+D GENES KO
#
KEGG Orthology (KO) - Amycolatopsis sp. YIM 10
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:amyy00010]
D YIM_14120 glkA2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D YIM_03080 glkA1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D YIM_18070 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D YIM_14165 pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D YIM_05250 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D YIM_46760 fba2; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YIM_03085 fba1; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YIM_24180 fbaA; putative fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YIM_18035 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D YIM_18025 gapA; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D YIM_18030 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D YIM_45450 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YIM_31770 pspA2; Phosphoserine phosphatase 1 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YIM_04820 eno1; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YIM_33545 eno2; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YIM_14190 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YIM_16260 aceE2; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YIM_12030 aceE1; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YIM_33085 pdhC1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YIM_35285 acoC1; Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YIM_12215 dlaT; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YIM_10820 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_12220 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_44985 korA2; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D YIM_21750 korA1; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D YIM_44990 korB2; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D YIM_21745 korB1; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D YIM_29540 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D YIM_23800 adh1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D YIM_46020 adhA; putative formaldehyde dehydrogenase AdhA K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D YIM_43195 aldA4; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_06090 ald2; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21910 geoB1; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21995 geoB2; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_23080 puuC1; Aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_30345 geoB3; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_04560 thcA; EPTC-inducible aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D YIM_02300 acsA2; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_22955 acsA4; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_27790 acsA5; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_32790 acsA6; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_01380 succinyl-CoA synthetase subunit alpha K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D YIM_23465 hypothetical protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D YIM_03905 galM1; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D YIM_26525 galM2; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D YIM_31245 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D YIM_47400 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D YIM_21270 licH1; putative 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YIM_28055 licH2; putative 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YIM_17735 crr; Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:amyy00020]
D YIM_03835 citA; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D YIM_03930 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D YIM_23285 dmdA; 2,3-dimethylmalate dehydratase large subunit K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D YIM_27630 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D YIM_43455 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D YIM_05720 kgd; Multifunctional 2-oxoglutarate metabolism enzyme K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D YIM_10820 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_12220 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_44985 korA2; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D YIM_21750 korA1; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D YIM_44990 korB2; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D YIM_21745 korB1; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D YIM_43615 sucD2; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D YIM_19000 sucD1; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D YIM_43620 sucC2; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D YIM_18995 sucC1; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D YIM_43320 sdhA2; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YIM_13125 sdhA1; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YIM_19355 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YIM_43325 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YIM_13130 frdB1; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YIM_19350 frdB2; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YIM_43310 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D YIM_19360 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D YIM_43315 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D YIM_14595 fumA; Fumarate hydratase class I, aerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D YIM_05235 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D YIM_24290 mdh1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YIM_39790 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D YIM_47400 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D YIM_16260 aceE2; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YIM_12030 aceE1; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YIM_33085 pdhC1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YIM_35285 acoC1; Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YIM_12215 dlaT; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:amyy00030]
D YIM_18070 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D YIM_18065 zwf2; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D YIM_10455 zwf1; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D YIM_18055 pgl1; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D YIM_31585 pgl2; 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D YIM_01870 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D YIM_00020 gntZ; 6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D YIM_17920 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D YIM_18080 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_12630 fas1; Ferredoxin fas2 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_12635 fas2; putative 33.6 kDa protein in fasciation locus precursor K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_20535 dxs1; 1-deoxy-D-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_20550 dxs2; 1-deoxy-D-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_20555 tktB1; Transketolase 2 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_30010 dxs3; 1-deoxy-D-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_30015 tktB2; Transketolase 2 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_18075 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D YIM_39020 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D YIM_41190 ywlF; Putative sugar phosphate isomerase YwlF K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D YIM_14865 xfp1; Xylulose-5-phosphate/fructose-6-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D YIM_22245 xfp2; Xylulose-5-phosphate/fructose-6-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D YIM_43190 deoC; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D YIM_48065 rbsK3; Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D YIM_20705 rbsK1; Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D YIM_04725 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D YIM_13110 edd; Phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D YIM_13105 eda; KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D YIM_09545 gnl1; Gluconolactonase precursor K01053 gnl; gluconolactonase [EC:3.1.1.17]
D YIM_41900 gntK2; Thermoresistant gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D YIM_19955 gntK1; Thermoresistant gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D YIM_20045 kdgK2; 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D YIM_31565 kdgK4; 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D YIM_32435 kdgK5; 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D YIM_46760 fba2; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YIM_03085 fba1; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YIM_24180 fbaA; putative fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YIM_05250 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D YIM_14165 pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:amyy00040]
D YIM_16235 pelA1; Pectate lyase A precursor K22539 PLY; pectate lyase [EC:4.2.2.2]
D YIM_15815 pel; Pectate trisaccharide-lyase precursor K01728 pel; pectate lyase [EC:4.2.2.2]
D YIM_34970 pelA2; Pectate trisaccharide-lyase precursor K01728 pel; pectate lyase [EC:4.2.2.2]
D YIM_23210 uxuA; Mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D YIM_29080 rspA2; Starvation-sensing protein RspA K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D YIM_20025 rspA1; Starvation-sensing protein RspA K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D YIM_32455 rspA3; Starvation-sensing protein RspA K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D YIM_39805 mtlK3; Mannitol 2-dehydrogenase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D YIM_20030 mtlK1; Mannitol 2-dehydrogenase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D YIM_32450 mtlK2; Mannitol 2-dehydrogenase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D YIM_32610 uidA4; Beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D YIM_00490 tuaD1; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YIM_33415 tuaD2; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YIM_04445 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YIM_17920 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D YIM_16790 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D YIM_43900 xylB3; Xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D YIM_31815 xylB2; Xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D YIM_36355 xylA2; Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D YIM_06185 xylA1; Xylose isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D YIM_18665 rhaB; Rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D YIM_43915 gutB4; Sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D YIM_10440 gutB1; Sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D YIM_20035 gutB2; Sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D YIM_41220 lsrK; Autoinducer 2 kinase LsrK K22935 XK1; D-ribulokinase [EC:2.7.1.47]
D YIM_02805 fucK; L-fuculokinase K22935 XK1; D-ribulokinase [EC:2.7.1.47]
D YIM_31820 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D YIM_41175 fucA2; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:amyy00051]
D YIM_19770 manA2; Mannan endo-1,4-beta-mannosidase precursor K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D YIM_03925 kdgK1; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D YIM_09100 yvyI; Putative mannose-6-phosphate isomerase YvyI K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D YIM_05485 manA1; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D YIM_43100 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YIM_05470 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YIM_42590 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D YIM_39605 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D YIM_31820 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D YIM_41175 fucA2; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D YIM_39845 fdh; D-threo-aldose 1-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D YIM_14695 Amidohydrolase K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120]
D YIM_39880 L-fuconate dehydratase K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D YIM_30445 Ureidoglycolate lyase K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]
D YIM_06185 xylA1; Xylose isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D YIM_18665 rhaB; Rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D YIM_14165 pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D YIM_05250 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D YIM_18605 pfkB2; 6-phosphofructokinase isozyme 2 K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D YIM_10420 pfkB1; 6-phosphofructokinase isozyme 2 K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D YIM_43915 gutB4; Sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D YIM_10440 gutB1; Sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D YIM_20035 gutB2; Sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D YIM_36355 xylA2; Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D YIM_21485 algD; GDP-mannose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D YIM_46760 fba2; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YIM_03085 fba1; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YIM_24180 fbaA; putative fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YIM_18035 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D YIM_32515 sacC; Levanase precursor K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D YIM_39020 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D YIM_41190 ywlF; Putative sugar phosphate isomerase YwlF K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D YIM_10435 fruB; Multiphosphoryl transfer protein K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D YIM_10425 mtlA1; PTS system mannitol-specific EIICBA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D YIM_33060 PTS system glucitol/sorbitol-specific transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D YIM_33055 srlE; Glucitol/sorbitol-specific phosphotransferase enzyme IIB component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D YIM_33050 srlA; Glucitol/sorbitol permease IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
C 00052 Galactose metabolism [PATH:amyy00052]
D YIM_03905 galM1; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D YIM_26525 galM2; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D YIM_13770 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D YIM_04360 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D YIM_45375 hypothetical protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YIM_44855 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YIM_13765 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YIM_01065 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YIM_04445 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YIM_14120 glkA2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D YIM_03080 glkA1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D YIM_36950 lacZ; Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D YIM_22660 bga; Beta-galactosidase precursor K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D YIM_20285 bgaB; Beta-galactosidase bgaB K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D YIM_01185 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D YIM_43295 agaA5; Alpha-galactosidase A precursor K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D YIM_14815 agaA1; Alpha-galactosidase A precursor K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D YIM_15990 agaA2; Alpha-galactosidase A precursor K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D YIM_26800 agaA3; Alpha-galactosidase A precursor K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D YIM_28715 agaA4; Alpha-galactosidase A precursor K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D YIM_14165 pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D YIM_37765 dgoD5; D-galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D YIM_29925 dgoD3; D-galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D YIM_32580 dgoD4; D-galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D YIM_26500 dgoD2; D-galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D YIM_37775 2-keto-3-deoxy-galactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D YIM_37770 dgoA; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
D YIM_39935 malL2; Oligo-1,6-glucosidase 1 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YIM_39075 malL1; Oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YIM_18660 Retaining alpha-galactosidase precursor K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YIM_43290 Retaining alpha-galactosidase precursor K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:amyy00053]
D YIM_00490 tuaD1; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YIM_33415 tuaD2; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YIM_32610 uidA4; Beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D YIM_09545 gnl1; Gluconolactonase precursor K01053 gnl; gluconolactonase [EC:3.1.1.17]
D YIM_39845 fdh; D-threo-aldose 1-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D YIM_43195 aldA4; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_06090 ald2; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21910 geoB1; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21995 geoB2; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_23080 puuC1; Aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_30345 geoB3; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_16550 gudD1; Glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D YIM_26240 gudD2; Glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D YIM_17550 araD; L-2-keto-3-deoxyarabonate dehydratase K13876 araD; 2-keto-3-deoxy-L-arabinonate dehydratase [EC:4.2.1.43]
D YIM_14775 putative 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41]
D YIM_26235 putative 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41]
D YIM_26245 mdlA2; Mandelate racemase K20023 talrD-galrD; L-talarate/galactarate dehydratase [EC:4.2.1.156 4.2.1.42]
D YIM_14765 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase K18981 udh; uronate dehydrogenase [EC:1.1.1.203]
C 00500 Starch and sucrose metabolism [PATH:amyy00500]
D YIM_39935 malL2; Oligo-1,6-glucosidase 1 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YIM_39075 malL1; Oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YIM_18660 Retaining alpha-galactosidase precursor K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YIM_43290 Retaining alpha-galactosidase precursor K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YIM_04445 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YIM_42920 bglX3; Periplasmic beta-glucosidase precursor K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YIM_05495 bglB1; Thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YIM_22095 bglB4; Thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YIM_36940 bglB5; Thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YIM_37180 bglB6; Thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YIM_41945 bglA8; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_00390 bglA1; Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_19805 bglB2; Beta-glucosidase B K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_19860 bglB3; Beta-glucosidase B K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_32605 bglA4; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_32815 bglA5; Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_26205 bglA2; Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_36960 bglA6; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_42500 celI; Endoglucanase 1 precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D YIM_41295 celA2; Endoglucanase 1 precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D YIM_27310 celE1; Endoglucanase E-5 precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D YIM_32705 celA1; Endoglucanase CelA precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D YIM_19780 celD; Endoglucanase E-4 precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D YIM_19795 cel1; Cellulase 1 precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D YIM_19830 celB; Endoglucanase E-2 precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D YIM_19870 Endoglucanase E1 precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D YIM_19835 cbhA; Exoglucanase A precursor K19668 CBH2; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.91]
D YIM_21270 licH1; putative 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YIM_28055 licH2; putative 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YIM_21585 rfbF; Glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D YIM_09435 Glycogen synthase K16150 K16150; glycogen synthase [EC:2.4.1.11]
D YIM_09475 1,4-alpha-glucan branching enzyme K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D YIM_09140 malP; Maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D YIM_37225 cga3; Glucoamylase precursor K01178 SGA1; glucoamylase [EC:3.2.1.3]
D YIM_03340 cga1; Glucoamylase precursor K01178 SGA1; glucoamylase [EC:3.2.1.3]
D YIM_17735 crr; Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YIM_02900 otsA; Trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D YIM_35610 treP; Alpha,alpha-trehalose phosphorylase K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64]
D YIM_14120 glkA2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D YIM_03080 glkA1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D YIM_18070 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D YIM_03925 kdgK1; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:amyy00520]
D YIM_14175 chtA; Chitinase 63 precursor K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D YIM_31045 chiC; Chitinase C precursor K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D YIM_04595 chiD1; Chitinase D precursor K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D YIM_30740 Glucan endo-1,3-beta-glucosidase precursor K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D YIM_41810 Exochitinase 1 precursor K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D YIM_02340 ybbD1; putative lipoprotein YbbD precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D YIM_27980 Beta-hexosaminidase A precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D YIM_25505 ybbD2; putative lipoprotein YbbD precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D YIM_38420 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D YIM_04580 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D YIM_31605 exo_I; Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D YIM_31765 csxA2; Exo-beta-D-glucosaminidase precursor K15855 csxA; exo-1,4-beta-D-glucosaminidase [EC:3.2.1.165]
D YIM_17735 crr; Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YIM_17720 ptsG; PTS system glucose-specific EIICBA component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D YIM_46790 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D YIM_03925 kdgK1; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D YIM_43940 glmS4; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D YIM_03225 glmS1; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D YIM_26110 glmS3; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D YIM_43990 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D YIM_04730 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D YIM_02320 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D YIM_11150 anmK; Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D YIM_06425 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D YIM_45480 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D YIM_44895 fdtC; dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose 3-N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D YIM_22655 afuB; Exo-alpha-(1->6)-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D YIM_20010 abfB2; Extracellular exo-alpha-L-arabinofuranosidase precursor K20844 abf1; non-reducing end alpha-L-arabinofuranosidase [EC:3.2.1.55]
D YIM_36920 xynB3; Beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D YIM_14120 glkA2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D YIM_03080 glkA1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D YIM_31245 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D YIM_04445 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YIM_00490 tuaD1; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YIM_33415 tuaD2; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YIM_13770 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D YIM_04360 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D YIM_45375 hypothetical protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YIM_44855 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YIM_13765 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YIM_01065 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YIM_01185 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D YIM_18070 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D YIM_09100 yvyI; Putative mannose-6-phosphate isomerase YvyI K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D YIM_05485 manA1; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D YIM_43100 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YIM_05470 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YIM_42590 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D YIM_39605 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D YIM_01105 arnB2; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D YIM_21480 arnB4; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D YIM_39545 epsN; Putative pyridoxal phosphate-dependent aminotransferase EpsN K13010 per; perosamine synthetase [EC:2.6.1.102]
D YIM_21485 algD; GDP-mannose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D YIM_21585 rfbF; Glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D YIM_36685 arnB5; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
C 00620 Pyruvate metabolism [PATH:amyy00620]
D YIM_02300 acsA2; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_22955 acsA4; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_27790 acsA5; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_32790 acsA6; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_44985 korA2; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D YIM_21750 korA1; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D YIM_44990 korB2; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D YIM_21745 korB1; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D YIM_16260 aceE2; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YIM_12030 aceE1; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YIM_33085 pdhC1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YIM_35285 acoC1; Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YIM_12215 dlaT; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YIM_10820 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_12220 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_27905 mhpF; Acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D YIM_29540 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D YIM_23800 adh1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D YIM_46020 adhA; putative formaldehyde dehydrogenase AdhA K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D YIM_14860 ackA1; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D YIM_22255 ackA2; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D YIM_14190 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YIM_26840 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D YIM_05635 Biotinylated protein TB7.3 K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D YIM_26835 accC1; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D YIM_42995 accC2; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D YIM_40295 accD4; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D YIM_18740 accD2; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D YIM_11110 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D YIM_43195 aldA4; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_06090 ald2; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21910 geoB1; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21995 geoB2; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_23080 puuC1; Aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_30345 geoB3; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_04560 thcA; EPTC-inducible aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D YIM_01380 succinyl-CoA synthetase subunit alpha K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D YIM_23465 hypothetical protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D YIM_33995 mdlB2; (S)-mandelate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D YIM_12025 mdlB1; (S)-mandelate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D YIM_19340 poxB; Pyruvate dehydrogenase [ubiquinone] K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D YIM_14850 ydaP1; Putative thiamine pyrophosphate-containing protein YdaP K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D YIM_10680 Lactate 2-monooxygenase K00467 E1.13.12.4; lactate 2-monooxygenase [EC:1.13.12.4]
D YIM_36890 Glyoxalase-like domain protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D YIM_09840 Glyoxalase-like domain protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D YIM_17475 putative metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D YIM_43470 gloB2; Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D YIM_05680 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D YIM_03530 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D YIM_39790 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D YIM_24290 mdh1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YIM_14595 fumA; Fumarate hydratase class I, aerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D YIM_05235 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D YIM_47400 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D YIM_09425 aceB1; Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D YIM_11170 aceB2; Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D YIM_47300 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_09040 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05010 fadA1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05915 fadA2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14515 fadA3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14530 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_21940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_20775 caiD2; Carnitinyl-CoA dehydratase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_33185 paaJ3; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_09705 leuA2; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D YIM_02030 leuA1; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:amyy00630]
D YIM_09420 icl; Isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D YIM_02300 acsA2; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_22955 acsA4; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_27790 acsA5; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_32790 acsA6; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_09425 aceB1; Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D YIM_11170 aceB2; Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D YIM_24290 mdh1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YIM_03835 citA; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D YIM_03930 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D YIM_23285 dmdA; 2,3-dimethylmalate dehydratase large subunit K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D YIM_27630 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D YIM_47300 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_09040 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05010 fadA1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05915 fadA2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14515 fadA3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14530 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_21940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_20775 caiD2; Carnitinyl-CoA dehydratase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_33185 paaJ3; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_09035 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D YIM_06440 scpA1; Methylmalonyl-CoA mutase K14447 ecm; ethylmalonyl-CoA mutase [EC:5.4.99.63]
D YIM_00345 mcl2; Malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D YIM_42695 accD6; putative propionyl-CoA carboxylase beta chain 5 K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D YIM_42995 accC2; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D YIM_42900 accD7; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D YIM_42905 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D YIM_40755 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D YIM_40295 accD4; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D YIM_18740 accD2; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D YIM_43075 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D YIM_43080 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D YIM_11505 mutE; Methylaspartate mutase E chain K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D YIM_11500 methylaspartate mutase subunit S K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D YIM_46805 putative FAD-linked oxidoreductase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D YIM_19205 putative FAD-linked oxidoreductase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D YIM_05955 putative FAD-linked oxidoreductase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D YIM_26130 putative FAD-linked oxidoreductase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D YIM_02085 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
D YIM_10360 Putative 2-hydroxyacid dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D YIM_03620 gph1; Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D YIM_45755 gph5; Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D YIM_11885 gph2; Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D YIM_16680 phnX; Phosphonoacetaldehyde hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D YIM_16350 Soluble hydrogenase 42 kDa subunit K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D YIM_26680 Soluble hydrogenase 42 kDa subunit K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D YIM_10570 glnA3; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_06610 glnA1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_06655 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_30760 puuA; Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_30935 glnA4; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_10605 glyA2; Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YIM_02555 glyA1; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YIM_25600 glyA4; Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YIM_20505 glyA3; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YIM_10590 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D YIM_10595 gcvT1; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D YIM_10820 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_12220 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_10600 gcvH1; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D YIM_27770 gcvH2; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D YIM_19240 gcl2; Glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D YIM_16375 gcl1; Glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D YIM_19250 hyi3; Hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D YIM_16315 hyi1; Hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D YIM_16365 hyi2; Hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D YIM_32630 glxR2; 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D YIM_19245 garR3; 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D YIM_19005 garR2; 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D YIM_16370 garR1; 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D YIM_19235 garK2; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YIM_10355 garK1; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YIM_16205 glxK1; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YIM_16380 glxK2; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YIM_30430 garK3; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YIM_40120 ttuC; putative tartrate dehydrogenase/decarboxylase TtuC K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D YIM_05980 dmlA; D-malate dehydrogenase [decarboxylating] K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D YIM_16200 Tartrate dehydrogenase/decarboxylase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D YIM_13105 eda; KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D YIM_05720 kgd; Multifunctional 2-oxoglutarate metabolism enzyme K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D YIM_19380 Formate dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9]
D YIM_19080 NADH-dependent formate dehydrogenase delta subunit FdsD K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D YIM_19085 Putative formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D YIM_19090 hndC; NADP-reducing hydrogenase subunit HndC K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D YIM_19095 hndA; NADP-reducing hydrogenase subunit HndA K00127 fdoI; formate dehydrogenase subunit gamma
D YIM_25120 nlhH6; Carboxylesterase NlhH K01432 AFMID; arylformamidase [EC:3.5.1.9]
D YIM_45500 purU2; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D YIM_25560 purU1; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:amyy00640]
D YIM_02300 acsA2; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_22955 acsA4; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_27790 acsA5; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_32790 acsA6; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_04585 acsA3; Acetyl-coenzyme A synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D YIM_01380 succinyl-CoA synthetase subunit alpha K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D YIM_23465 hypothetical protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D YIM_14860 ackA1; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D YIM_22255 ackA2; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D YIM_35415 bkdA1; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D YIM_47235 bkdA2; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D YIM_35410 bkdB1; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D YIM_47240 bkdB2; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D YIM_35405 bkdC; Dihydrolipoyllysine-residue acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D YIM_47245 pdhC3; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D YIM_10820 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_12220 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_05110 mmgC2; Acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D YIM_44980 putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_09170 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_05920 fadJ1; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YIM_26840 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D YIM_05635 Biotinylated protein TB7.3 K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D YIM_26835 accC1; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D YIM_42995 accC2; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D YIM_40295 accD4; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D YIM_18740 accD2; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D YIM_05970 davT1; 5-aminovalerate aminotransferase DavT K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YIM_38235 argD2; Acetylornithine aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YIM_41785 davT2; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D YIM_16720 gabT1; 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D YIM_42695 accD6; putative propionyl-CoA carboxylase beta chain 5 K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D YIM_42900 accD7; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D YIM_42905 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D YIM_40755 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D YIM_09035 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D YIM_43075 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D YIM_43080 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D YIM_43620 sucC2; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D YIM_18995 sucC1; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D YIM_43615 sucD2; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D YIM_19000 sucD1; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D YIM_38230 mmsA2; Methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D YIM_16870 mmsA1; Methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00650 Butanoate metabolism [PATH:amyy00650]
D YIM_47300 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_09040 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05010 fadA1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05915 fadA2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14515 fadA3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14530 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_21940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_20775 caiD2; Carnitinyl-CoA dehydratase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_33185 paaJ3; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_06505 fadB1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D YIM_03030 mmgB; putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D YIM_23565 paaH; 3-hydroxyadipyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D YIM_29300 fadB3; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D YIM_46355 fadB4; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D YIM_23455 fadB2; Fatty acid oxidation complex subunit alpha K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D YIM_05920 fadJ1; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YIM_44980 putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_09170 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_14480 echA3; putative enoyl-CoA hydratase echA8 K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_09020 ccr1; Crotonyl-CoA reductase K17829 ccrA; crotonyl-CoA reductase [EC:1.3.1.86]
D YIM_27905 mhpF; Acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D YIM_05875 phbC; Poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D YIM_10370 catI1; 3-oxoadipate CoA-transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D YIM_23575 catI2; 3-oxoadipate CoA-transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D YIM_10375 catJ1; 3-oxoadipate CoA-transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D YIM_23570 catJ2; 3-oxoadipate CoA-transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D YIM_40120 ttuC; putative tartrate dehydrogenase/decarboxylase TtuC K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D YIM_05980 dmlA; D-malate dehydrogenase [decarboxylating] K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D YIM_16200 Tartrate dehydrogenase/decarboxylase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D YIM_06000 maiA1; Maleate isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D YIM_29125 maiA2; Maleate isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D YIM_43320 sdhA2; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YIM_13125 sdhA1; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YIM_19355 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YIM_43325 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YIM_13130 frdB1; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YIM_19350 frdB2; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YIM_43310 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D YIM_19360 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D YIM_43315 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D YIM_20840 gadB; Glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D YIM_05970 davT1; 5-aminovalerate aminotransferase DavT K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YIM_38235 argD2; Acetylornithine aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YIM_41785 davT2; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D YIM_16720 gabT1; 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D YIM_14235 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YIM_05975 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YIM_21595 gabD4; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YIM_22015 gabD5; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YIM_44985 korA2; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D YIM_21750 korA1; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D YIM_44990 korB2; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D YIM_21745 korB1; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D YIM_21935 hypothetical protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D YIM_42825 yngG3; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D YIM_29905 yngG1; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D YIM_34835 yngG2; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D YIM_01495 acsA1; Acetyl-coenzyme A synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D YIM_11780 bdhA1; D-beta-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D YIM_22705 adc; Acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4]
D YIM_15210 adhT2; Alcohol dehydrogenase K18382 adh1; NAD+-dependent secondary alcohol dehydrogenase Adh1 [EC:1.1.1.-]
D YIM_45885 ydaP2; Putative thiamine pyrophosphate-containing protein YdaP K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_09645 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_19135 mdlC1; Benzoylformate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_05950 ilvX; Putative acetolactate synthase large subunit IlvX K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_06060 aruI2; putative 2-ketoarginine decarboxylase AruI K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_31110 ilvB2; Acetolactate synthase isozyme 1 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_22205 mdlC2; Benzoylformate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_23390 ilvG2; Acetolactate synthase isozyme 2 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_09650 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YIM_36870 yjmD; putative zinc-type alcohol dehydrogenase-like protein YjmD K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
D YIM_25290 budC2; Diacetyl reductase [(S)-acetoin forming] K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
D YIM_30660 gdhI1; Glucose 1-dehydrogenase 1 K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:amyy00660]
D YIM_45885 ydaP2; Putative thiamine pyrophosphate-containing protein YdaP K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_09645 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_19135 mdlC1; Benzoylformate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_05950 ilvX; Putative acetolactate synthase large subunit IlvX K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_06060 aruI2; putative 2-ketoarginine decarboxylase AruI K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_31110 ilvB2; Acetolactate synthase isozyme 1 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_22205 mdlC2; Benzoylformate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_23390 ilvG2; Acetolactate synthase isozyme 2 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_09650 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YIM_08245 frc2; Formyl-coenzyme A transferase K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22]
D YIM_43620 sucC2; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D YIM_18995 sucC1; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D YIM_43615 sucD2; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D YIM_19000 sucD1; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D YIM_11505 mutE; Methylaspartate mutase E chain K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D YIM_11500 methylaspartate mutase subunit S K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D YIM_00345 mcl2; Malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D YIM_21235 proA3; 4-hydroxy-4-methyl-2-oxoglutarate aldolase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D YIM_10150 leuC1; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D YIM_15765 leuC2; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D YIM_10155 leuD1; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D YIM_15760 leuD2; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D YIM_09700 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:amyy00562]
D YIM_17615 plcN; Non-hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D YIM_28450 plcB; Phospholipase C 2 precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D YIM_45150 impA2; Inositol-1-monophosphatase ImpA K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D YIM_08795 impA1; Inositol-1-monophosphatase ImpA K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D YIM_31240 suhB; Inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D YIM_44330 Myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D YIM_47850 ino1; Inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D YIM_12770 phy; 3-phytase precursor K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D YIM_10550 idhA2; Inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D YIM_09760 ligC1; 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D YIM_17520 iolG; Inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D YIM_10540 iolE1; Inosose dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D YIM_10505 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D YIM_10510 iolB; 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D YIM_10520 iolC; 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D YIM_38230 mmsA2; Methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D YIM_16870 mmsA1; Methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D YIM_18035 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:amyy00190]
D YIM_45125 ndhC; NAD(P)H-quinone oxidoreductase subunit 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D YIM_45120 nqo6; NADH-quinone oxidoreductase subunit 6 K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D YIM_45115 nuoC1; NADH-quinone oxidoreductase subunit C 1 K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D YIM_45110 nqo5; NADH-quinone oxidoreductase subunit 4 K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D YIM_45105 nuoE; NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D YIM_45100 nqo4; NADH-quinone oxidoreductase subunit 1 K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D YIM_45095 nqo3; NADH-quinone oxidoreductase subunit 3 K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D YIM_45090 nqo2; NADH-quinone oxidoreductase subunit 8 K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D YIM_45085 nqo1; NADH-quinone oxidoreductase subunit 9 K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D YIM_45080 NADH-quinone oxidoreductase subunit 10 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D YIM_45075 NADH-quinone oxidoreductase subunit 11 K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D YIM_45070 NADH-quinone oxidoreductase subunit 12 K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D YIM_45065 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D YIM_45060 nuoN; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D YIM_40465 NADH dehydrogenase-like protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D YIM_04910 NADH dehydrogenase-like protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D YIM_28360 yjlD2; NADH dehydrogenase-like protein YjlD K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D YIM_24640 yjlD1; NADH dehydrogenase-like protein YjlD K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D YIM_41975 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D YIM_43320 sdhA2; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YIM_13125 sdhA1; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YIM_19355 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YIM_43325 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YIM_13130 frdB1; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YIM_19350 frdB2; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YIM_43310 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D YIM_19360 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D YIM_43315 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D YIM_12355 aioB; Arsenite oxidase subunit AioB precursor K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D YIM_12360 qcrB; Menaquinol-cytochrome c reductase cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D YIM_12350 qcrC; Menaquinol-cytochrome c reductase cytochrome c subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D YIM_18085 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D YIM_12330 ctaF; Cytochrome c oxidase polypeptide 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D YIM_12345 ctaE; Cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D YIM_41750 ctaD2; Cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D YIM_14895 ctaD1; Cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D YIM_12325 ctaC; Cytochrome c oxidase subunit 2 precursor K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D YIM_18125 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D YIM_42465 cydA2; Cytochrome bd ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D YIM_00840 cydA1; Cytochrome bd ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D YIM_42470 cydB2; Cytochrome bd-I ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D YIM_00845 cydB1; Cytochrome bd-I ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D YIM_44335 yliI7; Soluble aldose sugar dehydrogenase YliI precursor K08738 CYC; cytochrome c
D YIM_10790 gdhB1; Quinoprotein glucose dehydrogenase B precursor K08738 CYC; cytochrome c
D YIM_23520 xlnA8; Endo-1,4-beta-xylanase A precursor K08738 CYC; cytochrome c
D YIM_06390 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D YIM_06400 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D YIM_06395 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D YIM_06385 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D YIM_06405 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D YIM_06370 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D YIM_06380 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D YIM_06375 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D YIM_37645 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D YIM_02580 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D YIM_10175 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms [PATH:amyy00710]
D YIM_18030 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D YIM_18025 gapA; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D YIM_46760 fba2; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YIM_03085 fba1; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YIM_24180 fbaA; putative fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YIM_05250 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D YIM_18080 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_12630 fas1; Ferredoxin fas2 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_12635 fas2; putative 33.6 kDa protein in fasciation locus precursor K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_20535 dxs1; 1-deoxy-D-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_20550 dxs2; 1-deoxy-D-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_20555 tktB1; Transketolase 2 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_30010 dxs3; 1-deoxy-D-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_30015 tktB2; Transketolase 2 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_39020 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D YIM_41190 ywlF; Putative sugar phosphate isomerase YwlF K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D YIM_18035 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D YIM_17920 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D YIM_18075 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D YIM_24290 mdh1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Carbon fixation pathways in prokaryotes [PATH:amyy00720]
D YIM_39790 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D YIM_24290 mdh1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YIM_14595 fumA; Fumarate hydratase class I, aerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D YIM_05235 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D YIM_43320 sdhA2; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YIM_13125 sdhA1; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YIM_19355 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YIM_43325 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YIM_13130 frdB1; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YIM_19350 frdB2; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YIM_43310 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D YIM_19360 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D YIM_43315 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D YIM_43615 sucD2; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D YIM_19000 sucD1; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D YIM_43620 sucC2; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D YIM_18995 sucC1; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D YIM_47300 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_09040 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05010 fadA1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05915 fadA2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14515 fadA3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14530 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_21940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_20775 caiD2; Carnitinyl-CoA dehydratase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_33185 paaJ3; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_44985 korA2; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D YIM_21750 korA1; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D YIM_44990 korB2; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D YIM_21745 korB1; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D YIM_43455 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D YIM_23285 dmdA; 2,3-dimethylmalate dehydratase large subunit K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D YIM_27630 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D YIM_26840 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D YIM_05635 Biotinylated protein TB7.3 K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D YIM_26835 accC1; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D YIM_00345 mcl2; Malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D YIM_09035 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D YIM_43075 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D YIM_43080 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D YIM_43520 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D YIM_13005 metF1; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D YIM_36160 metF2; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D YIM_14860 ackA1; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D YIM_22255 ackA2; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D YIM_02300 acsA2; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_22955 acsA4; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_27790 acsA5; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_32790 acsA6; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:amyy00680]
D YIM_19380 Formate dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9]
D YIM_19085 Putative formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D YIM_19090 hndC; NADP-reducing hydrogenase subunit HndC K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D YIM_19095 hndA; NADP-reducing hydrogenase subunit HndA K00127 fdoI; formate dehydrogenase subunit gamma
D YIM_19080 NADH-dependent formate dehydrogenase delta subunit FdsD K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D YIM_10605 glyA2; Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YIM_02555 glyA1; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YIM_25600 glyA4; Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YIM_20505 glyA3; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YIM_16350 Soluble hydrogenase 42 kDa subunit K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D YIM_26680 Soluble hydrogenase 42 kDa subunit K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D YIM_04820 eno1; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YIM_33545 eno2; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YIM_24290 mdh1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YIM_00345 mcl2; Malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D YIM_46760 fba2; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YIM_03085 fba1; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YIM_24180 fbaA; putative fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YIM_05250 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D YIM_14165 pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D YIM_19200 fgd7; F420-dependent glucose-6-phosphate dehydrogenase K00320 mer; 5,10-methylenetetrahydromethanopterin reductase [EC:1.5.98.2]
D YIM_15240 methylenetetrahydromethanopterin reductase K00320 mer; 5,10-methylenetetrahydromethanopterin reductase [EC:1.5.98.2]
D YIM_38415 methylenetetrahydromethanopterin reductase K00320 mer; 5,10-methylenetetrahydromethanopterin reductase [EC:1.5.98.2]
D YIM_14860 ackA1; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D YIM_22255 ackA2; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D YIM_02300 acsA2; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_22955 acsA4; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_27790 acsA5; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_32790 acsA6; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_45450 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YIM_31770 pspA2; Phosphoserine phosphatase 1 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YIM_09690 serA1; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YIM_41185 yoaD; Putative 2-hydroxyacid dehydrogenase YoaD K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YIM_03790 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D YIM_41745 serB1; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D YIM_39025 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
D YIM_43415 mqnE; Aminodeoxyfutalosine synthase K11779 fbiC; FO synthase [EC:2.5.1.147 4.3.1.32]
D YIM_10180 cofC2; 2-phospho-L-lactate guanylyltransferase K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105]
D YIM_42555 cofD; 2-phospho-L-lactate transferase K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28]
D YIM_42560 fbiB2; Coenzyme F420:L-glutamate ligase K24998 fbiB; dehydro coenzyme F420 reductase / coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:1.3.8.17 6.3.2.31 6.3.2.34]
C 00910 Nitrogen metabolism [PATH:amyy00910]
D YIM_42170 narK2; Nitrate/nitrite transporter NarK K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D YIM_22315 narK1; putative nitrate/nitrite transporter NarK2 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D YIM_22320 narG; Nitrate reductase alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D YIM_22325 narY; Respiratory nitrate reductase 2 beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D YIM_22335 narX3; Nitrate reductase-like protein NarX K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D YIM_42180 nasC2; Assimilatory nitrate reductase catalytic subunit K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D YIM_42175 nasD2; Nitrite reductase [NAD(P)H] K00360 nasB; assimilatory nitrate reductase electron transfer subunit [EC:1.7.99.-]
D YIM_42165 nasD1; Nitrite reductase [NAD(P)H] K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D YIM_42160 nirD; Nitrite reductase (NADH) small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D YIM_38405 Nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D YIM_14225 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D YIM_39105 gdh; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D YIM_27670 gdhA; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D YIM_10570 glnA3; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_06610 glnA1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_06655 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_30760 puuA; Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_30935 glnA4; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_40160 gltB3; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D YIM_12895 gltB1; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D YIM_40165 gltB4; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D YIM_12900 gltB2; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D YIM_37855 cynT2; Carbonic anhydrase 1 K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D YIM_12450 cynT1; Carbonic anhydrase 1 K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D YIM_25000 mtcA2; Carbonic anhydrase 2 K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D YIM_39280 cah1; Carbonic anhydrase precursor K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:amyy00920]
D YIM_03580 tauD1; Alpha-ketoglutarate-dependent taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D YIM_08475 ssuA1; Putative aliphatic sulfonates-binding protein precursor K15553 ssuA; sulfonate transport system substrate-binding protein
D YIM_12315 NMT1/THI5 like protein K15553 ssuA; sulfonate transport system substrate-binding protein
D YIM_08485 ssuC1; Putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein
D YIM_12310 ssuC3; Putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein
D YIM_08480 ssuB1; Aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D YIM_12305 tauB; Taurine import ATP-binding protein TauB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D YIM_08470 ssuD1; Alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D YIM_02100 azo1; FMN-dependent NADPH-azoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D YIM_27105 ssuE1; FMN reductase (NADPH) K00299 ssuE; FMN reductase [EC:1.5.1.38]
D YIM_37535 ssuE2; FMN reductase (NADPH) K00299 ssuE; FMN reductase [EC:1.5.1.38]
D YIM_40615 cysNC3; Bifunctional enzyme CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D YIM_29515 cysNC1; Bifunctional enzyme CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D YIM_38355 cysNC2; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D YIM_40610 cysD4; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YIM_38350 cysD3; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YIM_29510 cysD1; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YIM_36860 cysD2; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YIM_36855 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D YIM_35975 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D YIM_38345 cysH; Phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D YIM_38340 sir; Sulfite reductase [ferredoxin] K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D YIM_23790 DoxX K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D YIM_46290 Putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D YIM_13780 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D YIM_41075 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D YIM_40905 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YIM_45195 sbnA6; putative siderophore biosynthesis protein SbnA K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YIM_12855 cysM1; Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YIM_05820 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D YIM_05040 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D YIM_00260 metC; Cystathionine beta-lyase MetC K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D YIM_27095 ssuD4; Alkanesulfonate monooxygenase K17228 sfnG; dimethylsulfone monooxygenase [EC:1.14.14.35]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:amyy00061]
D YIM_26840 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D YIM_05635 Biotinylated protein TB7.3 K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D YIM_26835 accC1; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D YIM_42995 accC2; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D YIM_40295 accD4; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D YIM_18740 accD2; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D YIM_43965 Phosphopantetheine attachment site K02078 acpP; acyl carrier protein
D YIM_32330 Phosphopantetheine attachment site K02078 acpP; acyl carrier protein
D YIM_11975 acpM1; Meromycolate extension acyl carrier protein K02078 acpP; acyl carrier protein
D YIM_25705 acpP2; Acyl carrier protein K02078 acpP; acyl carrier protein
D YIM_26830 acpM2; Meromycolate extension acyl carrier protein K02078 acpP; acyl carrier protein
D YIM_26890 acpP3; Acyl carrier protein K02078 acpP; acyl carrier protein
D YIM_31970 acyl carrier protein K02078 acpP; acyl carrier protein
D YIM_11985 fabD2; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YIM_40420 fabH3; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D YIM_01425 fabH1; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D YIM_11970 kasA; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_25680 fabF1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_25685 fabF2; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_25700 fabF4; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_26850 fabF5; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_26860 fabF6; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_26865 fabF7; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_26875 fabF8; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_26880 fabF9; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_26885 fabF10; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_39345 ppsA5; Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_46100 fabG40; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_47295 fabG42; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_01125 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_18490 novJ1; Short-chain reductase protein NovJ K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_17230 fabG10; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_21810 fabG15; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_23145 tsaC2; 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_24145 fabG17; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_25690 fabG19; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_26815 fabG21; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_19560 fabG13; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_33180 fabG30; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_48000 fabG43; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_48085 bdcA4; Cyclic-di-GMP-binding biofilm dispersal mediator protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_30605 fabG29; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_34675 fabG31; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_38765 ycdF2; Glucose 1-dehydrogenase 2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_43800 bdcA3; Cyclic-di-GMP-binding biofilm dispersal mediator protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_21250 xecD1; 2-(R)-hydroxypropyl-CoM dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_26905 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YIM_26820 fabZ1; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YIM_26825 fabZ2; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YIM_26900 fabZ3; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YIM_34860 Nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D YIM_26855 fabL; Enoyl-[acyl-carrier-protein] reductase [NADPH] FabL K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D YIM_12685 desA2; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D YIM_45350 Long-chain-fatty-acid--CoA ligase FadD13 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_42735 lcfB10; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_14090 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_14545 Long-chain-fatty-acid--CoA ligase FadD13 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_27425 lcfB6; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_20780 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_21895 lcfB4; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:amyy00071]
D YIM_47300 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_09040 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05010 fadA1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05915 fadA2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14515 fadA3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14530 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_21940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_20775 caiD2; Carnitinyl-CoA dehydratase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_33185 paaJ3; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_10125 pcaF; Beta-ketoadipyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YIM_31060 paaJ2; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YIM_05920 fadJ1; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YIM_44980 putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_09170 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_23455 fadB2; Fatty acid oxidation complex subunit alpha K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D YIM_05110 mmgC2; Acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D YIM_40110 acdA13; Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_42740 Acyl-CoA dehydrogenase, short-chain specific K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_01375 acdA1; Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_05900 acrC1; Acryloyl-CoA reductase (NADH) K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_18355 mmgC10; Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_18475 bbsG2; (R)-benzylsuccinyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_29530 bbsG4; (R)-benzylsuccinyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_29575 bbsG5; (R)-benzylsuccinyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_21855 bbsG3; (R)-benzylsuccinyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_36820 acrC4; Acryloyl-CoA reductase (NADH) K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_04045 acdA2; Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_14250 mmgC6; Acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D YIM_16710 mmgC9; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D YIM_12710 mmgC5; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D YIM_22715 mmgC13; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D YIM_45350 Long-chain-fatty-acid--CoA ligase FadD13 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_42735 lcfB10; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_14090 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_14545 Long-chain-fatty-acid--CoA ligase FadD13 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_27425 lcfB6; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_20780 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_21895 lcfB4; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_22020 thcD3; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D YIM_36765 thcD6; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D YIM_10650 thcD1; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D YIM_25620 bedA; Benzene 1,2-dioxygenase system ferredoxin--NAD(+) reductase subunit K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D YIM_29540 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D YIM_23800 adh1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D YIM_43195 aldA4; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_06090 ald2; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21910 geoB1; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21995 geoB2; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_23080 puuC1; Aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_30345 geoB3; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:amyy00121]
D YIM_15175 hdhA2; 7-alpha-hydroxysteroid dehydrogenase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
D YIM_33605 baiB2; Bile acid-coenzyme A ligase K15868 baiB; bile acid-coenzyme A ligase [EC:6.2.1.7]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:amyy00561]
D YIM_19235 garK2; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YIM_10355 garK1; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YIM_16205 glxK1; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YIM_16380 glxK2; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YIM_30430 garK3; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YIM_43195 aldA4; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_06090 ald2; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21910 geoB1; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21995 geoB2; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_23080 puuC1; Aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_30345 geoB3; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_46020 adhA; putative formaldehyde dehydrogenase AdhA K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D YIM_06485 dhaK1; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D YIM_06490 dhaL; PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D YIM_06495 dhaM; PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D YIM_43035 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D YIM_31410 yutF; putative hydrolase YutF K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D YIM_46210 plsC7; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D YIM_14145 plsC4; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D YIM_31305 plsC5; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D YIM_27225 dagK2; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D YIM_05585 tgs1; putative diacylglycerol O-acyltransferase tgs3 K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D YIM_06050 tgs2; putative diacylglycerol O-acyltransferase tgs2 K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D YIM_12930 tgs3; putative diacylglycerol O-acyltransferase tgs1 K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D YIM_35445 Putative diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D YIM_32785 fbpA1; Diacylglycerol acyltransferase/mycolyltransferase Ag85A precursor K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122]
D YIM_26405 fbpB1; Diacylglycerol acyltransferase/mycolyltransferase Ag85B precursor K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122]
D YIM_27435 estA; Lipase EstA precursor K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D YIM_01070 pimA1; GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D YIM_43295 agaA5; Alpha-galactosidase A precursor K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D YIM_14815 agaA1; Alpha-galactosidase A precursor K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D YIM_15990 agaA2; Alpha-galactosidase A precursor K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D YIM_26800 agaA3; Alpha-galactosidase A precursor K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D YIM_28715 agaA4; Alpha-galactosidase A precursor K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:amyy00564]
D YIM_10190 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D YIM_43025 glpD2; Aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D YIM_03960 glpD1; Aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D YIM_46210 plsC7; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D YIM_14145 plsC4; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D YIM_31305 plsC5; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D YIM_27225 dagK2; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D YIM_17615 plcN; Non-hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D YIM_28450 plcB; Phospholipase C 2 precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D YIM_47310 glpQ3; putative glycerophosphoryl diester phosphodiesterase 1 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D YIM_46710 glpQ2; Glycerophosphoryl diester phosphodiesterase precursor K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D YIM_24965 glpQ1; putative glycerophosphoryl diester phosphodiesterase 1 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D YIM_29220 ugpQ; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D YIM_28285 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D YIM_11425 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D YIM_03370 CDP-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D YIM_03375 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D YIM_35760 pgsA3; Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2 K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D YIM_27775 pgsA2; Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2 K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D YIM_15140 prenyltransferase K17105 E2.5.1.42; geranylgeranylglycerol-phosphate geranylgeranyltransferase [EC:2.5.1.42]
C 00565 Ether lipid metabolism [PATH:amyy00565]
D YIM_03970 putative FAD-linked oxidoreductase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
D YIM_17615 plcN; Non-hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D YIM_28450 plcB; Phospholipase C 2 precursor K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:amyy00600]
D YIM_27880 Neutral ceramidase precursor K12349 ASAH2; neutral ceramidase [EC:3.5.1.23]
D YIM_27870 gadA; Glutamate decarboxylase alpha K01634 SGPL1; sphinganine-1-phosphate aldolase [EC:4.1.2.27]
D YIM_36950 lacZ; Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D YIM_40265 nedA3; Sialidase precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D YIM_15935 nedA1; Sialidase precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D YIM_20280 nedA2; Sialidase precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D YIM_43295 agaA5; Alpha-galactosidase A precursor K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D YIM_14815 agaA1; Alpha-galactosidase A precursor K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D YIM_15990 agaA2; Alpha-galactosidase A precursor K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D YIM_26800 agaA3; Alpha-galactosidase A precursor K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D YIM_28715 agaA4; Alpha-galactosidase A precursor K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D YIM_38420 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D YIM_04580 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D YIM_31605 exo_I; Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
D YIM_30355 fabG28; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00084 CBR3; carbonyl reductase 3 [EC:1.1.1.184]
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:amyy00592]
D YIM_05110 mmgC2; Acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D YIM_10125 pcaF; Beta-ketoadipyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YIM_31060 paaJ2; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:amyy01040]
D YIM_04745 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D YIM_18120 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D YIM_15220 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D YIM_07945 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D YIM_12685 desA2; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D YIM_11915 desA1; Stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D YIM_21085 desA3; Stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D YIM_21090 Stearoyl-CoA 9-desaturase electron transfer partner K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase
D YIM_11920 Stearoyl-CoA 9-desaturase electron transfer partner K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase
D YIM_05110 mmgC2; Acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D YIM_16280 GDSL-like Lipase/Acylhydrolase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D YIM_36330 GDSL-like Lipase/Acylhydrolase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D YIM_14195 tesB1; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D YIM_23460 tesB2; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:amyy00230]
D YIM_32125 nudF4; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D YIM_04725 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D YIM_46440 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D YIM_46695 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D YIM_43600 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D YIM_46505 purL; Phosphoribosylformylglycinamidine synthase 2 K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D YIM_46525 phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D YIM_46520 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D YIM_46435 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D YIM_42750 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D YIM_42745 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D YIM_17620 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D YIM_46595 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D YIM_43595 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D YIM_17455 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D YIM_47120 yhcR; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D YIM_18600 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D YIM_03570 nagD; Ribonucleotide monophosphatase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D YIM_43090 punA; Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D YIM_13960 yfiH; Laccase domain protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D YIM_02600 hpt; Hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D YIM_43740 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D YIM_43755 guaB2; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D YIM_38650 ndkA; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D YIM_41600 Non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D YIM_15670 xdhA1; Xanthine dehydrogenase molybdenum-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D YIM_16685 xdhA2; Xanthine dehydrogenase molybdenum-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D YIM_22630 xdhA4; Xanthine dehydrogenase molybdenum-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D YIM_19595 xdhA3; Xanthine dehydrogenase molybdenum-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D YIM_30130 xdhA5; Xanthine dehydrogenase molybdenum-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D YIM_33130 xdhA6; Xanthine dehydrogenase molybdenum-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D YIM_35205 xdhA7; Xanthine dehydrogenase molybdenum-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D YIM_15665 hcrB1; 4-hydroxybenzoyl-CoA reductase subunit beta K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D YIM_16690 hcrB2; 4-hydroxybenzoyl-CoA reductase subunit beta K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D YIM_22625 hcrB4; 4-hydroxybenzoyl-CoA reductase subunit beta K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D YIM_19600 hcrB3; 4-hydroxybenzoyl-CoA reductase subunit beta K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D YIM_30135 hcrB5; 4-hydroxybenzoyl-CoA reductase subunit beta K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D YIM_33135 hcrB6; 4-hydroxybenzoyl-CoA reductase subunit beta K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D YIM_35195 hcrB7; 4-hydroxybenzoyl-CoA reductase subunit beta K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D YIM_15660 cdhC1; Caffeine dehydrogenase subunit gamma K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D YIM_22620 cutS4; Carbon monoxide dehydrogenase small chain K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D YIM_19605 cutS3; Carbon monoxide dehydrogenase small chain K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D YIM_30140 cutS5; Carbon monoxide dehydrogenase small chain K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D YIM_33140 cutS6; Carbon monoxide dehydrogenase small chain K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D YIM_35190 cutS7; Carbon monoxide dehydrogenase small chain K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D YIM_43710 guaA2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D YIM_05150 guaB1; Inosine-5'-monophosphate dehydrogenase K26110 guaB1; GMP reductase [EC:1.7.1.7]
D YIM_19265 guaD1; Guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D YIM_17860 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D YIM_13630 nrdJ; Vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YIM_18325 nrdA; Ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YIM_42715 nrdB3; R2-like ligand binding oxidase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YIM_18320 nrdB2; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YIM_03610 nrdB1; R2-like ligand binding oxidase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YIM_38050 dgt3; Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D YIM_04955 dgt1; Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D YIM_18250 dgt2; Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D YIM_46765 relA2; Bifunctional (p)ppGpp synthase/hydrolase relA K21138 HDDC3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2]
D YIM_17460 relA1; Bifunctional (p)ppGpp synthase/hydrolase relA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D YIM_45415 ppx; Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D YIM_04845 gppA1; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D YIM_19575 gppA2; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D YIM_35625 gppA3; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D YIM_09005 pH-sensitive adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D YIM_01430 cyaB1; Adenylate cyclase 2 K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D YIM_07350 CYTH domain protein K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D YIM_46725 purA2; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D YIM_08170 purA1; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D YIM_12290 adoK1; Adenosine kinase K00856 ADK; adenosine kinase [EC:2.7.1.20]
D YIM_36150 adoK2; Adenosine kinase K00856 ADK; adenosine kinase [EC:2.7.1.20]
D YIM_43250 Aminodeoxyfutalosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D YIM_44145 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D YIM_27510 cpdA; 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D YIM_17320 AP-4-A phosphorylase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D YIM_40615 cysNC3; Bifunctional enzyme CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D YIM_29515 cysNC1; Bifunctional enzyme CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D YIM_38355 cysNC2; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D YIM_40610 cysD4; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YIM_38350 cysD3; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YIM_29510 cysD1; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YIM_36860 cysD2; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YIM_19285 uox2; Uricase K00365 uaZ; urate oxidase [EC:1.7.3.3]
D YIM_11225 uox1; Uricase K00365 uaZ; urate oxidase [EC:1.7.3.3]
D YIM_11230 hiuH; 5-hydroxyisourate hydrolase precursor K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D YIM_11235 uao; Uric acid degradation bifunctional protein K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D YIM_04960 hypothetical protein K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D YIM_11250 allB1; Allantoinase K01466 allB; allantoinase [EC:3.5.2.5]
D YIM_34880 allB2; Allantoinase K01466 allB; allantoinase [EC:3.5.2.5]
D YIM_33595 hypothetical protein K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D YIM_03850 ureC; Urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D YIM_03845 ureB1; Urease subunit beta 1 K01429 ureB; urease subunit beta [EC:3.5.1.5]
D YIM_03840 ureA; Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:amyy00240]
D YIM_17845 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D YIM_17840 carA2; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D YIM_17825 pyrB1; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D YIM_29435 pyrB2; Aspartate carbamoyltransferase catalytic chain K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D YIM_40935 allB3; Allantoinase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D YIM_17830 pyrC2; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D YIM_35730 pyrD; Dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D YIM_46930 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D YIM_17850 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D YIM_11415 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D YIM_38650 ndkA; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D YIM_42925 maf; Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D YIM_31370 pyrG2; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D YIM_03275 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D YIM_47120 yhcR; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D YIM_18600 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D YIM_03570 nagD; Ribonucleotide monophosphatase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D YIM_42965 udp; Uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D YIM_43180 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D YIM_17820 pyrR; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D YIM_14635 psuG; Pseudouridine-5'-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D YIM_43265 cdd; Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D YIM_18400 tadA2; tRNA-specific adenosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D YIM_47080 dcd; Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D YIM_13630 nrdJ; Vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YIM_18325 nrdA; Ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YIM_42715 nrdB3; R2-like ligand binding oxidase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YIM_18320 nrdB2; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YIM_03610 nrdB1; R2-like ligand binding oxidase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YIM_47780 tmk3; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D YIM_05525 tmk2; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D YIM_02435 tmk1; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D YIM_31220 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D YIM_43260 pdp; Pyrimidine-nucleoside phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D YIM_24990 tdk; Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D YIM_33865 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D YIM_35845 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D YIM_38260 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D YIM_38255 N-carbamoyl-D-amino acid hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D YIM_06895 amaB; N-carbamoyl-L-amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D YIM_23385 Putative hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D YIM_43870 aam4; Acylamidase K19795 E3.5.1.95; ureidomalonase [EC:3.5.1.95]
D YIM_04140 ydfG; NADP-dependent 3-hydroxy acid dehydrogenase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D YIM_17310 rutE1; putative malonic semialdehyde reductase RutE K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
D YIM_23015 rutE2; putative malonic semialdehyde reductase RutE K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:amyy00250]
D YIM_25250 aspC1; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D YIM_44565 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D YIM_12490 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D YIM_40855 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D YIM_25325 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D YIM_40840 asnB5; Asparagine synthetase [glutamine-hydrolyzing] 1 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YIM_41080 asnB6; Asparagine synthetase [glutamine-hydrolyzing] 1 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YIM_11065 asnO1; Asparagine synthetase [glutamine-hydrolyzing] 3 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YIM_12320 asnB1; Putative asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YIM_21505 asnB2; Asparagine synthetase [glutamine-hydrolyzing] 1 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YIM_25090 asnO2; Asparagine synthetase [glutamine-hydrolyzing] 3 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YIM_29260 asnB3; Putative asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YIM_36385 asnB4; Asparagine synthetase B [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YIM_16350 Soluble hydrogenase 42 kDa subunit K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D YIM_26680 Soluble hydrogenase 42 kDa subunit K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D YIM_05785 ald1; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D YIM_45700 aspA; Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D YIM_37585 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D YIM_31465 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D YIM_46725 purA2; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D YIM_08170 purA1; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D YIM_46595 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D YIM_17825 pyrB1; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D YIM_29435 pyrB2; Aspartate carbamoyltransferase catalytic chain K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D YIM_20840 gadB; Glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D YIM_05970 davT1; 5-aminovalerate aminotransferase DavT K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YIM_38235 argD2; Acetylornithine aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YIM_41785 davT2; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D YIM_16720 gabT1; 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D YIM_14235 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YIM_05975 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YIM_21595 gabD4; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YIM_22015 gabD5; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YIM_40160 gltB3; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D YIM_12895 gltB1; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D YIM_40165 gltB4; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D YIM_12900 gltB2; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D YIM_39105 gdh; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D YIM_27670 gdhA; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D YIM_05595 rocA1; 1-pyrroline-5-carboxylate dehydrogenase 1 K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D YIM_24235 rocA2; 1-pyrroline-5-carboxylate dehydrogenase 1 K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D YIM_10570 glnA3; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_06610 glnA1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_06655 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_30760 puuA; Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_30935 glnA4; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_17845 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D YIM_17840 carA2; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D YIM_46520 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D YIM_43940 glmS4; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D YIM_03225 glmS1; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D YIM_26110 glmS3; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D YIM_46440 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:amyy00260]
D YIM_02055 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D YIM_02060 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D YIM_06280 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D YIM_06290 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D YIM_06285 thrC1; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D YIM_32360 thrC2; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D YIM_38485 thrC3; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D YIM_46615 ltaA2; L-allo-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D YIM_10605 glyA2; Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YIM_02555 glyA1; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YIM_25600 glyA4; Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YIM_20505 glyA3; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YIM_16350 Soluble hydrogenase 42 kDa subunit K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D YIM_26680 Soluble hydrogenase 42 kDa subunit K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D YIM_19235 garK2; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YIM_10355 garK1; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YIM_16205 glxK1; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YIM_16380 glxK2; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YIM_30430 garK3; Glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YIM_45450 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YIM_31770 pspA2; Phosphoserine phosphatase 1 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YIM_09690 serA1; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YIM_41185 yoaD; Putative 2-hydroxyacid dehydrogenase YoaD K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YIM_03790 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D YIM_41745 serB1; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D YIM_04140 ydfG; NADP-dependent 3-hydroxy acid dehydrogenase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D YIM_25095 rebO; Flavin-dependent L-tryptophan oxidase RebO precursor K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D YIM_14950 Histamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D YIM_16730 Histamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D YIM_10590 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D YIM_10595 gcvT1; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D YIM_10820 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_12220 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_10600 gcvH1; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D YIM_27770 gcvH2; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D YIM_03370 CDP-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D YIM_20540 gbsB1; Alcohol dehydrogenase K11440 gbsB; choline dehydrogenase [EC:1.1.1.1]
D YIM_31165 codA; Choline oxidase K17755 codA; choline oxidase [EC:1.1.3.17]
D YIM_31115 prr; Gamma-aminobutyraldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D YIM_20570 aldA2; Lactaldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D YIM_31155 gbsA; Betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D YIM_15570 gabD3; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D YIM_33410 aldA3; Lactaldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D YIM_25575 mlr4; 4-methylaminobutanoate oxidase (formaldehyde-forming) K00309 dmg; dimethylglycine oxidase [EC:1.5.3.10]
D YIM_25585 gcvT2; Aminomethyltransferase K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D YIM_25595 soxB; Sarcosine oxidase subunit beta K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D YIM_25580 Sarcosine oxidase, gamma subunit family K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D YIM_25590 Sarcosine oxidase, delta subunit family K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D YIM_05015 cbs; Putative cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D YIM_10615 sdaB; L-serine dehydratase 2 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D YIM_25565 sdaA; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D YIM_17890 psdht1; Phenylserine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YIM_05050 tdcB3; L-threonine dehydratase catabolic TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YIM_09410 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YIM_13020 tdcB5; L-threonine dehydratase catabolic TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YIM_08760 tdcB4; L-threonine dehydratase catabolic TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YIM_23940 tdcB6; L-threonine dehydratase catabolic TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YIM_12825 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D YIM_12820 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D YIM_03155 ectB; Diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D YIM_03150 ectA; L-2,4-diaminobutyric acid acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D YIM_03160 ectC; L-ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
D YIM_03165 Phytanoyl-CoA dioxygenase (PhyH) K10674 ectD; ectoine hydroxylase [EC:1.14.11.55]
D YIM_30775 ddc4; L-2,4-diaminobutyrate decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:amyy00270]
D YIM_41075 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D YIM_40905 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YIM_45195 sbnA6; putative siderophore biosynthesis protein SbnA K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YIM_12855 cysM1; Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YIM_05015 cbs; Putative cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D YIM_19375 mmuM; Homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D YIM_27390 metH1; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D YIM_36155 metH2; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D YIM_18315 metE1; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D YIM_17875 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D YIM_14300 speH; S-adenosylmethionine decarboxylase proenzyme precursor K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D YIM_14295 speE1; Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D YIM_31005 speE2; Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D YIM_13960 yfiH; Laccase domain protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D YIM_47490 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D YIM_40135 mtnA1; Methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D YIM_42975 mtnA2; Methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D YIM_42985 mtnB; Methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D YIM_42980 mtnC; Enolase-phosphatase E1 K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D YIM_42990 mtnD; Acireductone dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D YIM_36200 mccB; Cystathionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D YIM_44775 ydiP2; putative BsuMI modification methylase subunit YdiP K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YIM_01545 aplIM1; Modification methylase AplI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YIM_07770 ydiP1; putative BsuMI modification methylase subunit YdiP K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YIM_21710 aplIM2; Modification methylase AplI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YIM_41090 ahcY2; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D YIM_05520 ahcY1; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D YIM_28185 dcyD1; D-cysteine desulfhydrase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D YIM_31550 acdS; 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D YIM_02055 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D YIM_02060 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D YIM_06280 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D YIM_05820 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D YIM_05040 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D YIM_00260 metC; Cystathionine beta-lyase MetC K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D YIM_05815 mdeA1; Methionine gamma-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D YIM_11260 mdeA2; Methionine gamma-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D YIM_12255 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YIM_27660 gshA; Glutamate--cysteine ligase GshA K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D YIM_25250 aspC1; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D YIM_44565 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D YIM_46290 Putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D YIM_13780 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D YIM_45655 dcyD2; D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D YIM_24290 mdh1; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YIM_10615 sdaB; L-serine dehydratase 2 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D YIM_25565 sdaA; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D YIM_09690 serA1; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YIM_41185 yoaD; Putative 2-hydroxyacid dehydrogenase YoaD K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YIM_03790 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D YIM_22540 sbnA1; putative siderophore biosynthesis protein SbnA K22847 cysK2; S-sulfo-L-cysteine synthase (3-phospho-L-serine-dependent) [EC:2.8.5.1]
D YIM_35370 sbnA5; putative siderophore biosynthesis protein SbnA K22847 cysK2; S-sulfo-L-cysteine synthase (3-phospho-L-serine-dependent) [EC:2.8.5.1]
C 00280 Valine, leucine and isoleucine degradation [PATH:amyy00280]
D YIM_12255 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YIM_40015 vdh2; Valine dehydrogenase K00271 vdh; valine dehydrogenase (NAD+) [EC:1.4.1.23]
D YIM_40475 pdh; Phenylalanine dehydrogenase K00271 vdh; valine dehydrogenase (NAD+) [EC:1.4.1.23]
D YIM_35415 bkdA1; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D YIM_47235 bkdA2; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D YIM_35410 bkdB1; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D YIM_47240 bkdB2; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D YIM_35405 bkdC; Dihydrolipoyllysine-residue acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D YIM_47245 pdhC3; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D YIM_10820 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_12220 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_40110 acdA13; Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_42740 Acyl-CoA dehydrogenase, short-chain specific K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_01375 acdA1; Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_05900 acrC1; Acryloyl-CoA reductase (NADH) K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_18355 mmgC10; Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_18475 bbsG2; (R)-benzylsuccinyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_29530 bbsG4; (R)-benzylsuccinyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_29575 bbsG5; (R)-benzylsuccinyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_21855 bbsG3; (R)-benzylsuccinyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_36820 acrC4; Acryloyl-CoA reductase (NADH) K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_04045 acdA2; Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D YIM_05860 mmgC3; Acyl-CoA dehydrogenase K11410 acdH; short-chain 2-methylacyl-CoA dehydrogenase [EC:1.3.8.5]
D YIM_44980 putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_09170 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_05920 fadJ1; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YIM_10125 pcaF; Beta-ketoadipyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YIM_31060 paaJ2; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YIM_42695 accD6; putative propionyl-CoA carboxylase beta chain 5 K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D YIM_42995 accC2; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D YIM_42900 accD7; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D YIM_42905 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D YIM_40755 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D YIM_40295 accD4; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D YIM_18740 accD2; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D YIM_09035 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D YIM_43075 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D YIM_43080 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D YIM_30580 glxR1; 2-hydroxy-3-oxopropionate reductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D YIM_38230 mmsA2; Methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D YIM_16870 mmsA1; Methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D YIM_43195 aldA4; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_06090 ald2; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21910 geoB1; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21995 geoB2; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_23080 puuC1; Aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_30345 geoB3; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_43860 lcfB12; Long-chain-fatty-acid--CoA ligase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D YIM_41785 davT2; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D YIM_16720 gabT1; 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D YIM_05855 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D YIM_05850 Methylmalonyl-CoA carboxyltransferase 12S subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D YIM_38370 menB2; 1,4-Dihydroxy-2-naphthoyl-CoA synthase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D YIM_42825 yngG3; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D YIM_29905 yngG1; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D YIM_34835 yngG2; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D YIM_01495 acsA1; Acetyl-coenzyme A synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D YIM_47300 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_09040 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05010 fadA1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05915 fadA2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14515 fadA3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14530 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_21940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_20775 caiD2; Carnitinyl-CoA dehydratase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_33185 paaJ3; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_21935 hypothetical protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:amyy00290]
D YIM_17890 psdht1; Phenylserine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YIM_05050 tdcB3; L-threonine dehydratase catabolic TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YIM_09410 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YIM_13020 tdcB5; L-threonine dehydratase catabolic TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YIM_08760 tdcB4; L-threonine dehydratase catabolic TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YIM_23940 tdcB6; L-threonine dehydratase catabolic TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YIM_10150 leuC1; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D YIM_15765 leuC2; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D YIM_10155 leuD1; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D YIM_15760 leuD2; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D YIM_09700 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D YIM_45885 ydaP2; Putative thiamine pyrophosphate-containing protein YdaP K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_09645 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_19135 mdlC1; Benzoylformate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_05950 ilvX; Putative acetolactate synthase large subunit IlvX K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_06060 aruI2; putative 2-ketoarginine decarboxylase AruI K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_31110 ilvB2; Acetolactate synthase isozyme 1 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_22205 mdlC2; Benzoylformate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_23390 ilvG2; Acetolactate synthase isozyme 2 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_09650 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YIM_09655 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D YIM_09635 ilvD2; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D YIM_03090 ilvD1; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D YIM_12255 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YIM_09705 leuA2; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D YIM_02030 leuA1; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:amyy00300]
D YIM_06280 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D YIM_02055 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D YIM_02060 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D YIM_07080 dapA1; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YIM_26295 dapA3; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YIM_20290 dapA2; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YIM_29930 putative 5-dehydro-4-deoxyglucarate dehydratase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YIM_30700 dapA4; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YIM_33005 dapA5; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YIM_35825 dapA6; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YIM_35900 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D YIM_42515 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D YIM_31480 argD1; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D YIM_45610 dapC; putative N-succinyldiaminopimelate aminotransferase DapC K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D YIM_22920 aruH1; Arginine--pyruvate transaminase AruH K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D YIM_42505 dapE5; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D YIM_34775 dapE4; putative succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D YIM_13210 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D YIM_46105 lysA2; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D YIM_06275 lysA1; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D YIM_11495 btrK; L-glutamyl-[BtrI acyl-carrier protein] decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D YIM_48245 lysN4; 2-aminoadipate transaminase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D YIM_13875 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D YIM_13880 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:amyy00310]
D YIM_10820 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_12220 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_16710 mmgC9; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D YIM_12710 mmgC5; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D YIM_22715 mmgC13; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D YIM_44980 putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_09170 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_05920 fadJ1; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YIM_47300 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_09040 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05010 fadA1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05915 fadA2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14515 fadA3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14530 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_21940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_20775 caiD2; Carnitinyl-CoA dehydratase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_33185 paaJ3; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_39760 iaaM; Tryptophan 2-monooxygenase K00468 davB; lysine 2-monooxygenase [EC:1.13.12.2]
D YIM_39755 ramA6; (R)-stereoselective amidase K01506 davA; 5-aminopentanamidase [EC:3.5.1.30]
D YIM_41785 davT2; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D YIM_16720 gabT1; 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D YIM_14235 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YIM_05975 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YIM_21595 gabD4; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YIM_22015 gabD5; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YIM_01010 lhgO; L-2-hydroxyglutarate oxidase LhgO K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D YIM_25020 kamA; L-lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D YIM_43195 aldA4; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_06090 ald2; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21910 geoB1; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21995 geoB2; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_23080 puuC1; Aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_30345 geoB3; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:amyy00220]
D YIM_22900 argF1; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D YIM_32365 argF4; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D YIM_25760 argF2; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D YIM_31475 argF3; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D YIM_37585 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D YIM_31465 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D YIM_37940 arg; Arginase K01476 rocF; arginase [EC:3.5.3.1]
D YIM_39780 rocF2; Arginase K01476 rocF; arginase [EC:3.5.3.1]
D YIM_09150 rocF1; Arginase K01476 rocF; arginase [EC:3.5.3.1]
D YIM_44970 Amidinotransferase K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D YIM_37965 N(G),N(G)-dimethylarginine dimethylaminohydrolase K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D YIM_35735 atzF2; Allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D YIM_03850 ureC; Urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D YIM_03845 ureB1; Urease subunit beta 1 K01429 ureB; urease subunit beta [EC:3.5.1.5]
D YIM_03840 ureA; Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D YIM_00760 arcA; Arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D YIM_18920 nos; Nitric oxide synthase oxygenase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D YIM_46520 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D YIM_10570 glnA3; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_06610 glnA1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_06655 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_30760 puuA; Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_30935 glnA4; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_17845 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D YIM_17840 carA2; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D YIM_39105 gdh; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D YIM_27670 gdhA; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D YIM_25250 aspC1; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D YIM_44565 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D YIM_35770 argA; Amino-acid acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D YIM_31490 argJ; Arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D YIM_42550 putative acetyltransferase K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1]
D YIM_31485 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D YIM_31495 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D YIM_31480 argD1; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D YIM_23405 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:amyy00330]
D YIM_40085 crnA3; Creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D YIM_17525 crnA2; Creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D YIM_08805 crnA1; Creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D YIM_18400 tadA2; tRNA-specific adenosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D YIM_06065 apc1; Acetophenone carboxylase gamma subunit K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D YIM_06070 apc2; Acetophenone carboxylase delta subunit K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D YIM_37960 ldc2; Lysine/ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D YIM_14305 ldc1; Lysine/ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D YIM_14295 speE1; Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D YIM_31005 speE2; Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D YIM_14300 speH; S-adenosylmethionine decarboxylase proenzyme precursor K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D YIM_23100 bioK; L-Lysine-8-amino-7-oxononanoate aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D YIM_43195 aldA4; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_06090 ald2; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21910 geoB1; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21995 geoB2; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_23080 puuC1; Aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_30345 geoB3; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_25095 rebO; Flavin-dependent L-tryptophan oxidase RebO precursor K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D YIM_01385 aruI1; putative 2-ketoarginine decarboxylase AruI K12253 aruI; 5-guanidino-2-oxopentanoate decarboxylase [EC:4.1.1.75]
D YIM_31105 gbh; Guanidinobutyrase K25365 gbh; guanidinobutyrase / D-arginase [EC:3.5.3.7 3.5.3.10]
D YIM_42135 aam3; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_45660 aam5; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_29650 atzE; Biuret hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_23160 nylA2; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_26070 amiE; Aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_28355 gatA3; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_17265 nylA1; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_45840 puuC4; Aldehyde dehydrogenase PuuC K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D YIM_18920 nos; Nitric oxide synthase oxygenase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D YIM_44970 Amidinotransferase K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D YIM_37965 N(G),N(G)-dimethylarginine dimethylaminohydrolase K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D YIM_37940 arg; Arginase K01476 rocF; arginase [EC:3.5.3.1]
D YIM_39780 rocF2; Arginase K01476 rocF; arginase [EC:3.5.3.1]
D YIM_09150 rocF1; Arginase K01476 rocF; arginase [EC:3.5.3.1]
D YIM_30805 rocD2; Ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D YIM_45390 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D YIM_33965 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D YIM_45400 fadM3; Proline dehydrogenase 1 K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D YIM_24240 fadM1; Proline dehydrogenase 1 K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D YIM_05595 rocA1; 1-pyrroline-5-carboxylate dehydrogenase 1 K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D YIM_24235 rocA2; 1-pyrroline-5-carboxylate dehydrogenase 1 K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D YIM_38585 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D YIM_08980 proA1; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D YIM_41775 pip6; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D YIM_09260 pip3; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D YIM_06145 pip2; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D YIM_40620 pip5; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D YIM_25250 aspC1; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D YIM_44565 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D YIM_20765 Proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
C 00340 Histidine metabolism [PATH:amyy00340]
D YIM_27370 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D YIM_27375 hisE; Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D YIM_12785 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D YIM_12760 priA1; Phosphoribosyl isomerase A K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D YIM_12755 hisH; Imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D YIM_12775 hisF; Imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D YIM_12595 hisB; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D YIM_01470 pat1; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_15150 pat2; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_12590 hisC1; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_29495 hisC2; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_35495 cobD2; Threonine-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_42795 hisN; Histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D YIM_12580 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D YIM_14170 hutH2; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D YIM_06885 hutH1; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D YIM_25725 MIO-dependent tyrosine 2,3-aminomutase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D YIM_22770 hutH3; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D YIM_06890 hutU; Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D YIM_06905 hutI1; Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D YIM_43195 aldA4; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_06090 ald2; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21910 geoB1; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21995 geoB2; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_23080 puuC1; Aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_30345 geoB3; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_25095 rebO; Flavin-dependent L-tryptophan oxidase RebO precursor K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D YIM_27645 egtD; Histidine-specific methyltransferase EgtD K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
D YIM_27655 egtB; Iron(II)-dependent oxidoreductase EgtB K18912 egtB; gamma-glutamyl hercynylcysteine S-oxide synthase [EC:1.14.99.50]
D YIM_27650 egtC; Amidohydrolase EgtC K07008 egtC; gamma-glutamyl hercynylcysteine S-oxide hydrolase [EC:3.5.1.118]
C 00350 Tyrosine metabolism [PATH:amyy00350]
D YIM_25250 aspC1; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D YIM_44565 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D YIM_01470 pat1; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_15150 pat2; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_12590 hisC1; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_29495 hisC2; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_35495 cobD2; Threonine-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_05055 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D YIM_00810 hmgA; Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D YIM_30275 Fumarylacetoacetate (FAA) hydrolase family protein K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D YIM_25150 hypothetical protein K24287 lmbB2; L-tyrosine peroxygenase [EC:1.11.2.6]
D YIM_07890 ddc1; L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D YIM_25095 rebO; Flavin-dependent L-tryptophan oxidase RebO precursor K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D YIM_14950 Histamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D YIM_16730 Histamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D YIM_29540 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D YIM_23800 adh1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D YIM_15275 nphA1; 4-nitrophenol 2-monooxygenase, oxygenase component K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D YIM_23115 hpaC; 4-hydroxyphenylacetate 3-monooxygenase reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D YIM_30705 puuC3; Aldehyde dehydrogenase PuuC K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D YIM_30690 hpcE; Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D YIM_21440 rhmA2; 2-keto-3-deoxy-L-rhamnonate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D YIM_18940 rhmA1; 2-keto-3-deoxy-L-rhamnonate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D YIM_14235 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YIM_05975 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YIM_21595 gabD4; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YIM_22015 gabD5; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YIM_16040 tpl; Tyrosine phenol-lyase K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2]
D YIM_15590 xylB1; Aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D YIM_13660 mycothiol-dependent maleylpyruvate isomerase K16163 K16163; maleylpyruvate isomerase [EC:5.2.1.4]
D YIM_07070 mycothiol-dependent maleylpyruvate isomerase K16163 K16163; maleylpyruvate isomerase [EC:5.2.1.4]
D YIM_32710 mycothiol-dependent maleylpyruvate isomerase K16163 K16163; maleylpyruvate isomerase [EC:5.2.1.4]
C 00360 Phenylalanine metabolism [PATH:amyy00360]
D YIM_07890 ddc1; L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D YIM_14950 Histamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D YIM_16730 Histamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D YIM_25095 rebO; Flavin-dependent L-tryptophan oxidase RebO precursor K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D YIM_03020 paaK; Phenylacetate-coenzyme A ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D YIM_21840 Phenylacetate-coenzyme A ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D YIM_03025 paaI; Acyl-coenzyme A thioesterase PaaI K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D YIM_03045 paaA; 1,2-phenylacetyl-CoA epoxidase, subunit A K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D YIM_03050 paaB; 1,2-phenylacetyl-CoA epoxidase, subunit B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D YIM_03055 paaC; 1,2-phenylacetyl-CoA epoxidase, subunit C K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D YIM_03060 paaD; Putative 1,2-phenylacetyl-CoA epoxidase, subunit D K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D YIM_03065 paaE1; 1,2-phenylacetyl-CoA epoxidase, subunit E K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D YIM_42435 paaG4; 1,2-epoxyphenylacetyl-CoA isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D YIM_04070 echA1; putative enoyl-CoA hydratase echA6 K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D YIM_36795 echA8; putative enoyl-CoA hydratase echA8 K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D YIM_03040 paaZ1; Bifunctional protein PaaZ K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D YIM_44980 putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_09170 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_06505 fadB1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D YIM_03030 mmgB; putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D YIM_23565 paaH; 3-hydroxyadipyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D YIM_29300 fadB3; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D YIM_46355 fadB4; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D YIM_25250 aspC1; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D YIM_44565 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D YIM_01470 pat1; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_15150 pat2; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_12590 hisC1; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_29495 hisC2; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_35495 cobD2; Threonine-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_15590 xylB1; Aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D YIM_05055 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D YIM_23365 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D YIM_10010 katG1; Catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D YIM_24035 katG2; Catalase-peroxidase 2 K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D YIM_42135 aam3; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_45660 aam5; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_29650 atzE; Biuret hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_23160 nylA2; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_26070 amiE; Aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_28355 gatA3; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_17265 nylA1; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_25625 hcaC; 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D YIM_22020 thcD3; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D YIM_36765 thcD6; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D YIM_10650 thcD1; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D YIM_25620 bedA; Benzene 1,2-dioxygenase system ferredoxin--NAD(+) reductase subunit K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D YIM_30285 pcpB4; Pentachlorophenol 4-monooxygenase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D YIM_36220 pcpB6; Pentachlorophenol 4-monooxygenase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D YIM_27910 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D YIM_27900 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D YIM_27905 mhpF; Acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00380 Tryptophan metabolism [PATH:amyy00380]
D YIM_40065 kynA2; Tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D YIM_25130 kynA1; Tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D YIM_20245 Indoleamine 2,3-dioxygenase K00463 IDO; indoleamine 2,3-dioxygenase [EC:1.13.11.52]
D YIM_25120 nlhH6; Carboxylesterase NlhH K01432 AFMID; arylformamidase [EC:3.5.1.9]
D YIM_25105 kmo; Kynurenine 3-monooxygenase K00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9]
D YIM_40140 kynU3; Kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D YIM_25135 kynU1; Kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D YIM_10820 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_12220 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_16710 mmgC9; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D YIM_12710 mmgC5; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D YIM_22715 mmgC13; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D YIM_44980 putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_09170 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_05920 fadJ1; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YIM_47300 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_09040 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05010 fadA1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05915 fadA2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14515 fadA3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14530 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_21940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_20775 caiD2; Carnitinyl-CoA dehydratase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_33185 paaJ3; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_07890 ddc1; L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D YIM_25095 rebO; Flavin-dependent L-tryptophan oxidase RebO precursor K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D YIM_43195 aldA4; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_06090 ald2; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21910 geoB1; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21995 geoB2; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_23080 puuC1; Aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_30345 geoB3; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_14225 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D YIM_42135 aam3; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_45660 aam5; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_29650 atzE; Biuret hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_23160 nylA2; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_26070 amiE; Aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_28355 gatA3; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_17265 nylA1; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_02085 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
D YIM_10010 katG1; Catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D YIM_24035 katG2; Catalase-peroxidase 2 K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:amyy00400]
D YIM_39525 aroH; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YIM_14155 aroG2; Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YIM_12925 aroG1; Phospho-2-dehydro-3-deoxyheptonate aldolase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YIM_25990 aroF; Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YIM_17775 aroB1; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D YIM_17780 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D YIM_20100 lly; 4-hydroxyphenylpyruvate dioxygenase K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118]
D YIM_20095 aroE2; Quinate/shikimate dehydrogenase K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24]
D YIM_17770 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D YIM_31375 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D YIM_17765 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D YIM_12805 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D YIM_12335 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D YIM_12760 priA1; Phosphoribosyl isomerase A K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D YIM_12815 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D YIM_12825 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D YIM_12820 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D YIM_41985 Secreted chorismate mutase precursor K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D YIM_43650 Intracellular chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D YIM_23665 Intracellular chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D YIM_01720 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D YIM_03415 pheC; Cyclohexadienyl dehydratase precursor K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D YIM_00920 pheA; Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D YIM_25250 aspC1; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D YIM_44565 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D YIM_01470 pat1; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_15150 pat2; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_12590 hisC1; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_29495 hisC2; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_35495 cobD2; Threonine-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:amyy00410]
D YIM_02680 panD; Aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D YIM_20840 gadB; Glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D YIM_05970 davT1; 5-aminovalerate aminotransferase DavT K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YIM_38235 argD2; Acetylornithine aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YIM_41785 davT2; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D YIM_16720 gabT1; 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D YIM_26960 gabT2; 4-aminobutyrate aminotransferase GabT K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D YIM_14950 Histamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D YIM_16730 Histamine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21]
D YIM_43195 aldA4; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_06090 ald2; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21910 geoB1; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21995 geoB2; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_23080 puuC1; Aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_30345 geoB3; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_02675 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D YIM_38260 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D YIM_38255 N-carbamoyl-D-amino acid hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D YIM_06895 amaB; N-carbamoyl-L-amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D YIM_23385 Putative hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D YIM_44980 putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_09170 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_05920 fadJ1; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YIM_05110 mmgC2; Acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D YIM_38230 mmsA2; Methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D YIM_16870 mmsA1; Methylmalonate-semialdehyde dehydrogenase [acylating] K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:amyy00430]
D YIM_20840 gadB; Glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D YIM_00505 ywrD1; Putative gamma-glutamyltransferase YwrD K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YIM_17895 ggt; Gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YIM_25165 ywrD2; Putative gamma-glutamyltransferase YwrD K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YIM_03580 tauD1; Alpha-ketoglutarate-dependent taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D YIM_05785 ald1; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D YIM_26960 gabT2; 4-aminobutyrate aminotransferase GabT K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D YIM_39105 gdh; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D YIM_14860 ackA1; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D YIM_22255 ackA2; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:amyy00440]
D YIM_29505 pphA; Phosphonopyruvate hydrolase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9]
D YIM_29485 hypothetical protein K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82]
D YIM_29455 gapN; NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00206 phnY; phosphonoacetaldehyde dehydrogenase [EC:1.2.1.-]
C 00450 Selenocompound metabolism [PATH:amyy00450]
D YIM_05040 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D YIM_00260 metC; Cystathionine beta-lyase MetC K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D YIM_27390 metH1; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D YIM_36155 metH2; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D YIM_18315 metE1; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D YIM_36200 mccB; Cystathionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D YIM_18165 sufS2; Cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D YIM_12585 csd2; putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D YIM_48225 trxB3; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D YIM_40615 cysNC3; Bifunctional enzyme CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D YIM_29515 cysNC1; Bifunctional enzyme CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D YIM_38355 cysNC2; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D YIM_40610 cysD4; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YIM_38350 cysD3; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YIM_29510 cysD1; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YIM_36860 cysD2; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YIM_04655 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:amyy00460]
D YIM_42920 bglX3; Periplasmic beta-glucosidase precursor K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YIM_05495 bglB1; Thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YIM_22095 bglB4; Thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YIM_36940 bglB5; Thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YIM_37180 bglB6; Thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YIM_41945 bglA8; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_00390 bglA1; Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_19805 bglB2; Beta-glucosidase B K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_19860 bglB3; Beta-glucosidase B K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_32605 bglA4; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_32815 bglA5; Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_26205 bglA2; Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_36960 bglA6; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_14225 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D YIM_00505 ywrD1; Putative gamma-glutamyltransferase YwrD K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YIM_17895 ggt; Gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YIM_25165 ywrD2; Putative gamma-glutamyltransferase YwrD K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YIM_10605 glyA2; Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YIM_02555 glyA1; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YIM_25600 glyA4; Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YIM_20505 glyA3; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:amyy00470]
D YIM_43890 alr2; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D YIM_20500 alr1; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D YIM_48250 ddl2; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YIM_10210 ddl1; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YIM_46520 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D YIM_41620 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D YIM_13890 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D YIM_17535 catB2; Muconate cycloisomerase 1 K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D YIM_40855 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D YIM_25325 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D YIM_45655 dcyD2; D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D YIM_13210 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D YIM_46105 lysA2; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D YIM_06275 lysA1; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D YIM_11495 btrK; L-glutamyl-[BtrI acyl-carrier protein] decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D YIM_31105 gbh; Guanidinobutyrase K25365 gbh; guanidinobutyrase / D-arginase [EC:3.5.3.7 3.5.3.10]
D YIM_20765 Proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
D YIM_20755 hcnB; Hydrogen cyanide synthase subunit HcnB K22549 lhpC; D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-]
D YIM_20745 hcnC3; Hydrogen cyanide synthase subunit HcnC precursor K21061 lhpB; D-hydroxyproline dehydrogenase subunit beta [EC:1.5.99.-]
D YIM_20750 hcnA; Hydrogen cyanide synthase subunit HcnA K22550 lhpD; D-hydroxyproline dehydrogenase subunit gamma
D YIM_20760 dapAL; putative DapA-like lyase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D YIM_23365 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:amyy00480]
D YIM_00505 ywrD1; Putative gamma-glutamyltransferase YwrD K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YIM_17895 ggt; Gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YIM_25165 ywrD2; Putative gamma-glutamyltransferase YwrD K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YIM_45165 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D YIM_14130 ybdK3; Carboxylate-amine ligase YbdK K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D YIM_02910 ybdK1; Carboxylate-amine ligase YbdK K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D YIM_37610 ybdK4; Carboxylate-amine ligase YbdK K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D YIM_27660 gshA; Glutamate--cysteine ligase GshA K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D YIM_42425 pepA2; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D YIM_12235 pepA1; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D YIM_39045 pepN3; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D YIM_43455 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D YIM_01870 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D YIM_00020 gntZ; 6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D YIM_18065 zwf2; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D YIM_10455 zwf1; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D YIM_09470 gpx2; Hydroperoxy fatty acid reductase gpx2 K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D YIM_37960 ldc2; Lysine/ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D YIM_14305 ldc1; Lysine/ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D YIM_14295 speE1; Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D YIM_31005 speE2; Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:amyy00515]
D YIM_04605 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:amyy00514]
D YIM_04605 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:amyy00511]
D YIM_40265 nedA3; Sialidase precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D YIM_15935 nedA1; Sialidase precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D YIM_20280 nedA2; Sialidase precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D YIM_36950 lacZ; Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D YIM_38420 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D YIM_04580 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D YIM_31605 exo_I; Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D YIM_20875 csxA1; Exo-beta-D-glucosaminidase precursor K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D YIM_04540 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D YIM_37245 hypothetical protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D YIM_23505 Ricin-type beta-trefoil lectin domain protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D YIM_43305 hypothetical protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis [PATH:amyy00540]
D YIM_33435 gmhA1; Phosphoheptose isomerase 1 K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D YIM_33430 hldE; Bifunctional protein HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
C 00542 O-Antigen repeat unit biosynthesis [PATH:amyy00542]
D YIM_06345 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:amyy00541]
D YIM_04445 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YIM_45375 hypothetical protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YIM_44855 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YIM_13765 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YIM_01065 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YIM_01185 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D YIM_00490 tuaD1; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YIM_33415 tuaD2; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YIM_44825 rmlA3; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YIM_11655 rmlA1; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YIM_22730 rmlA2; Glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YIM_42635 strE; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D YIM_33480 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D YIM_21550 rmlC2; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D YIM_42630 strL; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D YIM_21585 rfbF; Glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D YIM_36685 arnB5; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D YIM_09100 yvyI; Putative mannose-6-phosphate isomerase YvyI K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D YIM_05485 manA1; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D YIM_43100 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YIM_05470 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YIM_39605 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D YIM_01105 arnB2; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D YIM_21480 arnB4; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D YIM_39545 epsN; Putative pyridoxal phosphate-dependent aminotransferase EpsN K13010 per; perosamine synthetase [EC:2.6.1.102]
D YIM_04730 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D YIM_44895 fdtC; dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose 3-N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:amyy00550]
D YIM_06425 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D YIM_45480 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D YIM_13905 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D YIM_13890 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D YIM_13875 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D YIM_48250 ddl2; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YIM_10210 ddl1; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YIM_13880 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D YIM_38140 uppS2; Decaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D YIM_24265 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YIM_13885 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D YIM_13900 murG1; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D YIM_36550 murG2; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D YIM_35640 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D YIM_00185 pbpA1; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D YIM_43375 dacF; D-alanyl-D-alanine carboxypeptidase DacF precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YIM_02585 dacB; D-alanyl-D-alanine carboxypeptidase DacB precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D YIM_36565 vanYB1; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D YIM_39210 vanYB2; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:amyy00552]
D YIM_24265 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YIM_06345 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D YIM_44960 tagA; Putative N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D YIM_01070 pimA1; GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:amyy00543]
D YIM_06345 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D YIM_02825 patA; Peptidoglycan O-acetyltransferase K19294 algI; alginate O-acetyltransferase complex protein AlgI
D YIM_41075 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:amyy00730]
D YIM_03330 thiC; Phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D YIM_03310 thiD1; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D YIM_03325 thiD2; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D YIM_09525 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YIM_03285 hcnC1; Hydrogen cyanide synthase subunit HcnC precursor K03153 thiO; glycine oxidase [EC:1.4.3.19]
D YIM_31140 dxs4; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D YIM_03295 thiG1; Thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D YIM_36140 thiG2; Thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D YIM_03280 thiE; Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D YIM_10230 thiL2; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D YIM_03255 thiL1; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D YIM_05605 rsgA1; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D YIM_07900 rsgA2; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D YIM_44145 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D YIM_00930 tenA; Thiaminase-2 K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:amyy00740]
D YIM_17930 ribBA3; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D YIM_08790 ribBA1; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D YIM_07405 flavin mononucleotide phosphatase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D YIM_17380 ribBA2; Riboflavin biosynthesis protein RibBA K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D YIM_17935 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D YIM_17925 ribE; Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D YIM_35930 ribF; Riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D YIM_23115 hpaC; 4-hydroxyphenylacetate 3-monooxygenase reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D YIM_02100 azo1; FMN-dependent NADPH-azoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D YIM_27105 ssuE1; FMN reductase (NADPH) K00299 ssuE; FMN reductase [EC:1.5.1.38]
D YIM_37535 ssuE2; FMN reductase (NADPH) K00299 ssuE; FMN reductase [EC:1.5.1.38]
D YIM_32125 nudF4; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:amyy00750]
D YIM_13655 pdxH2; Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D YIM_03885 pdxH1; Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D YIM_45430 ydbC5; Putative oxidoreductase YdbC K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D YIM_11265 ydbC1; Putative oxidoreductase YdbC K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D YIM_22990 ydbC3; Putative oxidoreductase YdbC K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D YIM_39705 ydbC4; Putative oxidoreductase YdbC K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D YIM_03790 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D YIM_06285 thrC1; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D YIM_32360 thrC2; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D YIM_38485 thrC3; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D YIM_17360 pdxS; Pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D YIM_17410 pdxT; Glutamine amidotransferase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:amyy00760]
D YIM_12490 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D YIM_12485 nadA; Quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D YIM_12495 nadC; Nicotinate-nucleotide pyrophosphorylase [carboxylating] K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D YIM_41700 pncB1; Nicotinate phosphoribosyltransferase pncB1 K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D YIM_43090 punA; Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D YIM_47120 yhcR; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D YIM_18600 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D YIM_03570 nagD; Ribonucleotide monophosphatase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D YIM_38535 nadD; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D YIM_42010 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D YIM_06550 nadE; Glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D YIM_35755 cinA; Putative competence-damage inducible protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D YIM_41705 nicF2; Maleamate amidohydrolase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D YIM_19845 rutB; Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D YIM_31395 ppnK; Inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D YIM_38475 sthA; Soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D YIM_11930 pntAA; NAD(P) transhydrogenase subunit alpha part 1 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D YIM_11935 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D YIM_11940 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D YIM_29130 nicX; 2,5-dihydroxypyridine 5,6-dioxygenase K18028 nicX; 2,5-dihydroxypyridine 5,6-dioxygenase [EC:1.13.11.9]
D YIM_29085 nicD; N-formylmaleamate deformylase K15357 nicD; N-formylmaleamate deformylase [EC:3.5.1.106]
D YIM_29090 nicF1; Maleamate amidohydrolase K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107]
D YIM_06000 maiA1; Maleate isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D YIM_29125 maiA2; Maleate isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D YIM_14235 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YIM_05975 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YIM_21595 gabD4; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YIM_22015 gabD5; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:amyy00770]
D YIM_45885 ydaP2; Putative thiamine pyrophosphate-containing protein YdaP K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_09645 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_19135 mdlC1; Benzoylformate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_05950 ilvX; Putative acetolactate synthase large subunit IlvX K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_06060 aruI2; putative 2-ketoarginine decarboxylase AruI K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_31110 ilvB2; Acetolactate synthase isozyme 1 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_22205 mdlC2; Benzoylformate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_23390 ilvG2; Acetolactate synthase isozyme 2 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YIM_09650 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YIM_09655 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D YIM_09635 ilvD2; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D YIM_03090 ilvD1; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D YIM_41770 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D YIM_19015 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D YIM_30600 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D YIM_22440 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D YIM_02675 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D YIM_00910 coaA1; Pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D YIM_17870 coaBC; Coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D YIM_11010 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D YIM_31945 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D YIM_04035 sfp; 4'-phosphopantetheinyl transferase sfp K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D YIM_12255 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YIM_38260 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D YIM_38255 N-carbamoyl-D-amino acid hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D YIM_06895 amaB; N-carbamoyl-L-amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D YIM_23385 Putative hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D YIM_02680 panD; Aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D YIM_43195 aldA4; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_06090 ald2; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21910 geoB1; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21995 geoB2; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_23080 puuC1; Aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_30345 geoB3; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:amyy00780]
D YIM_11970 kasA; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_25680 fabF1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_25685 fabF2; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_25700 fabF4; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_26850 fabF5; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_26860 fabF6; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_26865 fabF7; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_26875 fabF8; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_26880 fabF9; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_26885 fabF10; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_39345 ppsA5; Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_46100 fabG40; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_47295 fabG42; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_01125 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_18490 novJ1; Short-chain reductase protein NovJ K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_17230 fabG10; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_21810 fabG15; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_23145 tsaC2; 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_24145 fabG17; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_25690 fabG19; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_26815 fabG21; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_19560 fabG13; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_33180 fabG30; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_48000 fabG43; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_48085 bdcA4; Cyclic-di-GMP-binding biofilm dispersal mediator protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_30605 fabG29; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_34675 fabG31; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_38765 ycdF2; Glucose 1-dehydrogenase 2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_43800 bdcA3; Cyclic-di-GMP-binding biofilm dispersal mediator protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_21250 xecD1; 2-(R)-hydroxypropyl-CoM dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_26905 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YIM_26820 fabZ1; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YIM_26825 fabZ2; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YIM_26900 fabZ3; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YIM_01560 bioF1; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D YIM_11825 bioF2; 8-amino-7-oxononanoate synthase 1 K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D YIM_12445 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D YIM_12455 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D YIM_12460 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D YIM_42835 birA7; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D YIM_40490 dorA; Dimethyl sulfoxide/trimethylamine N-oxide reductase precursor K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
C 00785 Lipoic acid metabolism [PATH:amyy00785]
D YIM_12190 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D YIM_10610 lipA1; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D YIM_12165 lipA2; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D YIM_10820 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_12220 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_16260 aceE2; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YIM_12030 aceE1; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YIM_33085 pdhC1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YIM_35285 acoC1; Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YIM_12215 dlaT; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YIM_05720 kgd; Multifunctional 2-oxoglutarate metabolism enzyme K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D YIM_35415 bkdA1; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D YIM_47235 bkdA2; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D YIM_35410 bkdB1; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D YIM_47240 bkdB2; 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D YIM_35405 bkdC; Dihydrolipoyllysine-residue acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D YIM_47245 pdhC3; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D YIM_10590 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D YIM_10595 gcvT1; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D YIM_10600 gcvH1; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D YIM_27770 gcvH2; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:amyy00790]
D YIM_02630 folE1; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D YIM_16950 folE2; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D YIM_40240 phoD4; Alkaline phosphatase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D YIM_43815 phoD5; Alkaline phosphatase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D YIM_01930 phoD1; Alkaline phosphatase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D YIM_16800 phoD2; Alkaline phosphatase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D YIM_38655 phoD3; Alkaline phosphatase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D YIM_02640 folB; putative dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D YIM_02645 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D YIM_02635 folP1; Dihydropteroate synthase 1 K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D YIM_35440 folP2; Inactive dihydropteroate synthase 2 K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D YIM_33860 folA2; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D YIM_38675 fgs; Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D YIM_17930 ribBA3; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D YIM_08790 ribBA1; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D YIM_00160 pabA; Aminodeoxychorismate synthase component 2 K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D YIM_04625 pabB; Aminodeoxychorismate synthase component 1 K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D YIM_46325 dat; D-alanine aminotransferase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D YIM_05330 Putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D YIM_03560 moaA1; Cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D YIM_03535 moaC2; Cyclic pyranopterin monophosphate synthase accessory protein 2 K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D YIM_03380 moeA1; Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D YIM_04450 moeA2; Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D YIM_27605 mobA; Molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:amyy00670]
D YIM_33860 folA2; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D YIM_43520 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D YIM_10605 glyA2; Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YIM_02555 glyA1; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YIM_25600 glyA4; Serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YIM_20505 glyA3; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YIM_43600 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D YIM_43595 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D YIM_40225 arnA; Bifunctional polymyxin resistance protein ArnA K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D YIM_17900 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D YIM_10595 gcvT1; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D YIM_27390 metH1; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D YIM_36155 metH2; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D YIM_33865 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D YIM_35845 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D YIM_45500 purU2; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D YIM_25560 purU1; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D YIM_13005 metF1; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D YIM_36160 metF2; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D YIM_04440 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D YIM_32285 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:amyy00860]
D YIM_09720 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YIM_45305 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D YIM_45250 hemL2; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D YIM_21545 hemL1; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D YIM_45290 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D YIM_45300 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D YIM_42115 bifunctional uroporphyrinogen-III synthetase/response regulator domain protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D YIM_42155 bifunctional uroporphyrinogen-III synthetase/response regulator domain protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D YIM_30995 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D YIM_30990 hemY; Protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D YIM_36290 crtN; Dehydrosqualene desaturase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D YIM_27525 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D YIM_30985 Chlorite dismutase precursor K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D YIM_45295 cysG2; Siroheme synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D YIM_27805 cysG1; Siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D YIM_18085 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D YIM_18125 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D YIM_35540 cobI; Precorrin-2 C(20)-methyltransferase K13540 cobIJ; precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase [EC:2.1.1.130 2.1.1.131]
D YIM_35550 ferredoxin-nitrite reductase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D YIM_35520 cobM; Precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D YIM_40460 sumT; Uroporphyrinogen-III C-methyltransferase K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D YIM_35530 cobK; Precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D YIM_35515 cobL; Precorrin-6Y C(5,15)-methyltransferase [decarboxylating] K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D YIM_35545 cobH; Precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D YIM_35500 cobB3; Cobyrinic acid A,C-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D YIM_35575 cobN; Aerobic cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D YIM_06420 Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D YIM_35505 cobO; Cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D YIM_35465 cobQ; Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D YIM_41905 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D YIM_35470 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D YIM_35475 cobU; Bifunctional adenosylcobalamin biosynthesis protein CobU K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D YIM_35485 cobS; Cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D YIM_12260 cobT1; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D YIM_35480 cobT2; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D YIM_42000 pspA4; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D YIM_35510 bchI2; Magnesium-chelatase 38 kDa subunit K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D YIM_27500 bchI1; Magnesium-chelatase 38 kDa subunit K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D YIM_03710 pbsA1; Heme oxygenase 1 K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20]
D YIM_28015 Pyridoxamine 5'-phosphate oxidase K23825 K23825; F420H(2)-dependent biliverdin reductase [EC:1.3.98.-]
D YIM_32610 uidA4; Beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D YIM_00755 bfrB; Ferritin BfrB K22336 bfrB; bacterioferritin B [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:amyy00130]
D YIM_45135 ubiE10; Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D YIM_23030 dhbC2; Isochorismate synthase DhbC K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D YIM_04015 dhbC1; Isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2]
D YIM_26045 dhbC3; Isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2]
D YIM_45170 menD2; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D YIM_23005 menD1; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D YIM_10825 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D YIM_03420 ykfB1; L-Ala-D/L-Glu epimerase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D YIM_45180 menE; 2-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D YIM_45175 menB3; 1,4-Dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D YIM_45190 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D YIM_35720 add2; Aminodeoxyfutalosine deaminase K18286 add; aminodeoxyfutalosine deaminase [EC:3.5.4.40]
D YIM_14385 kefF; Glutathione-regulated potassium-efflux system ancillary protein KefF K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D YIM_36090 qorB1; Quinone oxidoreductase 2 K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D YIM_43125 qorB2; Quinone oxidoreductase 2 K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D YIM_05055 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:amyy00900]
D YIM_31140 dxs4; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D YIM_11735 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D YIM_02850 ispD1; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D YIM_12265 ispD2; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D YIM_33090 ispD3; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D YIM_04680 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D YIM_02845 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D YIM_11745 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D YIM_05275 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D YIM_47300 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_09040 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05010 fadA1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05915 fadA2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14515 fadA3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14530 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_21940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_20775 caiD2; Carnitinyl-CoA dehydratase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_33185 paaJ3; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_21935 hypothetical protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D YIM_10900 idi; Isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D YIM_12985 (2E,6E)-farnesyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D YIM_28150 (2E,6E)-farnesyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D YIM_05135 uppS1; (2Z,6E)-farnesyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D YIM_38140 uppS2; Decaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:amyy00909]
D YIM_39645 cyc2; Germacradienol/geosmin synthase K10187 cyc2; germacradienol/geosmin synthase [EC:4.2.3.22 4.2.3.75 4.1.99.16]
D YIM_15135 shc; Squalene--hopene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129]
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:amyy00906]
D YIM_12975 crtB; All-trans-phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D YIM_12980 carA1; zeta-carotene-forming phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D YIM_18245 crtL; Lycopene beta cyclase K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:amyy00903]
D YIM_43195 aldA4; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_06090 ald2; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21910 geoB1; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21995 geoB2; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_23080 puuC1; Aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_30345 geoB3; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_29395 limB8; Limonene 1,2-monooxygenase K14733 limB; limonene 1,2-monooxygenase [EC:1.14.13.107]
D YIM_18340 mlhB1; Monoterpene epsilon-lactone hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D YIM_22075 mlhB2; Monoterpene epsilon-lactone hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D YIM_32910 mlhB3; Monoterpene epsilon-lactone hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation [PATH:amyy00907]
D YIM_44980 putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_09170 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_05920 fadJ1; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YIM_18375 gdhIV2; Glucose 1-dehydrogenase 4 K13775 atuG; citronellol/citronellal dehydrogenase
D YIM_21990 putative NAD-dependent oxidoreductase K13775 atuG; citronellol/citronellal dehydrogenase
D YIM_42825 yngG3; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D YIM_29905 yngG1; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D YIM_34835 yngG2; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D YIM_10125 pcaF; Beta-ketoadipyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YIM_31060 paaJ2; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures [PATH:amyy01052]
D YIM_39540 rebG5; 4'-demethylrebeccamycin synthase K16388 amphDI; polyene glycosyltransferase
D YIM_39550 Cytochrome P450-SU1 K16389 amphN; cytochrome P450 monooxygenase
D YIM_39555 penM; Pentalenolactone synthase K16390 amphL; cytochrome P450 monooxygenase
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins [PATH:amyy01051]
D YIM_39445 rifL; Putative UDP-kanosamine synthase oxidoreductase subunit K16015 rifL; oxidoreductase [EC:1.1.1.-]
D YIM_39450 rifK; 3-amino-5-hydroxybenzoate synthase K16016 rifK; 3-amino-5-hydroxybenzoate synthase [EC:4.2.1.144 2.6.1.-]
D YIM_39440 gph4; Phosphoglycolate phosphatase K16017 rifM; AHBA synthesis associated protein
D YIM_39455 rifN; Kanosamine kinase K16018 rifN; kanosamine 6-kinase [EC:2.7.1.179]
D YIM_18080 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_12630 fas1; Ferredoxin fas2 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_12635 fas2; putative 33.6 kDa protein in fasciation locus precursor K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_20535 dxs1; 1-deoxy-D-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_20550 dxs2; 1-deoxy-D-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_20555 tktB1; Transketolase 2 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_30010 dxs3; 1-deoxy-D-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_30015 tktB2; Transketolase 2 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YIM_39435 aroB2; 3-dehydroquinate synthase K16020 rifG; 5-deoxy-5-amino-3-dehydroquinate synthase
D YIM_39460 yqhS; 3-dehydroquinate dehydratase K16021 rifJ; 5-deoxy-5-amino-3-dehydroquinate dehydratase
C 01059 Biosynthesis of enediyne antibiotics [PATH:amyy01059]
D YIM_40785 ppsA6; Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA K15314 sgcE; enediyne polyketide synthase
D YIM_40780 1,4-dihydroxy-2-naphthoyl-CoA hydrolase K15315 sgcE10; enediyne core biosynthesis thioesterase
D YIM_42885 Fluoroacetate dehalogenase K21159 sgcF; epoxide hydrolase
D YIM_18405 Fluoroacetate dehalogenase K21159 sgcF; epoxide hydrolase
D YIM_04210 dhmA2; Haloalkane dehalogenase K21159 sgcF; epoxide hydrolase
D YIM_33920 Soluble epoxide hydrolase K21159 sgcF; epoxide hydrolase
D YIM_24530 haloalkane dehalogenase K21159 sgcF; epoxide hydrolase
D YIM_25920 hypothetical protein K21159 sgcF; epoxide hydrolase
D YIM_26600 hypothetical protein K21159 sgcF; epoxide hydrolase
D YIM_29860 Soluble epoxide hydrolase K21159 sgcF; epoxide hydrolase
D YIM_41025 hypothetical protein K21160 sgcE2; enediyne biosynthesis protein E2
D YIM_41020 hypothetical protein K21161 sgcE3; enediyne biosynthesis protein E3
D YIM_41015 ASPIC and UnbV K21162 sgcE4; enediyne biosynthesis protein E4
D YIM_41010 hypothetical protein K21163 sgcE5; enediyne biosynthesis protein E5
D YIM_41005 Epi-isozizaene 5-monooxygenase/(E)-beta-farnesene synthase K21164 sgcE7; enediyne biosynthesis protein E7
D YIM_41000 hypothetical protein K21165 sgcE8; enediyne biosynthesis protein E8
D YIM_40995 choA2; Cholesterol oxidase precursor K21166 sgcE9; enediyne biosynthesis protein E9
D YIM_40975 hypothetical protein K21167 sgcE11; enediyne biosynthesis protein E11
D YIM_40825 MIO-dependent tyrosine 2,3-aminomutase K21181 sgcC4; MIO-dependent L-tyrosine 2,3-aminomutase [EC:5.4.3.6]
D YIM_40830 lgrB11; Linear gramicidin synthase subunit B K21182 sgcC1; (S)-beta-tyrosine adenylation enzyme [EC:6.2.1.-]
D YIM_16050 lodB; Putative FAD-dependent oxidoreductase LodB K16431 cepH; FAD-dependent halogenase [EC:1.14.19.-]
D YIM_40820 nphA2; 4-nitrophenol 2-monooxygenase, oxygenase component K21184 sgcC; two-component FAD-dependent monooxygenase [EC:1.14.14.15 1.14.14.-]
D YIM_40775 hsaB2; Flavin-dependent monooxygenase, reductase subunit HsaB K21185 sgcE6; flavin reductase
D YIM_40805 lgrB10; Linear gramicidin synthase subunit B K21186 sgcC5; condensation enzyme
D YIM_37285 Cytochrome P450 107B1 K20420 ncsB3; 2-hydroxy-5-methyl-1-naphthoate 7-hydroxylase [EC:1.14.15.31]
D YIM_40790 Cytochrome P450 107B1 K20420 ncsB3; 2-hydroxy-5-methyl-1-naphthoate 7-hydroxylase [EC:1.14.15.31]
D YIM_09465 dnrK1; Carminomycin 4-O-methyltransferase K20421 ncsB1; 2,7-dihydroxy-5-methyl-1-naphthoate 7-O-methyltransferase [EC:2.1.1.303]
D YIM_15125 dnrK2; Carminomycin 4-O-methyltransferase K20421 ncsB1; 2,7-dihydroxy-5-methyl-1-naphthoate 7-O-methyltransferase [EC:2.1.1.303]
C 01056 Biosynthesis of type II polyketide backbone [PATH:amyy01056]
D YIM_23710 Actinorhodin polyketide synthase acyl carrier protein K05553 actI3; minimal PKS acyl carrier protein
C 01057 Biosynthesis of type II polyketide products [PATH:amyy01057]
D YIM_19405 Metallo-beta-lactamase superfamily protein K05555 actIV; cyclase [EC:4.-.-.-]
D YIM_22710 lcdH1; L-carnitine dehydrogenase K05556 actVI1; ketoreductase RED1 [EC:1.1.1.-]
D YIM_38365 hypothetical protein K14627 actVI3; dehydratase [EC:4.2.1.-]
C 00253 Tetracycline biosynthesis
D YIM_23710 Actinorhodin polyketide synthase acyl carrier protein K05553 actI3; minimal PKS acyl carrier protein
C 00523 Polyketide sugar unit biosynthesis [PATH:amyy00523]
D YIM_44825 rmlA3; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YIM_11655 rmlA1; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YIM_22730 rmlA2; Glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YIM_42635 strE; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D YIM_33480 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D YIM_21550 rmlC2; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D YIM_42630 strL; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D YIM_04410 wbiB1; dTDP-L-rhamnose 4-epimerase K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25]
D YIM_11645 NDP-hexose 2,3-dehydratase K16435 evaA; dTDP-4-dehydro-6-deoxy-alpha-D-glucopyranose 2,3-dehydratase [EC:4.2.1.159]
D YIM_08355 NDP-hexose 2,3-dehydratase K16435 evaA; dTDP-4-dehydro-6-deoxy-alpha-D-glucopyranose 2,3-dehydratase [EC:4.2.1.159]
D YIM_22855 NDP-hexose 2,3-dehydratase K16435 evaA; dTDP-4-dehydro-6-deoxy-alpha-D-glucopyranose 2,3-dehydratase [EC:4.2.1.159]
D YIM_08365 rmlC1; dTDP-4-dehydrorhamnose 3,5-epimerase K16438 evaD; 5-epimerase [EC:5.1.3.-]
D YIM_05675 novW; dTDP-4-dehydrorhamnose 3-epimerase K16438 evaD; 5-epimerase [EC:5.1.3.-]
D YIM_11650 afr3; 1,5-anhydro-D-fructose reductase K13327 spnN; dTDP-3,4-didehydro-2,6-dideoxy-alpha-D-glucose 3-reductase [EC:1.1.1.384]
D YIM_08350 afr1; 1,5-anhydro-D-fructose reductase K13327 spnN; dTDP-3,4-didehydro-2,6-dideoxy-alpha-D-glucose 3-reductase [EC:1.1.1.384]
D YIM_22845 gfo2; Glucose--fructose oxidoreductase precursor K13327 spnN; dTDP-3,4-didehydro-2,6-dideoxy-alpha-D-glucose 3-reductase [EC:1.1.1.384]
D YIM_11615 fdtB1; dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase K16436 evaB; dTDP-3-amino-2,3,6-trideoxy-4-keto-D-glucose/dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose/dTDP-2,6-dideoxy-D-kanosamine transaminase [EC:2.6.1.- 2.6.1.106]
D YIM_22860 fdtB2; dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase K16436 evaB; dTDP-3-amino-2,3,6-trideoxy-4-keto-D-glucose/dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose/dTDP-2,6-dideoxy-D-kanosamine transaminase [EC:2.6.1.- 2.6.1.106]
C 01054 Nonribosomal peptide structures [PATH:amyy01054]
D YIM_40855 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D YIM_25325 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:amyy01053]
D YIM_23030 dhbC2; Isochorismate synthase DhbC K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D YIM_04015 dhbC1; Isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2]
D YIM_26045 dhbC3; Isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2]
D YIM_26035 dhbB2; Isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D YIM_26050 dhbA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D YIM_26040 dhbE; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:amyy01055]
D YIM_21185 Lactate 2-monooxygenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D YIM_22225 Alpha-pyrone synthesis polyketide synthase-like Pks11 K16424 dpgA; 3,5-dihydroxyphenylacetyl-CoA synthase [EC:2.3.1.246]
D YIM_22195 caiD4; Carnitinyl-CoA dehydratase K16426 dpgD; dehydration protein DpgD
D YIM_22215 caiD5; Carnitinyl-CoA dehydratase K16427 dpgC; (3,5-dihydroxyphenyl)acetyl-CoA 1,2-dioxygenase [EC:1.13.11.80]
D YIM_16050 lodB; Putative FAD-dependent oxidoreductase LodB K16431 cepH; FAD-dependent halogenase [EC:1.14.19.-]
D YIM_42635 strE; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D YIM_33480 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D YIM_11645 NDP-hexose 2,3-dehydratase K16435 evaA; dTDP-4-dehydro-6-deoxy-alpha-D-glucopyranose 2,3-dehydratase [EC:4.2.1.159]
D YIM_08355 NDP-hexose 2,3-dehydratase K16435 evaA; dTDP-4-dehydro-6-deoxy-alpha-D-glucopyranose 2,3-dehydratase [EC:4.2.1.159]
D YIM_22855 NDP-hexose 2,3-dehydratase K16435 evaA; dTDP-4-dehydro-6-deoxy-alpha-D-glucopyranose 2,3-dehydratase [EC:4.2.1.159]
D YIM_11615 fdtB1; dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase K16436 evaB; dTDP-3-amino-2,3,6-trideoxy-4-keto-D-glucose/dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose/dTDP-2,6-dideoxy-D-kanosamine transaminase [EC:2.6.1.- 2.6.1.106]
D YIM_22860 fdtB2; dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase K16436 evaB; dTDP-3-amino-2,3,6-trideoxy-4-keto-D-glucose/dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose/dTDP-2,6-dideoxy-D-kanosamine transaminase [EC:2.6.1.- 2.6.1.106]
D YIM_22810 ubiG1; Ubiquinone biosynthesis O-methyltransferase K16437 evaC; methylation protein EvaC
D YIM_08365 rmlC1; dTDP-4-dehydrorhamnose 3,5-epimerase K16438 evaD; 5-epimerase [EC:5.1.3.-]
D YIM_05675 novW; dTDP-4-dehydrorhamnose 3-epimerase K16438 evaD; 5-epimerase [EC:5.1.3.-]
D YIM_26400 novM3; L-noviosyl transferase K16444 gtfB; vancomycin aglycone glucosyltransferase [EC:2.4.1.310]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:amyy00946]
D YIM_42920 bglX3; Periplasmic beta-glucosidase precursor K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YIM_05495 bglB1; Thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YIM_22095 bglB4; Thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YIM_36940 bglB5; Thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YIM_37180 bglB6; Thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YIM_41945 bglA8; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_00390 bglA1; Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_19805 bglB2; Beta-glucosidase B K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_19860 bglB3; Beta-glucosidase B K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_32605 bglA4; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_32815 bglA5; Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_26205 bglA2; Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_36960 bglA6; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_06160 Bacterial alpha-L-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D YIM_16225 Bacterial alpha-L-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D YIM_16795 Bacterial alpha-L-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D YIM_25395 Bacterial alpha-L-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D YIM_22085 Bacterial alpha-L-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D YIM_22100 Bacterial alpha-L-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D YIM_36925 Bacterial alpha-L-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids [PATH:amyy00996]
D YIM_23925 Hydroxycinnamoyl-CoA hydratase-lyase K18383 ferB; feruloyl-CoA hydratase/lyase [EC:4.1.2.61]
C 00232 Caffeine metabolism
D YIM_19285 uox2; Uricase K00365 uaZ; urate oxidase [EC:1.7.3.3]
D YIM_11225 uox1; Uricase K00365 uaZ; urate oxidase [EC:1.7.3.3]
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:amyy00311]
D YIM_39185 srfAA; Surfactin synthase subunit 1 K12743 PCBAB; N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase [EC:6.3.2.26]
D YIM_39180 cefE1; Deacetoxycephalosporin C synthase K04126 PCBC; isopenicillin-N synthase [EC:1.21.3.1]
D YIM_39195 cefD; Isopenicillin N epimerase K04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17]
D YIM_39200 cefE2; Deacetoxycephalosporin C synthase K12744 cefE; deacetoxycephalosporin-C synthase [EC:1.14.20.1]
D YIM_39165 cefF; Deacetoxycephalosporin C hydroxylase K12745 cefF; deacetoxycephalosporin-C hydroxylase [EC:1.14.11.26]
D YIM_43875 cah2; Cephalosporin-C deacetylase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
D YIM_39160 novN2; Decarbamoylnovobiocin carbamoyltransferase K04128 cmcH; hydroxymethyl cephem carbamoyltransferase [EC:2.1.3.7]
D YIM_39175 Rhamnosyl O-methyltransferase precursor K18062 cmcI; cephamycin C biosynthesis protein
D YIM_16765 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase K19200 IAL; isopenicillin-N N-acyltransferase like protein
D YIM_29920 acyII; Penicillin acylase 2 precursor K01434 pac; penicillin G amidase [EC:3.5.1.11]
D YIM_40010 blaB2; Beta-lactamase regulatory protein BlaB K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D YIM_39155 penPC; Beta-lactamase 1 precursor K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D YIM_08600 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:amyy00332]
D YIM_38585 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D YIM_08980 proA1; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:amyy00261]
D YIM_21185 Lactate 2-monooxygenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D YIM_40210 MbtH-like protein K05375 mbtH; MbtH protein
D YIM_18515 MbtH-like protein K05375 mbtH; MbtH protein
D YIM_18520 MbtH-like protein K05375 mbtH; MbtH protein
D YIM_17240 MbtH-like protein K05375 mbtH; MbtH protein
D YIM_22885 MbtH-like protein K05375 mbtH; MbtH protein
D YIM_32320 MbtH-like protein K05375 mbtH; MbtH protein
D YIM_25775 MbtH-like protein K05375 mbtH; MbtH protein
D YIM_25315 MbtH-like protein K05375 mbtH; MbtH protein
D YIM_40615 cysNC3; Bifunctional enzyme CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D YIM_29515 cysNC1; Bifunctional enzyme CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D YIM_38355 cysNC2; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D YIM_40610 cysD4; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YIM_38350 cysD3; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YIM_29510 cysD1; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YIM_36860 cysD2; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YIM_02055 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D YIM_02060 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D YIM_07080 dapA1; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YIM_26295 dapA3; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YIM_20290 dapA2; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YIM_29930 putative 5-dehydro-4-deoxyglucarate dehydratase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YIM_30700 dapA4; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YIM_33005 dapA5; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YIM_35825 dapA6; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YIM_35900 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:amyy00521]
D YIM_14120 glkA2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D YIM_03080 glkA1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D YIM_44330 Myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D YIM_47850 ino1; Inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D YIM_45150 impA2; Inositol-1-monophosphatase ImpA K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D YIM_08795 impA1; Inositol-1-monophosphatase ImpA K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D YIM_31240 suhB; Inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D YIM_10550 idhA2; Inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D YIM_09760 ligC1; 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D YIM_17520 iolG; Inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D YIM_44825 rmlA3; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YIM_11655 rmlA1; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YIM_22730 rmlA2; Glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YIM_42635 strE; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D YIM_33480 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D YIM_21550 rmlC2; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D YIM_42630 strL; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D YIM_14120 glkA2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D YIM_03080 glkA1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:amyy00525]
D YIM_44825 rmlA3; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YIM_11655 rmlA1; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YIM_22730 rmlA2; Glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YIM_42635 strE; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D YIM_33480 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:amyy00401]
D YIM_01720 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D YIM_25250 aspC1; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D YIM_44565 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D YIM_01470 pat1; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_15150 pat2; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_12590 hisC1; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_29495 hisC2; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_35495 cobD2; Threonine-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
D YIM_08365 rmlC1; dTDP-4-dehydrorhamnose 3,5-epimerase K16438 evaD; 5-epimerase [EC:5.1.3.-]
D YIM_05675 novW; dTDP-4-dehydrorhamnose 3-epimerase K16438 evaD; 5-epimerase [EC:5.1.3.-]
C 00405 Phenazine biosynthesis [PATH:amyy00405]
D YIM_25140 Phenazine biosynthesis-like protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D YIM_22825 xlnD1; 3-hydroxybenzoate 6-hydroxylase 1 K20940 phzS; 5-methylphenazine-1-carboxylate 1-monooxygenase [EC:1.14.13.218]
D YIM_12805 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D YIM_11985 fabD2; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YIM_46100 fabG40; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_47295 fabG42; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_01125 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_18490 novJ1; Short-chain reductase protein NovJ K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_17230 fabG10; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_21810 fabG15; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_23145 tsaC2; 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_24145 fabG17; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_25690 fabG19; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_26815 fabG21; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_19560 fabG13; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_33180 fabG30; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_48000 fabG43; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_48085 bdcA4; Cyclic-di-GMP-binding biofilm dispersal mediator protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_30605 fabG29; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_34675 fabG31; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_38765 ycdF2; Glucose 1-dehydrogenase 2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_43800 bdcA3; Cyclic-di-GMP-binding biofilm dispersal mediator protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_21250 xecD1; 2-(R)-hydroxypropyl-CoM dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:amyy00998]
D YIM_43965 Phosphopantetheine attachment site K02078 acpP; acyl carrier protein
D YIM_32330 Phosphopantetheine attachment site K02078 acpP; acyl carrier protein
D YIM_11975 acpM1; Meromycolate extension acyl carrier protein K02078 acpP; acyl carrier protein
D YIM_25705 acpP2; Acyl carrier protein K02078 acpP; acyl carrier protein
D YIM_26830 acpM2; Meromycolate extension acyl carrier protein K02078 acpP; acyl carrier protein
D YIM_26890 acpP3; Acyl carrier protein K02078 acpP; acyl carrier protein
D YIM_31970 acyl carrier protein K02078 acpP; acyl carrier protein
D YIM_32325 sbnA4; putative siderophore biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
D YIM_25710 sbnA3; putative siderophore biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
D YIM_22875 sbnA2; putative siderophore biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
D YIM_29505 pphA; Phosphonopyruvate hydrolase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9]
D YIM_29485 hypothetical protein K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82]
C 00999 Biosynthesis of various plant secondary metabolites [PATH:amyy00999]
D YIM_17875 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D YIM_42920 bglX3; Periplasmic beta-glucosidase precursor K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YIM_05495 bglB1; Thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YIM_22095 bglB4; Thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YIM_36940 bglB5; Thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YIM_37180 bglB6; Thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YIM_41945 bglA8; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_00390 bglA1; Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_19805 bglB2; Beta-glucosidase B K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_19860 bglB3; Beta-glucosidase B K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_32605 bglA4; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_32815 bglA5; Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_26205 bglA2; Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D YIM_36960 bglA6; Beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites [PATH:amyy00997]
D YIM_23650 Pyoverdine/dityrosine biosynthesis protein K22952 pvcA; L-tyrosine isonitrile synthase [EC:4.1.99.24]
D YIM_32325 sbnA4; putative siderophore biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
D YIM_25710 sbnA3; putative siderophore biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
D YIM_22875 sbnA2; putative siderophore biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:amyy00362]
D YIM_15280 clcA; Chlorocatechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D YIM_10755 tfdD; Chloromuconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D YIM_15285 catB1; Muconate cycloisomerase 1 K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D YIM_15290 catC; Muconolactone Delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4]
D YIM_10395 catD3; 3-oxoadipate enol-lactonase 2 K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D YIM_32625 catD8; 3-oxoadipate enol-lactonase 2 K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D YIM_28625 catD7; 3-oxoadipate enol-lactonase 2 K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D YIM_10125 pcaF; Beta-ketoadipyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YIM_31060 paaJ2; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YIM_27910 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D YIM_27900 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D YIM_27905 mhpF; Acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D YIM_23065 chqB; Hydroxyquinol 1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D YIM_23070 tfdF; Maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D YIM_10390 pcaG1; Protocatechuate 3,4-dioxygenase alpha chain K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D YIM_10385 pcaH; Protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D YIM_36235 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D YIM_10400 Carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D YIM_20930 Carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D YIM_32975 Carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D YIM_21235 proA3; 4-hydroxy-4-methyl-2-oxoglutarate aldolase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D YIM_24070 vdh1; Vitamin D(3) 25-hydroxylase K22553 CYP199A2; 4-methoxybenzoate monooxygenase (O-demethylating) [EC:1.14.99.15]
D YIM_22020 thcD3; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D YIM_36765 thcD6; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D YIM_10650 thcD1; Rhodocoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D YIM_25620 bedA; Benzene 1,2-dioxygenase system ferredoxin--NAD(+) reductase subunit K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D YIM_22035 Ferredoxin-6 K04755 fdx; ferredoxin, 2Fe-2S
D YIM_22065 thcC1; Rhodocoxin K04755 fdx; ferredoxin, 2Fe-2S
D YIM_36770 thcC2; Rhodocoxin K04755 fdx; ferredoxin, 2Fe-2S
D YIM_35120 pobA; p-hydroxybenzoate hydroxylase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D YIM_30030 fabG24; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D YIM_05920 fadJ1; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YIM_23455 fadB2; Fatty acid oxidation complex subunit alpha K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D YIM_16710 mmgC9; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D YIM_12710 mmgC5; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D YIM_22715 mmgC13; Acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D YIM_44980 putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_09170 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_06505 fadB1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D YIM_03030 mmgB; putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D YIM_23565 paaH; 3-hydroxyadipyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D YIM_29300 fadB3; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D YIM_46355 fadB4; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D YIM_47300 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_09040 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05010 fadA1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05915 fadA2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14515 fadA3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14530 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_21940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_20775 caiD2; Carnitinyl-CoA dehydratase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_33185 paaJ3; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_21145 boxB; Benzoyl-CoA oxygenase component B K15512 boxB; benzoyl-CoA 2,3-epoxidase subunit B [EC:1.14.13.208]
D YIM_21140 boxC; Benzoyl-CoA-dihydrodiol lyase K15513 boxC; benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44]
C 00627 Aminobenzoate degradation [PATH:amyy00627]
D YIM_36490 ethA; FAD-containing monooxygenase EthA K10215 ethA; monooxygenase [EC:1.14.13.-]
D YIM_42135 aam3; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_45660 aam5; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_29650 atzE; Biuret hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_23160 nylA2; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_26070 amiE; Aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_28355 gatA3; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_17265 nylA1; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_14225 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D YIM_11110 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D YIM_19145 xylC1; Benzaldehyde dehydrogenase [NAD(+)] K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D YIM_22200 xylC2; Benzaldehyde dehydrogenase [NAD(+)] K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D YIM_23920 xylC3; Benzaldehyde dehydrogenase [NAD(+)] K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D YIM_40080 vioD; putative tryptophan hydroxylase VioD K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40]
D YIM_44980 putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_09170 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:amyy00364]
D YIM_15280 clcA; Chlorocatechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D YIM_01475 Dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D YIM_06920 Dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D YIM_22680 clcD; Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D YIM_10755 tfdD; Chloromuconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D YIM_15285 catB1; Muconate cycloisomerase 1 K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D YIM_23070 tfdF; Maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00625 Chloroalkane and chloroalkene degradation [PATH:amyy00625]
D YIM_00990 dhmA1; Haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D YIM_24780 dhaA2; Haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D YIM_29890 dhaA3; Haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D YIM_29540 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D YIM_23800 adh1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D YIM_43195 aldA4; Putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_06090 ald2; 3-succinoylsemialdehyde-pyridine dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21910 geoB1; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_21995 geoB2; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_23080 puuC1; Aldehyde dehydrogenase PuuC K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_30345 geoB3; Geranial dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D YIM_28310 Fluoroacetate dehalogenase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D YIM_13715 Fluoroacetate dehalogenase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D YIM_29195 Soluble epoxide hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D YIM_15225 Fluoroacetate dehalogenase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D YIM_37825 hdl_IVa2; (S)-2-haloacid dehalogenase 4A K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D YIM_22970 2-haloalkanoic acid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D YIM_25520 hadL; (S)-2-haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:amyy00361]
D YIM_00990 dhmA1; Haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D YIM_24780 dhaA2; Haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D YIM_29890 dhaA3; Haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D YIM_15280 clcA; Chlorocatechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D YIM_01475 Dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D YIM_06920 Dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D YIM_22680 clcD; Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D YIM_23070 tfdF; Maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D YIM_23065 chqB; Hydroxyquinol 1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D YIM_10755 tfdD; Chloromuconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D YIM_15285 catB1; Muconate cycloisomerase 1 K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D YIM_37825 hdl_IVa2; (S)-2-haloacid dehalogenase 4A K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D YIM_22970 2-haloalkanoic acid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D YIM_25520 hadL; (S)-2-haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D YIM_28310 Fluoroacetate dehalogenase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D YIM_13715 Fluoroacetate dehalogenase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D YIM_29195 Soluble epoxide hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D YIM_15225 Fluoroacetate dehalogenase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00623 Toluene degradation [PATH:amyy00623]
D YIM_21815 caiD3; Carnitinyl-CoA dehydratase K07546 bbsH; (E)-benzylidenesuccinyl-CoA hydratase [EC:4.2.1.180]
D YIM_15590 xylB1; Aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D YIM_19145 xylC1; Benzaldehyde dehydrogenase [NAD(+)] K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D YIM_22200 xylC2; Benzaldehyde dehydrogenase [NAD(+)] K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D YIM_23920 xylC3; Benzaldehyde dehydrogenase [NAD(+)] K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D YIM_15280 clcA; Chlorocatechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D YIM_10755 tfdD; Chloromuconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D YIM_15285 catB1; Muconate cycloisomerase 1 K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D YIM_01475 Dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D YIM_06920 Dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D YIM_22680 clcD; Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D YIM_23070 tfdF; Maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00622 Xylene degradation [PATH:amyy00622]
D YIM_15590 xylB1; Aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D YIM_19145 xylC1; Benzaldehyde dehydrogenase [NAD(+)] K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D YIM_22200 xylC2; Benzaldehyde dehydrogenase [NAD(+)] K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D YIM_23920 xylC3; Benzaldehyde dehydrogenase [NAD(+)] K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D YIM_27910 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D YIM_27900 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D YIM_27905 mhpF; Acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00633 Nitrotoluene degradation [PATH:amyy00633]
D YIM_04985 nemA; N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D YIM_10125 pcaF; Beta-ketoadipyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YIM_31060 paaJ2; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:amyy00643]
D YIM_00810 hmgA; Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D YIM_30275 Fumarylacetoacetate (FAA) hydrolase family protein K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D YIM_42135 aam3; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_45660 aam5; Acylamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_29650 atzE; Biuret hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_23160 nylA2; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_26070 amiE; Aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_28355 gatA3; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_17265 nylA1; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D YIM_14225 Nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D YIM_10370 catI1; 3-oxoadipate CoA-transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D YIM_23575 catI2; 3-oxoadipate CoA-transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D YIM_10375 catJ1; 3-oxoadipate CoA-transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D YIM_23570 catJ2; 3-oxoadipate CoA-transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
C 00791 Atrazine degradation [PATH:amyy00791]
D YIM_35735 atzF2; Allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D YIM_03850 ureC; Urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D YIM_03845 ureB1; Urease subunit beta 1 K01429 ureB; urease subunit beta [EC:3.5.1.5]
D YIM_03840 ureA; Urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:amyy00930]
D YIM_09545 gnl1; Gluconolactonase precursor K01053 gnl; gluconolactonase [EC:3.1.1.17]
D YIM_18340 mlhB1; Monoterpene epsilon-lactone hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D YIM_22075 mlhB2; Monoterpene epsilon-lactone hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D YIM_32910 mlhB3; Monoterpene epsilon-lactone hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D YIM_44980 putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_09170 putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D YIM_05920 fadJ1; Fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YIM_16760 Peptidase family S58 K19963 nylC; 6-aminohexanoate-oligomer endohydrolase [EC:3.5.1.117]
C 00363 Bisphenol degradation
D YIM_36800 hapE6; 4-hydroxyacetophenone monooxygenase K14520 hapE; 4-hydroxyacetophenone monooxygenase [EC:1.14.13.84]
C 00621 Dioxin degradation [PATH:amyy00621]
D YIM_27910 mhpD; 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D YIM_27900 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D YIM_27905 mhpF; Acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00626 Naphthalene degradation [PATH:amyy00626]
D YIM_29540 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D YIM_23800 adh1; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D YIM_10390 pcaG1; Protocatechuate 3,4-dioxygenase alpha chain K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D YIM_10385 pcaH; Protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:amyy00984]
D YIM_39985 choD1; Cholesterol oxidase K03333 choD; cholesterol oxidase [EC:1.1.3.6]
D YIM_43735 choD2; Cholesterol oxidase K03333 choD; cholesterol oxidase [EC:1.1.3.6]
D YIM_25865 choA1; Cholesterol oxidase precursor K03333 choD; cholesterol oxidase [EC:1.1.3.6]
D YIM_36455 choB; Cholesterol oxidase precursor K03333 choD; cholesterol oxidase [EC:1.1.3.6]
D YIM_14520 Steroid C26-monooxygenase K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29]
D YIM_14440 kstD1; 3-oxosteroid 1-dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
D YIM_07935 ksdD; 3-oxosteroid 1-dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
D YIM_36690 kstD2; 3-oxosteroid 1-dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
D YIM_14435 kshA1; 3-ketosteroid-9-alpha-monooxygenase oxygenase subunit K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30]
D YIM_36740 kshA2; 3-ketosteroid-9-alpha-monooxygenase oxygenase subunit K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30]
D YIM_14425 hmp1; 3-ketosteroid-9-alpha-hydroxylase reductase subunit K15983 kshB; 3-ketosteroid 9alpha-monooxygenase subunit B [EC:1.14.15.30]
D YIM_36730 hmp4; 3-ketosteroid-9-alpha-hydroxylase reductase subunit K15983 kshB; 3-ketosteroid 9alpha-monooxygenase subunit B [EC:1.14.15.30]
D YIM_40880 hsaA8; Flavin-dependent monooxygenase, oxygenase subunit HsaA K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12]
D YIM_14450 hsaA1; Flavin-dependent monooxygenase, oxygenase subunit HsaA K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12]
D YIM_23025 hsaA2; Flavin-dependent monooxygenase, oxygenase subunit HsaA K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12]
D YIM_36670 hsaA6; Flavin-dependent monooxygenase, oxygenase subunit HsaA K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12]
D YIM_14465 hsaB1; Flavin-dependent monooxygenase, reductase subunit HsaB K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-]
D YIM_14460 hsaC1; Iron-dependent extradiol dioxygenase K16049 hsaC; 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase [EC:1.13.11.25]
D YIM_36675 hsaC2; Iron-dependent extradiol dioxygenase K16049 hsaC; 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase [EC:1.13.11.25]
D YIM_14455 hsaD1; 4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10),2-diene-4-oate hydrolase K16050 hsaD; 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase [EC:3.7.1.17]
D YIM_33170 lcfB8; Long-chain-fatty-acid--CoA ligase K18687 fadD3; HIP---CoA ligase [EC:6.2.1.41]
D YIM_36650 ksi; Steroid Delta-isomerase K01822 E5.3.3.1; steroid Delta-isomerase [EC:5.3.3.1]
D YIM_38965 SnoaL-like domain protein K01822 E5.3.3.1; steroid Delta-isomerase [EC:5.3.3.1]
D YIM_14445 3-oxo-5-alpha-steroid 4-dehydrogenase K16051 tesI; 3-oxo-5alpha-steroid 4-dehydrogenase [EC:1.3.99.5]
D YIM_36750 urdA; Urocanate reductase precursor K16051 tesI; 3-oxo-5alpha-steroid 4-dehydrogenase [EC:1.3.99.5]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:amyy03020]
D YIM_44455 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D YIM_44450 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D YIM_44105 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D YIM_17865 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D YIM_03445 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:amyy03010]
D YIM_31995 hypothetical protein K02945 RP-S1; small subunit ribosomal protein S1
D YIM_11405 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D YIM_44230 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D YIM_44110 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D YIM_44175 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D YIM_47915 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D YIM_44280 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D YIM_44190 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D YIM_43995 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D YIM_44265 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D YIM_44115 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D YIM_44285 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D YIM_44125 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D YIM_44195 rpsZ; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D YIM_27845 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D YIM_35915 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D YIM_11330 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D YIM_44215 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D YIM_47925 rpsR2; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18
D YIM_27850 rpsR1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18
D YIM_44240 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D YIM_38470 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D YIM_44540 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D YIM_44245 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D YIM_44260 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D YIM_44255 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D YIM_44200 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D YIM_44185 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D YIM_44515 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D YIM_47930 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D YIM_44520 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D YIM_44545 rplK2; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D YIM_02545 rplK1; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D YIM_44000 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D YIM_44210 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D YIM_44165 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D YIM_44225 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D YIM_44100 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D YIM_44180 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D YIM_11350 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D YIM_31525 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D YIM_38600 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D YIM_44235 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D YIM_44250 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D YIM_44205 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D YIM_04710 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D YIM_38595 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D YIM_10250 rpmB1; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D YIM_27835 rpmB2; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D YIM_44220 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D YIM_44170 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D YIM_06305 rpmE1; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D YIM_27825 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D YIM_11030 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D YIM_27820 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D YIM_44605 rpmG2; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D YIM_27840 rpmG1; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D YIM_48290 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D YIM_31530 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D YIM_44130 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D YIM_33380 ykgO; 50S ribosomal protein L36 2 K02919 RP-L36; large subunit ribosomal protein L36
D YIM_10960 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YIM_12090 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YIM_31430 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YIM_06615 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YIM_10965 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YIM_12095 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YIM_31425 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YIM_06620 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YIM_12100 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YIM_31420 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YIM_06625 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YIM_10970 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:amyy00970]
D YIM_07005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YIM_00070 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YIM_04465 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YIM_37070 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YIM_39145 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YIM_06225 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YIM_04330 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YIM_01505 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YIM_37990 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D YIM_45770 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D YIM_15450 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D YIM_04740 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D YIM_09730 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D YIM_09735 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D YIM_45775 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D YIM_00645 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YIM_47090 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YIM_38905 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YIM_15445 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YIM_08925 tRNA-His K14226 tRNA-His; tRNA His
D YIM_00050 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D YIM_04915 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YIM_21610 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YIM_00210 tRNA-Ser K14228 tRNA-Leu; tRNA Leu
D YIM_32110 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YIM_08390 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YIM_08915 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YIM_45995 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YIM_06755 tRNA-Met K14230 tRNA-Met; tRNA Met
D YIM_06740 tRNA-Met K14230 tRNA-Met; tRNA Met
D YIM_37140 tRNA-Met K14230 tRNA-Met; tRNA Met
D YIM_44610 tRNA-Met K14230 tRNA-Met; tRNA Met
D YIM_45765 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D YIM_28785 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D YIM_38900 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D YIM_02130 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D YIM_01800 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YIM_01745 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YIM_01500 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YIM_01320 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YIM_44615 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YIM_02915 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YIM_02450 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YIM_44560 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D YIM_44800 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D YIM_15455 tRNA-Val K14237 tRNA-Val; tRNA Val
D YIM_12045 tRNA-Val K14237 tRNA-Val; tRNA Val
D YIM_15435 tRNA-Val K14237 tRNA-Val; tRNA Val
D YIM_09720 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YIM_09595 gatA1; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D YIM_06010 aam2; Acylamidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D YIM_00315 aam1; Acylamidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D YIM_38425 gatA4; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D YIM_09605 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D YIM_09590 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D YIM_17640 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D YIM_17575 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D YIM_08345 asnS; Asparagine--tRNA ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D YIM_38085 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D YIM_17315 thrS1; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D YIM_37460 thrS2; Threonine--tRNA ligase 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D YIM_00995 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D YIM_04655 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D YIM_40225 arnA; Bifunctional polymyxin resistance protein ArnA K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D YIM_17900 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D YIM_38745 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D YIM_48095 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D YIM_14000 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D YIM_41765 lysX2; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D YIM_02685 lysX1; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D YIM_38880 argS2; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YIM_06270 argS1; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YIM_11875 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D YIM_43155 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D YIM_28300 pheS1; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D YIM_31515 pheS2; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D YIM_31510 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D YIM_31435 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D YIM_43405 trpS2; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D YIM_05380 trpS1; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:amyy03060]
D YIM_44150 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D YIM_44555 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D YIM_18040 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D YIM_17445 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D YIM_17450 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D YIM_17440 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D YIM_43105 yidC1; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YIM_48285 yidC2; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YIM_05560 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YIM_06580 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YIM_11310 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D YIM_01935 ffs; Bacterial small signal recognition particle RNA K01983 ffs; SRP RNA
D YIM_11155 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D YIM_14110 arsA2; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D YIM_27235 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D YIM_42390 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D YIM_27230 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D YIM_02810 lepB1; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D YIM_11355 lepB2; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D YIM_37685 Peptidase S24-like protein K03100 lepB; signal peptidase I [EC:3.4.21.89]
D YIM_14040 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:amyy04122]
D YIM_09525 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YIM_46290 Putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D YIM_13780 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D YIM_09530 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D YIM_03560 moaA1; Cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D YIM_41675 cysO2; Sulfur carrier protein CysO K03636 moaD; sulfur-carrier protein
D YIM_02885 cysO1; Sulfur carrier protein CysO K03636 moaD; sulfur-carrier protein
D YIM_03555 ThiS family protein K03636 moaD; sulfur-carrier protein
D YIM_42190 moeZ; putative adenylyltransferase/sulfurtransferase MoeZ K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D YIM_03535 moaC2; Cyclic pyranopterin monophosphate synthase accessory protein 2 K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D YIM_03290 thiS; Sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D YIM_41670 cysM2; O-phosphoserine sulfhydrylase K21148 cysM; [CysO sulfur-carrier protein]-thiocarboxylate-dependent cysteine synthase [EC:2.5.1.113]
D YIM_41680 mec; CysO-cysteine peptidase K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6]
C 03050 Proteasome [PATH:amyy03050]
D YIM_27325 arc; Proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase
D YIM_27275 prcA2; Proteasome subunit alpha 2 K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D YIM_27280 prcB1; Proteasome subunit beta 1 precursor K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C 03018 RNA degradation [PATH:amyy03018]
D YIM_38605 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D YIM_04820 eno1; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YIM_33545 eno2; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YIM_35910 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D YIM_38540 recQ2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D YIM_35330 recQ1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D YIM_43225 hypothetical protein K03628 rho; transcription termination factor Rho
D YIM_06295 hypothetical protein K03628 rho; transcription termination factor Rho
D YIM_35820 Putative ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D YIM_46980 dnaK5; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D YIM_37270 groEL2; 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YIM_43805 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YIM_03405 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YIM_10175 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D YIM_48175 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:amyy03030]
D YIM_12370 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YIM_27090 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YIM_41435 dnaE3; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YIM_12125 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YIM_01940 dnaX1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YIM_02440 dnaX2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YIM_38480 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YIM_00015 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YIM_00785 bmrR1; Multidrug-efflux transporter 1 regulator K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YIM_47955 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D YIM_38010 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D YIM_39120 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D YIM_47920 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D YIM_36305 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D YIM_42000 pspA4; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D YIM_11360 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D YIM_32060 polA3; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YIM_09575 ligA1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YIM_21010 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:amyy03410]
D YIM_02215 pdg; Ultraviolet N-glycosylase/AP lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D YIM_10245 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D YIM_02755 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D YIM_31440 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D YIM_00660 fpg1; putative formamidopyrimidine-DNA glycosylase-like protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D YIM_11040 fpg2; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D YIM_35715 nei1; Endonuclease 8 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D YIM_39015 nei2; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D YIM_47790 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D YIM_08970 alkA2; DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D YIM_05305 alkA1; DNA-3-methyladenine glycosylase 2 K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D YIM_18435 adaA; Bifunctional transcriptional activator/DNA repair enzyme AdaA K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D YIM_42440 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D YIM_47140 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D YIM_04890 Uracil DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D YIM_14910 Uracil DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D YIM_43440 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D YIM_17945 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D YIM_47895 end; putative endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D YIM_32060 polA3; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YIM_09575 ligA1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YIM_21010 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:amyy03420]
D YIM_04770 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D YIM_31660 uvrA6; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D YIM_31895 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D YIM_17955 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D YIM_42095 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YIM_43640 uvrD2; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YIM_06670 uvrD1; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YIM_37090 yjcD2; Putative ATP-dependent DNA helicase YjcD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YIM_32060 polA3; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YIM_09575 ligA1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YIM_21010 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YIM_03445 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:amyy03430]
D YIM_42095 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YIM_43640 uvrD2; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YIM_06670 uvrD1; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YIM_37090 yjcD2; Putative ATP-dependent DNA helicase YjcD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YIM_05265 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D YIM_05255 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D YIM_39120 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D YIM_47920 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D YIM_41435 dnaE3; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YIM_12125 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YIM_00015 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YIM_00785 bmrR1; Multidrug-efflux transporter 1 regulator K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YIM_01940 dnaX1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YIM_38480 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YIM_02440 dnaX2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YIM_12370 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YIM_27090 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YIM_09575 ligA1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YIM_21010 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:amyy03440]
D YIM_39120 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D YIM_47920 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D YIM_00025 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D YIM_38145 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D YIM_01965 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D YIM_13090 DNA recombination protein RecA K03553 recA; recombination protein RecA
D YIM_32060 polA3; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YIM_17430 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D YIM_17435 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D YIM_17425 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D YIM_47250 Divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D YIM_10260 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D YIM_40455 recD5; ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D YIM_41435 dnaE3; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YIM_12125 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YIM_00015 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YIM_00785 bmrR1; Multidrug-efflux transporter 1 regulator K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YIM_01940 dnaX1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YIM_38480 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YIM_02440 dnaX2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YIM_12370 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YIM_27090 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YIM_17880 priA2; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:amyy03450]
D YIM_01440 ykoV1; putative DNA repair protein YkoV K10979 ku; DNA end-binding protein Ku
D YIM_11305 ykoV2; putative DNA repair protein YkoV K10979 ku; DNA end-binding protein Ku
D YIM_28210 ykoV3; putative DNA repair protein YkoV K10979 ku; DNA end-binding protein Ku
D YIM_41420 Putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D YIM_01445 ykoU1; putative ATP-dependent DNA ligase YkoU K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D YIM_14985 Putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D YIM_18555 Putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D YIM_31710 ykoU2; putative ATP-dependent DNA ligase YkoU K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:amyy03250]
D YIM_00125 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:amyy02010]
D YIM_08475 ssuA1; Putative aliphatic sulfonates-binding protein precursor K15553 ssuA; sulfonate transport system substrate-binding protein
D YIM_12315 NMT1/THI5 like protein K15553 ssuA; sulfonate transport system substrate-binding protein
D YIM_08485 ssuC1; Putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein
D YIM_12310 ssuC3; Putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein
D YIM_08480 ssuB1; Aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D YIM_12305 tauB; Taurine import ATP-binding protein TauB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D YIM_15005 modA; Molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein
D YIM_15000 modB; Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D YIM_14995 ugpC1; sn-glycerol-3-phosphate import ATP-binding protein UgpC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D YIM_23445 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D YIM_23440 potH; Putrescine transport system permease protein PotH K02011 afuB; iron(III) transport system permease protein
D YIM_23435 malK; Maltose/maltodextrin import ATP-binding protein MalK K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D YIM_05335 thiB; Thiamine-binding periplasmic protein precursor K02064 thiB; thiamine transport system substrate-binding protein
D YIM_05340 phnV; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02063 thiP; thiamine transport system permease protein
D YIM_05345 potA; Spermidine/putrescine import ATP-binding protein PotA K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D YIM_45520 opuBC; Choline-binding protein precursor K05845 opuC; osmoprotectant transport system substrate-binding protein
D YIM_00465 osmF; Putative osmoprotectant uptake system substrate-binding protein OsmF precursor K05845 opuC; osmoprotectant transport system substrate-binding protein
D YIM_05705 opuCC; Glycine betaine/carnitine/choline-binding protein OpuCC precursor K05845 opuC; osmoprotectant transport system substrate-binding protein
D YIM_45525 opuCD2; Glycine betaine/carnitine/choline transport system permease protein OpuCD K05846 opuBD; osmoprotectant transport system permease protein
D YIM_45530 opuBB; Choline transport system permease protein OpuBB K05846 opuBD; osmoprotectant transport system permease protein
D YIM_00460 opuCB2; Glycine betaine/carnitine/choline transport system permease protein OpuCB K05846 opuBD; osmoprotectant transport system permease protein
D YIM_05695 opuCD1; Glycine betaine/carnitine/choline transport system permease protein OpuCD K05846 opuBD; osmoprotectant transport system permease protein
D YIM_05700 opuCB3; Glycine betaine/carnitine/choline transport system permease protein OpuCB K05846 opuBD; osmoprotectant transport system permease protein
D YIM_00450 opuCB1; Carnitine transport permease protein OpuCB K05846 opuBD; osmoprotectant transport system permease protein
D YIM_05690 opuCA2; Carnitine transport ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D YIM_00455 opuCA1; Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D YIM_42330 sugC2; Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YIM_43895 sugC3; Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YIM_21415 ugpC3; sn-glycerol-3-phosphate import ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YIM_24205 sugC1; Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YIM_28045 ugpC4; sn-glycerol-3-phosphate import ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YIM_19800 ugpC2; sn-glycerol-3-phosphate import ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YIM_21285 msmE1; Multiple sugar-binding protein precursor K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D YIM_19715 Bacterial extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D YIM_20890 Bacterial extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D YIM_24190 Bacterial extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D YIM_21290 lacF5; Lactose transport system permease protein LacF K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D YIM_19720 lacF1; Lactose transport system permease protein LacF K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D YIM_24195 lacF8; Lactose transport system permease protein LacF K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D YIM_20885 lacF4; Lactose transport system permease protein LacF K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D YIM_21295 araQ3; L-arabinose transport system permease protein AraQ K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D YIM_19725 sugB1; Trehalose transport system permease protein SugB K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D YIM_20880 araQ2; L-arabinose transport system permease protein AraQ K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D YIM_24200 sugB3; Trehalose transport system permease protein SugB K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D YIM_28670 putative sugar-binding periplasmic protein precursor K10232 aglE; alpha-glucoside transport system substrate-binding protein
D YIM_19670 lipO; Lipoprotein LipO precursor K17318 lplA; putative aldouronate transport system substrate-binding protein
D YIM_19660 yteP; putative multiple-sugar transport system permease YteP K17319 lplB; putative aldouronate transport system permease protein
D YIM_19665 araQ1; L-arabinose transport system permease protein AraQ K17320 lplC; putative aldouronate transport system permease protein
D YIM_42345 lpqY; Trehalose-binding lipoprotein LpqY precursor K10236 thuE; trehalose/maltose transport system substrate-binding protein
D YIM_42340 sugA2; Trehalose transport system permease protein SugA K10237 thuF; trehalose/maltose transport system permease protein
D YIM_42335 sugB5; Trehalose transport system permease protein SugB K10238 thuG; trehalose/maltose transport system permease protein
D YIM_41930 araN2; putative arabinose-binding protein precursor K10240 cebE; cellobiose transport system substrate-binding protein
D YIM_19820 araN1; putative arabinose-binding protein precursor K10240 cebE; cellobiose transport system substrate-binding protein
D YIM_41935 lacF11; Lactose transport system permease protein LacF K10241 cebF; cellobiose transport system permease protein
D YIM_19815 lacF2; Lactose transport system permease protein LacF K10241 cebF; cellobiose transport system permease protein
D YIM_41940 lacG3; Lactose transport system permease protein LacG K10242 cebG; cellobiose transport system permease protein
D YIM_19810 lacG1; Lactose transport system permease protein LacG K10242 cebG; cellobiose transport system permease protein
D YIM_31590 msmE2; Multiple sugar-binding protein precursor K17329 dasA; N,N'-diacetylchitobiose transport system substrate-binding protein
D YIM_31595 ycjO3; Inner membrane ABC transporter permease protein YcjO K17330 dasB; N,N'-diacetylchitobiose transport system permease protein
D YIM_31600 ycjP4; Inner membrane ABC transporter permease protein YcjP K17331 dasC; N,N'-diacetylchitobiose transport system permease protein
D YIM_44470 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_44475 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_44485 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_44490 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_13840 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_13845 mlaD; putative phospholipid ABC transporter-binding protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_13855 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_13860 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_10920 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_10925 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_10935 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_10940 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_13835 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_13850 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_44480 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_10930 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_10945 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_44495 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_44500 mlaE5; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YIM_44505 mlaE6; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YIM_13825 mlaE3; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YIM_13830 mlaE4; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YIM_10950 mlaE1; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YIM_10955 mlaE2; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YIM_44510 putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D YIM_43285 tmpC2; Membrane lipoprotein TmpC precursor K07335 bmpA; basic membrane protein A and related proteins
D YIM_42945 tmpC1; Membrane lipoprotein TmpC precursor K07335 bmpA; basic membrane protein A and related proteins
D YIM_43275 Branched-chain amino acid transport system / permease component K23535 nupB; general nucleoside transport system permease protein
D YIM_42955 Branched-chain amino acid transport system / permease component K23535 nupB; general nucleoside transport system permease protein
D YIM_42960 Branched-chain amino acid transport system / permease component K23536 nupC; general nucleoside transport system permease protein
D YIM_43270 Branched-chain amino acid transport system / permease component K23536 nupC; general nucleoside transport system permease protein
D YIM_43280 rbsA8; Ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein
D YIM_42950 rbsA7; Ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein
D YIM_31830 rbsB3; D-ribose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D YIM_39870 rbsB5; D-ribose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D YIM_44345 ytfQ3; ABC transporter periplasmic-binding protein YtfQ precursor K10439 rbsB; ribose transport system substrate-binding protein
D YIM_09085 rbsB1; D-ribose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D YIM_38705 rbsB4; D-ribose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D YIM_44350 rbsC9; Ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D YIM_09090 rbsC2; Ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D YIM_31835 rbsC5; Ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D YIM_38710 rbsC6; Ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D YIM_38715 rbsC7; Ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D YIM_38720 rbsA5; Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YIM_31840 rbsA4; Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YIM_44355 araG2; Arabinose import ATP-binding protein AraG K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YIM_06200 ytfQ1; ABC transporter periplasmic-binding protein YtfQ precursor K23508 ytfQ; galactofuranose transport system substrate-binding protein
D YIM_26560 ytfQ2; ABC transporter periplasmic-binding protein YtfQ precursor K23508 ytfQ; galactofuranose transport system substrate-binding protein
D YIM_06210 ytfT1; Inner membrane ABC transporter permease protein YtfT K23509 ytfT; galactofuranose transport system permease protein
D YIM_06215 yjfF1; Inner membrane ABC transporter permease protein YjfF K23509 ytfT; galactofuranose transport system permease protein
D YIM_26545 yjfF2; Inner membrane ABC transporter permease protein YjfF K23509 ytfT; galactofuranose transport system permease protein
D YIM_26550 ytfT2; Inner membrane ABC transporter permease protein YtfT K23509 ytfT; galactofuranose transport system permease protein
D YIM_06205 rbsA2; Ribose import ATP-binding protein RbsA K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D YIM_26555 rbsA3; Ribose import ATP-binding protein RbsA K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D YIM_14670 xylF2; D-xylose-binding periplasmic protein precursor K10543 xylF; D-xylose transport system substrate-binding protein
D YIM_14680 xylH; Xylose transport system permease protein XylH K10544 xylH; D-xylose transport system permease protein
D YIM_14675 mglA2; Galactose/methyl galactoside import ATP-binding protein MglA K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D YIM_46890 rbsB6; D-ribose-binding periplasmic protein precursor K10552 frcB; fructose transport system substrate-binding protein
D YIM_46885 rbsC10; Ribose transport system permease protein RbsC K10553 frcC; fructose transport system permease protein
D YIM_46880 rbsA9; Ribose import ATP-binding protein RbsA K10554 frcA; fructose transport system ATP-binding protein
D YIM_06180 lsrB1; Autoinducer 2-binding protein LsrB precursor K10559 rhaS; rhamnose transport system substrate-binding protein
D YIM_06170 rbsC1; Ribose transport system permease protein RbsC K10560 rhaP; rhamnose transport system permease protein
D YIM_06175 lsrD; Autoinducer 2 import system permease protein LsrD K10561 rhaQ; rhamnose transport system permease protein
D YIM_06165 rbsA1; Ribose import ATP-binding protein RbsA K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D YIM_40890 ugpB; sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D YIM_46260 pstS2; Phosphate-binding protein PstS 3 precursor K02040 pstS; phosphate transport system substrate-binding protein
D YIM_05200 pstS1; Phosphate-binding protein PstS 1 precursor K02040 pstS; phosphate transport system substrate-binding protein
D YIM_46255 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D YIM_46250 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D YIM_46245 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D YIM_16665 phnD; Phosphate-import protein PhnD precursor K02044 phnD; phosphonate transport system substrate-binding protein
D YIM_16675 phnE; Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D YIM_16670 artM1; Arginine transport ATP-binding protein ArtM K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D YIM_38020 glnH6; ABC transporter glutamine-binding protein GlnH precursor K10005 gluB; glutamate transport system substrate-binding protein
D YIM_38025 glnH7; ABC transporter glutamine-binding protein GlnH precursor K10005 gluB; glutamate transport system substrate-binding protein
D YIM_13145 glnH3; ABC transporter glutamine-binding protein GlnH precursor K10005 gluB; glutamate transport system substrate-binding protein
D YIM_06975 glnH2; ABC transporter glutamine-binding protein GlnH precursor K10005 gluB; glutamate transport system substrate-binding protein
D YIM_17260 glnH4; ABC transporter glutamine-binding protein GlnH precursor K10005 gluB; glutamate transport system substrate-binding protein
D YIM_48190 glnH11; ABC transporter glutamine-binding protein GlnH precursor K10005 gluB; glutamate transport system substrate-binding protein
D YIM_03485 glnH1; ABC transporter glutamine-binding protein GlnH precursor K10005 gluB; glutamate transport system substrate-binding protein
D YIM_13140 glnM1; putative glutamine ABC transporter permease protein GlnM K10006 gluC; glutamate transport system permease protein
D YIM_48195 glnM2; putative glutamine ABC transporter permease protein GlnM K10006 gluC; glutamate transport system permease protein
D YIM_03480 yecS2; Inner membrane amino-acid ABC transporter permease protein YecS K10006 gluC; glutamate transport system permease protein
D YIM_13135 glnP1; putative glutamine ABC transporter permease protein GlnP K10007 gluD; glutamate transport system permease protein
D YIM_48200 glnP2; putative glutamine ABC transporter permease protein GlnP K10007 gluD; glutamate transport system permease protein
D YIM_03475 yecS1; Inner membrane amino-acid ABC transporter permease protein YecS K10007 gluD; glutamate transport system permease protein
D YIM_13150 glnQ1; Glutamine transport ATP-binding protein GlnQ K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D YIM_30640 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YIM_32100 braC; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YIM_34920 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YIM_28505 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YIM_30645 Branched-chain amino acid transport system / permease component K01997 livH; branched-chain amino acid transport system permease protein
D YIM_28495 livH2; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D YIM_32095 livH4; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D YIM_34915 livH6; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D YIM_30650 lsrA; Autoinducer 2 import ATP-binding protein LsrA K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YIM_28500 livH3; High-affinity branched-chain amino acid transport system permease protein LivH K01998 livM; branched-chain amino acid transport system permease protein
D YIM_34910 livH5; High-affinity branched-chain amino acid transport system permease protein LivH K01998 livM; branched-chain amino acid transport system permease protein
D YIM_28485 opuCA3; Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YIM_32085 ybhF4; putative ABC transporter ATP-binding protein YbhF K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YIM_34905 lptB2; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YIM_30655 livF3; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YIM_23165 livF1; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YIM_28490 livF2; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YIM_32080 livF4; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YIM_34900 livF5; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YIM_04675 metN; Methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D YIM_23175 amiC1; Aliphatic amidase expression-regulating protein K11959 urtA; urea transport system substrate-binding protein
D YIM_26080 amiC2; Aliphatic amidase expression-regulating protein K11959 urtA; urea transport system substrate-binding protein
D YIM_23180 livH1; High-affinity branched-chain amino acid transport system permease protein LivH K11960 urtB; urea transport system permease protein
D YIM_23170 lptB1; Lipopolysaccharide export system ATP-binding protein LptB K11961 urtC; urea transport system permease protein
D YIM_35780 ygiS; Putative binding protein YgiS precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D YIM_04850 oppA; Oligopeptide-binding protein OppA precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D YIM_04855 dppB2; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein
D YIM_04860 gsiD3; Glutathione transport system permease protein GsiD K15582 oppC; oligopeptide transport system permease protein
D YIM_04865 oppD3; Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D YIM_04870 oppF3; Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D YIM_05405 appA1; Oligopeptide-binding protein AppA precursor K13889 gsiB; glutathione transport system substrate-binding protein
D YIM_05410 appA2; Oligopeptide-binding protein AppA precursor K13889 gsiB; glutathione transport system substrate-binding protein
D YIM_05415 dppB3; Dipeptide transport system permease protein DppB K13890 gsiC; glutathione transport system permease protein
D YIM_05420 oppC; Oligopeptide transport system permease protein OppC K13891 gsiD; glutathione transport system permease protein
D YIM_44535 yfmC3; Fe(3+)-citrate-binding protein YfmC precursor K25287 desE; iron-desferrioxamine transport system substrate-binding protein
D YIM_40205 yhfQ; Putative ABC transporter substrate-binding lipoprotein YhfQ precursor K25286 fagD; iron-siderophore transport system substrate-binding protein
D YIM_33385 yfiY2; putative siderophore-binding lipoprotein YfiY precursor K25286 fagD; iron-siderophore transport system substrate-binding protein
D YIM_26020 yfmC2; Fe(3+)-citrate-binding protein YfmC precursor K25286 fagD; iron-siderophore transport system substrate-binding protein
D YIM_26015 fepD1; Ferric enterobactin transport system permease protein FepD K23186 fepD; iron-siderophore transport system permease protein
D YIM_33390 yfiZ2; putative siderophore transport system permease protein YfiZ precursor K23186 fepD; iron-siderophore transport system permease protein
D YIM_40190 fepD2; Ferric enterobactin transport system permease protein FepD K23186 fepD; iron-siderophore transport system permease protein
D YIM_26010 fepG1; Ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein
D YIM_33395 yfhA; putative siderophore transport system permease protein YfhA K23187 fepG; iron-siderophore transport system permease protein
D YIM_40185 fepG2; Ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein
D YIM_26005 yusV5; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D YIM_10635 yusV1; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D YIM_33400 yusV6; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D YIM_17165 fhuD; Iron(3+)-hydroxamate-binding protein FhuD precursor K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D YIM_17170 fhuB; Iron(3+)-hydroxamate import system permease protein FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D YIM_17160 yusV4; putative siderophore transport system ATP-binding protein YusV K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D YIM_41715 bioY2; Biotin transporter BioY2 K03523 bioY; biotin transport system substrate-specific component
D YIM_46370 Cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D YIM_01280 tagG; Teichoic acid translocation permease protein TagG K09690 wzm; homopolymeric O-antigen transport system permease protein
D YIM_01275 tagH; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D YIM_38615 ABC-2 type transporter K09694 nodJ; lipooligosaccharide transport system permease protein
D YIM_38620 ABC-2 type transporter K09694 nodJ; lipooligosaccharide transport system permease protein
D YIM_38625 drrA20; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D YIM_02715 drrB1; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K18233 oleC5; oleandomycin transport system permease protein
D YIM_32855 drrB8; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K18233 oleC5; oleandomycin transport system permease protein
D YIM_02720 drrA2; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K18232 oleC4; oleandomycin transport system ATP-binding protein
D YIM_32860 drrA13; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K18232 oleC4; oleandomycin transport system ATP-binding protein
D YIM_06775 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D YIM_06770 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D YIM_34650 irtA; Iron import ATP-binding/permease protein IrtA K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D YIM_34655 irtB; Iron import ATP-binding/permease protein IrtB K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D YIM_20135 putative ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D YIM_39610 Putative multidrug export ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D YIM_20130 putative ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D YIM_39615 putative ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D YIM_42480 putative ABC transporter ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D YIM_42475 cydD2; ATP-binding/permease protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D YIM_00850 cydD1; ATP-binding/permease protein CydD K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
D YIM_16645 yjjK; putative ABC transporter ATP-binding protein YjjK K18230 tylC; macrolide transport system ATP-binding/permease protein
D YIM_27455 putative ABC transporter ATP-binding protein K18230 tylC; macrolide transport system ATP-binding/permease protein
D YIM_27460 putative ABC transporter ATP-binding protein K18230 tylC; macrolide transport system ATP-binding/permease protein
D YIM_31265 yheS2; putative ABC transporter ATP-binding protein YheS K18230 tylC; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:amyy02060]
D YIM_48055 ptsI3; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D YIM_10445 ptsI1; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D YIM_33035 ptsI2; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D YIM_04185 ptsH1; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D YIM_17715 ptsH2; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D YIM_33045 ptsH3; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D YIM_17735 crr; Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YIM_17720 ptsG; PTS system glucose-specific EIICBA component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D YIM_10435 fruB; Multiphosphoryl transfer protein K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D YIM_10425 mtlA1; PTS system mannitol-specific EIICBA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D YIM_33060 PTS system glucitol/sorbitol-specific transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D YIM_33055 srlE; Glucitol/sorbitol-specific phosphotransferase enzyme IIB component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D YIM_33050 srlA; Glucitol/sorbitol permease IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D YIM_18605 pfkB2; 6-phosphofructokinase isozyme 2 K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D YIM_10420 pfkB1; 6-phosphofructokinase isozyme 2 K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:amyy03070]
D YIM_17445 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D YIM_17450 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D YIM_44555 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D YIM_18040 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D YIM_44150 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D YIM_17440 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D YIM_43105 yidC1; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YIM_48285 yidC2; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YIM_05560 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YIM_06580 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YIM_11155 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D YIM_11310 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D YIM_27235 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D YIM_42390 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D YIM_27230 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D YIM_28925 TraM recognition site of TraD and TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:amyy02020]
D YIM_40240 phoD4; Alkaline phosphatase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D YIM_43815 phoD5; Alkaline phosphatase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D YIM_01930 phoD1; Alkaline phosphatase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D YIM_16800 phoD2; Alkaline phosphatase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D YIM_38655 phoD3; Alkaline phosphatase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D YIM_45425 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D YIM_45420 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D YIM_29965 regX1; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D YIM_46260 pstS2; Phosphate-binding protein PstS 3 precursor K02040 pstS; phosphate transport system substrate-binding protein
D YIM_05200 pstS1; Phosphate-binding protein PstS 1 precursor K02040 pstS; phosphate transport system substrate-binding protein
D YIM_42395 degP2; Periplasmic serine endoprotease DegP precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D YIM_11395 sigD3; RNA polymerase sigma-D factor K02405 fliA; RNA polymerase sigma factor FliA
D YIM_11095 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D YIM_11100 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D YIM_11080 kdpA; Potassium-transporting ATPase A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D YIM_11085 kdpB; Potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D YIM_11090 kdpC; Potassium-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D YIM_46400 Tripartite tricarboxylate transporter TctA family protein K07793 tctA; putative tricarboxylic transport membrane protein
D YIM_26215 Tripartite tricarboxylate transporter TctA family protein K07793 tctA; putative tricarboxylic transport membrane protein
D YIM_46405 Tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D YIM_26220 Tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D YIM_46410 Tripartite tricarboxylate transporter family receptor K07795 tctC; putative tricarboxylic transport membrane protein
D YIM_26225 Tripartite tricarboxylate transporter family receptor K07795 tctC; putative tricarboxylic transport membrane protein
D YIM_18125 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D YIM_04350 mprB1; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D YIM_04345 mprA1; Response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA
D YIM_04365 degP1; Periplasmic serine endoprotease DegP precursor K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D YIM_08950 htrA; Putative serine protease HtrA K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D YIM_05540 mtrB2; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D YIM_01810 mtrB1; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D YIM_34245 mtrB3; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D YIM_05535 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D YIM_00005 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D YIM_36590 mprF; Phosphatidylglycerol lysyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D YIM_36555 czcS; Sensor protein CzcS precursor K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D YIM_20800 mprA2; Response regulator MprA K18352 vanRAc; two-component system, OmpR family, response regulator VanR
D YIM_36560 cusR; Transcriptional regulatory protein CusR K18352 vanRAc; two-component system, OmpR family, response regulator VanR
D YIM_36535 vanB; Vancomycin B-type resistance protein VanB K15739 vanB; D-alanine---(R)-lactate ligase [EC:6.1.2.1]
D YIM_36530 vanH; D-specific alpha-keto acid dehydrogenase K18347 vanH; D-specific alpha-keto acid dehydrogenase [EC:1.1.1.-]
D YIM_44415 vanX2; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D YIM_33815 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D YIM_36540 vanX1; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D YIM_36565 vanYB1; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D YIM_39210 vanYB2; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D YIM_00340 mcl1; (3S)-malyl-CoA thioesterase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D YIM_34930 mcl3; (3S)-malyl-CoA thioesterase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D YIM_37550 mcl4; Malyl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D YIM_05680 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D YIM_03530 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D YIM_21485 algD; GDP-mannose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D YIM_37200 narL; putative transcriptional regulatory protein NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D YIM_22320 narG; Nitrate reductase alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D YIM_22325 narY; Respiratory nitrate reductase 2 beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D YIM_22335 narX3; Nitrate reductase-like protein NarX K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D YIM_22330 narX2; Nitrate reductase-like protein NarX K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D YIM_26725 nreB5; Oxygen sensor histidine kinase NreB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D YIM_12570 nreC4; Oxygen regulatory protein NreC K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D YIM_04280 evgA1; Positive transcription regulator EvgA K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D YIM_38070 desK19; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D YIM_44425 desK21; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D YIM_01645 desK2; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D YIM_21030 desK12; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D YIM_38065 nreC8; Oxygen regulatory protein NreC K07693 desR; two-component system, NarL family, response regulator DesR
D YIM_41040 vraR14; Response regulator protein VraR K07693 desR; two-component system, NarL family, response regulator DesR
D YIM_44420 degU15; Transcriptional regulatory protein DegU K07693 desR; two-component system, NarL family, response regulator DesR
D YIM_01650 vraR1; Response regulator protein VraR K07693 desR; two-component system, NarL family, response regulator DesR
D YIM_21025 nreC5; Oxygen regulatory protein NreC K07693 desR; two-component system, NarL family, response regulator DesR
D YIM_01830 devS2; Redox sensor histidine kinase response regulator DevS K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D YIM_23835 dosT; Hypoxia sensor histidine kinase response regulator DosT K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D YIM_09455 devS3; Redox sensor histidine kinase response regulator DevS K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D YIM_00855 devS1; Redox sensor histidine kinase response regulator DevS K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D YIM_09450 devR3; Transcriptional regulatory protein DevR (DosR) K07695 devR; two-component system, NarL family, response regulator DevR
D YIM_23825 devR6; Transcriptional regulatory protein DevR (DosR) K07695 devR; two-component system, NarL family, response regulator DevR
D YIM_01835 devR2; Transcriptional regulatory protein DevR (DosR) K07695 devR; two-component system, NarL family, response regulator DevR
D YIM_22275 devR5; Transcriptional regulatory protein DevR (DosR) K07695 devR; two-component system, NarL family, response regulator DevR
D YIM_00865 devR1; Transcriptional regulatory protein DevR (DosR) K07695 devR; two-component system, NarL family, response regulator DevR
D YIM_02360 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D YIM_07520 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D YIM_02365 Bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B
D YIM_07525 Bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B
D YIM_07530 hypothetical protein K12511 tadC; tight adherence protein C
D YIM_11295 glnD; Bifunctional uridylyltransferase/uridylyl-removing enzyme K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D YIM_11290 glnB; Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D YIM_10570 glnA3; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_06610 glnA1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_06655 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_30760 puuA; Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_30935 glnA4; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_47300 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_09040 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05010 fadA1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05915 fadA2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14515 fadA3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14530 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_21940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_20775 caiD2; Carnitinyl-CoA dehydratase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_33185 paaJ3; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_11180 dctA2; Aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D YIM_04040 dctA1; Aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D YIM_31645 dctA3; Aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D YIM_41535 cheR; Chemotaxis protein methyltransferase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D YIM_41525 cheB3; Chemotaxis response regulator protein-glutamate methylesterase of group 3 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D YIM_23120 fixL; Sensor protein FixL K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D YIM_23095 fixJ; Transcriptional regulatory protein FixJ K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D YIM_02205 crp2; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D YIM_01340 crp1; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D YIM_44335 yliI7; Soluble aldose sugar dehydrogenase YliI precursor K08738 CYC; cytochrome c
D YIM_10790 gdhB1; Quinoprotein glucose dehydrogenase B precursor K08738 CYC; cytochrome c
D YIM_23520 xlnA8; Endo-1,4-beta-xylanase A precursor K08738 CYC; cytochrome c
D YIM_42465 cydA2; Cytochrome bd ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D YIM_00840 cydA1; Cytochrome bd ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D YIM_42470 cydB2; Cytochrome bd-I ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D YIM_00845 cydB1; Cytochrome bd-I ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D YIM_41920 ptpA8; putative low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D YIM_42500 celI; Endoglucanase 1 precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D YIM_41295 celA2; Endoglucanase 1 precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D YIM_27310 celE1; Endoglucanase E-5 precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D YIM_32705 celA1; Endoglucanase CelA precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D YIM_19780 celD; Endoglucanase E-4 precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D YIM_19795 cel1; Cellulase 1 precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D YIM_19830 celB; Endoglucanase E-2 precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D YIM_19870 Endoglucanase E1 precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D YIM_19835 cbhA; Exoglucanase A precursor K19668 CBH2; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.91]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:amyy04148]
D YIM_37940 arg; Arginase K01476 rocF; arginase [EC:3.5.3.1]
D YIM_39780 rocF2; Arginase K01476 rocF; arginase [EC:3.5.3.1]
D YIM_09150 rocF1; Arginase K01476 rocF; arginase [EC:3.5.3.1]
D YIM_37960 ldc2; Lysine/ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D YIM_14305 ldc1; Lysine/ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:amyy02024]
D YIM_12805 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D YIM_14020 lasA; Protease LasA precursor K08642 lasA; LasA protease [EC:3.4.24.-]
D YIM_39525 aroH; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YIM_14155 aroG2; Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YIM_12925 aroG1; Phospho-2-dehydro-3-deoxyheptonate aldolase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YIM_25990 aroF; Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YIM_25140 Phenazine biosynthesis-like protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D YIM_11100 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D YIM_20840 gadB; Glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D YIM_18835 gadC; Glutamate/gamma-aminobutyrate antiporter K20265 gadC; glutamate:GABA antiporter
D YIM_30640 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YIM_32100 braC; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YIM_34920 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YIM_28505 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YIM_30645 Branched-chain amino acid transport system / permease component K01997 livH; branched-chain amino acid transport system permease protein
D YIM_28495 livH2; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D YIM_32095 livH4; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D YIM_34915 livH6; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D YIM_30650 lsrA; Autoinducer 2 import ATP-binding protein LsrA K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YIM_28500 livH3; High-affinity branched-chain amino acid transport system permease protein LivH K01998 livM; branched-chain amino acid transport system permease protein
D YIM_34910 livH5; High-affinity branched-chain amino acid transport system permease protein LivH K01998 livM; branched-chain amino acid transport system permease protein
D YIM_28485 opuCA3; Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YIM_32085 ybhF4; putative ABC transporter ATP-binding protein YbhF K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YIM_34905 lptB2; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YIM_30655 livF3; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YIM_23165 livF1; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YIM_28490 livF2; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YIM_32080 livF4; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YIM_34900 livF5; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YIM_15815 pel; Pectate trisaccharide-lyase precursor K01728 pel; pectate lyase [EC:4.2.2.2]
D YIM_34970 pelA2; Pectate trisaccharide-lyase precursor K01728 pel; pectate lyase [EC:4.2.2.2]
D YIM_17375 Inclusion body protein K20275 aidA; nematocidal protein AidA
D YIM_45350 Long-chain-fatty-acid--CoA ligase FadD13 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_42735 lcfB10; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_14090 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_14545 Long-chain-fatty-acid--CoA ligase FadD13 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_27425 lcfB6; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_20780 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_21895 lcfB4; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_02205 crp2; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D YIM_01340 crp1; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D YIM_19770 manA2; Mannan endo-1,4-beta-mannosidase precursor K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D YIM_43515 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D YIM_35780 ygiS; Putative binding protein YgiS precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D YIM_04850 oppA; Oligopeptide-binding protein OppA precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D YIM_04855 dppB2; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein
D YIM_04860 gsiD3; Glutathione transport system permease protein GsiD K15582 oppC; oligopeptide transport system permease protein
D YIM_04865 oppD3; Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D YIM_04870 oppF3; Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D YIM_17500 gsiB5; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_01975 dppA1; Periplasmic dipeptide transport protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_16515 dppA3; Periplasmic dipeptide transport protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_16735 gsiB3; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_17130 gsiB4; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_12830 gsiB2; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_00280 gsiB1; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_21925 gsiB6; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_21930 nikA; Nickel-binding periplasmic protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_23245 gsiB7; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_24320 dppA5; Periplasmic dipeptide transport protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_20310 hbpA1; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_32620 hbpA2; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_32810 gsiB8; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_36715 gsiB9; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_17505 gsiC5; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_01980 dppB1; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_16520 gsiC3; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_16740 gsiC4; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_17125 nikB1; Nickel transport system permease protein NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_12835 gsiC2; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_00285 gsiC1; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_21775 gsiC7; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_23240 ddpC6; putative D,D-dipeptide transport system permease protein DdpC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_24325 dppB4; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_20305 gsiC6; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_32635 nikB2; Nickel transport system permease protein NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_32820 gsiC8; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_36725 dppB5; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_17510 ddpC5; putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YIM_01985 gsiD2; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YIM_16525 ddpC2; putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YIM_16745 ddpC3; putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YIM_17120 ddpC4; putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YIM_12840 ddpC1; putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YIM_00290 gsiD1; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YIM_21780 gsiD4; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YIM_32640 oppD9; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_24330 dppC; Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YIM_20300 oppD7; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_32825 ddpD; putative D,D-dipeptide transport ATP-binding protein DdpD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_36720 gsiD5; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YIM_17515 gsiA3; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_05425 gsiA1; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_01990 oppD2; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_16750 oppD5; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_12845 gsiA2; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_00295 oppD1; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_21785 oppD8; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_36710 oppD10; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_17115 oppD6; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_16530 oppD4; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_01995 oppF2; Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D YIM_16535 oppF4; Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D YIM_43105 yidC1; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YIM_48285 yidC2; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YIM_44555 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D YIM_18040 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D YIM_44150 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D YIM_17440 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D YIM_05560 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YIM_06580 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YIM_11155 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D YIM_11310 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D YIM_17615 plcN; Non-hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D YIM_28450 plcB; Phospholipase C 2 precursor K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:amyy02030]
D YIM_31830 rbsB3; D-ribose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D YIM_39870 rbsB5; D-ribose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D YIM_44345 ytfQ3; ABC transporter periplasmic-binding protein YtfQ precursor K10439 rbsB; ribose transport system substrate-binding protein
D YIM_09085 rbsB1; D-ribose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D YIM_38705 rbsB4; D-ribose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D YIM_41525 cheB3; Chemotaxis response regulator protein-glutamate methylesterase of group 3 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D YIM_41535 cheR; Chemotaxis protein methyltransferase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
C 02040 Flagellar assembly [PATH:amyy02040]
D YIM_21700 sigA1; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D YIM_31250 sigA2; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D YIM_11395 sigD3; RNA polymerase sigma-D factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D YIM_04820 eno1; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YIM_33545 eno2; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:amyy04980]
D YIM_06420 Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D YIM_43070 putative GTPase K07588 MMAA; GTPase [EC:3.6.5.-]
D YIM_09045 putative GTPase K07588 MMAA; GTPase [EC:3.6.5.-]
D YIM_43075 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D YIM_43080 mutA; Methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D YIM_27390 metH1; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D YIM_36155 metH2; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:amyy01501]
D YIM_02340 ybbD1; putative lipoprotein YbbD precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D YIM_27980 Beta-hexosaminidase A precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D YIM_25505 ybbD2; putative lipoprotein YbbD precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D YIM_35780 ygiS; Putative binding protein YgiS precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D YIM_04850 oppA; Oligopeptide-binding protein OppA precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D YIM_04855 dppB2; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein
D YIM_04860 gsiD3; Glutathione transport system permease protein GsiD K15582 oppC; oligopeptide transport system permease protein
D YIM_04865 oppD3; Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D YIM_04870 oppF3; Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D YIM_35250 htpX2; Protease HtpX K02172 blaR1; bla regulator protein blaR1
D YIM_35245 blaI2; Transcriptional regulator BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D YIM_22935 blaI1; Transcriptional regulator BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D YIM_40010 blaB2; Beta-lactamase regulatory protein BlaB K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D YIM_39155 penPC; Beta-lactamase 1 precursor K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D YIM_08600 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D YIM_35640 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:amyy01502]
D YIM_36555 czcS; Sensor protein CzcS precursor K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D YIM_20800 mprA2; Response regulator MprA K18352 vanRAc; two-component system, OmpR family, response regulator VanR
D YIM_36560 cusR; Transcriptional regulatory protein CusR K18352 vanRAc; two-component system, OmpR family, response regulator VanR
D YIM_44415 vanX2; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D YIM_33815 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D YIM_36540 vanX1; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D YIM_48250 ddl2; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YIM_10210 ddl1; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YIM_43890 alr2; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D YIM_20500 alr1; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D YIM_36530 vanH; D-specific alpha-keto acid dehydrogenase K18347 vanH; D-specific alpha-keto acid dehydrogenase [EC:1.1.1.-]
D YIM_36535 vanB; Vancomycin B-type resistance protein VanB K15739 vanB; D-alanine---(R)-lactate ligase [EC:6.1.2.1]
D YIM_13880 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D YIM_13885 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D YIM_13900 murG1; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D YIM_36550 murG2; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D YIM_36565 vanYB1; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D YIM_39210 vanYB2; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:amyy01503]
D YIM_48235 lytC; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YIM_01955 cwlD; Germination-specific N-acetylmuramoyl-L-alanine amidase precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YIM_42395 degP2; Periplasmic serine endoprotease DegP precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D YIM_00125 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D YIM_36590 mprF; Phosphatidylglycerol lysyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:amyy01000]
C 01001 Protein kinases [BR:amyy01001]
D YIM_11840 RIO1 family protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D YIM_45830 pknG2; Serine/threonine-protein kinase PknG K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1]
D YIM_28685 pknG1; Serine/threonine-protein kinase PknG K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1]
D YIM_03400 pknE1; Serine/threonine-protein kinase PknE K22893 pknH; serine/threonine kinase PknH [EC:2.7.11.1]
D YIM_29720 pknK1; Serine/threonine-protein kinase PknK K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_00175 pknB1; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_12955 spk1; Serine/threonine-protein kinase PK-1 K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_00180 pknA1; Serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_30925 pknA5; Serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_46660 afsK9; Serine/threonine-protein kinase AfsK K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_46665 afsK10; Serine/threonine-protein kinase AfsK K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_15680 afsK1; Serine/threonine-protein kinase AfsK K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_46075 pknL4; Serine/threonine-protein kinase PknL K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_12105 prkC2; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_12655 pknB2; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_17025 afsK2; Serine/threonine-protein kinase AfsK K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_00355 pknH2; Serine/threonine-protein kinase PknH K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_00360 pknA2; Serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_04590 pknA3; Serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_30310 afsK5; Serine/threonine-protein kinase AfsK K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_24625 afsK3; Serine/threonine-protein kinase AfsK K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_27955 stkP; Serine/threonine-protein kinase StkP K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_28695 pknL2; Serine/threonine-protein kinase PknL K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_24630 afsK4; Serine/threonine-protein kinase AfsK K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_30550 prkC4; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_35830 pknA6; Serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_36980 afsK6; Serine/threonine-protein kinase AfsK K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_36985 afsK7; Serine/threonine-protein kinase AfsK K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_40540 pknK2; Serine/threonine-protein kinase PknK K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_43670 pknA8; Serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_43085 pknA7; Serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D YIM_07120 rsbT1; Serine/threonine-protein kinase RsbT K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D YIM_41265 rsbW4; Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D YIM_01460 rsbW1; Anti-sigma-F factor RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D YIM_23860 rsbW3; Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D YIM_19570 rsbW2; Anti-sigma-F factor RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D YIM_41520 serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D YIM_45425 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D YIM_11095 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D YIM_04350 mprB1; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D YIM_05540 mtrB2; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D YIM_01810 mtrB1; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D YIM_34245 mtrB3; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D YIM_36555 czcS; Sensor protein CzcS precursor K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D YIM_01925 tcrY1; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YIM_08310 tcrY2; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YIM_28010 tcrY3; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YIM_29960 arlS3; Signal transduction histidine-protein kinase ArlS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YIM_34595 tcrY5; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YIM_40565 rstB; Sensor protein RstB K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YIM_41105 tcrY7; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YIM_26725 nreB5; Oxygen sensor histidine kinase NreB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D YIM_38070 desK19; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D YIM_44425 desK21; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D YIM_01645 desK2; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D YIM_21030 desK12; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D YIM_01830 devS2; Redox sensor histidine kinase response regulator DevS K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D YIM_23835 dosT; Hypoxia sensor histidine kinase response regulator DosT K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D YIM_09455 devS3; Redox sensor histidine kinase response regulator DevS K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D YIM_00855 devS1; Redox sensor histidine kinase response regulator DevS K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D YIM_46415 dcuS2; Sensor histidine kinase DcuS K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D YIM_00665 yehU; Sensor histidine kinase YehU K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D YIM_10870 ypdA; Sensor histidine kinase YpdA K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D YIM_23120 fixL; Sensor protein FixL K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D YIM_05640 pdtaS; putative sensor histidine kinase pdtaS K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:amyy01009]
D YIM_41090 ahcY2; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D YIM_05520 ahcY1; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D YIM_39405 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D YIM_05945 stp3; Serine/threonine phosphatase stp K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D YIM_12645 pstP2; PP2C-family Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D YIM_00195 pstP1; PP2C-family Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D YIM_08590 stp4; Serine/threonine phosphatase stp K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D YIM_41745 serB1; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:amyy01002]
D YIM_14040 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D YIM_17760 Type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D YIM_07495 Type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D YIM_43710 guaA2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D YIM_10575 Putative glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase
D YIM_12410 putative endopeptidase precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D YIM_22940 iap2; putative endopeptidase p60 precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D YIM_06990 ripA2; Peptidoglycan endopeptidase RipA precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D YIM_12400 ripB; Peptidoglycan endopeptidase RipB precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D YIM_41820 iap5; putative endopeptidase p60 precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D YIM_27615 ripA4; Peptidoglycan endopeptidase RipA precursor K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D YIM_46440 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D YIM_40160 gltB3; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D YIM_12895 gltB1; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D YIM_43940 glmS4; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D YIM_03225 glmS1; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D YIM_26110 glmS3; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D YIM_40840 asnB5; Asparagine synthetase [glutamine-hydrolyzing] 1 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YIM_41080 asnB6; Asparagine synthetase [glutamine-hydrolyzing] 1 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YIM_11065 asnO1; Asparagine synthetase [glutamine-hydrolyzing] 3 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YIM_12320 asnB1; Putative asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YIM_21505 asnB2; Asparagine synthetase [glutamine-hydrolyzing] 1 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YIM_25090 asnO2; Asparagine synthetase [glutamine-hydrolyzing] 3 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YIM_29260 asnB3; Putative asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YIM_36385 asnB4; Asparagine synthetase B [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YIM_16765 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase K19200 IAL; isopenicillin-N N-acyltransferase like protein
D YIM_16010 yraA1; Putative cysteine protease YraA K05520 yhbO; deglycase [EC:3.5.1.124]
D YIM_19610 yraA2; Putative cysteine protease YraA K05520 yhbO; deglycase [EC:3.5.1.124]
D YIM_00145 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D YIM_34115 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D YIM_11320 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D YIM_11325 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D YIM_34530 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D YIM_01860 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D YIM_17385 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D YIM_20335 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D YIM_39045 pepN3; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D YIM_24275 dcp; Peptidyl-dipeptidase dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D YIM_03590 snpA1; Extracellular small neutral protease precursor K01416 snpA; snapalysin [EC:3.4.24.77]
D YIM_08155 snpA2; Extracellular small neutral protease K01416 snpA; snapalysin [EC:3.4.24.77]
D YIM_02535 scpD; Zinc carboxypeptidase precursor K05996 cpt; carboxypeptidase T [EC:3.4.17.18]
D YIM_30725 Zinc D-Ala-D-Ala carboxypeptidase precursor K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D YIM_36565 vanYB1; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D YIM_39210 vanYB2; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D YIM_44415 vanX2; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D YIM_33815 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D YIM_36540 vanX1; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D YIM_42020 ptrA2; Protease 3 precursor K07263 pqqL; zinc protease [EC:3.4.24.-]
D YIM_42425 pepA2; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D YIM_12235 pepA1; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D YIM_35635 Membrane dipeptidase (Peptidase family M19) K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D YIM_20525 cpg1; Carboxypeptidase G2 precursor K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D YIM_20655 cpg2; Carboxypeptidase G2 precursor K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D YIM_42505 dapE5; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D YIM_34775 dapE4; putative succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D YIM_14020 lasA; Protease LasA precursor K08642 lasA; LasA protease [EC:3.4.24.-]
D YIM_44140 map-1; Methionine aminopeptidase 1 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D YIM_11775 map1; Methionine aminopeptidase 2 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D YIM_16130 map2; Methionine aminopeptidase 1 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D YIM_09430 lieA2; Leupeptin-inactivating enzyme 1 precursor K19702 E3.4.11.24; aminopeptidase S [EC:3.4.11.24]
D YIM_00620 ywaD; Aminopeptidase YwaD precursor K19701 ywaD; aminopeptidase YwaD [EC:3.4.11.6 3.4.11.10]
D YIM_02625 ftsH1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D YIM_44830 hypothetical protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D YIM_08030 dppA2; D-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D YIM_24315 dppA4; D-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D YIM_35250 htpX2; Protease HtpX K02172 blaR1; bla regulator protein blaR1
D YIM_02665 prsW; Protease PrsW K24131 prsW; protease PrsW [EC:3.4.-.-]
D YIM_42395 degP2; Periplasmic serine endoprotease DegP precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D YIM_04365 degP1; Periplasmic serine endoprotease DegP precursor K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D YIM_08950 htrA; Putative serine protease HtrA K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D YIM_28325 sprA; Streptogrisin-A precursor K18546 sprC; streptogrisin C [EC:3.4.21.-]
D YIM_28350 alpha-LP1; Alpha-lytic protease precursor K18546 sprC; streptogrisin C [EC:3.4.21.-]
D YIM_36505 alpha-LP2; Alpha-lytic protease precursor K18546 sprC; streptogrisin C [EC:3.4.21.-]
D YIM_44600 sprD3; Streptogrisin-D precursor K18547 sprD; streptogrisin D [EC:3.4.21.-]
D YIM_34960 sprD2; Streptogrisin-D precursor K18547 sprD; streptogrisin D [EC:3.4.21.-]
D YIM_24680 sprD1; Streptogrisin-D precursor K18547 sprD; streptogrisin D [EC:3.4.21.-]
D YIM_44055 apr6; Subtilisin DY K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D YIM_12500 Thermophilic serine proteinase precursor K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D YIM_29735 apr3; Subtilisin DY K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D YIM_13700 Prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D YIM_30795 ptpA5; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D YIM_43375 dacF; D-alanyl-D-alanine carboxypeptidase DacF precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YIM_02585 dacB; D-alanyl-D-alanine carboxypeptidase DacB precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D YIM_35070 clpP1; ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D YIM_38810 clpP2; ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D YIM_38815 clpP3; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D YIM_13740 pepX1; Xaa-Pro dipeptidyl-peptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D YIM_36115 pepX2; Xaa-Pro dipeptidyl-peptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D YIM_44635 lon3; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D YIM_06725 lon1; Lon protease 1 K07177 K07177; Lon-like protease
D YIM_13610 lexA1; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D YIM_25845 lexA2; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D YIM_02810 lepB1; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D YIM_11355 lepB2; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D YIM_37685 Peptidase S24-like protein K03100 lepB; signal peptidase I [EC:3.4.21.89]
D YIM_41775 pip6; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D YIM_09260 pip3; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D YIM_06145 pip2; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D YIM_40620 pip5; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D YIM_24715 ctpA; Carboxy-terminal processing protease CtpA precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D YIM_29920 acyII; Penicillin acylase 2 precursor K01434 pac; penicillin G amidase [EC:3.5.1.11]
D YIM_24360 ykfA; putative murein peptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D YIM_48440 Caudovirus prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D YIM_13440 Caudovirus prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D YIM_27275 prcA2; Proteasome subunit alpha 2 K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D YIM_27280 prcB1; Proteasome subunit beta 1 precursor K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D YIM_00505 ywrD1; Putative gamma-glutamyltransferase YwrD K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YIM_17895 ggt; Gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YIM_25165 ywrD2; Putative gamma-glutamyltransferase YwrD K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C 01003 Glycosyltransferases [BR:amyy01003]
D YIM_25005 Undecaprenyl-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D YIM_04605 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D YIM_17345 pimA2; GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D YIM_12415 pimB2; GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D YIM_45140 pimC; GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D YIM_01070 pimA1; GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D YIM_45145 mgtA; GDP-mannose-dependent alpha-mannosyltransferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D YIM_09435 Glycogen synthase K16150 K16150; glycogen synthase [EC:2.4.1.11]
D YIM_44960 tagA; Putative N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D YIM_06345 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D YIM_42755 Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D YIM_42760 Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D YIM_10500 Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D YIM_03780 Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D YIM_28245 Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D YIM_30755 Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D YIM_24340 hypothetical protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D YIM_01755 hypothetical protein K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D YIM_18140 hypothetical protein K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D YIM_35535 embC; putative arabinosyltransferase C K11387 embC; arabinosyltransferase C [EC:2.4.2.-]
D YIM_01270 glfT2; Galactofuranosyl transferase GlfT1 K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D YIM_01240 glfT1; Galactofuranosyl transferase GlfT2 K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
D YIM_42600 wbbL3; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D YIM_44945 wbbL6; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D YIM_32490 mshA2; D-inositol 3-phosphate glycosyltransferase K26815 manT; MMP alpha-(1->4)-mannosyltransferase [EC:2.4.1.393]
D YIM_06925 rebG1; 4'-demethylrebeccamycin synthase K05841 E2.4.1.173; sterol 3beta-glucosyltransferase [EC:2.4.1.173]
D YIM_32835 rebG4; 4'-demethylrebeccamycin synthase K05841 E2.4.1.173; sterol 3beta-glucosyltransferase [EC:2.4.1.173]
D YIM_39320 eryCIII6; Desosaminyl transferase EryCIII precursor K05841 E2.4.1.173; sterol 3beta-glucosyltransferase [EC:2.4.1.173]
D YIM_02900 otsA; Trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D YIM_09775 gpgS; Glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:amyy01005]
D YIM_33435 gmhA1; Phosphoheptose isomerase 1 K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D YIM_33430 hldE; Bifunctional protein HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D YIM_06345 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:amyy01011]
D YIM_06425 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D YIM_45480 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D YIM_13905 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D YIM_13890 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D YIM_13875 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D YIM_48250 ddl2; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YIM_10210 ddl1; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YIM_43890 alr2; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D YIM_20500 alr1; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D YIM_41620 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D YIM_24360 ykfA; putative murein peptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D YIM_13885 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D YIM_13900 murG1; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D YIM_36550 murG2; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D YIM_24265 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YIM_48205 mviN1; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D YIM_35640 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D YIM_00185 pbpA1; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D YIM_43375 dacF; D-alanyl-D-alanine carboxypeptidase DacF precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YIM_02585 dacB; D-alanyl-D-alanine carboxypeptidase DacB precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D YIM_44415 vanX2; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D YIM_33815 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D YIM_36540 vanX1; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D YIM_36565 vanYB1; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D YIM_39210 vanYB2; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D YIM_30725 Zinc D-Ala-D-Ala carboxypeptidase precursor K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D YIM_12410 putative endopeptidase precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D YIM_22940 iap2; putative endopeptidase p60 precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D YIM_06990 ripA2; Peptidoglycan endopeptidase RipA precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D YIM_12400 ripB; Peptidoglycan endopeptidase RipB precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D YIM_41820 iap5; putative endopeptidase p60 precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D YIM_27615 ripA4; Peptidoglycan endopeptidase RipA precursor K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D YIM_00145 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D YIM_17650 putative aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D YIM_48235 lytC; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YIM_01955 cwlD; Germination-specific N-acetylmuramoyl-L-alanine amidase precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:amyy01004]
D YIM_11985 fabD2; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YIM_40420 fabH3; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D YIM_01425 fabH1; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D YIM_11970 kasA; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_25680 fabF1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_25685 fabF2; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_25700 fabF4; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_26850 fabF5; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_26860 fabF6; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_26865 fabF7; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_26875 fabF8; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_26880 fabF9; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_26885 fabF10; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_39345 ppsA5; Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YIM_46100 fabG40; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_47295 fabG42; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_01125 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_18490 novJ1; Short-chain reductase protein NovJ K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_17230 fabG10; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_21810 fabG15; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_23145 tsaC2; 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_24145 fabG17; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_25690 fabG19; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_26815 fabG21; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_19560 fabG13; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_33180 fabG30; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_48000 fabG43; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_48085 bdcA4; Cyclic-di-GMP-binding biofilm dispersal mediator protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_30605 fabG29; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_34675 fabG31; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_38765 ycdF2; Glucose 1-dehydrogenase 2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_43800 bdcA3; Cyclic-di-GMP-binding biofilm dispersal mediator protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_21250 xecD1; 2-(R)-hydroxypropyl-CoM dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YIM_26905 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YIM_26820 fabZ1; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YIM_26825 fabZ2; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YIM_26900 fabZ3; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YIM_34860 Nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D YIM_26855 fabL; Enoyl-[acyl-carrier-protein] reductase [NADPH] FabL K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D YIM_16280 GDSL-like Lipase/Acylhydrolase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D YIM_36330 GDSL-like Lipase/Acylhydrolase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D YIM_14195 tesB1; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D YIM_23460 tesB2; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D YIM_23715 fabH2; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K11608 mtfabH; mycobacterial beta-ketoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.301]
D YIM_27550 fabG22; 3-oxoacyl-[acyl-carrier-protein] reductase FabG1 K11610 mabA; beta-ketoacyl ACP reductase [EC:1.1.1.100]
D YIM_27545 inhA4; Enoyl-[acyl-carrier-protein] reductase [NADH] K11611 inhA; meromycolic acid enoyl-[acyl-carrier-protein] reductase [EC:1.3.1.118]
D YIM_04745 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D YIM_18120 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D YIM_15220 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D YIM_07945 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D YIM_12685 desA2; Putative acyl-[acyl-carrier-protein] desaturase desA1 K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D YIM_11915 desA1; Stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D YIM_21085 desA3; Stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D YIM_33630 ppsA4; Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA K12443 ppsD; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D [EC:2.3.1.292]
D YIM_42700 ppsA7; Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA K12443 ppsD; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D [EC:2.3.1.292]
D YIM_23710 Actinorhodin polyketide synthase acyl carrier protein K05553 actI3; minimal PKS acyl carrier protein
D YIM_02300 acsA2; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_22955 acsA4; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_27790 acsA5; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_32790 acsA6; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YIM_04585 acsA3; Acetyl-coenzyme A synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D YIM_01495 acsA1; Acetyl-coenzyme A synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D YIM_01380 succinyl-CoA synthetase subunit alpha K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D YIM_23465 hypothetical protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D YIM_45350 Long-chain-fatty-acid--CoA ligase FadD13 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_42735 lcfB10; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_14090 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_14545 Long-chain-fatty-acid--CoA ligase FadD13 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_27425 lcfB6; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_20780 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_21895 lcfB4; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_43970 Long-chain-fatty-acid--AMP ligase FadD32 K12428 fadD32; fatty acid CoA ligase FadD32
D YIM_33635 Long-chain-fatty-acid--AMP ligase FadD32 K12428 fadD32; fatty acid CoA ligase FadD32
D YIM_40875 fadK3; Short-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D YIM_04690 Putative ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D YIM_18645 Long-chain-fatty-acid--CoA ligase FadD13 K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D YIM_03605 fadK1; Short-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D YIM_28565 lcfB7; Long-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D YIM_27045 Putative ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D YIM_21195 lcfB3; Long-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D YIM_46210 plsC7; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D YIM_14145 plsC4; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D YIM_31305 plsC5; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D YIM_40320 eryA11; Erythronolide synthase, modules 3 and 4 K12434 pks7; polyketide synthase 7
C 01008 Polyketide biosynthesis proteins [BR:amyy01008]
D YIM_33630 ppsA4; Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA K12443 ppsD; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D [EC:2.3.1.292]
D YIM_42700 ppsA7; Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA K12443 ppsD; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D [EC:2.3.1.292]
D YIM_40785 ppsA6; Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA K15314 sgcE; enediyne polyketide synthase
D YIM_23710 Actinorhodin polyketide synthase acyl carrier protein K05553 actI3; minimal PKS acyl carrier protein
D YIM_19405 Metallo-beta-lactamase superfamily protein K05555 actIV; cyclase [EC:4.-.-.-]
D YIM_22225 Alpha-pyrone synthesis polyketide synthase-like Pks11 K16424 dpgA; 3,5-dihydroxyphenylacetyl-CoA synthase [EC:2.3.1.246]
D YIM_39185 srfAA; Surfactin synthase subunit 1 K12743 PCBAB; N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase [EC:6.3.2.26]
D YIM_40210 MbtH-like protein K05375 mbtH; MbtH protein
D YIM_18515 MbtH-like protein K05375 mbtH; MbtH protein
D YIM_18520 MbtH-like protein K05375 mbtH; MbtH protein
D YIM_17240 MbtH-like protein K05375 mbtH; MbtH protein
D YIM_22885 MbtH-like protein K05375 mbtH; MbtH protein
D YIM_32320 MbtH-like protein K05375 mbtH; MbtH protein
D YIM_25775 MbtH-like protein K05375 mbtH; MbtH protein
D YIM_25315 MbtH-like protein K05375 mbtH; MbtH protein
D YIM_26035 dhbB2; Isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D YIM_26040 dhbE; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D YIM_40780 1,4-dihydroxy-2-naphthoyl-CoA hydrolase K15315 sgcE10; enediyne core biosynthesis thioesterase
D YIM_22710 lcdH1; L-carnitine dehydrogenase K05556 actVI1; ketoreductase RED1 [EC:1.1.1.-]
D YIM_39550 Cytochrome P450-SU1 K16389 amphN; cytochrome P450 monooxygenase
D YIM_39555 penM; Pentalenolactone synthase K16390 amphL; cytochrome P450 monooxygenase
D YIM_37285 Cytochrome P450 107B1 K20420 ncsB3; 2-hydroxy-5-methyl-1-naphthoate 7-hydroxylase [EC:1.14.15.31]
D YIM_40790 Cytochrome P450 107B1 K20420 ncsB3; 2-hydroxy-5-methyl-1-naphthoate 7-hydroxylase [EC:1.14.15.31]
D YIM_40820 nphA2; 4-nitrophenol 2-monooxygenase, oxygenase component K21184 sgcC; two-component FAD-dependent monooxygenase [EC:1.14.14.15 1.14.14.-]
D YIM_42885 Fluoroacetate dehalogenase K21159 sgcF; epoxide hydrolase
D YIM_18405 Fluoroacetate dehalogenase K21159 sgcF; epoxide hydrolase
D YIM_04210 dhmA2; Haloalkane dehalogenase K21159 sgcF; epoxide hydrolase
D YIM_33920 Soluble epoxide hydrolase K21159 sgcF; epoxide hydrolase
D YIM_24530 haloalkane dehalogenase K21159 sgcF; epoxide hydrolase
D YIM_25920 hypothetical protein K21159 sgcF; epoxide hydrolase
D YIM_26600 hypothetical protein K21159 sgcF; epoxide hydrolase
D YIM_29860 Soluble epoxide hydrolase K21159 sgcF; epoxide hydrolase
D YIM_22215 caiD5; Carnitinyl-CoA dehydratase K16427 dpgC; (3,5-dihydroxyphenyl)acetyl-CoA 1,2-dioxygenase [EC:1.13.11.80]
D YIM_41465 tfdB2; 2,4-dichlorophenol 6-monooxygenase K14672 whiEVIII; putative polyketide hydroxylase
D YIM_09465 dnrK1; Carminomycin 4-O-methyltransferase K20421 ncsB1; 2,7-dihydroxy-5-methyl-1-naphthoate 7-O-methyltransferase [EC:2.1.1.303]
D YIM_15125 dnrK2; Carminomycin 4-O-methyltransferase K20421 ncsB1; 2,7-dihydroxy-5-methyl-1-naphthoate 7-O-methyltransferase [EC:2.1.1.303]
D YIM_39540 rebG5; 4'-demethylrebeccamycin synthase K16388 amphDI; polyene glycosyltransferase
D YIM_16050 lodB; Putative FAD-dependent oxidoreductase LodB K16431 cepH; FAD-dependent halogenase [EC:1.14.19.-]
D YIM_38365 hypothetical protein K14627 actVI3; dehydratase [EC:4.2.1.-]
D YIM_41025 hypothetical protein K21160 sgcE2; enediyne biosynthesis protein E2
D YIM_41020 hypothetical protein K21161 sgcE3; enediyne biosynthesis protein E3
D YIM_41015 ASPIC and UnbV K21162 sgcE4; enediyne biosynthesis protein E4
D YIM_41010 hypothetical protein K21163 sgcE5; enediyne biosynthesis protein E5
D YIM_41005 Epi-isozizaene 5-monooxygenase/(E)-beta-farnesene synthase K21164 sgcE7; enediyne biosynthesis protein E7
D YIM_41000 hypothetical protein K21165 sgcE8; enediyne biosynthesis protein E8
D YIM_40995 choA2; Cholesterol oxidase precursor K21166 sgcE9; enediyne biosynthesis protein E9
D YIM_40975 hypothetical protein K21167 sgcE11; enediyne biosynthesis protein E11
D YIM_40805 lgrB10; Linear gramicidin synthase subunit B K21186 sgcC5; condensation enzyme
D YIM_40775 hsaB2; Flavin-dependent monooxygenase, reductase subunit HsaB K21185 sgcE6; flavin reductase
D YIM_26400 novM3; L-noviosyl transferase K16444 gtfB; vancomycin aglycone glucosyltransferase [EC:2.4.1.310]
D YIM_39180 cefE1; Deacetoxycephalosporin C synthase K04126 PCBC; isopenicillin-N synthase [EC:1.21.3.1]
D YIM_39195 cefD; Isopenicillin N epimerase K04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17]
D YIM_39200 cefE2; Deacetoxycephalosporin C synthase K12744 cefE; deacetoxycephalosporin-C synthase [EC:1.14.20.1]
D YIM_39165 cefF; Deacetoxycephalosporin C hydroxylase K12745 cefF; deacetoxycephalosporin-C hydroxylase [EC:1.14.11.26]
D YIM_39160 novN2; Decarbamoylnovobiocin carbamoyltransferase K04128 cmcH; hydroxymethyl cephem carbamoyltransferase [EC:2.1.3.7]
D YIM_39175 Rhamnosyl O-methyltransferase precursor K18062 cmcI; cephamycin C biosynthesis protein
D YIM_39170 hypothetical protein K18063 cmcJ; cephamycin C biosynthesis protein
D YIM_21185 Lactate 2-monooxygenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D YIM_22195 caiD4; Carnitinyl-CoA dehydratase K16426 dpgD; dehydration protein DpgD
D YIM_40855 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D YIM_25325 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:amyy01006]
D YIM_12985 (2E,6E)-farnesyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D YIM_28150 (2E,6E)-farnesyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D YIM_05135 uppS1; (2Z,6E)-farnesyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D YIM_38140 uppS2; Decaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D YIM_12975 crtB; All-trans-phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D YIM_13205 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D YIM_45190 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D YIM_18085 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D YIM_01195 Decaprenyl-phosphate phosphoribosyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45]
C 01007 Amino acid related enzymes [BR:amyy01007]
D YIM_09720 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YIM_31435 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D YIM_43405 trpS2; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D YIM_05380 trpS1; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D YIM_38880 argS2; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YIM_06270 argS1; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YIM_04655 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D YIM_14000 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D YIM_38745 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D YIM_48095 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D YIM_41765 lysX2; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D YIM_02685 lysX1; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D YIM_17575 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D YIM_08345 asnS; Asparagine--tRNA ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D YIM_43155 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D YIM_38085 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D YIM_00995 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D YIM_11875 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D YIM_17315 thrS1; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D YIM_37460 thrS2; Threonine--tRNA ligase 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D YIM_17640 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D YIM_28300 pheS1; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D YIM_31515 pheS2; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D YIM_31510 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D YIM_25250 aspC1; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D YIM_44565 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D YIM_45610 dapC; putative N-succinyldiaminopimelate aminotransferase DapC K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D YIM_22920 aruH1; Arginine--pyruvate transaminase AruH K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D YIM_01470 pat1; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_15150 pat2; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_12590 hisC1; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_29495 hisC2; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_35495 cobD2; Threonine-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YIM_01560 bioF1; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D YIM_11825 bioF2; 8-amino-7-oxononanoate synthase 1 K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D YIM_39190 lat; L-lysine-epsilon aminotransferase K03918 lat; L-lysine 6-transaminase [EC:2.6.1.36]
D YIM_30805 rocD2; Ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D YIM_31480 argD1; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D YIM_41785 davT2; 5-aminovalerate aminotransferase DavT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D YIM_16720 gabT1; 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D YIM_05970 davT1; 5-aminovalerate aminotransferase DavT K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YIM_38235 argD2; Acetylornithine aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YIM_03155 ectB; Diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D YIM_23100 bioK; L-Lysine-8-amino-7-oxononanoate aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D YIM_12445 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D YIM_34545 dgdA; 2,2-dialkylglycine decarboxylase K00596 E4.1.1.64; 2,2-dialkylglycine decarboxylase (pyruvate) [EC:4.1.1.64]
D YIM_45250 hemL2; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D YIM_21545 hemL1; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D YIM_12255 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YIM_16350 Soluble hydrogenase 42 kDa subunit K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D YIM_26680 Soluble hydrogenase 42 kDa subunit K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D YIM_03790 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D YIM_01105 arnB2; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D YIM_21480 arnB4; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D YIM_39545 epsN; Putative pyridoxal phosphate-dependent aminotransferase EpsN K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450 [BR:amyy00199]
D YIM_14520 Steroid C26-monooxygenase K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29]
D YIM_27480 Epi-isozizaene 5-monooxygenase/(E)-beta-farnesene synthase K24241 CYP135; cytochrome P450 family 135 [EC:1.14.-.-]
D YIM_24070 vdh1; Vitamin D(3) 25-hydroxylase K22553 CYP199A2; 4-methoxybenzoate monooxygenase (O-demethylating) [EC:1.14.99.15]
C 00194 Photosynthesis proteins [BR:amyy00194]
D YIM_06405 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D YIM_06400 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D YIM_06395 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D YIM_06390 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D YIM_06385 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D YIM_06380 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D YIM_06375 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D YIM_37645 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D YIM_06370 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:amyy03000]
D YIM_44775 ydiP2; putative BsuMI modification methylase subunit YdiP K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YIM_01545 aplIM1; Modification methylase AplI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YIM_07770 ydiP1; putative BsuMI modification methylase subunit YdiP K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YIM_21710 aplIM2; Modification methylase AplI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YIM_34265 cdhR11; HTH-type transcriptional regulator CdhR K07506 K07506; AraC family transcriptional regulator
D YIM_41030 melR; Melibiose operon regulatory protein K07506 K07506; AraC family transcriptional regulator
D YIM_05305 alkA1; DNA-3-methyladenine glycosylase 2 K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D YIM_18435 adaA; Bifunctional transcriptional activator/DNA repair enzyme AdaA K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D YIM_08285 cdhR3; HTH-type transcriptional regulator CdhR K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D YIM_41160 cdhR14; HTH-type transcriptional regulator CdhR K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D YIM_35060 cdhR13; HTH-type transcriptional regulator CdhR K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D YIM_34350 cdhR12; HTH-type transcriptional regulator CdhR K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D YIM_28705 putative HTH-type transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D YIM_28645 gltC12; HTH-type transcriptional regulator GltC K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator
D YIM_08255 cynR2; HTH-type transcriptional regulator CynR K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D YIM_34400 hcaR7; Hca operon transcriptional activator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D YIM_24185 glpR2; Glycerol-3-phosphate regulon repressor K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D YIM_24215 glpR3; Glycerol-3-phosphate regulon repressor K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D YIM_10415 srlR2; Glucitol operon repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D YIM_09105 cytR1; HTH-type transcriptional repressor CytR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YIM_18675 rbsR1; Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YIM_10760 degA1; HTH-type transcriptional regulator DegA K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YIM_21465 exuR1; putative HTH-type transcriptional repressor ExuR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YIM_31825 rbsR2; Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YIM_19710 degA3; HTH-type transcriptional regulator DegA K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YIM_20015 degA6; HTH-type transcriptional regulator DegA K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YIM_20675 kdgR3; HTH-type transcriptional regulator KdgR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YIM_32510 cytR5; HTH-type transcriptional repressor CytR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YIM_33000 degA7; HTH-type transcriptional regulator DegA K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YIM_41925 exuR3; putative HTH-type transcriptional repressor ExuR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YIM_46895 rbsR3; Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YIM_46900 rbsR4; Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YIM_17725 yvoA3; HTH-type transcriptional repressor YvoA K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D YIM_03230 dasR1; HTH-type transcriptional repressor DasR K24969 dasR; GntR family transcriptional regulator, nutrient-sensing system regulator
D YIM_37875 yvoA5; HTH-type transcriptional repressor YvoA K03710 K03710; GntR family transcriptional regulator
D YIM_46860 yvoA7; HTH-type transcriptional repressor YvoA K03710 K03710; GntR family transcriptional regulator
D YIM_14575 dasR2; HTH-type transcriptional repressor DasR K03710 K03710; GntR family transcriptional regulator
D YIM_16660 yvoA1; HTH-type transcriptional repressor YvoA K03710 K03710; GntR family transcriptional regulator
D YIM_29155 frlR; HTH-type transcriptional regulator FrlR K03710 K03710; GntR family transcriptional regulator
D YIM_39855 lutR9; HTH-type transcriptional regulator LutR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D YIM_43850 lutR11; HTH-type transcriptional regulator LutR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D YIM_16015 lldR3; Putative L-lactate dehydrogenase operon regulatory protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D YIM_00275 pdhR; Pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D YIM_23525 lutR5; HTH-type transcriptional regulator LutR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D YIM_26705 mce2R; HTH-type transcriptional regulator Mce2R K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D YIM_29070 lutR6; HTH-type transcriptional regulator LutR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D YIM_34020 gabR5; HTH-type transcriptional regulatory protein GabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D YIM_09070 gabR2; HTH-type transcriptional regulatory protein GabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D YIM_05205 gabR1; HTH-type transcriptional regulatory protein GabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D YIM_13710 gabR4; HTH-type transcriptional regulatory protein GabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D YIM_10205 gabR3; HTH-type transcriptional regulatory protein GabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D YIM_34540 ytrA3; HTH-type transcriptional repressor YtrA K07978 plmA; GntR family transcriptional regulator
D YIM_43395 tetR10; Tetracycline repressor protein class A K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D YIM_26950 tetR3; Tetracycline repressor protein class H K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D YIM_38555 nicS2; HTH-type transcriptional repressor NicS K09017 rutR; TetR/AcrR family transcriptional regulator
D YIM_45950 kstR21; HTH-type transcriptional repressor KstR2 K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D YIM_19305 rutR4; HTH-type transcriptional regulator RutR K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D YIM_41445 comR8; HTH-type transcriptional repressor ComR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D YIM_15690 comR2; HTH-type transcriptional repressor ComR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D YIM_21115 comR4; HTH-type transcriptional repressor ComR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D YIM_04165 yxaF1; putative HTH-type transcriptional regulator YxaF K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D YIM_23325 comR5; HTH-type transcriptional repressor ComR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D YIM_23375 comR6; HTH-type transcriptional repressor ComR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D YIM_27530 comR7; HTH-type transcriptional repressor ComR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D YIM_33250 ttgR6; HTH-type transcriptional regulator TtgR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D YIM_16100 bepR2; HTH-type transcriptional repressor BepR K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D YIM_30215 ethR3; HTH-type transcriptional regulator EthR K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator
D YIM_27695 acnR3; HTH-type transcriptional repressor AcnR K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
D YIM_14370 kstR8; HTH-type transcriptional repressor KstR K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D YIM_36665 kstR20; HTH-type transcriptional repressor KstR K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D YIM_01665 kstR2; HTH-type transcriptional repressor KstR2 K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D YIM_08230 transcriptional regulator BetI K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
D YIM_20630 transcriptional regulator BetI K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
D YIM_26630 transcriptional regulator BetI K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
D YIM_45205 lrp6; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YIM_47035 lrpC4; HTH-type transcriptional regulator LrpC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YIM_24565 lrpC2; HTH-type transcriptional regulator LrpC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YIM_27170 lrp2; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YIM_09540 asnC3; Regulatory protein AsnC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YIM_22945 vjbR; HTH-type quorum sensing-dependent transcriptional regulator VjbR K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
D YIM_32795 vraR11; Response regulator protein VraR K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
D YIM_18800 malT; HTH-type transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D YIM_10365 nicR1; HTH-type transcriptional repressor NicR K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D YIM_33915 nicR3; HTH-type transcriptional repressor NicR K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D YIM_29135 hosA2; Transcriptional regulator HosA K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D YIM_08825 ohrR1; Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D YIM_26475 ohrR3; Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D YIM_19475 ohrR2; Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D YIM_37375 slyA2; Transcriptional regulator SlyA K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D YIM_23235 hmrR2; HTH-type transcriptional regulator HmrR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D YIM_04975 soxR1; Redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D YIM_12625 soxR2; Redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D YIM_46965 hspR4; Putative heat shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D YIM_23555 hspR2; Putative heat shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D YIM_27470 tipA5; HTH-type transcriptional activator TipA K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D YIM_26765 tipA3; HTH-type transcriptional activator TipA K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D YIM_43785 hypothetical protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D YIM_38105 zur; Zinc uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D YIM_10005 furA1; Transcriptional regulator FurA K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D YIM_24030 furA2; Transcriptional regulator FurA K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D YIM_11165 iclR2; Acetate operon repressor K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D YIM_26460 kdgR4; Pectin degradation repressor protein KdgR K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D YIM_30450 yiaJ1; HTH-type transcriptional regulator YiaJ K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D YIM_10405 pcaR1; Pca regulon regulatory protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D YIM_15265 pcaR2; Pca regulon regulatory protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D YIM_26535 kdgR5; Pectin degradation repressor protein KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D YIM_02205 crp2; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D YIM_01340 crp1; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D YIM_46130 DNA-binding transcriptional dual regulator Crp K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
D YIM_16075 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D YIM_37840 arsC3; Arsenate-mycothiol transferase ArsC2 K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4]
D YIM_28090 nmtR; HTH-type transcriptional regulator NmtR K21886 nmtR; ArsR family transcriptional regulator, nickel/cobalt-responsive transcriptional repressor
D YIM_33225 cadC; Cadmium resistance transcriptional regulatory protein CadC K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D YIM_35600 hypothetical protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D YIM_38100 smtB; HTH-type transcriptional repressor SmtB K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D YIM_09415 anaerobic benzoate catabolism transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D YIM_35750 clgR1; Transcriptional regulator ClgR K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D YIM_15050 Transcriptional regulator PadR-like family protein K10947 K10947; PadR family transcriptional regulator
D YIM_11045 Transcriptional regulator PadR-like family protein K10947 K10947; PadR family transcriptional regulator
D YIM_34575 lineage-specific thermal regulator protein K10947 K10947; PadR family transcriptional regulator
D YIM_42460 lineage-specific thermal regulator protein K10947 K10947; PadR family transcriptional regulator
D YIM_15430 lineage-specific thermal regulator protein K10947 K10947; PadR family transcriptional regulator
D YIM_08660 Transcriptional regulator PadR-like family protein K10947 K10947; PadR family transcriptional regulator
D YIM_39235 lineage-specific thermal regulator protein K10947 K10947; PadR family transcriptional regulator
D YIM_13775 ideR2; Iron-dependent repressor IdeR K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D YIM_04085 ideR1; Iron-dependent repressor IdeR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D YIM_35245 blaI2; Transcriptional regulator BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D YIM_22935 blaI1; Transcriptional regulator BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D YIM_42835 birA7; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D YIM_15195 algB; Alginate biosynthesis transcriptional regulatory protein AlgB K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D YIM_45310 rex; Redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D YIM_11460 espR1; Nucleoid-associated protein EspR K27097 espR; ESX-1-secreted protein regulator
D YIM_40050 espR3; Nucleoid-associated protein EspR K27097 espR; ESX-1-secreted protein regulator
D YIM_26330 espR2; Nucleoid-associated protein EspR K27097 espR; ESX-1-secreted protein regulator
D YIM_41240 Helix-turn-helix protein K07727 K07727; putative transcriptional regulator
D YIM_03955 Helix-turn-helix protein K07729 K07729; putative transcriptional regulator
D YIM_35565 anaerobic benzoate catabolism transcriptional regulator K07729 K07729; putative transcriptional regulator
D YIM_39840 whiB7; putative transcriptional regulator WhiB3 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D YIM_43790 whiB8; putative transcriptional regulator WhiB3 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D YIM_05450 whmD; Transcriptional regulator WhiB2 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D YIM_18900 whiB4; Transcriptional regulator WhiB1 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D YIM_05645 whiB2; Transcriptional regulator WhiB1 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D YIM_02145 whiB1; Transcriptional regulator WhiB4 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D YIM_21635 whiB5; Transcriptional regulator WhiB1 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D YIM_32145 whiB6; Transcriptional regulator WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D YIM_06680 whiB3; putative transcriptional regulator WhiB7 K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D YIM_06860 csoR1; Copper-sensing transcriptional repressor CsoR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D YIM_22570 csoR2; Copper-sensing transcriptional repressor CsoR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D YIM_38240 pucR6; Purine catabolism regulatory protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D YIM_22980 pucR3; Purine catabolism regulatory protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D YIM_16615 afsR19; Regulatory protein AfsR K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon
D YIM_23290 embR3; Transcriptional regulatory protein EmbR K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon
D YIM_46165 embR7; Transcriptional regulatory protein EmbR K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon
D YIM_08670 moaR1; Transcriptional regulatory protein MoaR1 K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon
D YIM_40355 embR4; Transcriptional regulatory protein EmbR K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon
D YIM_41065 embR6; Transcriptional regulatory protein EmbR K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon
D YIM_48255 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YIM_02855 carD; RNA polymerase-binding transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D YIM_31470 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D YIM_38225 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D YIM_00930 tenA; Thiaminase-2 K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D YIM_40070 paaX4; Transcriptional repressor PaaX K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D YIM_23915 paaX3; Transcriptional repressor PaaX K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D YIM_19980 paaX1; Transcriptional repressor PaaX K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D YIM_21160 paaX2; Transcriptional repressor PaaX K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D YIM_03410 DNA-binding transcriptional activator PspC K03973 pspC; phage shock protein C
D YIM_17820 pyrR; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D YIM_16725 paiB; Protease synthase and sporulation protein PAI 2 K07734 paiB; transcriptional regulator
D YIM_48110 hypothetical protein K07735 algH; putative transcriptional regulator
D YIM_13625 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D YIM_35655 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:amyy03021]
D YIM_03445 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D YIM_44105 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D YIM_44455 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D YIM_44450 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D YIM_17865 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D YIM_21700 sigA1; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D YIM_31250 sigA2; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D YIM_14600 sigB; RNA polymerase sigma factor SigB K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D YIM_48215 sigM3; ECF RNA polymerase sigma factor SigM K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_15165 sigG3; ECF RNA polymerase sigma factor SigG K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_41980 sigJ9; ECF RNA polymerase sigma factor SigJ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_19915 sigI4; putative ECF RNA polymerase sigma factor SigI K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_24795 sigW; ECF RNA polymerase sigma factor SigW K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_30840 rpoE3; ECF RNA polymerase sigma-E factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_20375 rpoE2; ECF RNA polymerase sigma-E factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_05625 sigH; ECF RNA polymerase sigma factor SigH K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_38015 sigJ8; ECF RNA polymerase sigma factor SigJ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_43770 sigD4; ECF RNA polymerase sigma factor SigD K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_12940 sigG1; ECF RNA polymerase sigma factor SigG K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_17750 sigL2; ECF RNA polymerase sigma factor SigL K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_02985 sigC; ECF RNA polymerase sigma factor SigC K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_08675 sigD1; ECF RNA polymerase sigma factor SigD K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_10320 sigD2; ECF RNA polymerase sigma factor SigD K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_13945 sigK1; ECF RNA polymerase sigma factor SigK K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_24860 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_28110 sigL4; ECF RNA polymerase sigma factor SigL K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_41885 sigL7; ECF RNA polymerase sigma factor SigL K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_37445 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_22380 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_45355 sigX; RNA polymerase sigma factor SigX K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_30530 sigI7; putative ECF RNA polymerase sigma factor SigI K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_34160 sigJ5; ECF RNA polymerase sigma factor SigJ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_42405 sigE9; ECF RNA polymerase sigma factor SigE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_19450 sigE5; ECF RNA polymerase sigma factor SigE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_35135 sigL6; ECF RNA polymerase sigma factor SigL K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_45050 cnrH; RNA polymerase sigma factor CnrH K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_16125 sigJ2; ECF RNA polymerase sigma factor SigJ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_12420 sigJ1; ECF RNA polymerase sigma factor SigJ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YIM_01455 sigF1; RNA polymerase sigma factor SigF K03090 sigB; RNA polymerase sigma-B factor
D YIM_19565 sigF2; RNA polymerase sigma factor SigF K03090 sigB; RNA polymerase sigma-B factor
D YIM_11395 sigD3; RNA polymerase sigma-D factor K02405 fliA; RNA polymerase sigma factor FliA
D YIM_36020 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA
D YIM_17810 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D YIM_44550 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D YIM_07120 rsbT1; Serine/threonine-protein kinase RsbT K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D YIM_07115 rsbS; RsbT antagonist protein RsbS K17762 rsbS; rsbT antagonist protein RsbS
D YIM_07110 rsbRA; RsbT co-antagonist protein RsbRA K17763 rsbR; rsbT co-antagonist protein RsbR
D YIM_07130 Stage II sporulation protein E (SpoIIE) K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D YIM_12620 rsbU1; Phosphoserine phosphatase RsbU K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D YIM_34055 rsbV5; Anti-sigma-B factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D YIM_18595 rsfA3; Anti-sigma-F factor antagonist RsfA K04749 rsbV; anti-sigma B factor antagonist
D YIM_18770 rsfA4; Anti-sigma-F factor antagonist RsfA K04749 rsbV; anti-sigma B factor antagonist
D YIM_18970 rsfB6; Anti-sigma-F factor antagonist RsfB K04749 rsbV; anti-sigma B factor antagonist
D YIM_09780 hypothetical protein K04749 rsbV; anti-sigma B factor antagonist
D YIM_18590 rsfB4; Anti-sigma-F factor antagonist RsfB K04749 rsbV; anti-sigma B factor antagonist
D YIM_15810 rsfB3; Anti-sigma-F factor antagonist RsfB K04749 rsbV; anti-sigma B factor antagonist
D YIM_07155 Putative anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D YIM_07160 rsfB1; Anti-sigma-F factor antagonist RsfB K04749 rsbV; anti-sigma B factor antagonist
D YIM_08000 rsfB2; Anti-sigma-F factor antagonist RsfB K04749 rsbV; anti-sigma B factor antagonist
D YIM_32730 rsbV4; Anti-sigma-B factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D YIM_39695 rsfB7; Anti-sigma-F factor antagonist RsfB K04749 rsbV; anti-sigma B factor antagonist
D YIM_41265 rsbW4; Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D YIM_01460 rsbW1; Anti-sigma-F factor RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D YIM_23860 rsbW3; Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D YIM_19570 rsbW2; Anti-sigma-F factor RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D YIM_41520 serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D YIM_05070 greA2; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D YIM_23360 greA3; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D YIM_01660 greA1; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D YIM_43225 hypothetical protein K03628 rho; transcription termination factor Rho
D YIM_06295 hypothetical protein K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:amyy03019]
D YIM_38605 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D YIM_11035 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D YIM_35820 Putative ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D YIM_11015 Guanyl-specific ribonuclease St K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D YIM_38380 rnaSA; Guanyl-specific ribonuclease Sa K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D YIM_08930 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D YIM_38540 recQ2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D YIM_35330 recQ1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D YIM_04820 eno1; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YIM_33545 eno2; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YIM_35910 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D YIM_43225 hypothetical protein K03628 rho; transcription termination factor Rho
D YIM_06295 hypothetical protein K03628 rho; transcription termination factor Rho
D YIM_46980 dnaK5; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D YIM_37270 groEL2; 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YIM_43805 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YIM_03405 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YIM_10175 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D YIM_48175 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D YIM_37320 rraA; Putative regulator of ribonuclease activity K02553 rraA; regulator of ribonuclease activity A
D YIM_17960 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ
D YIM_27215 ski2-like helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D YIM_10690 hrpB2; ATP-dependent RNA helicase HrpB K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D YIM_06970 hrpB1; ATP-dependent RNA helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:amyy03011]
D YIM_31995 hypothetical protein K02945 RP-S1; small subunit ribosomal protein S1
D YIM_11405 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D YIM_44230 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D YIM_44110 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D YIM_44175 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D YIM_47915 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D YIM_44280 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D YIM_44190 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D YIM_43995 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D YIM_44265 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D YIM_44115 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D YIM_44285 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D YIM_44125 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D YIM_44195 rpsZ; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D YIM_27845 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D YIM_35915 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D YIM_11330 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D YIM_44215 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D YIM_47925 rpsR2; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18
D YIM_27850 rpsR1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18
D YIM_44240 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D YIM_38470 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D YIM_44540 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D YIM_44245 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D YIM_44260 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D YIM_44255 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D YIM_44200 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D YIM_44185 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D YIM_47930 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D YIM_44520 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D YIM_44545 rplK2; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D YIM_02545 rplK1; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D YIM_44515 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D YIM_44000 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D YIM_44210 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D YIM_44165 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D YIM_44225 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D YIM_44100 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D YIM_44180 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D YIM_11350 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D YIM_31525 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D YIM_38600 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D YIM_44235 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D YIM_44250 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D YIM_44205 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D YIM_38595 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D YIM_10250 rpmB1; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D YIM_27835 rpmB2; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D YIM_44220 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D YIM_44170 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D YIM_06305 rpmE1; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D YIM_27825 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D YIM_11030 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D YIM_27820 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D YIM_44605 rpmG2; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D YIM_27840 rpmG1; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D YIM_48290 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D YIM_31530 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D YIM_44130 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D YIM_33380 ykgO; 50S ribosomal protein L36 2 K02919 RP-L36; large subunit ribosomal protein L36
D YIM_04710 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D YIM_12100 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YIM_31420 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YIM_06625 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YIM_10970 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YIM_10960 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YIM_12090 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YIM_31430 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YIM_06615 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YIM_10965 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YIM_12095 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YIM_31425 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YIM_06620 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:amyy03009]
D YIM_11035 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D YIM_11840 RIO1 family protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D YIM_08930 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D YIM_38180 era; GTPase Era K03595 era; GTPase
D YIM_38590 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-]
D YIM_36020 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA
D YIM_17810 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D YIM_44550 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D YIM_04670 rsmA1; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D YIM_17905 rsmB; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D YIM_11005 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D YIM_38215 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D YIM_48265 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D YIM_35650 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D YIM_04610 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D YIM_31400 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D YIM_11275 rlmAII; 23S rRNA (guanine(748)-N(1))-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D YIM_05580 Putative TrmH family tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D YIM_02830 Putative TrmH family tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D YIM_11445 rlmN; putative dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D YIM_18630 rluA; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D YIM_31330 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D YIM_14045 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D YIM_08965 ermD; rRNA adenine N-6-methyltransferase K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D YIM_43830 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D YIM_04455 ydaF2; Putative ribosomal N-acetyltransferase YdaF K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D YIM_04905 ydaF3; Putative ribosomal N-acetyltransferase YdaF K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D YIM_25400 ydaF4; Putative ribosomal N-acetyltransferase YdaF K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D YIM_11340 rimM; Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D YIM_35765 rimO2; Ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D YIM_38605 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D YIM_17645 yrrK; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D YIM_05605 rsgA1; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D YIM_07900 rsgA2; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D YIM_31300 der; GTPase Der K03977 engA; GTPase
D YIM_13600 hflX; GTPase HflX K03665 hflX; GTPase
D YIM_06340 ywlC1; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D YIM_17460 relA1; Bifunctional (p)ppGpp synthase/hydrolase relA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D YIM_36000 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D YIM_36025 rimP; Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D YIM_38530 rsfS; Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D YIM_38200 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D YIM_05310 ychF; Ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase
D YIM_11025 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:amyy03016]
D YIM_11015 Guanyl-specific ribonuclease St K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D YIM_38380 rnaSA; Guanyl-specific ribonuclease Sa K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D YIM_02070 rtcB; RNA-splicing ligase RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D YIM_09720 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YIM_11875 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D YIM_14000 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D YIM_48095 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D YIM_04655 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D YIM_38880 argS2; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YIM_06270 argS1; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YIM_41765 lysX2; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D YIM_02685 lysX1; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D YIM_17575 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D YIM_17640 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D YIM_38085 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D YIM_17315 thrS1; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D YIM_37460 thrS2; Threonine--tRNA ligase 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D YIM_00995 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D YIM_38745 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D YIM_43155 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D YIM_28300 pheS1; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D YIM_31515 pheS2; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D YIM_31510 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D YIM_31435 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D YIM_43405 trpS2; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D YIM_05380 trpS1; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D YIM_14605 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D YIM_38210 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D YIM_02510 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D YIM_27340 trmI; tRNA (adenine(58)-N(1))-methyltransferase TrmI K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D YIM_47465 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D YIM_44095 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D YIM_35935 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D YIM_09525 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YIM_06340 ywlC1; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D YIM_13205 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D YIM_36855 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D YIM_41860 rnpA; Bacterial RNase P class A K01978 rnpB; M1 RNA
D YIM_41605 rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D YIM_31035 rnd; Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D YIM_35920 2',5' RNA ligase family K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D YIM_12605 RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D YIM_08345 asnS; Asparagine--tRNA ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D YIM_05620 ybaK1; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D YIM_01735 tadA1; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D YIM_13180 miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D YIM_11345 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D YIM_27575 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D YIM_31520 aviRb; 23S rRNA (uridine(2479)-2'-O)-methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D YIM_18630 rluA; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D YIM_09530 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D YIM_10345 Iron-sulfur cluster biosynthesis K13628 iscA; iron-sulfur cluster assembly protein
D YIM_46330 gcvT3; Aminomethyltransferase K06980 ygfZ; tRNA-modifying protein YgfZ
D YIM_02595 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D YIM_43835 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D YIM_43825 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D YIM_43880 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D YIM_35910 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:amyy03012]
D YIM_36010 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D YIM_31535 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D YIM_11410 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D YIM_44270 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D YIM_44275 fusA2; Elongation factor G K02355 fusA; elongation factor G
D YIM_17355 fusA1; Elongation factor G K02355 fusA; elongation factor G
D YIM_06310 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D YIM_11420 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor
D YIM_06335 prmC1; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D YIM_12850 Methyltransferase small domain protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D YIM_24890 prmB; 50S ribosomal protein L3 glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D YIM_33485 prmC2; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D YIM_04705 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D YIM_44135 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D YIM_17805 efp; Elongation factor P K02356 efp; elongation factor P
D YIM_06765 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D YIM_46430 arfB; Peptidyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:amyy03110]
D YIM_46945 clpB2; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D YIM_02705 clpC2; ATP-dependent Clp protease ATP-binding subunit ClpC1 K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D YIM_26620 clpX1; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D YIM_38805 clpX2; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D YIM_39405 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D YIM_46980 dnaK5; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D YIM_38845 dnaK2; Chaperone protein DnaK K04044 hscA; molecular chaperone HscA
D YIM_37270 groEL2; 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YIM_43805 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YIM_03405 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YIM_38220 dnaJ3; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D YIM_46970 dnaJ4; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D YIM_29830 cbpA; Curved DNA-binding protein K03686 dnaJ; molecular chaperone DnaJ
D YIM_46975 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D YIM_47420 grpE; Protein GrpE K03687 GRPE; molecular chaperone GrpE
D YIM_14835 18 kDa heat shock protein K13993 HSP20; HSP20 family protein
D YIM_23550 18 kDa heat shock protein K13993 HSP20; HSP20 family protein
D YIM_29840 18 kDa heat shock protein K13993 HSP20; HSP20 family protein
D YIM_15300 hslR; Heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D YIM_43810 groS1; 10 kDa chaperonin K04078 groES; chaperonin GroES
D YIM_47175 groS2; 10 kDa chaperonin 1 K04078 groES; chaperonin GroES
D YIM_42395 degP2; Periplasmic serine endoprotease DegP precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D YIM_02625 ftsH1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D YIM_06370 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D YIM_44055 apr6; Subtilisin DY K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D YIM_12500 Thermophilic serine proteinase precursor K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D YIM_29735 apr3; Subtilisin DY K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D YIM_38420 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D YIM_04580 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D YIM_31605 exo_I; Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D YIM_00125 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D YIM_17470 cypB; Peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D YIM_08630 ppiB; putative peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D YIM_41375 trxA2; Thioredoxin K03671 TXN; thioredoxin
D YIM_48230 trxA4; Thioredoxin K03671 TXN; thioredoxin
D YIM_09125 trxA1; Thioredoxin K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:amyy04131]
D YIM_38650 ndkA; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D YIM_12945 SPFH domain / Band 7 family protein K07192 FLOT; flotillin
D YIM_00830 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D YIM_14110 arsA2; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D YIM_18025 gapA; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D YIM_45450 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YIM_14190 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YIM_39405 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D YIM_24985 Vacuole effluxer Atg22 like protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:amyy04121]
D YIM_27285 pup; Prokaryotic ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:amyy03051]
D YIM_39405 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D YIM_27275 prcA2; Proteasome subunit alpha 2 K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D YIM_27280 prcB1; Proteasome subunit beta 1 precursor K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D YIM_27325 arc; Proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase
D YIM_27265 pafA; Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D YIM_27250 hypothetical protein K13572 pafB; proteasome accessory factor B
D YIM_27245 hypothetical protein K13573 pafC; proteasome accessory factor C
D YIM_27290 dop; Pup deamidase/depupylase K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:amyy03032]
D YIM_36305 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D YIM_44775 ydiP2; putative BsuMI modification methylase subunit YdiP K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YIM_01545 aplIM1; Modification methylase AplI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YIM_07770 ydiP1; putative BsuMI modification methylase subunit YdiP K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YIM_21710 aplIM2; Modification methylase AplI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YIM_10160 hypothetical protein K03530 hupB; DNA-binding protein HU-beta
D YIM_00005 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D YIM_47955 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D YIM_38010 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D YIM_39120 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D YIM_47920 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D YIM_41435 dnaE3; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YIM_12125 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YIM_00015 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YIM_00785 bmrR1; Multidrug-efflux transporter 1 regulator K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YIM_38480 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YIM_02440 dnaX2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YIM_12370 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YIM_27090 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YIM_01940 dnaX1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YIM_42000 pspA4; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D YIM_11360 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D YIM_32060 polA3; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YIM_09575 ligA1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YIM_21010 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YIM_40640 gyrA2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D YIM_00040 gyrA1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D YIM_40645 gyrB2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D YIM_00035 gyrB1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D YIM_02425 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:amyy03036]
D YIM_44775 ydiP2; putative BsuMI modification methylase subunit YdiP K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YIM_01545 aplIM1; Modification methylase AplI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YIM_07770 ydiP1; putative BsuMI modification methylase subunit YdiP K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YIM_21710 aplIM2; Modification methylase AplI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YIM_11035 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D YIM_12945 SPFH domain / Band 7 family protein K07192 FLOT; flotillin
D YIM_07805 lsr2; Nucleoid-associated protein Lsr2 K26249 lsr2; nucleoid-associated protein Lsr2
D YIM_36185 lsr4; Nucleoid-associated protein Lsr2 K26249 lsr2; nucleoid-associated protein Lsr2
D YIM_02690 lsr1; Nucleoid-associated protein Lsr2 K26249 lsr2; nucleoid-associated protein Lsr2
D YIM_10160 hypothetical protein K03530 hupB; DNA-binding protein HU-beta
D YIM_00005 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D YIM_02110 dps; DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein
D YIM_28705 putative HTH-type transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D YIM_45205 lrp6; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YIM_47035 lrpC4; HTH-type transcriptional regulator LrpC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YIM_24565 lrpC2; HTH-type transcriptional regulator LrpC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YIM_27170 lrp2; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YIM_09540 asnC3; Regulatory protein AsnC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YIM_11115 smc4; Chromosome partition protein Smc K03529 smc; chromosome segregation protein
D YIM_31340 scpA3; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D YIM_31335 hypothetical protein K06024 scpB; segregation and condensation protein B
D YIM_06770 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D YIM_35640 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D YIM_38925 ftsK1; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D YIM_45730 ftsK2; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D YIM_44765 FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D YIM_02475 FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D YIM_35795 spoIIIE; DNA translocase SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D YIM_34695 eccCa5; ESX-1 secretion system protein EccCa1 K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D YIM_21620 FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D YIM_32160 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D YIM_13910 ftsQ; Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D YIM_13895 ftsW2; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D YIM_06775 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D YIM_13955 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D YIM_30830 AFG1-like ATPase K06916 zapE; cell division protein ZapE
D YIM_48235 lytC; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YIM_01955 cwlD; Germination-specific N-acetylmuramoyl-L-alanine amidase precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YIM_13970 sepF; Cell division protein SepF K09772 sepF; cell division inhibitor SepF
D YIM_48260 soj4; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D YIM_27360 soj1; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D YIM_31350 soj2; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D YIM_35710 soj3; Chromosome-partitioning ATPase Soj K03496 parA; chromosome partitioning protein
D YIM_48255 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YIM_48265 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D YIM_11390 xerC2; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D YIM_24940 xerC4; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D YIM_24590 xerC3; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D YIM_31355 xerD2; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D YIM_42385 ylxH; Flagellum site-determining protein YlxH K03593 mrp; ATP-binding protein involved in chromosome partitioning
D YIM_17970 whiA; Putative sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:amyy03400]
D YIM_41640 ogt4; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D YIM_18440 ogt3; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D YIM_08515 ogt1; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D YIM_08525 ogt2; Methylated-DNA--protein-cysteine methyltransferase, constitutive K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D YIM_03935 phrA; Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D YIM_10245 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D YIM_31440 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D YIM_02755 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D YIM_02215 pdg; Ultraviolet N-glycosylase/AP lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D YIM_03445 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D YIM_05375 nudG1; CTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D YIM_29645 Bifunctional NMN adenylyltransferase/Nudix hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D YIM_14125 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D YIM_42290 Bifunctional NMN adenylyltransferase/Nudix hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D YIM_47775 nudJ; Phosphatase NudJ K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D YIM_08165 bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D YIM_20155 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D YIM_31610 mutT1; Putative mutator protein MutT4 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D YIM_24575 nudG2; CTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D YIM_28525 nudG3; CTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D YIM_31220 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D YIM_47140 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D YIM_04890 Uracil DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D YIM_14910 Uracil DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D YIM_47790 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D YIM_08970 alkA2; DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D YIM_05305 alkA1; DNA-3-methyladenine glycosylase 2 K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D YIM_18435 adaA; Bifunctional transcriptional activator/DNA repair enzyme AdaA K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D YIM_42440 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D YIM_00660 fpg1; putative formamidopyrimidine-DNA glycosylase-like protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D YIM_11040 fpg2; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D YIM_35715 nei1; Endonuclease 8 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D YIM_39015 nei2; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D YIM_43440 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D YIM_17945 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D YIM_47895 end; putative endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D YIM_31915 nfi; Endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D YIM_09575 ligA1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YIM_21010 ligA2; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YIM_32060 polA3; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YIM_31660 uvrA6; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D YIM_31895 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D YIM_17955 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D YIM_42095 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YIM_43640 uvrD2; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YIM_06670 uvrD1; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YIM_37090 yjcD2; Putative ATP-dependent DNA helicase YjcD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YIM_44455 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D YIM_44450 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D YIM_44105 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D YIM_17865 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D YIM_04770 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D YIM_05265 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D YIM_05255 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D YIM_41435 dnaE3; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YIM_12125 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YIM_00015 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YIM_00785 bmrR1; Multidrug-efflux transporter 1 regulator K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YIM_38480 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YIM_02440 dnaX2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YIM_12370 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YIM_27090 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YIM_01940 dnaX1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YIM_39120 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D YIM_47920 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D YIM_01550 vsr; Very short patch repair protein K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D YIM_40455 recD5; ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D YIM_13090 DNA recombination protein RecA K03553 recA; recombination protein RecA
D YIM_17430 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D YIM_17435 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D YIM_17425 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D YIM_17880 priA2; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D YIM_05300 sbcC; Nuclease SbcCD subunit C K03546 sbcC; DNA repair protein SbcC/Rad50
D YIM_05295 sbcD; Nuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D YIM_02865 hypothetical protein K04485 radA; DNA repair protein RadA/Sms
D YIM_00025 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D YIM_47250 Divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D YIM_10260 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D YIM_38145 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D YIM_01965 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D YIM_31390 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D YIM_08935 AAA-like domain protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D YIM_01440 ykoV1; putative DNA repair protein YkoV K10979 ku; DNA end-binding protein Ku
D YIM_11305 ykoV2; putative DNA repair protein YkoV K10979 ku; DNA end-binding protein Ku
D YIM_28210 ykoV3; putative DNA repair protein YkoV K10979 ku; DNA end-binding protein Ku
D YIM_41420 Putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D YIM_01445 ykoU1; putative ATP-dependent DNA ligase YkoU K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D YIM_14985 Putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D YIM_18555 Putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D YIM_31710 ykoU2; putative ATP-dependent DNA ligase YkoU K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D YIM_40640 gyrA2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D YIM_00040 gyrA1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D YIM_40645 gyrB2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D YIM_00035 gyrB1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D YIM_02425 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D YIM_10160 hypothetical protein K03530 hupB; DNA-binding protein HU-beta
D YIM_47580 recombination and repair protein RecT K07455 recT; recombination protein RecT
D YIM_38540 recQ2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D YIM_35330 recQ1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D YIM_40735 dinB3; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D YIM_28260 dinB1; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D YIM_35700 dinB2; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D YIM_13610 lexA1; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D YIM_25845 lexA2; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D YIM_43570 DNA polymerase IV K14161 imuB; protein ImuB
D YIM_43560 dnaE4; Error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D YIM_34090 dnaE2; Error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D YIM_13095 recX; Regulatory protein RecX K03565 recX; regulatory protein
D YIM_41720 hypothetical protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D YIM_13070 putative ATP-dependent helicase Lhr K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D YIM_10170 RNA pyrophosphohydrolase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D YIM_31365 nudF3; ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D YIM_00730 nudF1; ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D YIM_06460 nudF2; ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D YIM_13630 nrdJ; Vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YIM_18325 nrdA; Ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YIM_42715 nrdB3; R2-like ligand binding oxidase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YIM_18320 nrdB2; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YIM_03610 nrdB1; R2-like ligand binding oxidase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YIM_35975 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:amyy03029]
D YIM_36010 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D YIM_31535 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D YIM_11410 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D YIM_44270 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D YIM_44275 fusA2; Elongation factor G K02355 fusA; elongation factor G
D YIM_17355 fusA1; Elongation factor G K02355 fusA; elongation factor G
D YIM_38180 era; GTPase Era K03595 era; GTPase
D YIM_31435 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D YIM_48095 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D YIM_17575 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D YIM_38085 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D YIM_38880 argS2; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YIM_06270 argS1; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YIM_09595 gatA1; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D YIM_06010 aam2; Acylamidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D YIM_00315 aam1; Acylamidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D YIM_38425 gatA4; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D YIM_09605 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D YIM_09590 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D YIM_39120 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D YIM_47920 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D YIM_46980 dnaK5; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D YIM_46975 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D YIM_47420 grpE; Protein GrpE K03687 GRPE; molecular chaperone GrpE
D YIM_37270 groEL2; 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YIM_43805 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YIM_03405 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YIM_43810 groS1; 10 kDa chaperonin K04078 groES; chaperonin GroES
D YIM_47175 groS2; 10 kDa chaperonin 1 K04078 groES; chaperonin GroES
D YIM_38220 dnaJ3; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D YIM_46970 dnaJ4; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D YIM_29830 cbpA; Curved DNA-binding protein K03686 dnaJ; molecular chaperone DnaJ
D YIM_09525 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YIM_42385 ylxH; Flagellum site-determining protein YlxH K03593 mrp; ATP-binding protein involved in chromosome partitioning
D YIM_18085 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D YIM_18125 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D YIM_43105 yidC1; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YIM_48285 yidC2; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YIM_39405 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:amyy02000]
D YIM_34650 irtA; Iron import ATP-binding/permease protein IrtA K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D YIM_34655 irtB; Iron import ATP-binding/permease protein IrtB K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D YIM_29240 msbA1; Lipid A export ATP-binding/permease protein MsbA K24910 ramA; ATP-binding cassette, subfamily B, bacterial RamA/AmfB
D YIM_45900 putative ABC transporter ATP-binding protein K24910 ramA; ATP-binding cassette, subfamily B, bacterial RamA/AmfB
D YIM_29235 Putative multidrug export ATP-binding/permease protein K24911 ramB; ATP-binding cassette, subfamily B, bacterial RamB/AmfA
D YIM_45895 mdlB3; Multidrug resistance-like ATP-binding protein MdlB K24911 ramB; ATP-binding cassette, subfamily B, bacterial RamB/AmfA
D YIM_20135 putative ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D YIM_39610 Putative multidrug export ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D YIM_20130 putative ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D YIM_39615 putative ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D YIM_47260 msbA3; Lipid A export ATP-binding/permease protein MsbA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D YIM_05760 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D YIM_04105 yheI1; putative multidrug resistance ABC transporter ATP-binding/permease protein YheI K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D YIM_37680 msbA2; Lipid A export ATP-binding/permease protein MsbA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D YIM_42480 putative ABC transporter ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D YIM_42475 cydD2; ATP-binding/permease protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D YIM_00850 cydD1; ATP-binding/permease protein CydD K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD
D YIM_16645 yjjK; putative ABC transporter ATP-binding protein YjjK K18230 tylC; macrolide transport system ATP-binding/permease protein
D YIM_27455 putative ABC transporter ATP-binding protein K18230 tylC; macrolide transport system ATP-binding/permease protein
D YIM_27460 putative ABC transporter ATP-binding protein K18230 tylC; macrolide transport system ATP-binding/permease protein
D YIM_31265 yheS2; putative ABC transporter ATP-binding protein YheS K18230 tylC; macrolide transport system ATP-binding/permease protein
D YIM_04685 putative ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D YIM_40195 Putative multidrug export ATP-binding/permease protein K02021 ABC.MR; putative ABC transport system ATP-binding protein
D YIM_15005 modA; Molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein
D YIM_15000 modB; Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D YIM_14995 ugpC1; sn-glycerol-3-phosphate import ATP-binding protein UgpC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D YIM_08475 ssuA1; Putative aliphatic sulfonates-binding protein precursor K15553 ssuA; sulfonate transport system substrate-binding protein
D YIM_12315 NMT1/THI5 like protein K15553 ssuA; sulfonate transport system substrate-binding protein
D YIM_08485 ssuC1; Putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein
D YIM_12310 ssuC3; Putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein
D YIM_08480 ssuB1; Aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D YIM_12305 tauB; Taurine import ATP-binding protein TauB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D YIM_23445 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D YIM_23440 potH; Putrescine transport system permease protein PotH K02011 afuB; iron(III) transport system permease protein
D YIM_23435 malK; Maltose/maltodextrin import ATP-binding protein MalK K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D YIM_05335 thiB; Thiamine-binding periplasmic protein precursor K02064 thiB; thiamine transport system substrate-binding protein
D YIM_05340 phnV; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02063 thiP; thiamine transport system permease protein
D YIM_05345 potA; Spermidine/putrescine import ATP-binding protein PotA K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D YIM_45520 opuBC; Choline-binding protein precursor K05845 opuC; osmoprotectant transport system substrate-binding protein
D YIM_00465 osmF; Putative osmoprotectant uptake system substrate-binding protein OsmF precursor K05845 opuC; osmoprotectant transport system substrate-binding protein
D YIM_05705 opuCC; Glycine betaine/carnitine/choline-binding protein OpuCC precursor K05845 opuC; osmoprotectant transport system substrate-binding protein
D YIM_45525 opuCD2; Glycine betaine/carnitine/choline transport system permease protein OpuCD K05846 opuBD; osmoprotectant transport system permease protein
D YIM_45530 opuBB; Choline transport system permease protein OpuBB K05846 opuBD; osmoprotectant transport system permease protein
D YIM_00460 opuCB2; Glycine betaine/carnitine/choline transport system permease protein OpuCB K05846 opuBD; osmoprotectant transport system permease protein
D YIM_05695 opuCD1; Glycine betaine/carnitine/choline transport system permease protein OpuCD K05846 opuBD; osmoprotectant transport system permease protein
D YIM_05700 opuCB3; Glycine betaine/carnitine/choline transport system permease protein OpuCB K05846 opuBD; osmoprotectant transport system permease protein
D YIM_00450 opuCB1; Carnitine transport permease protein OpuCB K05846 opuBD; osmoprotectant transport system permease protein
D YIM_05690 opuCA2; Carnitine transport ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D YIM_00455 opuCA1; Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D YIM_10770 Putative thiamine biosynthesis protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D YIM_03455 NMT1/THI5 like protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D YIM_12730 ssuA2; Putative aliphatic sulfonates-binding protein precursor K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D YIM_32530 tauA; Taurine-binding periplasmic protein precursor K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D YIM_10765 ssuC2; Putative aliphatic sulfonates transport permease protein SsuC K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D YIM_12735 cmpB; Bicarbonate transport system permease protein CmpB K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D YIM_32540 ssuC5; Putative aliphatic sulfonates transport permease protein SsuC K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D YIM_10775 cmpD1; Bicarbonate transport ATP-binding protein CmpD K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D YIM_12745 cmpD2; Bicarbonate transport ATP-binding protein CmpD K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D YIM_32535 cmpD3; Bicarbonate transport ATP-binding protein CmpD K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D YIM_42330 sugC2; Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YIM_43895 sugC3; Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YIM_21415 ugpC3; sn-glycerol-3-phosphate import ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YIM_24205 sugC1; Trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YIM_28045 ugpC4; sn-glycerol-3-phosphate import ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YIM_19800 ugpC2; sn-glycerol-3-phosphate import ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YIM_21285 msmE1; Multiple sugar-binding protein precursor K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D YIM_19715 Bacterial extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D YIM_20890 Bacterial extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D YIM_24190 Bacterial extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D YIM_21290 lacF5; Lactose transport system permease protein LacF K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D YIM_19720 lacF1; Lactose transport system permease protein LacF K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D YIM_24195 lacF8; Lactose transport system permease protein LacF K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D YIM_20885 lacF4; Lactose transport system permease protein LacF K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D YIM_21295 araQ3; L-arabinose transport system permease protein AraQ K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D YIM_19725 sugB1; Trehalose transport system permease protein SugB K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D YIM_20880 araQ2; L-arabinose transport system permease protein AraQ K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D YIM_24200 sugB3; Trehalose transport system permease protein SugB K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D YIM_28670 putative sugar-binding periplasmic protein precursor K10232 aglE; alpha-glucoside transport system substrate-binding protein
D YIM_42345 lpqY; Trehalose-binding lipoprotein LpqY precursor K10236 thuE; trehalose/maltose transport system substrate-binding protein
D YIM_42340 sugA2; Trehalose transport system permease protein SugA K10237 thuF; trehalose/maltose transport system permease protein
D YIM_42335 sugB5; Trehalose transport system permease protein SugB K10238 thuG; trehalose/maltose transport system permease protein
D YIM_41930 araN2; putative arabinose-binding protein precursor K10240 cebE; cellobiose transport system substrate-binding protein
D YIM_19820 araN1; putative arabinose-binding protein precursor K10240 cebE; cellobiose transport system substrate-binding protein
D YIM_41935 lacF11; Lactose transport system permease protein LacF K10241 cebF; cellobiose transport system permease protein
D YIM_19815 lacF2; Lactose transport system permease protein LacF K10241 cebF; cellobiose transport system permease protein
D YIM_41940 lacG3; Lactose transport system permease protein LacG K10242 cebG; cellobiose transport system permease protein
D YIM_19810 lacG1; Lactose transport system permease protein LacG K10242 cebG; cellobiose transport system permease protein
D YIM_31590 msmE2; Multiple sugar-binding protein precursor K17329 dasA; N,N'-diacetylchitobiose transport system substrate-binding protein
D YIM_31595 ycjO3; Inner membrane ABC transporter permease protein YcjO K17330 dasB; N,N'-diacetylchitobiose transport system permease protein
D YIM_31600 ycjP4; Inner membrane ABC transporter permease protein YcjP K17331 dasC; N,N'-diacetylchitobiose transport system permease protein
D YIM_19670 lipO; Lipoprotein LipO precursor K17318 lplA; putative aldouronate transport system substrate-binding protein
D YIM_19660 yteP; putative multiple-sugar transport system permease YteP K17319 lplB; putative aldouronate transport system permease protein
D YIM_19665 araQ1; L-arabinose transport system permease protein AraQ K17320 lplC; putative aldouronate transport system permease protein
D YIM_14670 xylF2; D-xylose-binding periplasmic protein precursor K10543 xylF; D-xylose transport system substrate-binding protein
D YIM_14680 xylH; Xylose transport system permease protein XylH K10544 xylH; D-xylose transport system permease protein
D YIM_14675 mglA2; Galactose/methyl galactoside import ATP-binding protein MglA K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D YIM_46890 rbsB6; D-ribose-binding periplasmic protein precursor K10552 frcB; fructose transport system substrate-binding protein
D YIM_46885 rbsC10; Ribose transport system permease protein RbsC K10553 frcC; fructose transport system permease protein
D YIM_46880 rbsA9; Ribose import ATP-binding protein RbsA K10554 frcA; fructose transport system ATP-binding protein
D YIM_06180 lsrB1; Autoinducer 2-binding protein LsrB precursor K10559 rhaS; rhamnose transport system substrate-binding protein
D YIM_06170 rbsC1; Ribose transport system permease protein RbsC K10560 rhaP; rhamnose transport system permease protein
D YIM_06175 lsrD; Autoinducer 2 import system permease protein LsrD K10561 rhaQ; rhamnose transport system permease protein
D YIM_06165 rbsA1; Ribose import ATP-binding protein RbsA K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-]
D YIM_31830 rbsB3; D-ribose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D YIM_39870 rbsB5; D-ribose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D YIM_44345 ytfQ3; ABC transporter periplasmic-binding protein YtfQ precursor K10439 rbsB; ribose transport system substrate-binding protein
D YIM_09085 rbsB1; D-ribose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D YIM_38705 rbsB4; D-ribose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D YIM_44350 rbsC9; Ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D YIM_09090 rbsC2; Ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D YIM_31835 rbsC5; Ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D YIM_38710 rbsC6; Ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D YIM_38715 rbsC7; Ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D YIM_38720 rbsA5; Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YIM_31840 rbsA4; Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YIM_44355 araG2; Arabinose import ATP-binding protein AraG K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YIM_06200 ytfQ1; ABC transporter periplasmic-binding protein YtfQ precursor K23508 ytfQ; galactofuranose transport system substrate-binding protein
D YIM_26560 ytfQ2; ABC transporter periplasmic-binding protein YtfQ precursor K23508 ytfQ; galactofuranose transport system substrate-binding protein
D YIM_06210 ytfT1; Inner membrane ABC transporter permease protein YtfT K23509 ytfT; galactofuranose transport system permease protein
D YIM_06215 yjfF1; Inner membrane ABC transporter permease protein YjfF K23509 ytfT; galactofuranose transport system permease protein
D YIM_26545 yjfF2; Inner membrane ABC transporter permease protein YjfF K23509 ytfT; galactofuranose transport system permease protein
D YIM_26550 ytfT2; Inner membrane ABC transporter permease protein YtfT K23509 ytfT; galactofuranose transport system permease protein
D YIM_06205 rbsA2; Ribose import ATP-binding protein RbsA K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D YIM_26555 rbsA3; Ribose import ATP-binding protein RbsA K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D YIM_40890 ugpB; sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D YIM_32700 yesO2; Putative ABC transporter substrate-binding protein YesO K25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein
D YIM_32690 lacF9; Lactose transport system permease protein LacF K25677 yesP; pectin-derived oligosaccharide transport system permease protein
D YIM_32695 araQ7; L-arabinose transport system permease protein AraQ K25678 yesQ; pectin-derived oligosaccharide transport system permease protein
D YIM_43285 tmpC2; Membrane lipoprotein TmpC precursor K07335 bmpA; basic membrane protein A and related proteins
D YIM_42945 tmpC1; Membrane lipoprotein TmpC precursor K07335 bmpA; basic membrane protein A and related proteins
D YIM_43275 Branched-chain amino acid transport system / permease component K23535 nupB; general nucleoside transport system permease protein
D YIM_42955 Branched-chain amino acid transport system / permease component K23535 nupB; general nucleoside transport system permease protein
D YIM_42960 Branched-chain amino acid transport system / permease component K23536 nupC; general nucleoside transport system permease protein
D YIM_43270 Branched-chain amino acid transport system / permease component K23536 nupC; general nucleoside transport system permease protein
D YIM_43280 rbsA8; Ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein
D YIM_42950 rbsA7; Ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein
D YIM_31775 hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D YIM_44470 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_44475 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_44485 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_44490 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_13840 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_13845 mlaD; putative phospholipid ABC transporter-binding protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_13855 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_13860 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_10920 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_10925 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_10935 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_10940 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_13835 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_13850 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_44480 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_10930 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_10945 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_44495 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YIM_44500 mlaE5; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YIM_44505 mlaE6; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YIM_13825 mlaE3; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YIM_13830 mlaE4; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YIM_10950 mlaE1; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YIM_10955 mlaE2; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YIM_44510 putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D YIM_45440 hypothetical protein K18481 mas; Mce-associated membrane protein
D YIM_44460 hypothetical protein K18481 mas; Mce-associated membrane protein
D YIM_44465 hypothetical protein K18481 mas; Mce-associated membrane protein
D YIM_13865 hypothetical protein K18481 mas; Mce-associated membrane protein
D YIM_13870 hypothetical protein K18481 mas; Mce-associated membrane protein
D YIM_10910 hypothetical protein K18481 mas; Mce-associated membrane protein
D YIM_10915 hypothetical protein K18481 mas; Mce-associated membrane protein
D YIM_43930 putative ABC transporter-binding protein precursor K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YIM_21425 Bacterial extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YIM_22650 lacE; Lactose-binding protein precursor K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YIM_28070 malX; Maltose/maltodextrin-binding protein precursor K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YIM_28590 Bacterial extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YIM_20060 mdxE1; Maltodextrin-binding protein MdxE precursor K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YIM_32570 Bacterial extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YIM_34975 msmE3; Multiple sugar-binding protein precursor K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YIM_37170 malE; Maltose-binding periplasmic protein precursor K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YIM_20690 yesO1; Putative ABC transporter substrate-binding protein YesO K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YIM_32565 ycjP5; Inner membrane ABC transporter permease protein YcjP K02025 ABC.MS.P; multiple sugar transport system permease protein
D YIM_21435 lacF6; Lactose transport system permease protein LacF K02025 ABC.MS.P; multiple sugar transport system permease protein
D YIM_22640 lacF7; Lactose transport system permease protein LacF K02025 ABC.MS.P; multiple sugar transport system permease protein
D YIM_23480 araP1; L-arabinose transport system permease protein AraP K02025 ABC.MS.P; multiple sugar transport system permease protein
D YIM_28065 araP2; L-arabinose transport system permease protein AraP K02025 ABC.MS.P; multiple sugar transport system permease protein
D YIM_28585 ycjO2; Inner membrane ABC transporter permease protein YcjO K02025 ABC.MS.P; multiple sugar transport system permease protein
D YIM_20065 lacF3; Lactose transport system permease protein LacF K02025 ABC.MS.P; multiple sugar transport system permease protein
D YIM_20680 ycjO1; Inner membrane ABC transporter permease protein YcjO K02025 ABC.MS.P; multiple sugar transport system permease protein
D YIM_34990 sugA1; Trehalose transport system permease protein SugA K02025 ABC.MS.P; multiple sugar transport system permease protein
D YIM_37165 lacF10; Lactose transport system permease protein LacF K02025 ABC.MS.P; multiple sugar transport system permease protein
D YIM_39945 araP3; L-arabinose transport system permease protein AraP K02025 ABC.MS.P; multiple sugar transport system permease protein
D YIM_43925 sugA3; Trehalose transport system permease protein SugA K02025 ABC.MS.P; multiple sugar transport system permease protein
D YIM_21430 ycjP2; Inner membrane ABC transporter permease protein YcjP K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YIM_22645 araQ4; L-arabinose transport system permease protein AraQ K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YIM_28060 araQ6; L-arabinose transport system permease protein AraQ K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YIM_28580 ycjP3; Inner membrane ABC transporter permease protein YcjP K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YIM_20070 sugB2; Trehalose transport system permease protein SugB K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YIM_20685 ycjP1; Inner membrane ABC transporter permease protein YcjP K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YIM_34985 ycjP6; Inner membrane ABC transporter permease protein YcjP K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YIM_37160 sugB4; Trehalose transport system permease protein SugB K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YIM_39940 lacG2; Lactose transport system permease protein LacG K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YIM_43920 sugB6; Trehalose transport system permease protein SugB K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YIM_10535 rbsB2; D-ribose-binding periplasmic protein precursor K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D YIM_30160 alsB; D-allose-binding periplasmic protein precursor K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D YIM_39860 rbsC8; Ribose transport system permease protein RbsC K02057 ABC.SS.P; simple sugar transport system permease protein
D YIM_10530 rbsC3; Ribose transport system permease protein RbsC K02057 ABC.SS.P; simple sugar transport system permease protein
D YIM_30165 rbsC4; Ribose transport system permease protein RbsC K02057 ABC.SS.P; simple sugar transport system permease protein
D YIM_09095 araG1; Arabinose import ATP-binding protein AraG K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YIM_10525 mglA1; Galactose/methyl galactoside import ATP-binding protein MglA K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YIM_30170 mglA3; Galactose/methyl galactoside import ATP-binding protein MglA K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YIM_39865 rbsA6; Ribose import ATP-binding protein RbsA K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YIM_46260 pstS2; Phosphate-binding protein PstS 3 precursor K02040 pstS; phosphate transport system substrate-binding protein
D YIM_05200 pstS1; Phosphate-binding protein PstS 1 precursor K02040 pstS; phosphate transport system substrate-binding protein
D YIM_46255 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D YIM_46250 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D YIM_46245 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D YIM_16665 phnD; Phosphate-import protein PhnD precursor K02044 phnD; phosphonate transport system substrate-binding protein
D YIM_16675 phnE; Phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D YIM_16670 artM1; Arginine transport ATP-binding protein ArtM K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D YIM_38020 glnH6; ABC transporter glutamine-binding protein GlnH precursor K10005 gluB; glutamate transport system substrate-binding protein
D YIM_38025 glnH7; ABC transporter glutamine-binding protein GlnH precursor K10005 gluB; glutamate transport system substrate-binding protein
D YIM_13145 glnH3; ABC transporter glutamine-binding protein GlnH precursor K10005 gluB; glutamate transport system substrate-binding protein
D YIM_06975 glnH2; ABC transporter glutamine-binding protein GlnH precursor K10005 gluB; glutamate transport system substrate-binding protein
D YIM_17260 glnH4; ABC transporter glutamine-binding protein GlnH precursor K10005 gluB; glutamate transport system substrate-binding protein
D YIM_48190 glnH11; ABC transporter glutamine-binding protein GlnH precursor K10005 gluB; glutamate transport system substrate-binding protein
D YIM_03485 glnH1; ABC transporter glutamine-binding protein GlnH precursor K10005 gluB; glutamate transport system substrate-binding protein
D YIM_13140 glnM1; putative glutamine ABC transporter permease protein GlnM K10006 gluC; glutamate transport system permease protein
D YIM_48195 glnM2; putative glutamine ABC transporter permease protein GlnM K10006 gluC; glutamate transport system permease protein
D YIM_03480 yecS2; Inner membrane amino-acid ABC transporter permease protein YecS K10006 gluC; glutamate transport system permease protein
D YIM_13135 glnP1; putative glutamine ABC transporter permease protein GlnP K10007 gluD; glutamate transport system permease protein
D YIM_48200 glnP2; putative glutamine ABC transporter permease protein GlnP K10007 gluD; glutamate transport system permease protein
D YIM_03475 yecS1; Inner membrane amino-acid ABC transporter permease protein YecS K10007 gluD; glutamate transport system permease protein
D YIM_13150 glnQ1; Glutamine transport ATP-binding protein GlnQ K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D YIM_30640 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YIM_32100 braC; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YIM_34920 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YIM_28505 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YIM_30645 Branched-chain amino acid transport system / permease component K01997 livH; branched-chain amino acid transport system permease protein
D YIM_28495 livH2; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D YIM_32095 livH4; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D YIM_34915 livH6; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D YIM_30650 lsrA; Autoinducer 2 import ATP-binding protein LsrA K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YIM_28500 livH3; High-affinity branched-chain amino acid transport system permease protein LivH K01998 livM; branched-chain amino acid transport system permease protein
D YIM_34910 livH5; High-affinity branched-chain amino acid transport system permease protein LivH K01998 livM; branched-chain amino acid transport system permease protein
D YIM_28485 opuCA3; Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YIM_32085 ybhF4; putative ABC transporter ATP-binding protein YbhF K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YIM_34905 lptB2; Lipopolysaccharide export system ATP-binding protein LptB K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YIM_30655 livF3; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YIM_23165 livF1; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YIM_28490 livF2; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YIM_32080 livF4; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YIM_34900 livF5; High-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YIM_04675 metN; Methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D YIM_23175 amiC1; Aliphatic amidase expression-regulating protein K11959 urtA; urea transport system substrate-binding protein
D YIM_26080 amiC2; Aliphatic amidase expression-regulating protein K11959 urtA; urea transport system substrate-binding protein
D YIM_23180 livH1; High-affinity branched-chain amino acid transport system permease protein LivH K11960 urtB; urea transport system permease protein
D YIM_23170 lptB1; Lipopolysaccharide export system ATP-binding protein LptB K11961 urtC; urea transport system permease protein
D YIM_46585 glnH9; ABC transporter glutamine-binding protein GlnH precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D YIM_46590 artP; Arginine-binding extracellular protein ArtP precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D YIM_45855 glnH8; ABC transporter glutamine-binding protein GlnH precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D YIM_47205 glnH10; ABC transporter glutamine-binding protein GlnH precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D YIM_31750 glnH5; Glutamine-binding periplasmic protein precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D YIM_23910 fliY; Cystine-binding periplasmic protein precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D YIM_46580 artQ1; Arginine transport system permease protein ArtQ K02029 ABC.PA.P; polar amino acid transport system permease protein
D YIM_47200 artQ2; Arginine transport system permease protein ArtQ K02029 ABC.PA.P; polar amino acid transport system permease protein
D YIM_31745 yxeN; putative amino-acid permease protein YxeN K02029 ABC.PA.P; polar amino acid transport system permease protein
D YIM_23905 yecS3; Inner membrane amino-acid ABC transporter permease protein YecS K02029 ABC.PA.P; polar amino acid transport system permease protein
D YIM_31740 tcyC; L-cystine import ATP-binding protein TcyC K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D YIM_46575 artM2; Arginine transport ATP-binding protein ArtM K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D YIM_47195 glnQ3; Glutamine transport ATP-binding protein GlnQ K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D YIM_35780 ygiS; Putative binding protein YgiS precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D YIM_04850 oppA; Oligopeptide-binding protein OppA precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D YIM_04855 dppB2; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein
D YIM_04860 gsiD3; Glutathione transport system permease protein GsiD K15582 oppC; oligopeptide transport system permease protein
D YIM_04865 oppD3; Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D YIM_04870 oppF3; Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D YIM_05405 appA1; Oligopeptide-binding protein AppA precursor K13889 gsiB; glutathione transport system substrate-binding protein
D YIM_05410 appA2; Oligopeptide-binding protein AppA precursor K13889 gsiB; glutathione transport system substrate-binding protein
D YIM_05415 dppB3; Dipeptide transport system permease protein DppB K13890 gsiC; glutathione transport system permease protein
D YIM_05420 oppC; Oligopeptide transport system permease protein OppC K13891 gsiD; glutathione transport system permease protein
D YIM_17500 gsiB5; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_01975 dppA1; Periplasmic dipeptide transport protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_16515 dppA3; Periplasmic dipeptide transport protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_16735 gsiB3; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_17130 gsiB4; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_12830 gsiB2; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_00280 gsiB1; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_21925 gsiB6; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_21930 nikA; Nickel-binding periplasmic protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_23245 gsiB7; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_24320 dppA5; Periplasmic dipeptide transport protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_20310 hbpA1; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_32620 hbpA2; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_32810 gsiB8; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_36715 gsiB9; Glutathione-binding protein GsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YIM_17505 gsiC5; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_01980 dppB1; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_16520 gsiC3; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_16740 gsiC4; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_17125 nikB1; Nickel transport system permease protein NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_12835 gsiC2; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_00285 gsiC1; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_21775 gsiC7; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_23240 ddpC6; putative D,D-dipeptide transport system permease protein DdpC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_24325 dppB4; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_20305 gsiC6; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_32635 nikB2; Nickel transport system permease protein NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_32820 gsiC8; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_36725 dppB5; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YIM_17510 ddpC5; putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YIM_01985 gsiD2; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YIM_16525 ddpC2; putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YIM_16745 ddpC3; putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YIM_17120 ddpC4; putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YIM_12840 ddpC1; putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YIM_00290 gsiD1; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YIM_21780 gsiD4; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YIM_32640 oppD9; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_24330 dppC; Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YIM_20300 oppD7; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_32825 ddpD; putative D,D-dipeptide transport ATP-binding protein DdpD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_36720 gsiD5; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YIM_17515 gsiA3; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_05425 gsiA1; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_01990 oppD2; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_16750 oppD5; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_12845 gsiA2; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_00295 oppD1; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_21785 oppD8; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_36710 oppD10; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_17115 oppD6; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_16530 oppD4; Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YIM_01995 oppF2; Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D YIM_16535 oppF4; Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D YIM_17165 fhuD; Iron(3+)-hydroxamate-binding protein FhuD precursor K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D YIM_17170 fhuB; Iron(3+)-hydroxamate import system permease protein FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D YIM_17160 yusV4; putative siderophore transport system ATP-binding protein YusV K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D YIM_44535 yfmC3; Fe(3+)-citrate-binding protein YfmC precursor K25287 desE; iron-desferrioxamine transport system substrate-binding protein
D YIM_40205 yhfQ; Putative ABC transporter substrate-binding lipoprotein YhfQ precursor K25286 fagD; iron-siderophore transport system substrate-binding protein
D YIM_33385 yfiY2; putative siderophore-binding lipoprotein YfiY precursor K25286 fagD; iron-siderophore transport system substrate-binding protein
D YIM_26020 yfmC2; Fe(3+)-citrate-binding protein YfmC precursor K25286 fagD; iron-siderophore transport system substrate-binding protein
D YIM_26015 fepD1; Ferric enterobactin transport system permease protein FepD K23186 fepD; iron-siderophore transport system permease protein
D YIM_33390 yfiZ2; putative siderophore transport system permease protein YfiZ precursor K23186 fepD; iron-siderophore transport system permease protein
D YIM_40190 fepD2; Ferric enterobactin transport system permease protein FepD K23186 fepD; iron-siderophore transport system permease protein
D YIM_26010 fepG1; Ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein
D YIM_33395 yfhA; putative siderophore transport system permease protein YfhA K23187 fepG; iron-siderophore transport system permease protein
D YIM_40185 fepG2; Ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein
D YIM_26005 yusV5; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D YIM_10635 yusV1; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D YIM_33400 yusV6; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D YIM_15640 yfmC1; Fe(3+)-citrate-binding protein YfmC precursor K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D YIM_04155 yfiY1; putative siderophore-binding lipoprotein YfiY precursor K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D YIM_25830 corrinoid ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D YIM_37410 vitamin B12-transporter protein BtuF K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D YIM_35375 vitamin B12-transporter protein BtuF K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D YIM_15645 fecD; Fe(3+) dicitrate transport system permease protein FecD K02015 ABC.FEV.P; iron complex transport system permease protein
D YIM_25825 hmuU1; Hemin transport system permease protein HmuU K02015 ABC.FEV.P; iron complex transport system permease protein
D YIM_37420 hmuU3; Hemin transport system permease protein HmuU K02015 ABC.FEV.P; iron complex transport system permease protein
D YIM_35385 hmuU2; Hemin transport system permease protein HmuU K02015 ABC.FEV.P; iron complex transport system permease protein
D YIM_09165 ylmA1; putative ABC transporter ATP-binding protein YlmA K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D YIM_15655 yusV2; putative siderophore transport system ATP-binding protein YusV K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D YIM_21110 ylmA2; putative ABC transporter ATP-binding protein YlmA K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D YIM_35380 fhuC; Iron(3+)-hydroxamate import ATP-binding protein FhuC K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D YIM_37415 hmuV; Hemin import ATP-binding protein HmuV K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D YIM_41715 bioY2; Biotin transporter BioY2 K03523 bioY; biotin transport system substrate-specific component
D YIM_46360 hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component
D YIM_46370 Cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D YIM_46365 ykoD; Putative HMP/thiamine import ATP-binding protein YkoD K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D YIM_02770 psaA1; Manganese ABC transporter substrate-binding lipoprotein precursor K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D YIM_16975 psaA2; Manganese ABC transporter substrate-binding lipoprotein precursor K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D YIM_16965 znuB2; High-affinity zinc uptake system membrane protein ZnuB K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D YIM_02780 znuB1; High-affinity zinc uptake system membrane protein ZnuB K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D YIM_02775 znuC1; Zinc import ATP-binding protein ZnuC K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D YIM_16960 yusV3; putative siderophore transport system ATP-binding protein YusV K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D YIM_01280 tagG; Teichoic acid translocation permease protein TagG K09690 wzm; homopolymeric O-antigen transport system permease protein
D YIM_01275 tagH; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D YIM_38615 ABC-2 type transporter K09694 nodJ; lipooligosaccharide transport system permease protein
D YIM_38620 ABC-2 type transporter K09694 nodJ; lipooligosaccharide transport system permease protein
D YIM_38625 drrA20; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D YIM_03110 drrB2; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K25140 drrB; daunorubicin/doxorubicin transport system permease protein
D YIM_03105 drrA3; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K25141 drrA; daunorubicin/doxorubicin transport system ATP-binding protein
D YIM_02715 drrB1; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K18233 oleC5; oleandomycin transport system permease protein
D YIM_32855 drrB8; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K18233 oleC5; oleandomycin transport system permease protein
D YIM_02720 drrA2; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K18232 oleC4; oleandomycin transport system ATP-binding protein
D YIM_32860 drrA13; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K18232 oleC4; oleandomycin transport system ATP-binding protein
D YIM_01690 ABC-2 family transporter protein K25149 narB; polyether ionophore transport system permease protein
D YIM_33370 ABC-2 family transporter protein K25149 narB; polyether ionophore transport system permease protein
D YIM_33365 ytrB2; ABC transporter ATP-binding protein YtrB K25150 narA; polyether ionophore transport system ATP-binding protein
D YIM_01695 drrA1; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K25150 narA; polyether ionophore transport system ATP-binding protein
D YIM_06775 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D YIM_06770 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D YIM_05765 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_38075 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_39370 drrB11; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_47455 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_47540 drrB13; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_44435 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_09200 drrB4; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_05350 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_09880 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_18130 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_16090 drrB6; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_03805 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_03940 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_04640 drrB3; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_31880 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_31925 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_28225 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_27030 drrB7; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_33760 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_33765 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_34445 drrB9; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_35560 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_36135 drrB10; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_36225 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_37130 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_18880 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_14075 drrB5; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_40525 drrB12; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_15065 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_15070 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_06950 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_08325 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_36065 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_38975 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YIM_36230 drrA17; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_38080 drrA19; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_38980 drrA21; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_39365 drrA22; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_40530 drrA23; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_47450 yxlF7; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_47535 drrA25; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_44430 drrA24; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_09205 drrA7; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_14080 drrA8; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_18885 yxlF4; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_09885 ybhF2; putative ABC transporter ATP-binding protein YbhF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_05770 yxlF2; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_18135 drrA10; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_15075 skfE2; SkfA peptide export ATP-binding protein SkfE K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_06960 skfE1; SkfA peptide export ATP-binding protein SkfE K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_16095 drrA9; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_03810 drrA4; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_03945 ybhF1; putative ABC transporter ATP-binding protein YbhF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_08120 drrA6; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_08330 yxlF3; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_04645 drrA5; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_31875 yxlF6; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_31920 Fluoroquinolones export ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_28220 drrA12; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_28430 ssuB2; Aliphatic sulfonates import ATP-binding protein SsuB K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_27035 drrA11; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_24760 ytrB1; ABC transporter ATP-binding protein YtrB K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_33755 Fluoroquinolones export ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_34450 drrA14; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_35555 Fluoroquinolones export ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_36070 drrA15; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_36130 drrA16; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_37125 drrA18; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_08650 znuC2; Zinc import ATP-binding protein ZnuC K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_47395 skfE3; SkfA peptide export ATP-binding protein SkfE K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_15055 ybhF3; putative ABC transporter ATP-binding protein YbhF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_19440 yxlF5; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YIM_40385 macB5; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D YIM_45260 macB6; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D YIM_06870 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D YIM_15950 outer membrane-specific lipoprotein transporter subunit LolE K02004 ABC.CD.P; putative ABC transport system permease protein
D YIM_03775 macB2; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D YIM_16935 ytrF; ABC transporter permease YtrF precursor K02004 ABC.CD.P; putative ABC transport system permease protein
D YIM_04250 macB3; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D YIM_25260 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D YIM_26325 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D YIM_34770 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D YIM_38560 outer membrane-specific lipoprotein transporter subunit LolC K02004 ABC.CD.P; putative ABC transport system permease protein
D YIM_25270 lolD3; Lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YIM_40390 lolD4; Lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YIM_45265 macB7; Macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YIM_47475 lolD5; Lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YIM_06865 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YIM_15945 bceA1; Bacitracin export ATP-binding protein BceA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YIM_03770 macB1; Macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YIM_12385 lolD2; Lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YIM_16930 bceA2; Bacitracin export ATP-binding protein BceA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YIM_04245 lolD1; Lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YIM_26320 bceA3; Bacitracin export ATP-binding protein BceA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YIM_34765 bceA4; Bacitracin export ATP-binding protein BceA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YIM_38565 bceA5; Bacitracin export ATP-binding protein BceA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YIM_25265 macB4; Macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YIM_18160 hypothetical protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D YIM_40130 sdcS; Sodium-dependent dicarboxylate transporter SdcS K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D YIM_30425 citT1; Citrate carrier K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D YIM_35945 dinF; DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D YIM_16780 csbC; putative metabolite transport protein CsbC K06610 iolF; MFS transporter, SP family, inositol transporter
D YIM_30610 kgtP1; Alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D YIM_38545 kgtP2; Alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D YIM_45815 proP10; Proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D YIM_29615 proP6; Proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D YIM_25635 proP3; Proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D YIM_28340 proP5; Proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D YIM_26470 proP4; Proline/betaine transporter K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
D YIM_30040 proP7; Proline/betaine transporter K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
D YIM_32445 proP8; Proline/betaine transporter K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter
D YIM_38645 nanT2; Putative sialic acid transporter K03290 nanT; MFS transporter, SHS family, sialic acid transporter
D YIM_21265 ttuB1; Putative tartrate transporter K13021 ttuB; MFS transporter, ACS family, tartrate transporter
D YIM_37760 dgoT2; D-galactonate transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D YIM_29935 garP1; putative galactarate transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D YIM_46715 pcaK3; 4-hydroxybenzoate transporter PcaK K05548 benK; MFS transporter, AAHS family, benzoate transport protein
D YIM_19525 pcaK1; 4-hydroxybenzoate transporter PcaK K05548 benK; MFS transporter, AAHS family, benzoate transport protein
D YIM_24065 pcaK2; 4-hydroxybenzoate transporter PcaK K26744 vanK; MFS transporter, AAHS family, vanillate permease
D YIM_11800 yycB1; putative transporter YycB K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D YIM_16255 yycB2; putative transporter YycB K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D YIM_42170 narK2; Nitrate/nitrite transporter NarK K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D YIM_22315 narK1; putative nitrate/nitrite transporter NarK2 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D YIM_10665 bcr; Bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D YIM_41500 ydhP7; Inner membrane transport protein YdhP K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D YIM_15015 ydhP1; Inner membrane transport protein YdhP K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D YIM_27535 ydhP4; Inner membrane transport protein YdhP K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D YIM_25195 ydhP2; Inner membrane transport protein YdhP K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D YIM_33145 ydhP5; Inner membrane transport protein YdhP K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D YIM_26655 ydhP3; Inner membrane transport protein YdhP K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D YIM_39665 ydhP6; Inner membrane transport protein YdhP K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D YIM_12870 Major Facilitator Superfamily protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D YIM_40930 multidrug resistance protein MdtH K08152 lmrP; MFS transporter, DHA1 family, multidrug resistance protein B
D YIM_37930 qacA13; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YIM_40950 qacA14; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YIM_46820 qacA15; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YIM_03070 qacA1; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YIM_11475 qacA3; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YIM_16140 qacA6; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YIM_27405 qacA10; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YIM_24460 qacA8; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YIM_25365 qacA9; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YIM_34225 qacA12; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YIM_19690 stp8; Multidrug resistance protein stp K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein
D YIM_25885 hsrA1; putative transport protein HsrA K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D YIM_43150 MFS-type drug efflux transporter P55 K27247 K27247; MFS transporter, DHA2 family, triacylglyceride efflux pump
D YIM_47555 yfmO2; Multidrug efflux protein YfmO K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D YIM_27400 yfmO1; Multidrug efflux protein YfmO K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D YIM_23985 fsr; Fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D YIM_42415 ynfM2; Inner membrane transport protein YnfM K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D YIM_24985 Vacuole effluxer Atg22 like protein K06902 UMF1; MFS transporter, UMF1 family
D YIM_22965 ygcS; Inner membrane metabolite transport protein YgcS K08368 yaaU; MFS transporter, putative metabolite transport protein
D YIM_29115 naiP2; Putative niacin/nicotinamide transporter NaiP K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D YIM_27135 naiP1; Putative niacin/nicotinamide transporter NaiP K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D YIM_48055 ptsI3; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D YIM_10445 ptsI1; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D YIM_33035 ptsI2; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D YIM_04185 ptsH1; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D YIM_17715 ptsH2; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D YIM_33045 ptsH3; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D YIM_17735 crr; Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YIM_17720 ptsG; PTS system glucose-specific EIICBA component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D YIM_17730 glcB; PTS system glucoside-specific EIICBA component K02803 nagEb; N-acetylglucosamine PTS system EIIB component [EC:2.7.1.193]
D YIM_10435 fruB; Multiphosphoryl transfer protein K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D YIM_10425 mtlA1; PTS system mannitol-specific EIICBA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D YIM_33060 PTS system glucitol/sorbitol-specific transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D YIM_33055 srlE; Glucitol/sorbitol-specific phosphotransferase enzyme IIB component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D YIM_33050 srlA; Glucitol/sorbitol permease IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D YIM_06495 dhaM; PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D YIM_43030 glpF; putative glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D YIM_42090 kch2; Voltage-gated potassium channel Kch K10716 kch; voltage-gated potassium channel
D YIM_16985 ybaL; Inner membrane protein YbaL K10716 kch; voltage-gated potassium channel
D YIM_31720 kch1; Voltage-gated potassium channel Kch K10716 kch; voltage-gated potassium channel
D YIM_06965 hypothetical protein K10716 kch; voltage-gated potassium channel
D YIM_03305 Ion transport protein K08714 VGSC; voltage-gated sodium channel
D YIM_11285 amt; Ammonia channel precursor K03320 amt; ammonium transporter, Amt family
D YIM_00805 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D YIM_29675 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D YIM_26275 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D YIM_27590 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D YIM_04425 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D YIM_39065 ykuT; putative MscS family protein YkuT K22044 ybiO; moderate conductance mechanosensitive channel
D YIM_26075 ureI; Acid-activated urea channel K22112 amiS; putative amide transporter protein
D YIM_42305 corA; Magnesium transport protein CorA K03284 corA; magnesium transporter
D YIM_30780 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D YIM_30785 crcB; Putative fluoride ion transporter CrcB K06199 crcB; fluoride exporter
D YIM_27710 corC3; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YIM_20430 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YIM_27705 corC2; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YIM_20435 corC1; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YIM_38195 corC4; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YIM_48020 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D YIM_04095 gabP1; GABA permease K11735 gabP; GABA permease
D YIM_34585 gabP2; GABA permease K11735 gabP; GABA permease
D YIM_12115 cycA; D-serine/D-alanine/glycine transporter K11738 ansP; L-asparagine permease
D YIM_10565 yhdG4; putative amino acid permease YhdG K16238 eat; ethanolamine permease
D YIM_18835 gadC; Glutamate/gamma-aminobutyrate antiporter K20265 gadC; glutamate:GABA antiporter
D YIM_06220 czcD; Cobalt-zinc-cadmium resistance protein CzcD K16264 czcD; cobalt-zinc-cadmium efflux system protein
D YIM_20250 zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family
D YIM_47015 qacC; Quaternary ammonium compound-resistance protein QacC K03297 emrE; small multidrug resistance pump
D YIM_20635 ebrB; Multidrug resistance protein EbrB K03297 emrE; small multidrug resistance pump
D YIM_20640 emrE; Multidrug transporter EmrE K03297 emrE; small multidrug resistance pump
D YIM_13695 sugE1; Quaternary ammonium compound-resistance protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D YIM_17300 sugE2; Quaternary ammonium compound-resistance protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D YIM_02005 eamA1; putative amino-acid metabolite efflux pump K15268 eamA; O-acetylserine/cysteine efflux transporter
D YIM_15395 EamA-like transporter family protein K15269 pecM; probable blue pigment (indigoidine) exporter
D YIM_16495 EamA-like transporter family protein K15269 pecM; probable blue pigment (indigoidine) exporter
D YIM_13025 yicL; putative inner membrane transporter YicL K03298 TC.DME; drug/metabolite transporter, DME family
D YIM_46110 EamA-like transporter family protein K03298 TC.DME; drug/metabolite transporter, DME family
D YIM_39265 rhtA2; Threonine/homoserine exporter RhtA K11939 rhtA; inner membrane transporter RhtA
D YIM_46235 rhtA3; Threonine/homoserine exporter RhtA K11939 rhtA; inner membrane transporter RhtA
D YIM_43515 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D YIM_19960 idnT2; Gnt-II system L-idonate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D YIM_31580 ygbN; Inner membrane permease YgbN K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D YIM_16190 idnT1; Gnt-II system L-idonate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D YIM_08240 dsdX; DsdX permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D YIM_12020 lutP; L-lactate permease K03303 lutP; lactate permease
D YIM_08610 chaA; Sodium/proton antiporter ChaA K07300 chaA; Ca2+:H+ antiporter
D YIM_00700 actP2; Cation/acetate symporter ActP K14393 actP; cation/acetate symporter
D YIM_19130 actP6; Cation/acetate symporter ActP K14393 actP; cation/acetate symporter
D YIM_14310 actP5; Cation/acetate symporter ActP K14393 actP; cation/acetate symporter
D YIM_10895 actP4; Cation/acetate symporter ActP K14393 actP; cation/acetate symporter
D YIM_10885 actP3; Cation/acetate symporter ActP K14393 actP; cation/acetate symporter
D YIM_11180 dctA2; Aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D YIM_04040 dctA1; Aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D YIM_31645 dctA3; Aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D YIM_02245 nhaA1; Na(+)/H(+) antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D YIM_15875 nhaA2; Na(+)/H(+) antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D YIM_03010 nhaK; Sodium, potassium, lithium and rubidium/H(+) antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D YIM_34510 apnhaP; Na(+)/H(+) antiporter ApNhaP K24163 nhaK; monovalent cation/hydrogen antiporter
D YIM_19555 potassium/proton antiporter K24160 NHA1; sodium/hydrogen antiporter
D YIM_36585 potassium/proton antiporter K24160 NHA1; sodium/hydrogen antiporter
D YIM_14015 nhaP; K(+)/H(+) antiporter NhaP K11105 cvrA; potassium/hydrogen antiporter
D YIM_21175 nhaS2; High-affinity Na(+)/H(+) antiporter NhaS3 K26731 CHX; K+:H+ antiporter
D YIM_16045 nhaS1; High-affinity Na(+)/H(+) antiporter NhaS3 K26731 CHX; K+:H+ antiporter
D YIM_22795 nhaS3; High-affinity Na(+)/H(+) antiporter NhaS3 K26731 CHX; K+:H+ antiporter
D YIM_31315 khtT; K(+)/H(+) antiporter subunit KhtT K07228 khtT; K+:H+ antiporter subunit KhtT
D YIM_10675 yhaU1; K(+)/H(+) antiporter YhaU K26732 khtU; K+:H+ antiporter subunit KhtU
D YIM_31320 yhaU2; K(+)/H(+) antiporter YhaU K26732 khtU; K+:H+ antiporter subunit KhtU
D YIM_31180 trkA1; Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D YIM_31185 trkA2; Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D YIM_11220 uacT; Uric acid transporter UacT K24206 uacT; uric acid transporter
D YIM_19260 pbuG2; Guanine/hypoxanthine permease PbuG K06901 pbuG; adenine/guanine/hypoxanthine permease
D YIM_03680 pbuG1; Guanine/hypoxanthine permease PbuG K06901 pbuG; adenine/guanine/hypoxanthine permease
D YIM_35835 mntH3; Divalent metal cation transporter MntH K03322 mntH; manganese transport protein
D YIM_33010 mntH2; Divalent metal cation transporter MntH K03322 mntH; manganese transport protein
D YIM_37555 siaT; Sialic acid TRAP transporter permease protein SiaT K21393 yiaN; TRAP-type transport system large permease protein
D YIM_14110 arsA2; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D YIM_16080 Sodium Bile acid symporter family protein K03325 ACR3; arsenite transporter
D YIM_33875 Sodium Bile acid symporter family protein K03325 ACR3; arsenite transporter
D YIM_48205 mviN1; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D YIM_26250 Membrane transport protein K13936 mdcF; malonate transporter and related proteins
D YIM_27365 Membrane transport protein K13936 mdcF; malonate transporter and related proteins
D YIM_28700 argO; Arginine exporter protein ArgO K06895 lysE; L-lysine exporter family protein LysE/ArgO
D YIM_44155 rhtB8; Homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D YIM_17400 ygaZ; Inner membrane protein YgaZ K26605 azlC; branched chain amino acid efflux pump
D YIM_12995 AzlC protein K26605 azlC; branched chain amino acid efflux pump
D YIM_17405 Branched-chain amino acid transport protein (AzlD) K26606 azlD; branched chain amino acid efflux pump
D YIM_13000 Branched-chain amino acid transport protein (AzlD) K26606 azlD; branched chain amino acid efflux pump
D YIM_46400 Tripartite tricarboxylate transporter TctA family protein K07793 tctA; putative tricarboxylic transport membrane protein
D YIM_26215 Tripartite tricarboxylate transporter TctA family protein K07793 tctA; putative tricarboxylic transport membrane protein
D YIM_46405 Tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D YIM_26220 Tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D YIM_46410 Tripartite tricarboxylate transporter family receptor K07795 tctC; putative tricarboxylic transport membrane protein
D YIM_26225 Tripartite tricarboxylate transporter family receptor K07795 tctC; putative tricarboxylic transport membrane protein
D YIM_48030 tqsA3; AI-2 transport protein TqsA K20469 K20469; putative heme transporter
D YIM_07760 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D YIM_42270 hypothetical protein K05595 marC; multiple antibiotic resistance protein
D YIM_13895 ftsW2; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D YIM_00830 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D YIM_02800 hypothetical protein K03646 tolA; colicin import membrane protein
D YIM_02400 hppA; K(+)-insensitive pyrophosphate-energized proton pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D YIM_45235 thiol:disulfide interchange protein precursor K06196 ccdA; cytochrome c-type biogenesis protein
D YIM_22320 narG; Nitrate reductase alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D YIM_22325 narY; Respiratory nitrate reductase 2 beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D YIM_22335 narX3; Nitrate reductase-like protein NarX K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D YIM_40490 dorA; Dimethyl sulfoxide/trimethylamine N-oxide reductase precursor K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
D YIM_12015 Nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D YIM_19585 TspO/MBR family protein K05770 TSPO; translocator protein
D YIM_27635 putative Mg(2+) transport ATPase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D YIM_11230 hiuH; 5-hydroxyisourate hydrolase precursor K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D YIM_00425 Copper resistance protein D K07245 pcoD; copper resistance protein D
D YIM_09195 copC; Copper resistance protein C precursor K07156 copC; copper resistance protein C
D YIM_00430 ycnJ; Copper transport protein YcnJ precursor K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:amyy02044]
D YIM_17760 Type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D YIM_07495 Type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D YIM_02360 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D YIM_07520 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D YIM_02365 Bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B
D YIM_07525 Bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B
D YIM_07530 hypothetical protein K12511 tadC; tight adherence protein C
D YIM_13975 YGGT family protein K02221 yggT; YggT family protein
D YIM_38490 comEA; ComE operon protein 1 K02237 comEA; competence protein ComEA
D YIM_38495 ComEC family competence protein K02238 comEC; competence protein ComEC
D YIM_28925 TraM recognition site of TraD and TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D YIM_29730 eccB2; ESX-1 secretion system protein eccB1 K27085 eccB; ESX secretion system ATPase EccB
D YIM_12565 eccB1; ESX-1 secretion system protein eccB1 K27085 eccB; ESX secretion system ATPase EccB
D YIM_44070 eccB3; ESX-1 secretion system protein eccB1 K27085 eccB; ESX secretion system ATPase EccB
D YIM_29760 eccCa4; ESX-1 secretion system protein EccCa1 K27086 eccC; ESX secretion system protein EccC
D YIM_12535 eccCa3; ESX-1 secretion system protein EccCa1 K27086 eccC; ESX secretion system protein EccC
D YIM_44045 eccCa6; ESX-1 secretion system protein EccCa1 K27086 eccC; ESX secretion system protein EccC
D YIM_29725 hypothetical protein K27087 eccD; ESX secretion system protein EccD
D YIM_12555 hypothetical protein K27087 eccD; ESX secretion system protein EccD
D YIM_44050 hypothetical protein K27087 eccD; ESX secretion system protein EccD
D YIM_44080 hypothetical protein K27088 eccE; ESX secretion system protein EccE
D YIM_29795 hypothetical protein K27088 eccE; ESX secretion system protein EccE
D YIM_44085 hypothetical protein K27088 eccE; ESX secretion system protein EccE
D YIM_44055 apr6; Subtilisin DY K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D YIM_12500 Thermophilic serine proteinase precursor K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D YIM_29735 apr3; Subtilisin DY K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D YIM_46675 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D YIM_27675 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D YIM_02620 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D YIM_28755 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D YIM_03195 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D YIM_45020 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D YIM_47950 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D YIM_02615 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D YIM_01255 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D YIM_01490 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D YIM_01055 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D YIM_35660 hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D YIM_44025 WXG domain conatining protein K14956 esx; ESAT-6 family protein
D YIM_44030 WXG domain conatining protein K14956 esx; ESAT-6 family protein
D YIM_05560 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YIM_06580 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YIM_17445 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D YIM_44555 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D YIM_17450 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D YIM_18040 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D YIM_44150 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D YIM_11310 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D YIM_11155 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D YIM_17440 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D YIM_43105 yidC1; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YIM_48285 yidC2; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YIM_27235 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D YIM_42390 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D YIM_27230 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:amyy02042]
D YIM_27710 corC3; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YIM_20430 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YIM_27705 corC2; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YIM_20435 corC1; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YIM_38195 corC4; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YIM_05130 hemeolysin-III related K11068 hlyIII; hemolysin III
D YIM_17615 plcN; Non-hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D YIM_28450 plcB; Phospholipase C 2 precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D YIM_20355 nagJ; O-GlcNAcase NagJ precursor K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 02022 Two-component system [BR:amyy02022]
D YIM_45425 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D YIM_45420 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D YIM_29965 regX1; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D YIM_11095 kdpD; Sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D YIM_11100 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D YIM_04350 mprB1; Signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D YIM_04345 mprA1; Response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA
D YIM_05540 mtrB2; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D YIM_01810 mtrB1; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D YIM_34245 mtrB3; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D YIM_05535 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D YIM_36555 czcS; Sensor protein CzcS precursor K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D YIM_20800 mprA2; Response regulator MprA K18352 vanRAc; two-component system, OmpR family, response regulator VanR
D YIM_36560 cusR; Transcriptional regulatory protein CusR K18352 vanRAc; two-component system, OmpR family, response regulator VanR
D YIM_01925 tcrY1; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YIM_08310 tcrY2; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YIM_28010 tcrY3; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YIM_29960 arlS3; Signal transduction histidine-protein kinase ArlS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YIM_34595 tcrY5; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YIM_40565 rstB; Sensor protein RstB K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YIM_41105 tcrY7; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YIM_40570 copR1; Transcriptional activator protein CopR K02483 K02483; two-component system, OmpR family, response regulator
D YIM_01920 tcrX1; putative transcriptional regulatory protein TcrX K02483 K02483; two-component system, OmpR family, response regulator
D YIM_08315 tcrX2; putative transcriptional regulatory protein TcrX K02483 K02483; two-component system, OmpR family, response regulator
D YIM_28005 tcrX3; putative transcriptional regulatory protein TcrX K02483 K02483; two-component system, OmpR family, response regulator
D YIM_34590 tcrX4; putative transcriptional regulatory protein TcrX K02483 K02483; two-component system, OmpR family, response regulator
D YIM_40585 copR2; Transcriptional activator protein CopR K02483 K02483; two-component system, OmpR family, response regulator
D YIM_41110 copR3; Transcriptional activator protein CopR K02483 K02483; two-component system, OmpR family, response regulator
D YIM_37200 narL; putative transcriptional regulatory protein NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D YIM_26725 nreB5; Oxygen sensor histidine kinase NreB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D YIM_12570 nreC4; Oxygen regulatory protein NreC K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D YIM_04280 evgA1; Positive transcription regulator EvgA K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D YIM_38070 desK19; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D YIM_44425 desK21; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D YIM_01645 desK2; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D YIM_21030 desK12; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D YIM_38065 nreC8; Oxygen regulatory protein NreC K07693 desR; two-component system, NarL family, response regulator DesR
D YIM_41040 vraR14; Response regulator protein VraR K07693 desR; two-component system, NarL family, response regulator DesR
D YIM_44420 degU15; Transcriptional regulatory protein DegU K07693 desR; two-component system, NarL family, response regulator DesR
D YIM_01650 vraR1; Response regulator protein VraR K07693 desR; two-component system, NarL family, response regulator DesR
D YIM_21025 nreC5; Oxygen regulatory protein NreC K07693 desR; two-component system, NarL family, response regulator DesR
D YIM_01830 devS2; Redox sensor histidine kinase response regulator DevS K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D YIM_23835 dosT; Hypoxia sensor histidine kinase response regulator DosT K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D YIM_09455 devS3; Redox sensor histidine kinase response regulator DevS K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D YIM_00855 devS1; Redox sensor histidine kinase response regulator DevS K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D YIM_09450 devR3; Transcriptional regulatory protein DevR (DosR) K07695 devR; two-component system, NarL family, response regulator DevR
D YIM_23825 devR6; Transcriptional regulatory protein DevR (DosR) K07695 devR; two-component system, NarL family, response regulator DevR
D YIM_01835 devR2; Transcriptional regulatory protein DevR (DosR) K07695 devR; two-component system, NarL family, response regulator DevR
D YIM_22275 devR5; Transcriptional regulatory protein DevR (DosR) K07695 devR; two-component system, NarL family, response regulator DevR
D YIM_00865 devR1; Transcriptional regulatory protein DevR (DosR) K07695 devR; two-component system, NarL family, response regulator DevR
D YIM_46415 dcuS2; Sensor histidine kinase DcuS K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D YIM_00665 yehU; Sensor histidine kinase YehU K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D YIM_10870 ypdA; Sensor histidine kinase YpdA K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D YIM_41525 cheB3; Chemotaxis response regulator protein-glutamate methylesterase of group 3 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D YIM_41535 cheR; Chemotaxis protein methyltransferase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D YIM_23120 fixL; Sensor protein FixL K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D YIM_23095 fixJ; Transcriptional regulatory protein FixJ K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D YIM_05640 pdtaS; putative sensor histidine kinase pdtaS K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D YIM_32105 pdtaR; putative transcriptional regulatory protein pdtaR K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:amyy02035]
D YIM_41525 cheB3; Chemotaxis response regulator protein-glutamate methylesterase of group 3 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D YIM_41535 cheR; Chemotaxis protein methyltransferase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D YIM_11395 sigD3; RNA polymerase sigma-D factor K02405 fliA; RNA polymerase sigma factor FliA
D YIM_17760 Type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D YIM_07495 Type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D YIM_02360 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D YIM_07520 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:amyy04812]
D YIM_13955 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D YIM_48260 soj4; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D YIM_27360 soj1; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D YIM_31350 soj2; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D YIM_35710 soj3; Chromosome-partitioning ATPase Soj K03496 parA; chromosome partitioning protein
D YIM_48255 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:amyy04147]
D YIM_39405 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D YIM_04820 eno1; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YIM_33545 eno2; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YIM_18025 gapA; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D YIM_18030 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D YIM_14190 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YIM_00125 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D YIM_35635 Membrane dipeptidase (Peptidase family M19) K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D YIM_12945 SPFH domain / Band 7 family protein K07192 FLOT; flotillin
D YIM_37270 groEL2; 60 kDa chaperonin 2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YIM_43805 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YIM_03405 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YIM_46980 dnaK5; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D YIM_18070 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D YIM_30795 ptpA5; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D YIM_09545 gnl1; Gluconolactonase precursor K01053 gnl; gluconolactonase [EC:3.1.1.17]
D YIM_43740 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D YIM_43755 guaB2; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D YIM_44270 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D YIM_38210 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D YIM_02510 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D YIM_45350 Long-chain-fatty-acid--CoA ligase FadD13 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_42735 lcfB10; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_14090 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_14545 Long-chain-fatty-acid--CoA ligase FadD13 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_27425 lcfB6; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_20780 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_21895 lcfB4; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YIM_47300 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_09040 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05010 fadA1; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_05915 fadA2; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14515 fadA3; Putative acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_14530 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_21940 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_20775 caiD2; Carnitinyl-CoA dehydratase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_33185 paaJ3; 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D YIM_41090 ahcY2; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D YIM_05520 ahcY1; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D YIM_44145 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D YIM_17455 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D YIM_31465 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D YIM_37585 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D YIM_07890 ddc1; L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D YIM_38260 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D YIM_30275 Fumarylacetoacetate (FAA) hydrolase family protein K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D YIM_04540 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D YIM_13770 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D YIM_43035 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D YIM_10570 glnA3; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_06610 glnA1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_06655 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_30760 puuA; Gamma-glutamylputrescine synthetase PuuA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_30935 glnA4; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YIM_45290 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D YIM_05055 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D YIM_05330 Putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D YIM_09690 serA1; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YIM_41185 yoaD; Putative 2-hydroxyacid dehydrogenase YoaD K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YIM_43595 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D YIM_10820 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_12220 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YIM_09505 etfA; Electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D YIM_27670 gdhA; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D YIM_18065 zwf2; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D YIM_10455 zwf1; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D YIM_18035 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D YIM_45450 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:amyy02048]
D YIM_44775 ydiP2; putative BsuMI modification methylase subunit YdiP K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YIM_01545 aplIM1; Modification methylase AplI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YIM_07770 ydiP1; putative BsuMI modification methylase subunit YdiP K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YIM_21710 aplIM2; Modification methylase AplI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D YIM_48585 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D YIM_13295 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D YIM_05315 Restriction endonuclease K07448 mrr; restriction system protein
D YIM_13175 mazF9; mRNA interferase MazF9 K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D YIM_13170 mazE9; Antitoxin MazE9 K26989 mazE9; antitoxin MazE9
D YIM_03410 DNA-binding transcriptional activator PspC K03973 pspC; phage shock protein C
D YIM_31675 vapC5; Ribonuclease VapC5 K07062 fitB; toxin FitB [EC:3.1.-.-]
D YIM_13955 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D YIM_09720 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YIM_09525 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:amyy04090]
D YIM_30795 ptpA5; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:amyy01504]
D YIM_42370 Aminoglycoside/hydroxyurea antibiotic resistance kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D YIM_41395 Aminoglycoside/hydroxyurea antibiotic resistance kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D YIM_19755 Aminoglycoside/hydroxyurea antibiotic resistance kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D YIM_37455 Aminoglycoside/hydroxyurea antibiotic resistance kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D YIM_40145 homoserine kinase K17880 hyg; hygromycin-B 7''-O-kinase [EC:2.7.1.119]
D YIM_20255 Phosphotransferase enzyme family protein K18844 aph; spectinomycin phosphotransferase
D YIM_02715 drrB1; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K18233 oleC5; oleandomycin transport system permease protein
D YIM_32855 drrB8; Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB K18233 oleC5; oleandomycin transport system permease protein
D YIM_37275 tetM; Tetracycline resistance protein TetM K18220 tetM; ribosomal protection tetracycline resistance protein
D YIM_08965 ermD; rRNA adenine N-6-methyltransferase K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D YIM_16645 yjjK; putative ABC transporter ATP-binding protein YjjK K18230 tylC; macrolide transport system ATP-binding/permease protein
D YIM_27455 putative ABC transporter ATP-binding protein K18230 tylC; macrolide transport system ATP-binding/permease protein
D YIM_27460 putative ABC transporter ATP-binding protein K18230 tylC; macrolide transport system ATP-binding/permease protein
D YIM_31265 yheS2; putative ABC transporter ATP-binding protein YheS K18230 tylC; macrolide transport system ATP-binding/permease protein
D YIM_02720 drrA2; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K18232 oleC4; oleandomycin transport system ATP-binding protein
D YIM_32860 drrA13; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K18232 oleC4; oleandomycin transport system ATP-binding protein
D YIM_10270 Erythromycin esterase K06880 ereA_B; erythromycin esterase [EC:3.1.1.-]
D YIM_03360 Erythromycin esterase K06880 ereA_B; erythromycin esterase [EC:3.1.1.-]
D YIM_20410 Erythromycin esterase K06880 ereA_B; erythromycin esterase [EC:3.1.1.-]
D YIM_34145 Erythromycin esterase K06880 ereA_B; erythromycin esterase [EC:3.1.1.-]
D YIM_18695 Erythromycin esterase K06880 ereA_B; erythromycin esterase [EC:3.1.1.-]
D YIM_19175 linA; Lincosamide resistance protein K19545 lnuA_C_D_E; lincosamide nucleotidyltransferase A/C/D/E
D YIM_25805 vatD; Streptogramin A acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D YIM_41500 ydhP7; Inner membrane transport protein YdhP K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D YIM_15015 ydhP1; Inner membrane transport protein YdhP K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D YIM_27535 ydhP4; Inner membrane transport protein YdhP K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D YIM_25195 ydhP2; Inner membrane transport protein YdhP K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D YIM_33145 ydhP5; Inner membrane transport protein YdhP K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D YIM_16220 Chloramphenicol 3-O phosphotransferase K18554 cpt; chloramphenicol 3-O phosphotransferase [EC:2.7.1.-]
D YIM_37930 qacA13; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YIM_40950 qacA14; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YIM_46820 qacA15; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YIM_03070 qacA1; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YIM_11475 qacA3; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YIM_16140 qacA6; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YIM_27405 qacA10; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YIM_24460 qacA8; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YIM_25365 qacA9; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YIM_34225 qacA12; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D YIM_16465 pcpB3; Pentachlorophenol 4-monooxygenase K21267 iri; rifampicin monooxygenase [EC:1.14.13.211]
D YIM_09330 pcpB1; Pentachlorophenol 4-monooxygenase K21267 iri; rifampicin monooxygenase [EC:1.14.13.211]
D YIM_35250 htpX2; Protease HtpX K02172 blaR1; bla regulator protein blaR1
D YIM_35245 blaI2; Transcriptional regulator BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D YIM_22935 blaI1; Transcriptional regulator BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D YIM_40010 blaB2; Beta-lactamase regulatory protein BlaB K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D YIM_39155 penPC; Beta-lactamase 1 precursor K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D YIM_08600 Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D YIM_36565 vanYB1; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D YIM_39210 vanYB2; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D YIM_36555 czcS; Sensor protein CzcS precursor K18351 vanSAc; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D YIM_20800 mprA2; Response regulator MprA K18352 vanRAc; two-component system, OmpR family, response regulator VanR
D YIM_36560 cusR; Transcriptional regulatory protein CusR K18352 vanRAc; two-component system, OmpR family, response regulator VanR
D YIM_36530 vanH; D-specific alpha-keto acid dehydrogenase K18347 vanH; D-specific alpha-keto acid dehydrogenase [EC:1.1.1.-]
D YIM_36535 vanB; Vancomycin B-type resistance protein VanB K15739 vanB; D-alanine---(R)-lactate ligase [EC:6.1.2.1]
D YIM_44415 vanX2; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D YIM_33815 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D YIM_36540 vanX1; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D YIM_36590 mprF; Phosphatidylglycerol lysyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D YIM_16100 bepR2; HTH-type transcriptional repressor BepR K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D YIM_23235 hmrR2; HTH-type transcriptional regulator HmrR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:amyy00536]
D YIM_20355 nagJ; O-GlcNAcase NagJ precursor K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
D YIM_45555 hbhA; Heparin-binding hemagglutinin K16645 hbhA; heparin binding hemagglutinin HbhA
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:amyy00537]
D YIM_35635 Membrane dipeptidase (Peptidase family M19) K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D YIM_20355 nagJ; O-GlcNAcase NagJ precursor K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:amyy03100]
D YIM_07005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YIM_00070 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YIM_04465 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YIM_37070 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YIM_39145 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YIM_06225 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YIM_04330 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YIM_01505 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YIM_37990 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D YIM_45770 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D YIM_15450 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D YIM_04740 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D YIM_09730 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D YIM_09735 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D YIM_45775 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D YIM_00645 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YIM_47090 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YIM_38905 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YIM_15445 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YIM_08925 tRNA-His K14226 tRNA-His; tRNA His
D YIM_00050 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D YIM_04915 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YIM_21610 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YIM_00210 tRNA-Ser K14228 tRNA-Leu; tRNA Leu
D YIM_32110 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YIM_08390 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YIM_08915 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YIM_45995 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YIM_06755 tRNA-Met K14230 tRNA-Met; tRNA Met
D YIM_06740 tRNA-Met K14230 tRNA-Met; tRNA Met
D YIM_37140 tRNA-Met K14230 tRNA-Met; tRNA Met
D YIM_44610 tRNA-Met K14230 tRNA-Met; tRNA Met
D YIM_45765 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D YIM_28785 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D YIM_38900 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D YIM_02130 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D YIM_01800 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YIM_01745 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YIM_01500 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YIM_01320 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YIM_44615 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YIM_02915 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YIM_02450 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YIM_44560 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D YIM_44800 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D YIM_15455 tRNA-Val K14237 tRNA-Val; tRNA Val
D YIM_12045 tRNA-Val K14237 tRNA-Val; tRNA Val
D YIM_15435 tRNA-Val K14237 tRNA-Val; tRNA Val
D YIM_10960 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YIM_12090 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YIM_31430 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YIM_06615 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YIM_10965 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YIM_12095 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YIM_31425 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YIM_06620 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YIM_12100 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YIM_31420 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YIM_06625 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YIM_10970 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YIM_01935 ffs; Bacterial small signal recognition particle RNA K01983 ffs; SRP RNA
D YIM_41860 rnpA; Bacterial RNase P class A K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D YIM_28040 lcdH2; L-carnitine dehydrogenase K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108]
D YIM_32440 idnD; L-idonate 5-dehydrogenase (NAD(P)(+)) K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264]
D YIM_03985 S-(hydroxymethyl)mycothiol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306]
D YIM_25610 S-(hydroxymethyl)mycothiol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306]
D YIM_21405 hpsN1; Sulfopropanediol 3-dehydrogenase K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308]
D YIM_21450 hpsN2; Sulfopropanediol 3-dehydrogenase K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308]
D YIM_01225 fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333]
D YIM_27725 putative oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D YIM_39670 putative oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D YIM_17135 pdxA2; 4-hydroxythreonine-4-phosphate dehydrogenase 2 K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D YIM_36120 gpr6; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D YIM_33075 acoA2; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D YIM_35295 acoA3; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D YIM_16845 acoA1; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D YIM_16840 pdhB; Pyruvate dehydrogenase E1 component subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D YIM_33080 bfmBAB; 2-oxoisovalerate dehydrogenase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D YIM_35290 acoB; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D YIM_40365 pvaA; Polyvinylalcohol dehydrogenase precursor K05889 pvadh; polyvinyl alcohol dehydrogenase (cytochrome) [EC:1.1.2.6]
D YIM_00375 L-gulono-1,4-lactone dehydrogenase K05888 K05888; L-gulono-1,4-lactone dehydrogenase [EC:1.1.2.-]
D YIM_04765 yliI1; Soluble aldose sugar dehydrogenase YliI precursor K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D YIM_33190 fgd13; F420-dependent glucose-6-phosphate dehydrogenase K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2]
D YIM_14365 fgd5; F420-dependent glucose-6-phosphate dehydrogenase K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2]
D YIM_01230 dprE1; putative decaprenylphosphoryl-beta-D-ribose oxidase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D YIM_33555 ddn6; Deazaflavin-dependent nitroreductase K00540 fqr; F420H(2)-dependent quinone reductase [EC:1.1.98.-]
D YIM_00955 acr1; Fatty acyl-CoA reductase K11168 DHRS12; dehydrogenase/reductase SDR family member 12 [EC:1.1.-.-]
D YIM_22395 gpr4; L-glyceraldehyde 3-phosphate reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D YIM_22120 yhdN8; General stress protein 69 K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D YIM_19275 ndhS2; Nicotinate dehydrogenase small FeS subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D YIM_10470 cutS1; Carbon monoxide dehydrogenase small chain K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D YIM_11195 ndhS1; Nicotinate dehydrogenase small FeS subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D YIM_29110 kdhA; 6-hydroxypseudooxynicotine dehydrogenase complex subunit alpha K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D YIM_10480 cutM; Carbon monoxide dehydrogenase medium chain K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D YIM_10475 cutL; Carbon monoxide dehydrogenase large chain K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D YIM_29105 cdhA; Caffeine dehydrogenase subunit alpha K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D YIM_15775 2-oxoacid ferredoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D YIM_02945 fadH; 2,4-dienoyl-CoA reductase [NADPH] K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D YIM_06040 pqqC; Pyrroloquinoline-quinone synthase K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D YIM_01670 iorA1; Isoquinoline 1-oxidoreductase subunit alpha K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D YIM_22005 iorA2; Isoquinoline 1-oxidoreductase subunit alpha K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D YIM_26170 iorA3; Isoquinoline 1-oxidoreductase subunit alpha K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D YIM_01675 iorB1; Isoquinoline 1-oxidoreductase subunit beta K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D YIM_22000 iorB2; Isoquinoline 1-oxidoreductase subunit beta K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D YIM_26165 iorB3; Isoquinoline 1-oxidoreductase subunit beta K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D YIM_45130 Putative oxidoreductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D YIM_13810 acdA5; Acyl-CoA dehydrogenase K22818 fadE26; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase alpha subunit [EC:1.3.99.-]
D YIM_13805 acdA4; Acyl-CoA dehydrogenase K22819 fadE27; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase beta subunit [EC:1.3.99.-]
D YIM_14375 bbsG1; (R)-benzylsuccinyl-CoA dehydrogenase K22820 fadE34; 3-oxochol-4-en-24-oyl-CoA dehydrogenase [EC:1.3.99.-]
D YIM_14395 mmgC7; Acyl-CoA dehydrogenase K22821 fadE28; 3-oxo-4-pregnene-20-carboxyl-CoA dehydrogenase alpha subunit [EC:1.3.99.-]
D YIM_14400 mmgC8; Acyl-CoA dehydrogenase K22822 fadE29; 3-oxo-4-pregnene-20-carboxyl-CoA dehydrogenase beta subunit [EC:1.3.99.-]
D YIM_18090 NADP oxidoreductase coenzyme F420-dependent K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D YIM_23275 NADP oxidoreductase coenzyme F420-dependent K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D YIM_43045 lpdA; NAD(P)H dehydrogenase (quinone) K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D YIM_17915 qorA7; Quinone oxidoreductase 1 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D YIM_05790 qorA5; Quinone oxidoreductase 1 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D YIM_18110 qorA8; Quinone oxidoreductase 1 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D YIM_04205 qorA3; Quinone oxidoreductase 1 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D YIM_08385 hypothetical protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D YIM_04620 qorA4; Quinone oxidoreductase 1 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D YIM_37595 qorA12; Quinone oxidoreductase 1 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D YIM_16150 adhT4; Alcohol dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D YIM_16890 eryA4; Erythronolide synthase, modules 3 and 4 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D YIM_44445 azoR2; FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D YIM_13690 azoR1; FMN-dependent NADH-azoreductase 1 K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D YIM_11805 mtr; Mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D YIM_00615 msrA1; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D YIM_16460 msrA2; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D YIM_30945 msrB; Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D YIM_19170 yqjG; Glutathionyl-hydroquinone reductase YqjG K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D YIM_33510 ydbD; putative manganese catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D YIM_45470 ydjP2; AB hydrolase superfamily protein YdjP K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D YIM_23635 ydjP1; AB hydrolase superfamily protein YdjP K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D YIM_41590 bcp2; Putative peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D YIM_18300 bcp1; Putative peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D YIM_02105 ohrB1; Organic hydroperoxide resistance protein OhrB K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D YIM_16640 ohrB2; Organic hydroperoxide resistance protein OhrB K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D YIM_26480 ohrB3; Organic hydroperoxide resistance protein OhrB K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D YIM_12040 Putative peroxiredoxin K24120 ahpE; mycoredoxin-dependent peroxiredoxin [EC:1.11.1.29]
D YIM_18735 yhhW; Quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D YIM_18850 lcp1; Latex clearing protein precursor K23117 lcp; endo-cleaving rubber dioxygenase [EC:1.13.11.87]
D YIM_34625 lcp2; Latex clearing protein precursor K23117 lcp; endo-cleaving rubber dioxygenase [EC:1.13.11.87]
D YIM_41650 Cysteine dioxygenase type I K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91]
D YIM_47830 Carotenoid cleavage oxygenase K11159 K11159; carotenoid cleavage oxygenase [EC:1.13.11.-]
D YIM_25785 asnO3; L-asparagine oxygenase K18058 asnO; L-asparagine oxygenase [EC:1.14.11.39]
D YIM_40220 pvdA; L-ornithine 5-monooxygenase K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196]
D YIM_23125 hsaA3; Flavin-dependent monooxygenase, oxygenase subunit HsaA K22027 iacA; indole-3-acetate monooxygenase [EC:1.14.13.235]
D YIM_30770 iucD; L-lysine N6-monooxygenase K27501 alcA; putrescine N-hydroxylase [EC:1.14.13.252]
D YIM_22805 rebH; Flavin-dependent tryptophan halogenase RebH K22693 pyrH; tryptophan 5-halogenase [EC:1.14.19.58]
D YIM_08095 Chitin binding domain protein K22033 K22033; lytic cellulose monooxygenase (C4-dehydrogenating) [EC:1.14.99.56]
D YIM_19840 gbpA3; GlcNAc-binding protein A K22033 K22033; lytic cellulose monooxygenase (C4-dehydrogenating) [EC:1.14.99.56]
D YIM_02735 mhuD; Heme-degrading monooxygenase HmoB K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57]
D YIM_00155 fprA; NADPH-ferredoxin reductase FprA K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D YIM_05240 yumC; Ferredoxin--NADP reductase 2 K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D YIM_20860 arsC2; Arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D YIM_45505 mrx1; Mycoredoxin 1 K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D YIM_19335 Glutaredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D YIM_16070 arsC1; Arsenate-mycothiol transferase ArsC1 K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D YIM_06030 moaA2; Cyclic pyranopterin monophosphate synthase 1 K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D YIM_33945 pflA; Pyruvate formate-lyase 1-activating enzyme K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D YIM_13930 cfa1; Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D YIM_18290 cfa2; Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D YIM_38000 tam4; Trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D YIM_17000 Geranyl diphosphate 2-C-methyltransferase K16217 gppmt; geranyl diphosphate 2-C-methyltransferase [EC:2.1.1.255]
D YIM_22915 mppJ; Phenylpyruvate C(3)-methyltransferase K21457 mppJ; phenylpyruvate C(3)-methyltransferase [EC:2.1.1.281]
D YIM_25125 tcmN2; Multifunctional cyclase-dehydratase-3-O-methyl transferase TcmN K21460 sfmM2; L-tyrosine C(3)-methyltransferase [EC:2.1.1.304]
D YIM_26440 mycF2; Mycinamicin III 3''-O-methyltransferase K05303 K05303; O-methyltransferase [EC:2.1.1.-]
D YIM_22780 mycF1; Mycinamicin III 3''-O-methyltransferase K05303 K05303; O-methyltransferase [EC:2.1.1.-]
D YIM_33450 novN1; Decarbamoylnovobiocin carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D YIM_14500 maa; Maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D YIM_42075 nat3; Arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D YIM_02925 nat1; Arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D YIM_03700 nat2; Arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D YIM_46265 mshD7; Mycothiol acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D YIM_32850 nphT2; Acetoacetyl CoA synthase NphT7 K21378 nphT7; acetoacetyl-CoA synthase [EC:2.3.1.194]
D YIM_41430 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D YIM_05985 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D YIM_17275 ramA4; (R)-stereoselective amidase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D YIM_25010 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D YIM_38520 hypothetical protein K22797 octT; diglucosylglycerate octanoyltransferase [EC:2.3.1.273]
D YIM_46150 A-factor biosynthesis hotdog domain protein K22463 afsA; 2-oxo-3-(phosphooxy)propyl 3-oxoalkanoate synthase [EC:2.3.1.277]
D YIM_05710 Acetyltransferase (GNAT) family protein K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D YIM_30500 ysnE; putative N-acetyltransferase YsnE K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D YIM_42800 nodA; Nodulation protein A K14658 nodA; nodulation protein A [EC:2.3.1.-]
D YIM_03645 Glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D YIM_29775 Transglutaminase-like superfamily protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D YIM_40545 tgpA2; Protein-glutamine gamma-glutamyltransferase K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D YIM_45465 mshA6; D-inositol 3-phosphate glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D YIM_12890 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D YIM_27990 apbE; Thiamine biosynthesis lipoprotein ApbE precursor K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D YIM_41195 dhaK2; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK K20902 derK; D-erythrulose 4-kinase [EC:2.7.1.210]
D YIM_41180 eryA12; Erythritol kinase K00862 eryA; erythritol kinase (D-erythritol 1-phosphate-forming) [EC:2.7.1.215]
D YIM_26355 hypothetical protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D YIM_10255 DAK2 domain protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D YIM_06645 glnE; Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D YIM_37100 ltrA; Group II intron-encoded protein LtrA K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D YIM_30115 ppsA2; Phosphoenolpyruvate synthase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D YIM_19030 frc3; Formyl-coenzyme A transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D YIM_14140 Thermostable monoacylglycerol lipase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D YIM_34375 cex2; Exoglucanase/xylanase precursor K05972 AXE1; acetylxylan esterase [EC:3.1.1.72]
D YIM_37735 pnbA2; Para-nitrobenzyl esterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D YIM_41280 pnbA3; Para-nitrobenzyl esterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D YIM_46060 pnbA4; Para-nitrobenzyl esterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D YIM_19325 Carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D YIM_32240 Carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D YIM_33330 pnbA1; Para-nitrobenzyl esterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D YIM_34210 Carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D YIM_23690 flK; Fluoroacetyl-CoA thioesterase K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D YIM_37235 Thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D YIM_39100 fadM2; Long-chain acyl-CoA thioesterase FadM K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D YIM_45675 ybgC; Acyl-CoA thioester hydrolase YbgC K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D YIM_06650 Thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D YIM_20940 Thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D YIM_48270 iphP; Tyrosine-protein phosphatase precursor K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D YIM_38525 gpgP2; Glucosyl-3-phosphoglycerate phosphatase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D YIM_42275 hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D YIM_12065 phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D YIM_04660 ycfH; putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D YIM_27085 yokF; SPBc2 prophage-derived endonuclease YokF precursor K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D YIM_06465 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-]
D YIM_05840 xlnA1; Endo-1,4-beta-xylanase A precursor K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D YIM_22465 xynAS3; Endo-1,4-beta-xylanase A precursor K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D YIM_23500 xlnA5; Endo-1,4-beta-xylanase A precursor K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D YIM_26495 xlnB; Endo-1,4-beta-xylanase B precursor K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D YIM_19700 xynAS1; Endo-1,4-beta-xylanase A precursor K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D YIM_20445 abn-ts; Intracellular endo-alpha-(1->5)-L-arabinanase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D YIM_20850 xynC; Glucuronoxylanase XynC precursor K15924 xynC; glucuronoarabinoxylan endo-1,4-beta-xylanase [EC:3.2.1.136]
D YIM_19875 Xyloglucanase precursor K18578 CEL74A; xyloglucan-specific exo-beta-1,4-glucanase [EC:3.2.1.155]
D YIM_37155 yicI; Alpha-xylosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D YIM_27080 exsH; Endo-1,3-1,4-beta-glycanase ExsH K20832 EN3GAL; galactan endo-beta-1,3-galactanase [EC:3.2.1.181]
D YIM_32500 hypothetical protein K27194 mmpH; MMP endo-(1,4)-3-O-methyl-alpha-D-mannosidase [EC:3.2.1.221]
D YIM_04630 hypothetical protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226]
D YIM_44690 D-alanyl-D-alanine carboxypeptidase precursor K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D YIM_47980 D-alanyl-D-alanine carboxypeptidase precursor K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D YIM_16605 D-alanyl-D-alanine carboxypeptidase precursor K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D YIM_33020 D-alanyl-D-alanine carboxypeptidase precursor K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D YIM_33715 D-alanyl-D-alanine carboxypeptidase precursor K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D YIM_34340 D-alanyl-D-alanine carboxypeptidase precursor K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D YIM_31575 dan; D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D YIM_13065 def2; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D YIM_03345 def1; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D YIM_38660 aac; Aculeacin-A acylase precursor K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D YIM_11610 laaA; L-amino acid amidase K18457 laaA; L-proline amide hydrolase [EC:3.5.1.101]
D YIM_05430 mshB1; 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D YIM_30615 pgdA; Peptidoglycan deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D YIM_05080 mca1; Mycothiol S-conjugate amidase K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D YIM_18950 2-oxoglutaramate amidase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D YIM_12575 ramA3; (R)-stereoselective amidase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D YIM_08745 mshB2; 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D YIM_35525 Protein-arginine deiminase (PAD) K01481 E3.5.3.15; protein-arginine deiminase [EC:3.5.3.15]
D YIM_11200 8-oxoguanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D YIM_31905 yjgH1; RutC family protein YjgH K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D YIM_40555 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D YIM_42050 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D YIM_27600 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D YIM_35680 ravA; ATPase RavA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D YIM_26360 fucA1; L-fuculose phosphate aldolase K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D YIM_14415 lipid-transfer protein K25623 ltp2; 17-hydroxy-3-oxo-4-pregnene-20-carboxyl-CoA lyase [EC:4.1.3.-]
D YIM_43935 nnr; Bifunctional NAD(P)H-hydrate repair enzyme Nnr K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D YIM_14405 hypothetical protein K25621 chsH2; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase alpha subunit [EC:4.2.1.-]
D YIM_14410 hypothetical protein K25622 chsH1; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase beta subunit [EC:4.2.1.-]
D YIM_14790 xly; Xanthan lyase precursor K01727 hysA; hyaluronate lyase [EC:4.2.2.1]
D YIM_20855 yesW1; Rhamnogalacturonan endolyase YesW precursor K18197 yesW; rhamnogalacturonan endolyase [EC:4.2.2.23]
D YIM_32675 yesW2; Rhamnogalacturonan endolyase YesW precursor K18197 yesW; rhamnogalacturonan endolyase [EC:4.2.2.23]
D YIM_16995 2-methylisoborneol synthase K16218 mibs; 2-methylisoborneol synthase [EC:4.2.3.118]
D YIM_00090 tdcB1; L-threonine dehydratase catabolic TdcB K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16]
D YIM_03240 tdcB2; L-threonine dehydratase catabolic TdcB K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16]
D YIM_31790 psdht2; Phenylserine dehydratase K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16]
D YIM_38700 D-tagatose 3-epimerase K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31]
D YIM_39850 rhaM; L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D YIM_14340 scpA2; Methylmalonyl-CoA mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D YIM_25720 pqsA; Anthranilate--CoA ligase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34]
D YIM_14560 Long-chain-fatty-acid--CoA ligase FadD19 K18688 fadD19; 3-oxocholest-4-en-26-oate---CoA ligase [EC:6.2.1.42]
D YIM_04065 sauT; putative sulfoacetate--CoA ligase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48]
D YIM_20575 lcfB2; Long-chain-fatty-acid--CoA ligase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48]
D YIM_30205 Long-chain-fatty-acid--CoA ligase FadD13 K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-]
D YIM_41055 YcaO-like family protein K24411 patD; oxazoline/thiazoline synthase [EC:6.2.2.2 6.2.2.3]
D YIM_27465 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D YIM_18360 accD1; putative propionyl-CoA carboxylase beta chain 5 K01970 accD2; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D YIM_26845 accD3; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D YIM_43865 accA4; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D YIM_18365 accA2; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K27596 accA2; acyl-CoA carboxylase subunit alpha [EC:6.4.1.-]
D YIM_34690 Calcium-transporting ATPase 1 K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
D YIM_22270 ctpF; putative cation-transporting ATPase F K12953 ctpF; cation-transporting P-type ATPase F [EC:7.2.2.-]
D YIM_33230 cadA; putative cadmium-transporting ATPase K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D YIM_13785 acuC; Acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC
D YIM_19705 bglX1; Periplasmic beta-glucosidase precursor K17641 bxlA; beta-xylosidase
D YIM_36945 bglX2; Periplasmic beta-glucosidase precursor K17641 bxlA; beta-xylosidase
C 99982 Energy metabolism
D YIM_19010 formate dehydrogenase accessory protein K02379 fdhD; FdhD protein
D YIM_38785 formate dehydrogenase accessory protein K02379 fdhD; FdhD protein
D YIM_28480 hypothetical protein K05337 fer; ferredoxin
D YIM_34170 Ferredoxin K05337 fer; ferredoxin
D YIM_43215 subB6; Ferredoxin-2 K05337 fer; ferredoxin
D YIM_22135 subB3; Ferredoxin-2 K05337 fer; ferredoxin
D YIM_40665 subB5; Ferredoxin-2 K05337 fer; ferredoxin
D YIM_18170 nifU; NifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D YIM_07585 nirQ; Denitrification regulatory protein NirQ K04748 norQ; nitric oxide reductase NorQ protein
D YIM_09500 etfB; Electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D YIM_47060 aidB; Putative acyl-CoA dehydrogenase AidB K09456 aidB; putative acyl-CoA dehydrogenase
D YIM_38515 DegV domain-containing protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D YIM_02955 putative sulfate transport protein CysZ K06203 cysZ; CysZ protein
D YIM_46850 fosfomycin resistance protein FosB K08234 yaeR; glyoxylase I family protein
D YIM_13965 hypothetical protein K06997 yggS; PLP dependent protein
D YIM_02305 ydaF1; Putative ribosomal N-acetyltransferase YdaF K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D YIM_03545 rpfC; Resuscitation-promoting factor RpfC precursor K21687 rpfA; resuscitation-promoting factor RpfA
D YIM_24980 rpf2; Resuscitation-promoting factor Rpf precursor K21687 rpfA; resuscitation-promoting factor RpfA
D YIM_04665 rpf1; Resuscitation-promoting factor Rpf2 precursor K21688 rpfB; resuscitation-promoting factor RpfB
D YIM_01145 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D YIM_18190 ubiB2; putative protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D YIM_20650 abgT1; p-aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein
D YIM_21325 abgT2; p-aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D YIM_08680 Alpha/beta hydrolase family protein K03932 lpqC; polyhydroxybutyrate depolymerase
D YIM_00265 Pyridoxamine 5'-phosphate oxidase K05558 K05558; pyridoxamine 5'-phosphate oxidase family protein
D YIM_25840 Pyridoxamine 5'-phosphate oxidase K05558 K05558; pyridoxamine 5'-phosphate oxidase family protein
D YIM_35155 Pyridoxamine 5'-phosphate oxidase K05558 K05558; pyridoxamine 5'-phosphate oxidase family protein
D YIM_35865 azr2; FMN-dependent NADPH-azoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D YIM_45905 hypothetical protein K24913 ramS; lanthionine-containing peptide SapB
D YIM_11665 hypothetical protein K24913 ramS; lanthionine-containing peptide SapB
D YIM_45910 pknH6; Serine/threonine-protein kinase PknH K24914 ramC; probable SapB synthase
C 99999 Others
D YIM_03125 mhqO; Putative ring-cleaving dioxygenase MhqO K15975 K15975; glyoxalase family protein
D YIM_42655 catD10; Putative oxidoreductase CatD K15977 K15977; putative oxidoreductase
D YIM_09630 mhqP; Putative oxidoreductase MhqP K15977 K15977; putative oxidoreductase
D YIM_47305 DoxX K15977 K15977; putative oxidoreductase
D YIM_29815 DoxX K15977 K15977; putative oxidoreductase
D YIM_03130 mhqD; Putative hydrolase MhqD K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D YIM_45790 cspA2; putative cold shock protein A K03704 cspA; cold shock protein
D YIM_45875 csp2; Cold shock protein K03704 cspA; cold shock protein
D YIM_03395 cspC; Cold shock protein CspC K03704 cspA; cold shock protein
D YIM_03630 csp1; Cold shock-like protein K03704 cspA; cold shock protein
D YIM_23420 cspA1; putative cold shock protein A K03704 cspA; cold shock protein
D YIM_40235 cspD; Cold shock-like protein CspD K03704 cspA; cold shock protein
D YIM_01655 hypothetical protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D YIM_41695 clpS; ATP-dependent Clp protease adapter protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D YIM_38820 tig; Trigger factor K03545 tig; trigger factor
D YIM_03855 ureF; Urease accessory protein UreF K03188 ureF; urease accessory protein
D YIM_03860 ureG; Urease accessory protein UreG K03189 ureG; urease accessory protein
D YIM_03865 ureD; Urease accessory protein UreD K03190 ureD; urease accessory protein
D YIM_06780 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D YIM_11380 comM; Competence protein ComM K07391 comM; magnesium chelatase family protein
D YIM_45230 ccsB; Cytochrome c biogenesis protein CcsB K07399 resB; cytochrome c biogenesis protein
D YIM_10465 pucA; putative xanthine dehydrogenase subunit A K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D YIM_42105 ogt5; Methylated-DNA--protein-cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D YIM_05290 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D YIM_37095 recombination protein F K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D YIM_11370 hypothetical protein K07460 yraN; putative endonuclease
D YIM_27350 PD-(D/E)XK nuclease superfamily protein K07465 K07465; putative RecB family exonuclease
D YIM_42265 PD-(D/E)XK nuclease superfamily protein K07465 K07465; putative RecB family exonuclease
D YIM_11385 hypothetical protein K04096 smf; DNA processing protein
D YIM_17610 rarA; Replication-associated recombination protein A K07478 ycaJ; putative ATPase
D YIM_07230 hypothetical protein K07483 K07483; transposase
D YIM_32115 xerD3; Tyrosine recombinase XerD K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D YIM_35745 PspA/IM30 family protein K03969 pspA; phage shock protein A
D YIM_01960 Nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
D YIM_12550 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D YIM_27875 yjmB; putative symporter YjmB K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D YIM_39750 yhdG7; putative amino acid permease YhdG K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D YIM_38400 yhdG6; putative amino acid permease YhdG K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D YIM_05510 yhdG2; putative amino acid permease YhdG K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D YIM_14570 yhdG5; putative amino acid permease YhdG K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D YIM_08705 yhdG3; putative amino acid permease YhdG K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D YIM_28650 citN; Citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D YIM_02250 dtpT1; Di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D YIM_06640 pitA1; Low-affinity inorganic phosphate transporter 1 K03306 TC.PIT; inorganic phosphate transporter, PiT family
D YIM_26095 pitA2; Low-affinity inorganic phosphate transporter 1 K03306 TC.PIT; inorganic phosphate transporter, PiT family
D YIM_47355 yodF; putative symporter YodF K03307 TC.SSS; solute:Na+ symporter, SSS family
D YIM_06470 sglT1; Sodium/glucose cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D YIM_31100 sglT4; Sodium/glucose cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D YIM_11145 sglT2; Sodium/glucose cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D YIM_08620 Sodium Bile acid symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D YIM_38250 pucI2; putative allantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D YIM_04965 pucI1; putative allantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D YIM_29145 Permease for cytosine/purines, uracil, thiamine, allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
C 99978 Cell growth
D YIM_48280 R3H domain protein K06346 jag; spoIIIJ-associated protein
D YIM_14645 spo0M2; Sporulation-control protein spo0M K06377 spo0M; sporulation-control protein
D YIM_00085 spo0M1; Sporulation-control protein spo0M K06377 spo0M; sporulation-control protein
D YIM_47810 hypothetical protein K06400 spoIVCA; site-specific DNA recombinase
D YIM_48660 hypothetical protein K06400 spoIVCA; site-specific DNA recombinase
D YIM_32180 Recombinase K06400 spoIVCA; site-specific DNA recombinase
D YIM_13220 hypothetical protein K06400 spoIVCA; site-specific DNA recombinase
C 99993 Cell motility
C 99995 Signaling proteins
D YIM_05395 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D YIM_38205 ybeZ2; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D YIM_05145 ybeZ1; PhoH-like protein K07175 phoH2; PhoH-like ATPase
D YIM_44805 putative nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D YIM_13520 acm2; Lysozyme M1 precursor K07273 acm; lysozyme
D YIM_41565 acm3; Lysozyme M1 precursor K07273 acm; lysozyme
D YIM_47745 acm6; Lysozyme M1 precursor K07273 acm; lysozyme
D YIM_48360 acm7; Lysozyme M1 precursor K07273 acm; lysozyme
D YIM_18815 tqsA1; AI-2 transport protein TqsA K11744 tqsA; AI-2 transport protein TqsA
D YIM_30070 gvpA2; Gas vesicle structural protein K23262 gvpA; gas vesicle structural protein
C 99994 Others
D YIM_46185 hypothetical protein K02039 phoU; phosphate transport system protein
D YIM_18560 hypothetical protein K02039 phoU; phosphate transport system protein
D YIM_47805 cutA3; Divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D YIM_00835 cutA1; Divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D YIM_28945 cutA2; Divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D YIM_03465 cutC; Copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D YIM_09805 czcO1; putative oxidoreductase CzcO K07222 K07222; putative flavoprotein involved in K+ transport
B
B 09194 Poorly characterized
C 99996 General function prediction only
D YIM_11820 putative acyltransferase K02348 elaA; ElaA protein
D YIM_39920 polX; DNA polymerase/3'-5' exonuclease PolX K04477 ycdX; putative hydrolase
D YIM_06025 pqqB; Coenzyme PQQ synthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D YIM_06035 pqqD; Coenzyme PQQ synthesis protein D K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D YIM_02395 putative ATP-dependent helicase Lhr K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D YIM_39070 glbO; Group 2 truncated hemoglobin GlbO K06886 glbN; hemoglobin
D YIM_41250 yjbI; Group 2 truncated hemoglobin YjbI K06886 glbN; hemoglobin
D YIM_10080 ydfJ3; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily
D YIM_04120 ydfJ1; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily
D YIM_04535 ydfJ2; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily
D YIM_33850 ydfJ5; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily
D YIM_28995 ydfJ4; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily
D YIM_33650 ydgH2; Putative membrane protein YdgH K06994 K06994; putative drug exporter of the RND superfamily
D YIM_26155 ydgH1; Putative membrane protein YdgH K06994 K06994; putative drug exporter of the RND superfamily
D YIM_36175 ydfJ6; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily
D YIM_38320 mmpL8; Membrane transport protein mmpL8 K06994 K06994; putative drug exporter of the RND superfamily
D YIM_12145 rssA; NTE family protein RssA K07001 K07001; NTE family protein
D YIM_00270 Patatin-like phospholipase K07001 K07001; NTE family protein
D YIM_26650 Patatin-like phospholipase K07001 K07001; NTE family protein
D YIM_09725 yjjG; Pyrimidine 5'-nucleotidase YjjG K07025 K07025; putative hydrolase of the HAD superfamily
D YIM_46620 Phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D YIM_18150 sufB; FeS cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D YIM_18155 sufD; FeS cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D YIM_43385 yhjD2; Inner membrane protein YhjD K07058 K07058; membrane protein
D YIM_41275 yhjD1; Inner membrane protein YhjD K07058 K07058; membrane protein
D YIM_14660 ribonuclease BN/unknown domain fusion protein K07058 K07058; membrane protein
D YIM_23610 hypothetical protein K07058 K07058; membrane protein
D YIM_07960 Putative phosphoribosyl transferase K07100 K07100; putative phosphoribosyl transferase
D YIM_19580 Putative phosphoribosyl transferase K07100 K07100; putative phosphoribosyl transferase
D YIM_47270 phage T7 F exclusion suppressor FxsA K07113 fxsA; UPF0716 protein FxsA
D YIM_07695 hypothetical protein K04750 phnB; PhnB protein
D YIM_24100 hypothetical protein K04750 phnB; PhnB protein
D YIM_20160 hypothetical protein K04750 phnB; PhnB protein
D YIM_24525 Glyoxalase-like domain protein K04750 phnB; PhnB protein
D YIM_31050 chiA4; Chitinase A1 precursor K03933 cpbD; chitin-binding protein
D YIM_46800 yqjA2; Inner membrane protein YqjA K03975 dedA; membrane-associated protein
D YIM_46845 yghB2; Inner membrane protein YghB K03975 dedA; membrane-associated protein
D YIM_12160 yohD2; Inner membrane protein YohD K03975 dedA; membrane-associated protein
D YIM_28280 yghB1; Inner membrane protein YghB K03975 dedA; membrane-associated protein
D YIM_32020 smc6; Chromosome partition protein Smc K01421 yhgE; putative membrane protein
D YIM_10330 yidH; Inner membrane protein YidH K00389 yidH; putative membrane protein
D YIM_22735 Bacterial membrane flanked domain protein K08981 K08981; putative membrane protein
D YIM_36045 Bacterial membrane flanked domain protein K08981 K08981; putative membrane protein
D YIM_01610 yjdF; Inner membrane protein YjdF K08984 yjdF; putative membrane protein
D YIM_12790 hypothetical protein K08987 K08987; putative membrane protein
D YIM_41880 hypothetical protein K08995 K08995; putative membrane protein
D YIM_40685 hypothetical protein K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D YIM_27810 Ankyrin repeats (3 copies) K06867 K06867; uncharacterized protein
D YIM_24040 Ankyrin repeats (3 copies) K06867 K06867; uncharacterized protein
D YIM_37400 HD domain protein K06885 K06885; uncharacterized protein
D YIM_05100 hypothetical protein K06888 K06888; uncharacterized protein
D YIM_01370 Alpha/beta hydrolase family protein K06889 K06889; uncharacterized protein
D YIM_09875 Alpha/beta hydrolase family protein K06889 K06889; uncharacterized protein
D YIM_23255 Alpha/beta hydrolase family protein K06889 K06889; uncharacterized protein
D YIM_32985 Alpha/beta hydrolase family protein K06889 K06889; uncharacterized protein
D YIM_35970 Alpha/beta hydrolase family protein K06889 K06889; uncharacterized protein
D YIM_30220 Alpha/beta hydrolase family protein K06889 K06889; uncharacterized protein
D YIM_22175 Alpha/beta hydrolase family protein K06889 K06889; uncharacterized protein
D YIM_15030 putative PhzA/B-like protein K06893 K06893; uncharacterized protein
D YIM_30635 SnoaL-like domain protein K06893 K06893; uncharacterized protein
D YIM_26740 SnoaL-like domain protein K06893 K06893; uncharacterized protein
D YIM_27540 SnoaL-like domain protein K06893 K06893; uncharacterized protein
D YIM_19850 SnoaL-like domain protein K06893 K06893; uncharacterized protein
D YIM_26175 SnoaL-like domain protein K06893 K06893; uncharacterized protein
D YIM_15720 putative PhzA/B-like protein K06893 K06893; uncharacterized protein
D YIM_07240 putative PhzA/B-like protein K06893 K06893; uncharacterized protein
D YIM_29320 SnoaL-like domain protein K06893 K06893; uncharacterized protein
D YIM_11255 hypothetical protein K06929 K06929; uncharacterized protein
D YIM_02995 hypothetical protein K06929 K06929; uncharacterized protein
D YIM_14335 hypothetical protein K06945 K06945; uncharacterized protein
D YIM_03505 hypothetical protein K06945 K06945; uncharacterized protein
D YIM_12715 hypothetical protein K06945 K06945; uncharacterized protein
D YIM_08580 hypothetical protein K06945 K06945; uncharacterized protein
D YIM_08510 hypothetical protein K06945 K06945; uncharacterized protein
D YIM_20175 hypothetical protein K06945 K06945; uncharacterized protein
D YIM_30405 hypothetical protein K06945 K06945; uncharacterized protein
D YIM_37295 hypothetical protein K06945 K06945; uncharacterized protein
D YIM_08990 hypothetical protein K06950 K06950; uncharacterized protein
D YIM_13935 protoporphyrinogen oxidase K06954 K06954; uncharacterized protein
D YIM_11335 hypothetical protein K06960 K06960; uncharacterized protein
D YIM_18730 hypothetical protein K06975 K06975; uncharacterized protein
D YIM_11760 mshD3; Mycothiol acetyltransferase K06976 K06976; uncharacterized protein
D YIM_09895 cocE1; Cocaine esterase K06978 K06978; uncharacterized protein
D YIM_23870 cocE4; Cocaine esterase K06978 K06978; uncharacterized protein
D YIM_19545 cocE2; Cocaine esterase K06978 K06978; uncharacterized protein
D YIM_21055 cocE3; Cocaine esterase K06978 K06978; uncharacterized protein
D YIM_32805 cocE5; Cocaine esterase K06978 K06978; uncharacterized protein
D YIM_32845 cocE6; Cocaine esterase K06978 K06978; uncharacterized protein
D YIM_33100 cocE7; Cocaine esterase K06978 K06978; uncharacterized protein
D YIM_46560 hypothetical protein K06986 K06986; uncharacterized protein
D YIM_41510 Glyoxalase-like domain protein K06991 K06991; uncharacterized protein
D YIM_42845 27 kDa antigen Cfp30B K06996 K06996; uncharacterized protein
D YIM_43040 27 kDa antigen Cfp30B K06996 K06996; uncharacterized protein
D YIM_11430 27 kDa antigen Cfp30B K06996 K06996; uncharacterized protein
D YIM_25200 Glyoxalase-like domain protein K06996 K06996; uncharacterized protein
D YIM_34430 27 kDa antigen Cfp30B K06996 K06996; uncharacterized protein
D YIM_01775 Endonuclease/Exonuclease/phosphatase family protein K07004 K07004; uncharacterized protein
D YIM_10200 Pyridoxamine 5'-phosphate oxidase K07005 K07005; uncharacterized protein
D YIM_36415 Pyridoxamine 5'-phosphate oxidase K07005 K07005; uncharacterized protein
D YIM_16180 Pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein
D YIM_12765 Pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein
D YIM_34870 Pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein
D YIM_34955 Pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein
D YIM_05615 Alpha/beta hydrolase family protein K07020 K07020; uncharacterized protein
D YIM_34685 Glyoxalase-like domain protein K07032 K07032; uncharacterized protein
D YIM_39355 yaaH; Inner membrane protein YaaH K07034 K07034; uncharacterized protein
D YIM_14755 putative metal-dependent hydrolase K07044 K07044; uncharacterized protein
D YIM_30255 putative metal-dependent hydrolase K07044 K07044; uncharacterized protein
D YIM_17530 Amidohydrolase K07045 K07045; uncharacterized protein
D YIM_17540 Amidohydrolase K07045 K07045; uncharacterized protein
D YIM_17545 Amidohydrolase K07045 K07045; uncharacterized protein
D YIM_10560 Amidohydrolase K07045 K07045; uncharacterized protein
D YIM_15200 Amidohydrolase K07045 K07045; uncharacterized protein
D YIM_06785 Amidohydrolase K07045 K07045; uncharacterized protein
D YIM_19985 Amidohydrolase K07045 K07045; uncharacterized protein
D YIM_21155 Amidohydrolase K07045 K07045; uncharacterized protein
D YIM_30930 Amidohydrolase K07045 K07045; uncharacterized protein
D YIM_32595 Amidohydrolase K07045 K07045; uncharacterized protein
D YIM_44315 TatD related DNase K07051 K07051; uncharacterized protein
D YIM_42070 Putative neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D YIM_13705 Putative neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D YIM_01310 Putative neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D YIM_38270 Ribonuclease VapC26 K07065 K07065; uncharacterized protein
D YIM_14540 hypothetical protein K07068 K07068; uncharacterized protein
D YIM_29585 hypothetical protein K07068 K07068; uncharacterized protein
D YIM_12200 Epimerase family protein K07071 K07071; uncharacterized protein
D YIM_43435 Nucleotidyltransferase domain protein K07075 K07075; uncharacterized protein
D YIM_46700 ABC transporter, phosphonate, periplasmic substrate-binding protein K07080 K07080; uncharacterized protein
D YIM_13165 ABC transporter, phosphonate, periplasmic substrate-binding protein K07080 K07080; uncharacterized protein
D YIM_27565 hypothetical protein K07080 K07080; uncharacterized protein
D YIM_38130 putative permease K07089 K07089; uncharacterized protein
D YIM_46565 hypothetical protein K07090 K07090; uncharacterized protein
D YIM_01465 hypothetical protein K07090 K07090; uncharacterized protein
D YIM_16540 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D YIM_33885 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D YIM_20370 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D YIM_35025 hypothetical protein K07090 K07090; uncharacterized protein
D YIM_47545 hypothetical protein K07093 K07093; uncharacterized protein
D YIM_47550 hypothetical protein K07093 K07093; uncharacterized protein
D YIM_18685 hypothetical protein K07095 K07095; uncharacterized protein
D YIM_45825 putative metallophosphoesterase K07098 K07098; uncharacterized protein
D YIM_30435 putative metallophosphoesterase K07098 K07098; uncharacterized protein
D YIM_02135 phosphodiesterase YaeI K07098 K07098; uncharacterized protein
D YIM_02310 xanthine-guanine phosphoribosyltransferase K07101 K07101; uncharacterized protein
D YIM_05005 putative inner membrane protein K07112 K07112; uncharacterized protein
D YIM_01390 hypothetical protein K07118 K07118; uncharacterized protein
D YIM_10660 hypothetical protein K07118 K07118; uncharacterized protein
D YIM_04220 hypothetical protein K07118 K07118; uncharacterized protein
D YIM_46935 putative oxidoreductase K07124 K07124; uncharacterized protein
D YIM_09370 isfD; Sulfoacetaldehyde reductase K07124 K07124; uncharacterized protein
D YIM_32590 putative oxidoreductase K07124 K07124; uncharacterized protein
D YIM_14325 Roadblock/LC7 domain protein K07131 K07131; uncharacterized protein
D YIM_03495 Roadblock/LC7 domain protein K07131 K07131; uncharacterized protein
D YIM_03510 Roadblock/LC7 domain protein K07131 K07131; uncharacterized protein
D YIM_12720 Roadblock/LC7 domain protein K07131 K07131; uncharacterized protein
D YIM_08570 Roadblock/LC7 domain protein K07131 K07131; uncharacterized protein
D YIM_23840 Roadblock/LC7 domain protein K07131 K07131; uncharacterized protein
D YIM_46570 hypothetical protein K07140 K07140; MOSC domain-containing protein
D YIM_08055 hypothetical protein K07148 K07148; uncharacterized protein
D YIM_12475 lon2; Lon protease K07157 K07157; uncharacterized protein
D YIM_10460 VWA domain containing CoxE-like protein K07161 K07161; uncharacterized protein
D YIM_41995 Putative zinc ribbon domain protein K07164 K07164; uncharacterized protein
D YIM_27755 hypothetical protein K08999 K08999; uncharacterized protein
D YIM_04830 hypothetical protein K09009 K09009; uncharacterized protein
D YIM_06735 hypothetical protein K09118 K09118; uncharacterized protein
D YIM_31910 hypothetical protein K09146 K09146; uncharacterized protein
D YIM_22755 Bacterial membrane flanked domain protein K09167 K09167; uncharacterized protein
D YIM_36050 Bacterial membrane flanked domain protein K09167 K09167; uncharacterized protein
D YIM_29095 Carbon monoxide dehydrogenase subunit G (CoxG) K09386 K09386; uncharacterized protein
D YIM_13940 hypothetical protein K09701 K09701; uncharacterized protein
D YIM_37810 hypothetical protein K09705 K09705; uncharacterized protein
D YIM_35840 hypothetical protein K09707 K09707; uncharacterized protein
D YIM_12675 hypothetical protein K09763 K09763; uncharacterized protein
D YIM_36005 hypothetical protein K09764 K09764; uncharacterized protein
D YIM_46780 YciI-like protein K09780 K09780; uncharacterized protein
D YIM_05475 hypothetical protein K09791 K09791; uncharacterized protein
D YIM_11855 hypothetical protein K09861 K09861; uncharacterized protein
D YIM_35875 hypothetical protein K09927 K09927; uncharacterized protein
D YIM_30965 hypothetical protein K09930 K09930; uncharacterized protein
D YIM_04385 cofC1; 2-phospho-L-lactate guanylyltransferase K09931 K09931; uncharacterized protein
D YIM_15575 Antibiotic biosynthesis monooxygenase K09932 K09932; uncharacterized protein
D YIM_33030 Ricin-type beta-trefoil lectin domain protein K09955 K09955; uncharacterized protein
D YIM_28370 hypothetical protein K09958 K09958; uncharacterized protein
D YIM_04565 hypothetical protein K09959 K09959; uncharacterized protein
D YIM_14820 hypothetical protein K09967 K09967; uncharacterized protein
D YIM_45575 hypothetical protein K09981 K09981; uncharacterized protein
D YIM_15170 hypothetical protein K09990 K09990; uncharacterized protein
D YIM_26090 Putative pit accessory protein K07220 K07220; uncharacterized protein
D YIM_36015 hypothetical protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 10, 2024