleC5; oleandomycin transport system permease protein
D RAM_41815 elongation factor EF-G/tetracycline resistance protein K18220 tetM; ribosomal protection tetracycline resistance protein
D RAM_25090 ABC transport system ATP-binding protein K18230 tylC; macrolide transport system ATP-binding/permease protein
D RAM_44740 multidrug ABC transporter ATPase K18232 oleC4; oleandomycin transport system ATP-binding protein
D RAM_08915 erythromycin esterase K06880 ereA_B; erythromycin esterase [EC:3.1.1.-]
D RAM_25145 MFS transporter arabinose efflux permease K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D RAM_10900 major facilitator transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D RAM_22820 MFS transporter methyl viologen resistance protein SmvA K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D RAM_47765 MFS transporter methyl viologen resistance protein SmvA K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D RAM_17375 major facilitator transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D RAM_08270 FAD-dependent oxidoreductase K21267 iri; rifampicin monooxygenase [EC:1.14.13.211]
D RAM_17855 peptidase M48 K02172 blaR1; bla regulator protein blaR1
D RAM_17605 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RAM_35715 beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RAM_26100 beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RAM_26090 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D RAM_41825 two-component system histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RAM_42555 two-component system histidine kinase K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D RAM_42550 two-component system response regulator K18352 vanRAc; two-component system, OmpR family, response regulator VanR
D RAM_22385 hypothetical protein K18353 vanJ; vancomycin resistance protein VanJ
D RAM_42570 D-lactate dehydrogenase K18347 vanH; D-specific alpha-keto acid dehydrogenase [EC:1.1.1.-]
D RAM_42565 vanB; D-alanine--D-lactate ligase K15739 vanB; D-alanine---(R)-lactate ligase [EC:6.1.2.1]
D RAM_03365 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RAM_42560 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D RAM_31970 amino acid adenylation domain-containing protein K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D RAM_37660 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D RAM_23570 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:amn00536]
D RAM_02195 membrane spanning protein K16645 hbhA; heparin binding hemagglutinin HbhA
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:amn00537]
D RAM_14070 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RAM_44165 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:amn03100]
D RAM_t48118 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAM_t48034 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAM_t48066 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RAM_t48120 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAM_t48044 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAM_t48122 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAM_t48104 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAM_t48112 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RAM_t48098 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RAM_t48050 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RAM_t48086 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RAM_t48068 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RAM_t48116 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RAM_t48048 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RAM_t48070 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RAM_t48100 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RAM_t48038 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RAM_t48084 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RAM_t48134 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RAM_t48106 tRNA-His K14226 tRNA-His; tRNA His
D RAM_t48032 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RAM_t48092 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAM_t48114 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAM_t48036 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAM_t48110 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAM_t48090 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RAM_t48046 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RAM_t48108 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RAM_t48062 tRNA-Met K14230 tRNA-Met; tRNA Met
D RAM_t48064 tRNA-Met K14230 tRNA-Met; tRNA Met
D RAM_t48058 tRNA-Met K14230 tRNA-Met; tRNA Met
D RAM_t48094 tRNA-Met K14230 tRNA-Met; tRNA Met
D RAM_t48052 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RAM_t48102 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RAM_t48078 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RAM_t48128 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RAM_t48130 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAM_t48040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAM_t48042 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAM_t48132 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RAM_t48124 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RAM_t48126 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RAM_t48056 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RAM_t48060 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RAM_t48054 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RAM_t48096 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RAM_t48074 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAM_t48072 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAM_t48082 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAM_t48076 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAM_t48088 tRNA-Val K14237 tRNA-Val; tRNA Val
D RAM_t48080 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D RAM_r48148 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAM_r48150 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAM_r48144 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAM_r48146 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RAM_r48156 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAM_r48158 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAM_r48154 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAM_r48152 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RAM_r48136 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAM_r48140 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAM_r48138 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RAM_r48142 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RAM_16620 3-hydroxyacyl-CoA dehydrogenase K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108]
D RAM_43205 Zn-dependent alcohol dehydrogenase class III K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306]
D RAM_01160 short-chain dehydrogenase K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333]
D RAM_34775 oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D RAM_11905 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D RAM_26420 aldo/keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D RAM_15250 aldo/keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D RAM_00415 L-gulonolactone oxidase K05888 K05888; L-gulono-1,4-lactone dehydrogenase [EC:1.1.2.-]
D RAM_27490 pyranose oxidase K26081 carA; C-glycoside oxidase [EC:1.1.3.50]
D RAM_42245 glucose dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D RAM_17200 flavin-dependent oxidoreductase K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2]
D RAM_01165 FAD linked oxidase-like protein K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D RAM_14790 hypothetical protein K00540 fqr; F420H(2)-dependent quinone reductase [EC:1.1.98.-]
D RAM_18575 hypothetical protein K00540 fqr; F420H(2)-dependent quinone reductase [EC:1.1.98.-]
D RAM_12745 hypothetical protein K00540 fqr; F420H(2)-dependent quinone reductase [EC:1.1.98.-]
D RAM_09520 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D RAM_09490 carbon-monoxide dehydrogenase small subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RAM_09740 carbon-monoxide dehydrogenase small subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RAM_23340 carbon-monoxide dehydrogenase small subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RAM_26715 carbon-monoxide dehydrogenase small subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RAM_09500 carbon monoxide dehydrogenase medium subunit K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D RAM_26710 carbon-monoxide dehydrogenase medium subunit K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D RAM_09495 carbon-monoxide dehydrogenase large subunit K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D RAM_26720 carbon-monoxide dehydrogenase large subunit K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D RAM_30055 indolepyruvate ferredoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D RAM_01575 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D RAM_40415 pyrroloquinoline quinone biosynthesis protein PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D RAM_15220 isoquinoline 1-oxidoreductase alpha subunit K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D RAM_15215 isoquinoline 1-oxidoreductase beta subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D RAM_33150 isoquinoline 1-oxidoreductase beta subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D RAM_02660 electron transfer oxidoreductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D RAM_12320 acyl-CoA dehydrogenase K22818 fadE26; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase alpha subunit [EC:1.3.99.-]
D RAM_12315 acyl-CoA dehydrogenase K22819 fadE27; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase beta subunit [EC:1.3.99.-]
D RAM_12720 acyl-CoA dehydrogenase K22820 fadE34; 3-oxochol-4-en-24-oyl-CoA dehydrogenase [EC:1.3.99.-]
D RAM_12755 acyl-CoA dehydrogenase K22821 fadE28; 3-oxo-4-pregnene-20-carboxyl-CoA dehydrogenase alpha subunit [EC:1.3.99.-]
D RAM_12760 acyl-CoA dehydrogenase K22822 fadE29; 3-oxo-4-pregnene-20-carboxyl-CoA dehydrogenase beta subunit [EC:1.3.99.-]
D RAM_04425 NADP oxidoreductase coenzyme F420-dependent protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D RAM_34870 reductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D RAM_34890 reductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D RAM_28690 oxidoreductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D RAM_04690 flavoprotein disulfide reductase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RAM_40800 NADPH:quinone reductase and related Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAM_47290 NADPH:quinone reductase and related Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAM_36800 NADPH:quinone reductase and related Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAM_42405 NADPH:quinone reductase and related Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAM_14320 NADPH:quinone reductase and related Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAM_20020 NADPH:quinone reductase and related Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAM_15890 NADPH:quinone reductase and related Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAM_22715 NADPH:quinone reductase and related Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAM_22500 NADPH:quinone reductase and related Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAM_18660 NADPH:quinone reductase and related Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAM_30890 NADPH:quinone reductase and related Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAM_33660 NADPH:quinone reductase and related Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAM_20290 NADPH:quinone reductase and related Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAM_24715 NADPH:quinone reductase and related Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAM_24875 NADPH:quinone reductase and related Zn-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RAM_19545 2-nitropropane dioxygenase K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D RAM_12200 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D RAM_30070 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D RAM_24775 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D RAM_10420 mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D RAM_30395 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RAM_13475 peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D RAM_22090 glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D RAM_15570 Mn-containing catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D RAM_02325 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D RAM_14605 peroxiredoxin Q/BCP K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RAM_39565 peroxiredoxin Q/BCP K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RAM_14980 osmotically inducible protein OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D RAM_38405 OsmC-like protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D RAM_45515 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D RAM_10750 alkyl hydroperoxide reductase/thiol specific antioxidant K24120 ahpE; mycoredoxin-dependent peroxiredoxin [EC:1.11.1.29]
D RAM_15360 pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RAM_16785 hypothetical protein K23117 lcp; endo-cleaving rubber dioxygenase [EC:1.13.11.87]
D RAM_34545 carotenoid cleavage dioxygenase K11159 K11159; carotenoid cleavage oxygenase [EC:1.13.11.-]
D RAM_46840 1-aminocyclopropane-1-carboxylate oxidase K21815 efe; 2-oxoglutarate dioxygenase / 2-oxoglutarate/L-arginine monooxygenase/decarboxylase [EC:1.13.12.19 1.14.20.7]
D RAM_21920 taurine dioxygenase K22303 atsK; alkyl sulfatase [EC:1.14.11.77]
D RAM_25655 lysine/ornithine N-monooxygenase K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196]
D RAM_04305 hydroxylase K22027 iacA; indole-3-acetate monooxygenase [EC:1.14.13.235]
D RAM_09635 hydroxylase K22027 iacA; indole-3-acetate monooxygenase [EC:1.14.13.235]
D RAM_13690 Lysine/ornithine N-monooxygenase K27501 alcA; putrescine N-hydroxylase [EC:1.14.13.252]
D RAM_28475 stearoyl/acyl-CoA desaturase (delta-9 desaturase) K23054 desC; sn-1 stearoyl-lipid 9-desaturase [EC:1.14.19.28]
D RAM_07125 cellulose-binding protein K22033 K22033; lytic cellulose monooxygenase (C4-dehydrogenating) [EC:1.14.99.56]
D RAM_15835 cellulose/chitin-binding protein K22033 K22033; lytic cellulose monooxygenase (C4-dehydrogenating) [EC:1.14.99.56]
D RAM_44680 antibiotic biosynthesis monooxygenase K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57]
D RAM_00230 ferredoxin--NADP+ reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D RAM_17295 ferredoxin--NADP+ reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D RAM_41420 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D RAM_10260 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D RAM_45370 glutaredoxin-like protein K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D RAM_03865 heavy metal reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RAM_40425 pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D RAM_43630 hypothetical protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D RAM_18130 short-chain dehydrogenase/reductase K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D RAM_14590 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D RAM_15000 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D RAM_23005 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D RAM_33785 trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D RAM_16485 methyltransferase K16217 gppmt; geranyl diphosphate 2-C-methyltransferase [EC:2.1.1.255]
D RAM_45490 carbamoyl transferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D RAM_18485 carbamoyl transferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D RAM_21765 carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D RAM_01955 arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D RAM_43520 N-hydroxyarylamine O-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D RAM_46200 acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D RAM_06455 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D RAM_24090 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D RAM_34330 hypothetical protein K22797 octT; diglucosylglycerate octanoyltransferase [EC:2.3.1.273]
D RAM_40875 GNAT family acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D RAM_43560 glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D RAM_02330 glycosyl transferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D RAM_21790 glycosyl transferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D RAM_15680 NCAIR mutase (PurE)-related protein K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D RAM_11730 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RAM_08810 thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RAM_30470 thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RAM_18775 thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RAM_08895 dihydroxyacetone kinase K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D RAM_06225 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D RAM_27645 pyruvate phosphate dikinase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D RAM_23280 formyl-coenzyme A transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D RAM_12490 carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D RAM_19035 esterase/lipase K05972 AXE1; acetylxylan esterase [EC:3.1.1.72]
D RAM_25050 phosphotriesterase-family protein K23149 E3.1.1.104; 5-phospho-D-xylono-1,4-lactonase [EC:3.1.1.104]
D RAM_39425 hypothetical protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D RAM_15455 carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D RAM_07480 carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D RAM_45365 carboxyesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D RAM_31245 carboxylesterase type B K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D RAM_06230 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RAM_01720 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RAM_35030 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RAM_25180 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RAM_27745 hypothetical protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D RAM_46445 protein tyrosine/serine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D RAM_34335 phosphoglycerate mutase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D RAM_05600 metal-dependent phosphoesterase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D RAM_36050 phosphoesterase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D RAM_01670 phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D RAM_42370 Mg-dependent DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RAM_39835 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-]
D RAM_07050 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D RAM_20365 beta-1,4-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D RAM_20415 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D RAM_22985 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D RAM_32975 glycosyl hydrolase/beta-1,4-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D RAM_25790 glycosyl hydrolase/beta-1,4-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D RAM_16720 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D RAM_30165 glycosyl hydrolase/beta-1,4-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D RAM_38110 arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D RAM_18710 arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D RAM_22605 arabinan endo-1,5-alpha-L-arabinosidase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D RAM_18725 arabinan endo-1,5-alpha-L-arabinosidase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D RAM_11435 O-glycosyl hydrolase K15924 xynC; glucuronoarabinoxylan endo-1,4-beta-xylanase [EC:3.2.1.136]
D RAM_20985 alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139]
D RAM_26385 endo-1,4-beta-glucanase K18578 CEL74A; xyloglucan-specific exo-beta-1,4-glucanase [EC:3.2.1.155]
D RAM_43615 carbohydrate-binding protein K18578 CEL74A; xyloglucan-specific exo-beta-1,4-glucanase [EC:3.2.1.155]
D RAM_07775 unsaturated glucuronyl hydrolase K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D RAM_22115 family 31 glucosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D RAM_07740 unsaturated glucuronyl hydrolase K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180]
D RAM_16340 beta-lactamase class C K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D RAM_14065 beta-lactamase class C K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D RAM_18605 beta-lactamase class C K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D RAM_31090 N-acyl-D-amino-acid deacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D RAM_11885 polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RAM_43980 polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RAM_34450 penicillin amidase family protein K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D RAM_41220 LmbE family protein K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D RAM_30670 putative polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D RAM_22990 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D RAM_00720 mycothiol conjugate amidase Mca K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D RAM_41565 mycothiol conjugate amidase Mca K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D RAM_11460 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D RAM_09745 hydroxydechloroatrazine ethylaminohydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D RAM_05800 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RAM_25205 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RAM_32145 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RAM_46470 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D RAM_12775 lipid-transfer protein K25623 ltp2; 17-hydroxy-3-oxo-4-pregnene-20-carboxyl-CoA lyase [EC:4.1.3.-]
D RAM_30185 carbohydrate kinase family protein K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D RAM_03760 ribokinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RAM_12765 hypothetical protein K25621 chsH2; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase alpha subunit [EC:4.2.1.-]
D RAM_12770 hypothetical protein K25622 chsH1; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase beta subunit [EC:4.2.1.-]
D RAM_30620 hyaluronate lyase K01727 hysA; hyaluronate lyase [EC:4.2.2.1]
D RAM_38095 hypothetical protein K18197 yesW; rhamnogalacturonan endolyase [EC:4.2.2.23]
D RAM_16480 terpene synthase K16218 mibs; 2-methylisoborneol synthase [EC:4.2.3.118]
D RAM_44045 threonine dehydratase K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16]
D RAM_15675 ExsB family protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D RAM_13730 alkylmercury lyase K00221 E4.99.1.2; alkylmercury lyase [EC:4.99.1.2]
D RAM_23135 L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D RAM_20160 hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D RAM_00300 peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D RAM_14315 peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D RAM_19040 N-acylglucosamine 2-epimerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31]
D RAM_26425 N-acylglucosamine 2-epimerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31]
D RAM_12700 methylmalonyl-CoA mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D RAM_13005 acyl-CoA synthetase K18688 fadD19; 3-oxocholest-4-en-26-oate---CoA ligase [EC:6.2.1.42]
D RAM_19765 fatty-acyl-CoA synthase K18688 fadD19; 3-oxocholest-4-en-26-oate---CoA ligase [EC:6.2.1.42]
D RAM_43125 acyl-CoA synthetase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48]
D RAM_35345 hypothetical protein K24411 patD; oxazoline/thiazoline synthase [EC:6.2.2.2 6.2.2.3]
D RAM_30510 hypothetical protein K24411 patD; oxazoline/thiazoline synthase [EC:6.2.2.2 6.2.2.3]
D RAM_25095 cysteinyl-tRNA synthetase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D RAM_14675 acetyl/propionyl-CoA carboxylase, carboxyltransferase subunit K01970 accD2; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D RAM_03800 acetyl/propionyl-CoA carboxylase, carboxyltransferase subunit K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D RAM_14680 acyl-CoA carboxylase alpha chain K27596 accA2; acyl-CoA carboxylase subunit alpha [EC:6.4.1.-]
D RAM_16345 transport ATPase K12955 ctpI; cation-transporting P-type ATPase I [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D RAM_12300 acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC
D RAM_22950 beta-glucosidase K17641 bxlA; beta-xylosidase
D RAM_20215 rare lipoprotein A K20628 exlX; expansin
C 99982 Energy metabolism
D RAM_34540 FdhD protein K02379 fdhD; FdhD protein
D RAM_23255 formate dehydrogenase accessory protein K02379 fdhD; FdhD protein
D RAM_30455 hypothetical protein K05337 fer; ferredoxin
D RAM_12325 ferredoxin K05337 fer; ferredoxin
D RAM_12895 ferredoxin K05337 fer; ferredoxin
D RAM_36855 ferredoxin K05337 fer; ferredoxin
D RAM_36005 hypothetical protein K05337 fer; ferredoxin
D RAM_36025 ferredoxin K05337 fer; ferredoxin
D RAM_38220 ferredoxin K05337 fer; ferredoxin
D RAM_14400 nitrogen fixation protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
D RAM_08400 electron transfer flavoprotein beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D RAM_23990 acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
D RAM_34325 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D RAM_46835 glyoxalase/bleomycin resistance protein/dioxygenase K08234 yaeR; glyoxylase I family protein
D RAM_15035 pyridoxal-5'-phosphate dependent enzyme class III K06997 yggS; PLP dependent protein
D RAM_45235 acetyltransferase K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D RAM_43720 hypothetical protein K21687 rpfA; resuscitation-promoting factor RpfA
D RAM_24050 transglycosylase K21687 rpfA; resuscitation-promoting factor RpfA
D RAM_42365 transglycosylase K21688 rpfB; resuscitation-promoting factor RpfB
D RAM_01090 integral membrane protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D RAM_14425 ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein
D RAM_36555 hypothetical protein K24695 mftB; mycofactocin biosynthesis protein MftB
C 99988 Secondary metabolism
D RAM_42160 pyridoxamine 5'-phosphate oxidase K05558 K05558; pyridoxamine 5'-phosphate oxidase family protein
D RAM_01710 serine/threonine protein kinase K24914 ramC; probable SapB synthase
C 99999 Others
D RAM_05100 DoxX family protein K15977 K15977; putative oxidoreductase
D RAM_08545 hypothetical protein K15977 K15977; putative oxidoreductase
D RAM_26135 integral membrane protein K15977 K15977; putative oxidoreductase
D RAM_36975 hypothetical protein K15977 K15977; putative oxidoreductase
D RAM_39440 integral membrane protein K15977 K15977; putative oxidoreductase
D RAM_19630 hypothetical protein K15977 K15977; putative oxidoreductase
D RAM_47365 DoxX family protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RAM_01740 cold shock protein CspA K03704 cspA; cold shock protein
D RAM_23000 cold shock protein CspA K03704 cspA; cold shock protein
D RAM_43575 cold shock protein CspA K03704 cspA; cold shock protein
D RAM_43915 cold shock protein K03704 cspA; cold shock protein
D RAM_29145 cold shock protein CspA K03704 cspA; cold shock protein
D RAM_07875 transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D RAM_39650 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D RAM_34585 trigger factor K03545 tig; trigger factor
D RAM_12900 hypothetical protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D RAM_43360 urease accessory protein UreG K03189 ureG; urease accessory protein
D RAM_43355 urease accessory protein UreD K03190 ureD; urease accessory protein
D RAM_06360 SsrA-binding protein K03664 smpB; SsrA-binding protein
D RAM_19290 hydrogenase assembly chaperone HypC/HupF K04653 hypC; hydrogenase expression/formation protein HypC
D RAM_19335 hypothetical protein K04653 hypC; hydrogenase expression/formation protein HypC
D RAM_19285 hydrogenase isoenzymes formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D RAM_19280 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D RAM_19265 hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D RAM_09980 magnesium chelatase family protein K07391 comM; magnesium chelatase family protein
D RAM_29565 thioredoxin K07396 K07396; putative protein-disulfide isomerase
D RAM_02555 cytochrome C biogenesis protein K07399 resB; cytochrome c biogenesis protein
D RAM_09485 xanthine dehydrogenase accessory factor K07402 xdhC; xanthine dehydrogenase accessory factor
D RAM_27090 xanthine dehydrogenase accessory factor K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D RAM_05750 DNA-methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D RAM_41375 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D RAM_09975 endonuclease K07460 yraN; putative endonuclease
D RAM_24995 RecB family exonuclease K07465 K07465; putative RecB family exonuclease
D RAM_09990 DNA processing protein K04096 smf; DNA processing protein
D RAM_13770 recombination factor protein RarA K07478 ycaJ; putative ATPase
D RAM_45745 transposase K07483 K07483; transposase
D RAM_39735 transposase K07483 K07483; transposase
D RAM_25715 transposase IS3/IS911 family protein K07483 K07483; transposase
D RAM_29810 transposase IS3/IS911 family protein K07483 K07483; transposase
D RAM_37655 transposase IS3/IS911 family protein K07483 K07483; transposase
D RAM_28130 transposase IS3/IS911 family protein K07483 K07483; transposase
D RAM_40135 transposase IS3/IS911 family protein K07483 K07483; transposase
D RAM_40645 transposase IS3/IS911 family protein K07483 K07483; transposase
D RAM_07370 transposase IS3/IS911 family protein K07483 K07483; transposase
D RAM_07310 transposase IS3/IS911 family protein K07483 K07483; transposase
D RAM_07525 transposase K07486 K07486; transposase
D RAM_25720 integrase catalytic subunit K07497 K07497; putative transposase
D RAM_39740 IS3 family transposase K07497 K07497; putative transposase
D RAM_45740 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D RAM_32210 phage shock protein A K03969 pspA; phage shock protein A
D RAM_11425 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
D RAM_45720 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RAM_13020 basic amino acid/polyamine antiporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D RAM_13160 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D RAM_41150 basic amino acid/polyamine antiporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D RAM_34230 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D RAM_35625 basic amino acid/polyamine antiporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D RAM_13105 hydrophobic/amphiphilic exporter-1 (mainly G-bacteria), HAE1 family protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D RAM_45260 proton-dependent oligopeptide transporter POT family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D RAM_27725 proton-dependent oligopeptide transporter POT family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D RAM_06460 inorganic phosphate transporter PiT family protein K03306 TC.PIT; inorganic phosphate transporter, PiT family
D RAM_06220 inorganic phosphate transporter PiT family protein K03306 TC.PIT; inorganic phosphate transporter, PiT family
D RAM_21805 inorganic phosphate transporter PiT family protein K03306 TC.PIT; inorganic phosphate transporter, PiT family
D RAM_13330 solute:Na+ symporter, SSS family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D RAM_47405 solute:Na+ symporter, SSS family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D RAM_39820 solute:Na+ symporter, SSS family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D RAM_09665 solute:sodium symporter, SSS family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D RAM_07805 cytosine permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D RAM_30855 nucleobase:cation symporter-1, NCS1 family protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D RAM_34085 cytosine/purines/uracil/thiamine/allantoin permease family protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D RAM_46140 permease for cytosine/purines uracil thiamine allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
C 99978 Cell growth
D RAM_06050 putative ATP-binding protein K07321 cooC; CO dehydrogenase maturation factor
D RAM_48010 spoIIIJ-associated protein K06346 jag; spoIIIJ-associated protein
D RAM_13090 sporulation-control protein K06377 spo0M; sporulation-control protein
C 99993 Cell motility
C 99995 Signaling proteins
D RAM_41255 GTP-binding protein TypA K06207 typA; GTP-binding protein
D RAM_33990 phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D RAM_41480 PhoH-like ATPase K07175 phoH2; PhoH-like ATPase
D RAM_02965 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D RAM_18400 lysozyme K07273 acm; lysozyme
D RAM_44285 gas vesicle structural protein K23262 gvpA; gas vesicle structural protein
C 99994 Others
D RAM_15365 hypothetical protein K02039 phoU; phosphate transport system protein
D RAM_46175 phosphate transport system protein K02039 phoU; phosphate transport system protein
D RAM_16205 tellurite resistance protein TerC K05794 terC; tellurite resistance protein TerC
D RAM_31310 tellurite resistance protein TerC K05794 terC; tellurite resistance protein TerC
D RAM_26325 periplasmic divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D RAM_43850 copper homeostasis protein K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RAM_10440 ElaA protein K02348 elaA; ElaA protein
D RAM_35865 hypothetical protein K04477 ycdX; putative hydrolase
D RAM_40430 pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D RAM_40420 pyrroloquinoline quinone biosynthesis protein D K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D RAM_45150 DEAD/DEAH box helicase-like protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D RAM_12530 oxygen-binding heme protein K06886 glbN; hemoglobin
D RAM_35010 oxygen-binding heme protein K06886 glbN; hemoglobin
D RAM_21450 oxygen-binding heme protein K06886 glbN; hemoglobin
D RAM_11500 drug exporter of the RND superfamily protein K06994 K06994; putative drug exporter of the RND superfamily
D RAM_17110 integral membrane export protein K06994 K06994; putative drug exporter of the RND superfamily
D RAM_42505 transmembrane exporter K06994 K06994; putative drug exporter of the RND superfamily
D RAM_26215 putative drug exporter of the RND superfamily K06994 K06994; putative drug exporter of the RND superfamily
D RAM_40550 integral membrane export protein K06994 K06994; putative drug exporter of the RND superfamily
D RAM_01250 patatin-like phospholipase K07001 K07001; NTE family protein
D RAM_10990 patatin-like phospholipase K07001 K07001; NTE family protein
D RAM_00325 patatin-like phospholipase K07001 K07001; NTE family protein
D RAM_08635 hydrolase of the HAD superfamily protein K07025 K07025; putative hydrolase of the HAD superfamily
D RAM_46550 hydrolase of the HAD superfamily protein K07025 K07025; putative hydrolase of the HAD superfamily
D RAM_14380 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D RAM_14385 Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D RAM_15935 phosphotriesterase PHP K07048 PTER; phosphotriesterase-related protein
D RAM_04300 tRNA-processing ribonuclease BN K07058 K07058; membrane protein
D RAM_13110 ribonuclease BN K07058 K07058; membrane protein
D RAM_12980 tRNA-processing ribonuclease BN K07058 K07058; membrane protein
D RAM_20795 ribonuclease BN K07058 K07058; membrane protein
D RAM_21835 ribonuclease K07058 K07058; membrane protein
D RAM_21670 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D RAM_28445 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D RAM_47305 FxsA cytoplasmic membrane protein K07113 fxsA; UPF0716 protein FxsA
D RAM_00160 hypothetical protein K07146 K07146; UPF0176 protein
D RAM_15430 PhnB protein K04750 phnB; PhnB protein
D RAM_15665 PhnB protein K04750 phnB; PhnB protein
D RAM_40775 glyoxalase/bleomycin resistance protein/dioxygenase K04750 phnB; PhnB protein
D RAM_33310 DedA-like membrane protein K03975 dedA; membrane-associated protein
D RAM_46790 DedA-like membrane protein K03975 dedA; membrane-associated protein
D RAM_46830 membrane-associated protein K03975 dedA; membrane-associated protein
D RAM_42225 DedA-like membrane protein K03975 dedA; membrane-associated protein
D RAM_02300 DedA-like membrane protein K03975 dedA; membrane-associated protein
D RAM_10995 DedA-like membrane protein K03975 dedA; membrane-associated protein
D RAM_31430 hypothetical protein K01421 yhgE; putative membrane protein
D RAM_09365 hypothetical protein K00389 yidH; putative membrane protein
D RAM_32540 putative membrane protein K08981 K08981; putative membrane protein
D RAM_40330 hypothetical protein K08981 K08981; putative membrane protein
D RAM_27820 hypothetical protein K08982 K08982; putative membrane protein
D RAM_11635 hypothetical protein K08987 K08987; putative membrane protein
D RAM_26955 hypothetical protein K08987 K08987; putative membrane protein
D RAM_31230 hypothetical protein K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D RAM_41930 Fe-S oxidoreductase K06871 K06871; uncharacterized protein
D RAM_41535 hypothetical protein K06888 K06888; uncharacterized protein
D RAM_05080 alpha/beta hydrolase-related protein K06889 K06889; uncharacterized protein
D RAM_13830 hypothetical protein K06889 K06889; uncharacterized protein
D RAM_44510 hypothetical protein K06889 K06889; uncharacterized protein
D RAM_42000 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D RAM_29555 hypothetical protein K06893 K06893; uncharacterized protein
D RAM_31250 hypothetical protein K06893 K06893; uncharacterized protein
D RAM_28050 hypothetical protein K06893 K06893; uncharacterized protein
D RAM_47090 hypothetical protein K06893 K06893; uncharacterized protein
D RAM_39905 hypothetical protein K06893 K06893; uncharacterized protein
D RAM_24600 phage baseplate lysozyme K06903 W; Bacteriophage baseplate protein W
D RAM_24650 phage tail sheath protein K06907 FI; Bacteriophage tail sheath protein
D RAM_32260 hypothetical protein K06926 K06926; uncharacterized protein
D RAM_09805 CoA-binding protein K06929 K06929; uncharacterized protein
D RAM_44270 CoA-binding protein K06929 K06929; uncharacterized protein
D RAM_12680 ATP/GTP-binding protein K06945 K06945; uncharacterized protein
D RAM_43775 ATP/GTP-binding protein K06945 K06945; uncharacterized protein
D RAM_26835 ATP/GTP-binding protein K06945 K06945; uncharacterized protein
D RAM_32830 ATP/GTP-binding protein K06945 K06945; uncharacterized protein
D RAM_39445 ATP/GTP-binding protein K06945 K06945; uncharacterized protein
D RAM_45765 ATP/GTP-binding protein K06945 K06945; uncharacterized protein
D RAM_07265 ATP/GTP-binding protein K06945 K06945; uncharacterized protein
D RAM_44600 HD superfamily hydrolase K06950 K06950; uncharacterized protein
D RAM_15005 amine oxidase K06954 K06954; uncharacterized protein
D RAM_09935 hypothetical protein K06960 K06960; uncharacterized protein
D RAM_06725 acetyltransferase K06975 K06975; uncharacterized protein
D RAM_10375 acetyltransferase K06976 K06976; uncharacterized protein
D RAM_07430 X-Pro dipeptidyl-peptidase K06978 K06978; uncharacterized protein
D RAM_10945 peptidase S15 K06978 K06978; uncharacterized protein
D RAM_27215 X-Pro dipeptidyl-peptidase K06978 K06978; uncharacterized protein
D RAM_33215 hydrolase K06978 K06978; uncharacterized protein
D RAM_33220 acyl esterase K06978 K06978; uncharacterized protein
D RAM_37035 X-Pro dipeptidyl-peptidase K06978 K06978; uncharacterized protein
D RAM_24325 X-Pro dipeptidyl-peptidase K06978 K06978; uncharacterized protein
D RAM_17265 X-Pro dipeptidyl-peptidase K06978 K06978; uncharacterized protein
D RAM_21815 peptidase S15 K06978 K06978; uncharacterized protein
D RAM_46455 deacetylase K06986 K06986; uncharacterized protein
D RAM_17250 glyoxalase/bleomycin resistance protein/dioxygenase K06991 K06991; uncharacterized protein
D RAM_04930 glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein
D RAM_04710 glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein
D RAM_10035 glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein
D RAM_36175 glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein
D RAM_30605 glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein
D RAM_31350 glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein
D RAM_45920 endonuclease/exonuclease/phosphatase family protein K07004 K07004; uncharacterized protein
D RAM_08835 hypothetical protein K07005 K07005; uncharacterized protein
D RAM_27980 hypothetical protein K07005 K07005; uncharacterized protein
D RAM_11590 pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein
D RAM_30700 flavin-nucleotide-binding protein K07006 K07006; uncharacterized protein
D RAM_40990 alpha/beta hydrolase K07020 K07020; uncharacterized protein
D RAM_46755 metal-dependent hydrolase K07044 K07044; uncharacterized protein
D RAM_06365 hypothetical protein K07045 K07045; uncharacterized protein
D RAM_11720 amidohydrolase K07045 K07045; uncharacterized protein
D RAM_22035 amidohydrolase K07045 K07045; uncharacterized protein
D RAM_28400 amidohydrolase/decarboxylase K07045 K07045; uncharacterized protein
D RAM_16615 amidohydrolase K07045 K07045; uncharacterized protein
D RAM_44180 amidohydrolase K07045 K07045; uncharacterized protein
D RAM_01240 metallopeptidase K07054 K07054; uncharacterized protein
D RAM_05780 metalloprotease K07054 K07054; uncharacterized protein
D RAM_05825 metallopeptidase K07054 K07054; uncharacterized protein
D RAM_12215 hypothetical protein K07054 K07054; uncharacterized protein
D RAM_46795 hypothetical protein K07064 K07064; uncharacterized protein
D RAM_19700 hypothetical protein K07068 K07068; uncharacterized protein
D RAM_12995 hypothetical protein K07068 K07068; uncharacterized protein
D RAM_19615 hypothetical protein K07068 K07068; uncharacterized protein
D RAM_11035 NAD-dependent nucleoside-diphosphate sugar epimerase K07071 K07071; uncharacterized protein
D RAM_37940 NAD-dependent nucleoside-diphosphate sugar epimerase K07071 K07071; uncharacterized protein
D RAM_17920 NAD-dependent nucleoside-diphosphate sugar epimerase K07071 K07071; uncharacterized protein
D RAM_22700 NAD-dependent nucleoside-diphosphate sugar epimerase K07071 K07071; uncharacterized protein
D RAM_19795 putative FAD-binding dehydrogenase K07077 K07077; uncharacterized protein
D RAM_11070 TRAP transport system solute receptor K07080 K07080; uncharacterized protein
D RAM_12035 TRAP transport system solute receptor K07080 K07080; uncharacterized protein
D RAM_25175 TRAP transport system solute receptor K07080 K07080; uncharacterized protein
D RAM_27180 integral membrane protein K07089 K07089; uncharacterized protein
D RAM_17735 permease K07089 K07089; uncharacterized protein
D RAM_33925 permease K07089 K07089; uncharacterized protein
D RAM_01370 hypothetical protein K07090 K07090; uncharacterized protein
D RAM_26725 hypothetical protein K07090 K07090; uncharacterized protein
D RAM_47580 phosphatase K07093 K07093; uncharacterized protein
D RAM_35870 phosphoesterase K07095 K07095; uncharacterized protein
D RAM_39415 metallophosphoesterase K07098 K07098; uncharacterized protein
D RAM_45435 metallophosphoesterase K07098 K07098; uncharacterized protein
D RAM_45230 purine phosphoribosyltransferase K07101 K07101; uncharacterized protein
D RAM_20675 hypothetical protein K07118 K07118; uncharacterized protein
D RAM_42305 NAD-dependent epimerase/dehydratase K07118 K07118; uncharacterized protein
D RAM_11565 short-chain dehydrogenase K07124 K07124; uncharacterized protein
D RAM_26045 short-chain dehydrogenase K07124 K07124; uncharacterized protein
D RAM_18125 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D RAM_46940 short-chain dehydrogenase/reductase K07124 K07124; uncharacterized protein
D RAM_29165 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D RAM_01420 TPR repeat-containing protein K07126 K07126; uncharacterized protein
D RAM_16145 roadblock/LC7 family protein K07131 K07131; uncharacterized protein
D RAM_12670 roadblock/LC7 family protein K07131 K07131; uncharacterized protein
D RAM_38380 roadblock/LC7 family protein K07131 K07131; uncharacterized protein
D RAM_45775 roadblock/LC7 family protein K07131 K07131; uncharacterized protein
D RAM_43770 roadblock/LC7 family protein K07131 K07131; uncharacterized protein
D RAM_43785 roadblock/LC7 family protein K07131 K07131; uncharacterized protein
D RAM_26845 roadblock/LC7 family protein K07131 K07131; uncharacterized protein
D RAM_40505 roadblock/LC7 family protein K07131 K07131; uncharacterized protein
D RAM_46475 MOSC domain-containing protein beta barrel domain-containing protein K07140 K07140; MOSC domain-containing protein
D RAM_11315 ATP-dependent protease Lon K07157 K07157; uncharacterized protein
D RAM_09480 VWA domain containing CoxE-like protein K07161 K07161; uncharacterized protein
D RAM_15260 VWA domain containing CoxE-like protein K07161 K07161; uncharacterized protein
D RAM_05955 Zn-ribbon protein K07164 K07164; uncharacterized protein
D RAM_48020 hypothetical protein K08998 K08998; uncharacterized protein
D RAM_25395 hypothetical protein K08999 K08999; uncharacterized protein
D RAM_21270 hypothetical protein K08999 K08999; uncharacterized protein
D RAM_42100 hypothetical protein K09009 K09009; uncharacterized protein
D RAM_06325 hypothetical protein K09118 K09118; uncharacterized protein
D RAM_13675 hypothetical protein K09137 K09137; uncharacterized protein
D RAM_31375 hypothetical protein K09146 K09146; uncharacterized protein
D RAM_31205 hypothetical protein K09164 K09164; uncharacterized protein
D RAM_40325 hypothetical protein K09167 K09167; uncharacterized protein
D RAM_15010 hypothetical protein K09701 K09701; uncharacterized protein
D RAM_27010 hypothetical protein K09705 K09705; uncharacterized protein
D RAM_32330 hypothetical protein K09707 K09707; uncharacterized protein
D RAM_41465 hypothetical protein K09763 K09763; uncharacterized protein
D RAM_32495 hypothetical protein K09764 K09764; uncharacterized protein
D RAM_30445 hypothetical protein K09780 K09780; uncharacterized protein
D RAM_46770 hypothetical protein K09780 K09780; uncharacterized protein
D RAM_41175 hypothetical protein K09791 K09791; uncharacterized protein
D RAM_10505 hypothetical protein K09861 K09861; uncharacterized protein
D RAM_45465 hypothetical protein K09919 K09919; uncharacterized protein
D RAM_32350 hypothetical protein K09927 K09927; uncharacterized protein
D RAM_13460 hypothetical protein K09930 K09930; uncharacterized protein
D RAM_42755 hypothetical protein K09931 K09931; uncharacterized protein
D RAM_17345 hypothetical protein K09955 K09955; uncharacterized protein
D RAM_17360 hypothetical protein K09955 K09955; uncharacterized protein
D RAM_20325 hypothetical protein K09955 K09955; uncharacterized protein
D RAM_11595 hypothetical protein K09957 K09957; uncharacterized protein
D RAM_08345 hypothetical protein K09958 K09958; uncharacterized protein
D RAM_13400 hypothetical protein K09967 K09967; uncharacterized protein
D RAM_13405 hypothetical protein K09967 K09967; uncharacterized protein
D RAM_02175 hypothetical protein K09981 K09981; uncharacterized protein
D RAM_21545 hypothetical protein K09990 K09990; uncharacterized protein
D RAM_34760 hypothetical protein K09992 K09992; uncharacterized protein
D RAM_21800 hypothetical protein K07220 K07220; uncharacterized protein
D RAM_32505 hypothetical protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 24, 2024