+D GENES KO #

  KEGG Orthology (KO) - Amygdalobacter nucleatus

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:anq00010] D PYS63_03415 hypothetical protein K00844 HK; hexokinase [EC:2.7.1.1] D PYS63_03300 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PYS63_03605 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PYS63_00415 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D PYS63_01445 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PYS63_02175 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PYS63_05720 tpiA; triose-phosphate isomerase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PYS63_02565 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PYS63_00180 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PYS63_06880 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PYS63_02430 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PYS63_02520 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D PYS63_05715 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D PYS63_02530 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D PYS63_01690 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PYS63_04150 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D PYS63_03590 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PYS63_04955 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PYS63_05935 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] C 00020 Citrate cycle (TCA cycle) [PATH:anq00020] D PYS63_02905 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D PYS63_05715 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:anq00030] D PYS63_03300 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PYS63_03575 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D PYS63_04870 transketolase C-terminal domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PYS63_00105 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D PYS63_04415 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D PYS63_03590 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PYS63_04955 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PYS63_03095 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PYS63_03100 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PYS63_01870 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D PYS63_01445 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PYS63_02175 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PYS63_03605 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PYS63_00415 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:anq00040] D PYS63_01875 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D PYS63_01885 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D PYS63_01880 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D PYS63_06435 hypothetical protein K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D PYS63_03575 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D PYS63_04570 FGGY family carbohydrate kinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D PYS63_04565 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3] D PYS63_04560 L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:anq00051] D PYS63_04625 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D PYS63_04565 L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3] D PYS63_04560 L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D PYS63_04570 FGGY family carbohydrate kinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D PYS63_03415 hypothetical protein K00844 HK; hexokinase [EC:2.7.1.1] D PYS63_03605 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PYS63_00415 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D PYS63_01445 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PYS63_02175 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PYS63_05720 tpiA; triose-phosphate isomerase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PYS63_00105 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:anq00052] D PYS63_04150 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D PYS63_06030 galactokinase family protein K00849 galK; galactokinase [EC:2.7.1.6] D PYS63_00955 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D PYS63_03185 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PYS63_03590 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PYS63_04955 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PYS63_03415 hypothetical protein K00844 HK; hexokinase [EC:2.7.1.1] D PYS63_01615 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D PYS63_03235 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D PYS63_00460 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D PYS63_03605 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PYS63_00415 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00053 Ascorbate and aldarate metabolism D PYS63_06435 hypothetical protein K01195 uidA; beta-glucuronidase [EC:3.2.1.31] C 00500 Starch and sucrose metabolism [PATH:anq00500] D PYS63_03005 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D PYS63_03015 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D PYS63_03055 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D PYS63_01495 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component D PYS63_03020 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component D PYS63_03050 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component D PYS63_02545 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D PYS63_02550 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D PYS63_02555 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D PYS63_02970 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D PYS63_05625 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D PYS63_05620 pulA; type I pullulanase K01200 pulA; pullulanase [EC:3.2.1.41] D PYS63_02365 alpha amylase N-terminal ig-like domain-containing protein K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D PYS63_02660 glycoside hydrolase family 13 protein K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D PYS63_06570 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D PYS63_00090 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6] D PYS63_01675 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6] D PYS63_05935 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PYS63_04430 alpha-amylase family glycosyl hydrolase K00701 cgt; cyclomaltodextrin glucanotransferase [EC:2.4.1.19] D PYS63_03590 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PYS63_04955 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PYS63_03415 hypothetical protein K00844 HK; hexokinase [EC:2.7.1.1] D PYS63_03300 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PYS63_04625 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:anq00520] D PYS63_05935 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PYS63_03650 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D PYS63_03615 hypothetical protein K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D PYS63_04925 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D PYS63_03415 hypothetical protein K00844 HK; hexokinase [EC:2.7.1.1] D PYS63_04625 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D PYS63_01770 NTP transferase domain-containing protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D PYS63_05300 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PYS63_02675 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D PYS63_03590 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PYS63_04955 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PYS63_06030 galactokinase family protein K00849 galK; galactokinase [EC:2.7.1.6] D PYS63_00955 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D PYS63_03185 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PYS63_03235 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D PYS63_03300 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PYS63_02545 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D PYS63_02550 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:anq00620] D PYS63_05715 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D PYS63_05185 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D PYS63_02530 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D PYS63_00490 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D PYS63_00485 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D PYS63_02430 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PYS63_01690 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PYS63_04740 spxB; pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3] D PYS63_04100 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D PYS63_02900 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D PYS63_02050 pyruvate carboxylase subunit B K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D PYS63_02070 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D PYS63_02905 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D PYS63_02520 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:anq00630] D PYS63_06550 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D PYS63_01390 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PYS63_01380 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D PYS63_02705 fucO; lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] D PYS63_01870 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] C 00640 Propanoate metabolism [PATH:anq00640] D PYS63_01690 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PYS63_00490 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D PYS63_00485 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D PYS63_05185 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D PYS63_03135 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D PYS63_02705 fucO; lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] C 00650 Butanoate metabolism [PATH:anq00650] D PYS63_02530 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D PYS63_02070 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D PYS63_02065 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D PYS63_05185 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D PYS63_05715 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D PYS63_04105 NAD(P)-dependent alcohol dehydrogenase K23259 adh; isopropanol dehydrogenase (NADP+) [EC:1.1.1.80] C 00660 C5-Branched dibasic acid metabolism C 00562 Inositol phosphate metabolism [PATH:anq00562] D PYS63_06520 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PYS63_05720 tpiA; triose-phosphate isomerase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:anq00190] D PYS63_04210 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D PYS63_04200 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D PYS63_04205 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D PYS63_04195 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D PYS63_04230 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D PYS63_04220 ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D PYS63_04225 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D PYS63_00880 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D PYS63_00885 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D PYS63_00870 V-type ATPase subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D PYS63_00890 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D PYS63_00875 V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D PYS63_00855 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D PYS63_00860 V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D PYS63_01800 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:anq00680] D PYS63_06880 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PYS63_01445 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PYS63_02175 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D PYS63_03605 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PYS63_00415 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D PYS63_00490 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D PYS63_00485 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D PYS63_00180 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism [PATH:anq00910] D PYS63_01390 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PYS63_05345 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism D PYS63_06240 DHH family phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:anq00061] D PYS63_03450 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D PYS63_03745 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PYS63_01605 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYS63_06020 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYS63_06580 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:anq00071] D PYS63_01605 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYS63_06020 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYS63_06580 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYS63_02530 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:anq00561] D PYS63_01380 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D PYS63_03165 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PYS63_05745 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PYS63_00460 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:anq00564] D PYS63_03165 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PYS63_05745 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PYS63_03865 CDP-archaeol synthase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D PYS63_03445 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:anq00600] D PYS63_01615 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D PYS63_00460 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:anq00230] D PYS63_04330 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D PYS63_03590 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PYS63_04955 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PYS63_03095 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PYS63_03100 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PYS63_04250 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D PYS63_06500 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D PYS63_03075 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D PYS63_04060 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D PYS63_02835 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D PYS63_02180 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D PYS63_02330 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D PYS63_04730 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PYS63_04945 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7] D PYS63_05950 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D PYS63_04490 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PYS63_04500 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D PYS63_03365 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D PYS63_00375 dgt; dNTP triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D PYS63_05410 yfbR; 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D PYS63_05250 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D PYS63_06725 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D PYS63_05345 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:anq00240] D PYS63_00995 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D PYS63_01000 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D PYS63_01005 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D PYS63_01020 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D PYS63_01015 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D PYS63_01025 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D PYS63_01010 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D PYS63_03885 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D PYS63_03160 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D PYS63_00085 NUDIX domain-containing protein K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65] D PYS63_04235 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D PYS63_03365 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D PYS63_04490 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PYS63_04500 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D PYS63_05410 yfbR; 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D PYS63_02400 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D PYS63_05790 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D PYS63_03315 aminotransferase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PYS63_01790 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:anq00250] D PYS63_05990 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D PYS63_02145 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D PYS63_05995 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PYS63_03290 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D PYS63_00995 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D PYS63_01000 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D PYS63_01390 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] C 00260 Glycine, serine and threonine metabolism [PATH:anq00260] D PYS63_01380 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D PYS63_00180 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PYS63_00185 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] C 00270 Cysteine and methionine metabolism [PATH:anq00270] D PYS63_00495 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PYS63_01515 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PYS63_04160 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PYS63_06495 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D PYS63_01355 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C 00280 Valine, leucine and isoleucine degradation D PYS63_04535 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] C 00290 Valine, leucine and isoleucine biosynthesis C 00300 Lysine biosynthesis [PATH:anq00300] D PYS63_00360 Mur ligase family protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D PYS63_06200 Mur ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation C 00220 Arginine biosynthesis [PATH:anq00220] D PYS63_05350 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D PYS63_02110 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D PYS63_01390 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PYS63_05345 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00330 Arginine and proline metabolism D PYS63_03835 proline-specific peptidase family protein K01259 pip; proline iminopeptidase [EC:3.4.11.5] D PYS63_04865 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] C 00340 Histidine metabolism C 00350 Tyrosine metabolism D PYS63_02530 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00360 Phenylalanine metabolism C 00380 Tryptophan metabolism C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism [PATH:anq00430] D PYS63_00485 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D PYS63_00490 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:anq00450] D PYS63_00495 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PYS63_01515 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PYS63_05370 aminotransferase class V-fold PLP-dependent enzyme K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D PYS63_06015 FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D PYS63_06340 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D PYS63_03280 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D PYS63_02145 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] C 00470 D-Amino acid metabolism [PATH:anq00470] D PYS63_06870 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D PYS63_00035 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PYS63_02585 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D PYS63_05990 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 00480 Glutathione metabolism [PATH:anq00480] D PYS63_01680 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D PYS63_01590 M1 family metallopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:anq00511] D PYS63_01615 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D PYS63_00455 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D PYS63_01490 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D PYS63_04585 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:anq00541] D PYS63_03185 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PYS63_03235 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D PYS63_01770 NTP transferase domain-containing protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:anq00550] D PYS63_05300 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PYS63_02675 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D PYS63_03085 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D PYS63_02585 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D PYS63_02580 hypothetical protein K23170 murL; UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L-glutamate epimerase [EC:5.1.1.23] D PYS63_00360 Mur ligase family protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D PYS63_00035 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PYS63_06200 Mur ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D PYS63_03870 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D PYS63_04735 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D PYS63_06195 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D PYS63_06185 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D PYS63_02395 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PYS63_05575 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PYS63_06560 MurT ligase domain-containing protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D PYS63_06555 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:anq00552] D PYS63_04735 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:anq00730] D PYS63_02890 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PYS63_03800 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PYS63_03795 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PYS63_05520 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D PYS63_03805 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D PYS63_01030 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D PYS63_06725 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism D PYS63_04330 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:anq00750] D PYS63_06515 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] C 00760 Nicotinate and nicotinamide metabolism [PATH:anq00760] D PYS63_03270 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D PYS63_06500 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D PYS63_02850 adenylyltransferase/cytidyltransferase family protein K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D PYS63_02165 nadE; NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D PYS63_02725 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D PYS63_05515 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:anq00770] D PYS63_00325 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D PYS63_04930 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D PYS63_04935 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D PYS63_00060 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D PYS63_05220 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D PYS63_04790 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] C 00780 Biotin metabolism [PATH:anq00780] D PYS63_03745 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PYS63_02010 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism C 00790 Folate biosynthesis [PATH:anq00790] D PYS63_01795 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] C 00670 One carbon pool by folate [PATH:anq00670] D PYS63_01795 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D PYS63_02930 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D PYS63_04320 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D PYS63_03825 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D PYS63_01790 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:anq00860] D PYS63_00550 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PYS63_04970 radical SAM protein K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D PYS63_06435 hypothetical protein K01195 uidA; beta-glucuronidase [EC:3.2.1.31] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:anq00900] D PYS63_05520 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D PYS63_03860 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D PYS63_06330 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D PYS63_06345 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D PYS63_03850 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D PYS63_03170 bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D PYS63_05525 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D PYS63_03870 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D PYS63_04870 transketolase C-terminal domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures [PATH:anq01054] D PYS63_05990 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:anq00521] D PYS63_03415 hypothetical protein K00844 HK; hexokinase [EC:2.7.1.1] D PYS63_03590 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PYS63_04955 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D PYS63_06520 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D PYS63_03415 hypothetical protein K00844 HK; hexokinase [EC:2.7.1.1] C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D PYS63_03745 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D PYS63_03450 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D PYS63_04160 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D PYS63_02070 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D PYS63_02065 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:anq00625] D PYS63_02530 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:anq00626] D PYS63_02530 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:anq03020] D PYS63_00265 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PYS63_06690 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PYS63_00920 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D PYS63_05680 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:anq03010] D PYS63_03170 bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D PYS63_03895 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D PYS63_06800 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D PYS63_03330 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D PYS63_06745 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D PYS63_02985 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D PYS63_05285 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D PYS63_06760 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D PYS63_05820 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D PYS63_06835 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D PYS63_06695 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D PYS63_05290 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D PYS63_06700 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D PYS63_06765 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D PYS63_03175 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D PYS63_03500 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D PYS63_06785 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D PYS63_02995 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D PYS63_06810 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D PYS63_02800 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D PYS63_05205 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D PYS63_02625 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D PYS63_06815 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D PYS63_06830 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D PYS63_06825 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D PYS63_06770 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D PYS63_06755 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D PYS63_02635 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D PYS63_03060 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D PYS63_02630 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D PYS63_02620 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D PYS63_05825 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D PYS63_06780 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D PYS63_06735 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D PYS63_06795 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D PYS63_06685 L17 family ribosomal protein K02879 RP-L17; large subunit ribosomal protein L17 D PYS63_06750 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D PYS63_03555 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D PYS63_04260 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D PYS63_05920 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D PYS63_06805 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D PYS63_06820 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D PYS63_06775 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D PYS63_05910 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D PYS63_04745 L28 family ribosomal protein K02902 RP-L28; large subunit ribosomal protein L28 D PYS63_06790 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D PYS63_06740 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D PYS63_02500 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D PYS63_06110 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D PYS63_02605 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D PYS63_05475 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D PYS63_04265 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D PYS63_06705 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D PYS63_05315 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:anq00970] D PYS63_00550 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PYS63_00555 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PYS63_03260 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PYS63_03390 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PYS63_03125 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PYS63_00925 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D PYS63_06315 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PYS63_02690 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PYS63_04140 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PYS63_03280 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PYS63_03825 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D PYS63_03640 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PYS63_00825 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PYS63_03140 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PYS63_04050 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PYS63_02820 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PYS63_05815 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PYS63_03385 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PYS63_04855 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PYS63_04850 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PYS63_05885 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PYS63_02410 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:anq03060] D PYS63_06730 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PYS63_02610 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D PYS63_05170 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D PYS63_05260 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein D PYS63_05055 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D PYS63_04825 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PYS63_03495 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PYS63_03470 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D PYS63_03395 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D PYS63_02250 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:anq04122] D PYS63_02890 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PYS63_03800 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PYS63_02885 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D PYS63_03795 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] C 03050 Proteasome C 03018 RNA degradation [PATH:anq03018] D PYS63_06880 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PYS63_05165 VacB/RNase II family 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1] D PYS63_02495 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D PYS63_05495 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D PYS63_03605 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PYS63_06930 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D PYS63_03195 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] B B 09124 Replication and repair C 03030 DNA replication [PATH:anq03030] D PYS63_03595 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PYS63_03845 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D PYS63_06365 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PYS63_05780 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PYS63_03115 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PYS63_00220 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PYS63_03065 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PYS63_05040 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D PYS63_02990 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PYS63_04335 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D PYS63_03565 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D PYS63_03660 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:anq03410] D PYS63_01035 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PYS63_05105 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D PYS63_03355 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D PYS63_00080 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D PYS63_05255 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PYS63_03660 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:anq03420] D PYS63_01780 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D PYS63_05145 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D PYS63_03585 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D PYS63_00275 excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D PYS63_03520 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PYS63_05415 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PYS63_03660 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PYS63_05680 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03430 Mismatch repair [PATH:anq03430] D PYS63_03755 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D PYS63_03610 Smr/MutS family protein K07456 mutS2; DNA mismatch repair protein MutS2 D PYS63_03760 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D PYS63_03520 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PYS63_05415 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PYS63_05535 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D PYS63_05530 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D PYS63_05255 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PYS63_02990 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PYS63_03595 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PYS63_03845 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D PYS63_00220 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PYS63_06365 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PYS63_03115 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PYS63_05780 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PYS63_03660 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:anq03440] D PYS63_05255 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PYS63_02990 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PYS63_00225 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D PYS63_06375 recR; recombination mediator RecR K06187 recR; recombination protein RecR D PYS63_03435 recA; recombinase RecA K03553 recA; recombination protein RecA D PYS63_04390 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D PYS63_04385 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D PYS63_04395 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D PYS63_00075 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D PYS63_00650 ATP-binding protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D PYS63_01810 ATP-binding protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D PYS63_03595 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PYS63_03845 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D PYS63_00220 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PYS63_06365 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PYS63_03115 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PYS63_05780 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PYS63_03840 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:anq02010] D PYS63_00010 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein D PYS63_00520 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D PYS63_01435 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D PYS63_01450 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein D PYS63_01905 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D PYS63_04760 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D PYS63_06955 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein D PYS63_00015 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D PYS63_00525 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D PYS63_01430 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D PYS63_01455 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D PYS63_01915 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D PYS63_04770 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D PYS63_00020 ATP-binding cassette domain-containing protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D PYS63_01425 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D PYS63_01910 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D PYS63_04765 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D PYS63_04775 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D PYS63_06425 ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D PYS63_06420 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D PYS63_06415 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D PYS63_06410 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D PYS63_00530 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PYS63_01460 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PYS63_06865 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PYS63_02370 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D PYS63_05650 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D PYS63_05645 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D PYS63_05640 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D PYS63_05610 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D PYS63_05605 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D PYS63_05600 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D PYS63_02090 extracellular solute-binding protein K10188 lacE; lactose/L-arabinose transport system substrate-binding protein D PYS63_02095 sugar ABC transporter permease K10189 lacF; lactose/L-arabinose transport system permease protein D PYS63_02100 carbohydrate ABC transporter permease K10190 lacG; lactose/L-arabinose transport system permease protein D PYS63_04595 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D PYS63_04545 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D PYS63_04550 ABC transporter permease K10440 rbsC; ribose transport system permease protein D PYS63_04555 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D PYS63_00055 substrate-binding domain-containing protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D PYS63_00045 galactoside ABC transporter permease K10541 mglC; methyl-galactoside transport system permease protein D PYS63_00050 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D PYS63_04455 extracellular solute-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D PYS63_04465 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D PYS63_04460 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D PYS63_04085 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D PYS63_04090 ABC transporter permease K02072 metI; D-methionine transport system permease protein D PYS63_04095 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein D PYS63_02940 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PYS63_02945 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D PYS63_02950 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D PYS63_02955 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D PYS63_02960 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D PYS63_05870 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D PYS63_01760 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D PYS63_02460 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D PYS63_05115 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D PYS63_05860 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D PYS63_01755 ATP-binding cassette domain-containing protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D PYS63_05120 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D PYS63_05865 ATP-binding cassette domain-containing protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D PYS63_02015 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D PYS63_06675 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein D PYS63_01855 substrate-binding domain-containing protein K10555 lsrB; AI-2 transport system substrate-binding protein D PYS63_01845 ABC transporter permease K10556 lsrC; AI-2 transport system permease protein D PYS63_01850 ABC transporter permease K10557 lsrD; AI-2 transport system permease protein D PYS63_01840 sugar ABC transporter ATP-binding protein K10558 lsrA; AI-2 transport system ATP-binding protein D PYS63_06850 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D PYS63_06135 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D PYS63_06140 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D PYS63_03530 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D PYS63_04080 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D PYS63_03525 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D PYS63_04075 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump C 02060 Phosphotransferase system (PTS) [PATH:anq02060] D PYS63_04295 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D PYS63_00270 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D PYS63_04290 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D PYS63_05935 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PYS63_03005 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D PYS63_03015 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D PYS63_03055 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D PYS63_01495 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component D PYS63_03020 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component D PYS63_03050 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component C 03070 Bacterial secretion system [PATH:anq03070] D PYS63_05260 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein D PYS63_02610 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D PYS63_05170 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D PYS63_06730 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PYS63_05055 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D PYS63_04825 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PYS63_03470 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D PYS63_03495 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:anq02020] D PYS63_01940 response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3 D PYS63_02440 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D PYS63_03985 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D PYS63_03980 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D PYS63_01930 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D PYS63_01920 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D PYS63_05240 ATP-binding protein K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3] D PYS63_05305 ATP-binding protein K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D PYS63_05310 response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR D PYS63_00215 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D PYS63_02005 GNAT family N-acetyltransferase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22] D PYS63_02030 citD; citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein) D PYS63_02035 aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D PYS63_02040 citF; citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10] D PYS63_02025 citX; citrate lyase holo-[acyl-carrier protein] synthase K05964 citX; holo-ACP synthase [EC:2.7.7.61] D PYS63_02020 triphosphoribosyl-dephospho-CoA synthase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D PYS63_02900 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D PYS63_04170 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D PYS63_01390 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:anq02024] D PYS63_03980 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D PYS63_01855 substrate-binding domain-containing protein K10555 lsrB; AI-2 transport system substrate-binding protein D PYS63_01845 ABC transporter permease K10556 lsrC; AI-2 transport system permease protein D PYS63_01850 ABC transporter permease K10557 lsrD; AI-2 transport system permease protein D PYS63_01840 sugar ABC transporter ATP-binding protein K10558 lsrA; AI-2 transport system ATP-binding protein D PYS63_01830 lsrK; autoinducer-2 kinase K11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189] D PYS63_01835 sugar-binding transcriptional regulator K11531 lsrR; lsr operon transcriptional repressor D PYS63_01860 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245] D PYS63_01605 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYS63_06020 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYS63_06580 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYS63_02940 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PYS63_02945 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D PYS63_02950 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D PYS63_02955 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D PYS63_02960 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D PYS63_03735 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PYS63_05260 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein D PYS63_02610 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D PYS63_05170 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D PYS63_06730 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PYS63_05055 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D PYS63_04825 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PYS63_03470 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D PYS63_03495 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:anq02030] D PYS63_04545 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D PYS63_00055 substrate-binding domain-containing protein K10540 mglB; methyl-galactoside transport system substrate-binding protein C 02040 Flagellar assembly D PYS63_05035 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D PYS63_06880 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:anq01501] D PYS63_02940 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PYS63_02945 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D PYS63_02950 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D PYS63_02955 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D PYS63_02960 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D PYS63_02395 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01502 Vancomycin resistance [PATH:anq01502] D PYS63_00035 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PYS63_06870 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D PYS63_06200 Mur ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D PYS63_06195 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D PYS63_06185 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance D PYS63_02440 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:anq01000] C 01001 Protein kinases [BR:anq01001] D PYS63_03810 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D PYS63_03985 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D PYS63_05240 ATP-binding protein K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3] D PYS63_05305 ATP-binding protein K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:anq01009] D PYS63_03605 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PYS63_03815 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:anq01002] D PYS63_02250 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D PYS63_00295 C1 family peptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D PYS63_00960 C1 family peptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D PYS63_04510 pcp; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D PYS63_04730 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PYS63_02115 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase D PYS63_05995 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PYS63_03240 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D PYS63_05210 class D sortase K07284 srtA; sortase A [EC:3.4.22.70] D PYS63_04920 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D PYS63_02480 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D PYS63_01590 M1 family metallopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D PYS63_04360 hypothetical protein K07386 pepO; putative endopeptidase [EC:3.4.24.-] D PYS63_01680 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D PYS63_05000 M20/M25/M40 family metallo-hydrolase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D PYS63_06720 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D PYS63_02750 aminopeptidase family protein P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D PYS63_06525 M28 family peptidase K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-] D PYS63_03080 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D PYS63_03855 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D PYS63_02440 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D PYS63_05575 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PYS63_02195 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D PYS63_05270 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D PYS63_03395 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D PYS63_03835 proline-specific peptidase family protein K01259 pip; proline iminopeptidase [EC:3.4.11.5] D PYS63_04865 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D PYS63_06090 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] C 01003 Glycosyltransferases [BR:anq01003] D PYS63_02555 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D PYS63_02395 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:anq01005] D PYS63_00300 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:anq01011] D PYS63_05300 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PYS63_02675 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D PYS63_03085 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D PYS63_02585 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D PYS63_00360 Mur ligase family protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D PYS63_00035 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PYS63_06870 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D PYS63_06195 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D PYS63_06185 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D PYS63_04735 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D PYS63_02730 lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D PYS63_02395 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PYS63_05575 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PYS63_05210 class D sortase K07284 srtA; sortase A [EC:3.4.22.70] D PYS63_06095 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] C 01004 Lipid biosynthesis proteins [BR:anq01004] D PYS63_03745 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PYS63_01690 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PYS63_01605 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYS63_06020 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYS63_06580 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYS63_03165 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PYS63_05745 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:anq01008] D PYS63_05990 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:anq01006] D PYS63_05525 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D PYS63_03870 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D PYS63_03765 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] C 01007 Amino acid related enzymes [BR:anq01007] D PYS63_00550 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PYS63_00555 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PYS63_05885 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PYS63_02410 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PYS63_04140 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PYS63_02820 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PYS63_03280 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PYS63_03140 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PYS63_03640 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PYS63_00825 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PYS63_04050 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PYS63_03390 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PYS63_03125 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PYS63_03385 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PYS63_00925 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D PYS63_02690 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PYS63_05815 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PYS63_06315 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PYS63_03260 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PYS63_04855 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PYS63_04850 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PYS63_00185 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D PYS63_00495 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PYS63_01515 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:anq00194] D PYS63_04195 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D PYS63_04200 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D PYS63_04205 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D PYS63_04210 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D PYS63_04220 ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D PYS63_04225 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D PYS63_04230 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:anq03000] D PYS63_01355 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PYS63_04575 DeoR/GlpR family DNA-binding transcription regulator K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor D PYS63_00435 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PYS63_01420 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PYS63_01650 LacI family DNA-binding transcriptional regulator K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor D PYS63_01745 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D PYS63_01890 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D PYS63_04910 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D PYS63_00750 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D PYS63_01170 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D PYS63_02010 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D PYS63_01375 sugar diacid recognition domain-containing protein K02647 cdaR; carbohydrate diacid regulator D PYS63_06860 helix-turn-helix domain-containing protein K02647 cdaR; carbohydrate diacid regulator D PYS63_04355 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D PYS63_02755 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D PYS63_04725 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D PYS63_06890 helix-turn-helix domain-containing protein K07729 K07729; putative transcriptional regulator D PYS63_00685 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D PYS63_01535 DUF6290 family protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D PYS63_00245 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PYS63_05510 hypothetical protein K03402 argR; transcriptional regulator of arginine metabolism D PYS63_06940 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D PYS63_00150 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response D PYS63_01835 sugar-binding transcriptional regulator K11531 lsrR; lsr operon transcriptional repressor D PYS63_06170 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR C 03021 Transcription machinery [BR:anq03021] D PYS63_05680 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D PYS63_06690 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PYS63_00265 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PYS63_00920 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D PYS63_05035 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D PYS63_06260 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D PYS63_05540 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D PYS63_02615 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D PYS63_04055 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D PYS63_02495 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:anq03019] D PYS63_03460 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D PYS63_05495 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D PYS63_05165 VacB/RNase II family 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1] D PYS63_06640 hypothetical protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D PYS63_06880 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PYS63_02495 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D PYS63_03605 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D PYS63_06930 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D PYS63_03195 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] C 03041 Spliceosome C 03011 Ribosome [BR:anq03011] D PYS63_03170 bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D PYS63_03895 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D PYS63_06800 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D PYS63_03330 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D PYS63_06745 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D PYS63_02985 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D PYS63_05285 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D PYS63_06760 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D PYS63_05820 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D PYS63_06835 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D PYS63_06695 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D PYS63_05290 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D PYS63_06700 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D PYS63_06765 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D PYS63_03175 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D PYS63_03500 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D PYS63_06785 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D PYS63_02995 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D PYS63_06810 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D PYS63_02800 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D PYS63_05205 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D PYS63_02625 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D PYS63_06815 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D PYS63_06830 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D PYS63_06825 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D PYS63_06770 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D PYS63_06755 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D PYS63_03060 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D PYS63_02630 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D PYS63_02620 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D PYS63_02635 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D PYS63_05825 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D PYS63_06780 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D PYS63_06735 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D PYS63_06795 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D PYS63_06685 L17 family ribosomal protein K02879 RP-L17; large subunit ribosomal protein L17 D PYS63_06750 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D PYS63_03555 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D PYS63_04260 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D PYS63_05920 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D PYS63_06805 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D PYS63_06820 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D PYS63_06775 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D PYS63_05910 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D PYS63_04745 L28 family ribosomal protein K02902 RP-L28; large subunit ribosomal protein L28 D PYS63_06790 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D PYS63_06740 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D PYS63_02500 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D PYS63_06110 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D PYS63_02605 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D PYS63_05475 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D PYS63_04265 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D PYS63_06705 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D PYS63_05315 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 03009 Ribosome biogenesis [BR:anq03009] D PYS63_03460 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D PYS63_02270 era; GTPase Era K03595 era; GTPase D PYS63_05905 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D PYS63_06260 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D PYS63_05540 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D PYS63_02615 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D PYS63_02420 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D PYS63_03305 rRNA adenine dimethyltransferase family protein K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D PYS63_05965 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D PYS63_04280 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D PYS63_05445 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D PYS63_06215 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D PYS63_05770 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D PYS63_04130 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D PYS63_05295 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D PYS63_03425 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D PYS63_03820 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D PYS63_00560 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D PYS63_02255 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D PYS63_05230 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D PYS63_05500 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D PYS63_05235 pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D PYS63_05750 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D PYS63_03510 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D PYS63_05150 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D PYS63_04135 ribonuclease III domain-containing protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D PYS63_03805 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D PYS63_06105 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D PYS63_03560 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A D PYS63_04240 hflX; GTPase HflX K03665 hflX; GTPase D PYS63_02515 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D PYS63_05250 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D PYS63_06245 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D PYS63_06265 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D PYS63_02855 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D PYS63_05900 YhbY family RNA-binding protein K07574 yhbY; RNA-binding protein D PYS63_05420 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D PYS63_05090 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:anq03016] D PYS63_01935 MBL fold metallo-hydrolase K00784 rnz; ribonuclease Z [EC:3.1.26.11] D PYS63_02150 hypothetical protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D PYS63_00550 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PYS63_05815 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PYS63_03140 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PYS63_00825 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PYS63_03280 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PYS63_00555 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D PYS63_02820 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PYS63_04050 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D PYS63_03390 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PYS63_03260 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PYS63_03125 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D PYS63_00925 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D PYS63_06315 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PYS63_02690 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PYS63_04140 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PYS63_03640 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PYS63_03385 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PYS63_04855 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PYS63_04850 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PYS63_05885 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PYS63_02410 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PYS63_02925 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D PYS63_03265 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D PYS63_05845 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D PYS63_06670 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D PYS63_06235 hypothetical protein K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D PYS63_02890 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PYS63_03800 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PYS63_02515 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D PYS63_03765 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D PYS63_05455 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D PYS63_05450 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D PYS63_05470 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D PYS63_03230 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D PYS63_03380 tRNA-dihydrouridine synthase family protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D PYS63_03750 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D PYS63_05160 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D PYS63_05070 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D PYS63_03515 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D PYS63_02685 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D PYS63_04255 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D PYS63_05875 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D PYS63_02885 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D PYS63_05065 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D PYS63_04380 epoxyqueuosine reductase QueH K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D PYS63_05060 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D PYS63_03795 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D PYS63_05755 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D PYS63_03320 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D PYS63_05760 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D PYS63_05395 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D PYS63_05165 VacB/RNase II family 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1] C 03012 Translation factors [BR:anq03012] D PYS63_06250 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D PYS63_04270 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D PYS63_03295 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D PYS63_03890 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D PYS63_05275 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D PYS63_00285 fusA; elongation factor G K02355 fusA; elongation factor G D PYS63_05280 fusA; elongation factor G K02355 fusA; elongation factor G D PYS63_02510 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D PYS63_03875 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D PYS63_02505 peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D PYS63_01775 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D PYS63_06710 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D PYS63_05560 efp; elongation factor P K02356 efp; elongation factor P D PYS63_02845 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D PYS63_05685 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:anq03110] D PYS63_00145 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D PYS63_02200 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D PYS63_06930 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D PYS63_03195 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PYS63_06925 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D PYS63_06840 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D PYS63_06935 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D PYS63_03190 co-chaperone GroES K04078 groES; chaperonin GroES D PYS63_02440 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D PYS63_03080 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D PYS63_04230 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D PYS63_03225 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D PYS63_03275 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D PYS63_05190 thioredoxin family protein K03671 TXN; thioredoxin D PYS63_06900 trxA; thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:anq04131] D PYS63_03415 hypothetical protein K00844 HK; hexokinase [EC:2.7.1.1] D PYS63_02565 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PYS63_00180 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D PYS63_02430 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PYS63_03375 MFS transporter K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:anq03032] D PYS63_04335 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D PYS63_01355 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PYS63_03680 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PYS63_00215 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D PYS63_03065 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PYS63_05040 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D PYS63_02990 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PYS63_03595 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PYS63_03845 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D PYS63_00220 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PYS63_03115 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PYS63_05780 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PYS63_06365 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PYS63_03565 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D PYS63_03660 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PYS63_02350 DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D PYS63_05390 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D PYS63_00235 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D PYS63_02345 toprim domain-containing protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D PYS63_05075 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:anq03036] D PYS63_01355 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PYS63_03460 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D PYS63_03680 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PYS63_00215 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D PYS63_03465 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D PYS63_03150 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D PYS63_03155 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D PYS63_04325 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D PYS63_06190 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW D PYS63_06850 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D PYS63_00240 AAA family ATPase K03496 parA; chromosome partitioning protein D PYS63_00245 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PYS63_05450 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D PYS63_05445 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D PYS63_05070 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D PYS63_00130 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D PYS63_03105 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein D PYS63_02680 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:anq03400] D PYS63_05105 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D PYS63_01035 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PYS63_05680 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D PYS63_06335 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D PYS63_03315 aminotransferase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PYS63_03355 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D PYS63_00080 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D PYS63_05255 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PYS63_03660 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PYS63_05145 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D PYS63_03585 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D PYS63_00275 excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D PYS63_03520 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PYS63_05415 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PYS63_00265 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PYS63_06690 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PYS63_00920 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D PYS63_01780 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D PYS63_03755 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D PYS63_03610 Smr/MutS family protein K07456 mutS2; DNA mismatch repair protein MutS2 D PYS63_03760 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D PYS63_05535 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D PYS63_05530 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D PYS63_03595 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PYS63_03845 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D PYS63_00220 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PYS63_03115 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PYS63_05780 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PYS63_06365 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PYS63_02990 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PYS63_03435 recA; recombinase RecA K03553 recA; recombination protein RecA D PYS63_04390 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D PYS63_04385 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D PYS63_04395 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D PYS63_03840 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D PYS63_06325 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D PYS63_00225 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D PYS63_00075 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D PYS63_00650 ATP-binding protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D PYS63_01810 ATP-binding protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D PYS63_06375 recR; recombination mediator RecR K06187 recR; recombination protein RecR D PYS63_05505 AAA family ATPase K03631 recN; DNA repair protein RecN (Recombination protein N) D PYS63_02350 DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D PYS63_05390 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D PYS63_00235 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D PYS63_02345 toprim domain-containing protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D PYS63_05075 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D PYS63_03680 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PYS63_02455 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D PYS63_03440 RecX family transcriptional regulator K03565 recX; regulatory protein D PYS63_04490 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PYS63_04500 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D PYS63_06240 DHH family phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:anq03029] D PYS63_06250 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D PYS63_04270 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D PYS63_03890 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D PYS63_05275 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D PYS63_00285 fusA; elongation factor G K02355 fusA; elongation factor G D PYS63_05280 fusA; elongation factor G K02355 fusA; elongation factor G D PYS63_02270 era; GTPase Era K03595 era; GTPase D PYS63_05885 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PYS63_00825 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PYS63_03390 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PYS63_00925 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D PYS63_02820 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PYS63_02990 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PYS63_06930 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D PYS63_06935 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D PYS63_03195 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PYS63_03190 co-chaperone GroES K04078 groES; chaperonin GroES D PYS63_06925 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D PYS63_02890 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PYS63_03800 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:anq02000] D PYS63_06135 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D PYS63_06140 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D PYS63_03530 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D PYS63_04080 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D PYS63_03525 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D PYS63_04075 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D PYS63_06920 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D PYS63_04815 ABC transporter ATP-binding protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial D PYS63_00010 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein D PYS63_00520 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D PYS63_01435 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D PYS63_01450 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein D PYS63_01905 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D PYS63_04760 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D PYS63_06955 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein D PYS63_00015 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D PYS63_00525 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D PYS63_01430 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D PYS63_01455 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D PYS63_01915 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D PYS63_04770 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D PYS63_00020 ATP-binding cassette domain-containing protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D PYS63_01425 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D PYS63_01910 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D PYS63_04765 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D PYS63_04775 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D PYS63_06425 ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D PYS63_06420 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D PYS63_06415 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D PYS63_06410 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D PYS63_00530 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PYS63_01460 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PYS63_06865 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D PYS63_01700 ABC transporter substrate-binding protein K25086 musE; maltose transport system substrate-binding protein D PYS63_01705 sugar ABC transporter permease K25087 musF; maltose transport system permease protein D PYS63_01710 carbohydrate ABC transporter permease K25088 musG; maltose transport system permease protein D PYS63_02370 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D PYS63_05650 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D PYS63_05645 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D PYS63_05640 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D PYS63_05610 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D PYS63_05605 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D PYS63_05600 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D PYS63_02090 extracellular solute-binding protein K10188 lacE; lactose/L-arabinose transport system substrate-binding protein D PYS63_02095 sugar ABC transporter permease K10189 lacF; lactose/L-arabinose transport system permease protein D PYS63_02100 carbohydrate ABC transporter permease K10190 lacG; lactose/L-arabinose transport system permease protein D PYS63_04595 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D PYS63_00055 substrate-binding domain-containing protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D PYS63_00045 galactoside ABC transporter permease K10541 mglC; methyl-galactoside transport system permease protein D PYS63_00050 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D PYS63_00440 ABC transporter substrate-binding protein K25067 fcsSBP; fucose transport system substrate-binding protein D PYS63_00445 sugar ABC transporter permease K25068 K25068; fucose transport system permease protein D PYS63_00450 carbohydrate ABC transporter permease K25069 K25069; fucose transport system permease protein D PYS63_04545 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D PYS63_04550 ABC transporter permease K10440 rbsC; ribose transport system permease protein D PYS63_04555 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D PYS63_04600 extracellular solute-binding protein K25670 fusA; fructooligosaccharide transport system substrate-binding protein D PYS63_04590 carbohydrate ABC transporter permease K25672 fusB; fructooligosaccharide transport system permease protein D PYS63_04455 extracellular solute-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D PYS63_04465 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D PYS63_04460 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D PYS63_01855 substrate-binding domain-containing protein K10555 lsrB; AI-2 transport system substrate-binding protein D PYS63_01845 ABC transporter permease K10556 lsrC; AI-2 transport system permease protein D PYS63_01850 ABC transporter permease K10557 lsrD; AI-2 transport system permease protein D PYS63_01840 sugar ABC transporter ATP-binding protein K10558 lsrA; AI-2 transport system ATP-binding protein D PYS63_01255 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D PYS63_01655 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D PYS63_01260 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D PYS63_01660 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D PYS63_02375 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D PYS63_01265 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D PYS63_01665 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D PYS63_02380 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D PYS63_04085 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D PYS63_04090 ABC transporter permease K02072 metI; D-methionine transport system permease protein D PYS63_04095 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein D PYS63_06310 trpX; tryptophan ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D PYS63_06305 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein D PYS63_06300 ATP-binding cassette domain-containing protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D PYS63_02940 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D PYS63_02945 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D PYS63_02950 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D PYS63_02955 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D PYS63_02960 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D PYS63_03735 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D PYS63_05870 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D PYS63_01760 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D PYS63_02460 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D PYS63_05115 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D PYS63_05860 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D PYS63_01755 ATP-binding cassette domain-containing protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D PYS63_05120 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D PYS63_05865 ATP-binding cassette domain-containing protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D PYS63_02015 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D PYS63_06675 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein D PYS63_06680 energy-coupling factor transporter ATPase K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D PYS63_04690 ABC transporter permease K25142 lnrN; linearmycin/streptolysin S transport system permease protein D PYS63_04695 ABC transporter permease K25143 lnrM; linearmycin/streptolysin S transport system permease protein D PYS63_04700 ABC transporter ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein D PYS63_06850 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D PYS63_04890 ABC transporter ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein D PYS63_00905 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PYS63_00795 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D PYS63_00805 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D PYS63_01575 DUF1430 domain-containing protein K02004 ABC.CD.P; putative ABC transport system permease protein D PYS63_03705 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D PYS63_03710 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D PYS63_03725 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D PYS63_05655 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D PYS63_00385 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PYS63_00800 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PYS63_01580 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PYS63_03715 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PYS63_03730 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PYS63_05660 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PYS63_05360 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D PYS63_03600 hypothetical protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D PYS63_00410 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D PYS63_00425 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D PYS63_02525 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D PYS63_03375 MFS transporter K06902 UMF1; MFS transporter, UMF1 family D PYS63_04295 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D PYS63_00270 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D PYS63_04290 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D PYS63_05935 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D PYS63_03005 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D PYS63_03015 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D PYS63_03055 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D PYS63_01495 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component D PYS63_03020 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component D PYS63_03050 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component D PYS63_02710 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D PYS63_02385 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D PYS63_00250 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D PYS63_01385 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D PYS63_05945 Na+/H+ antiporter NhaC family protein K03315 nhaC; Na+:H+ antiporter, NhaC family D PYS63_04655 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter D PYS63_04000 potassium transporter TrkG K03498 trkH; trk/ktr system potassium uptake protein D PYS63_04070 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D PYS63_03995 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D PYS63_04065 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D PYS63_02140 uracil-xanthine permease family protein K02824 uraA; uracil permease D PYS63_00980 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D PYS63_04620 chloride channel protein K03281 clcA; chloride channel protein, CIC family D PYS63_02765 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter D PYS63_02730 lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D PYS63_01930 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D PYS63_01920 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D PYS63_03545 ECF transporter S component K23675 fmnP; riboflavin transporter D PYS63_05805 energy-coupled thiamine transporter ThiT K16789 thiT; thiamine transporter D PYS63_06190 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW D PYS63_03690 FTR1 family iron permease K07243 FTR; high-affinity iron transporter D PYS63_03695 iron transporter K07230 p19; periplasmic iron binding protein D PYS63_02070 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D PYS63_02050 pyruvate carboxylase subunit B K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D PYS63_02065 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D PYS63_02920 cytochrome c biogenesis CcdA family protein K06196 ccdA; cytochrome c-type biogenesis protein D PYS63_00540 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:anq02044] D PYS63_04170 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D PYS63_02860 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA D PYS63_02400 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D PYS63_04825 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PYS63_05260 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein D PYS63_02610 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D PYS63_05170 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D PYS63_06730 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PYS63_03495 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PYS63_03470 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D PYS63_05055 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC C 02042 Bacterial toxins [BR:anq02042] D PYS63_00250 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:anq02022] D PYS63_01940 response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3 D PYS63_03985 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D PYS63_03980 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D PYS63_05240 ATP-binding protein K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3] D PYS63_05305 ATP-binding protein K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D PYS63_05310 response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR C 02035 Bacterial motility proteins [BR:anq02035] D PYS63_04170 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:anq04812] D PYS63_00240 AAA family ATPase K03496 parA; chromosome partitioning protein D PYS63_00245 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:anq04147] D PYS63_06880 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PYS63_02565 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PYS63_05720 tpiA; triose-phosphate isomerase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PYS63_02430 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PYS63_03195 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PYS63_06930 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D PYS63_03300 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PYS63_04060 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D PYS63_05275 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D PYS63_03265 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D PYS63_01605 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYS63_06020 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYS63_06580 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PYS63_06725 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D PYS63_04250 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D PYS63_00455 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D PYS63_01490 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D PYS63_04585 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D PYS63_06030 galactokinase family protein K00849 galK; galactokinase [EC:2.7.1.6] D PYS63_02970 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D PYS63_01390 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PYS63_00180 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:anq02048] D PYS63_01965 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D PYS63_01955 cas9; type II CRISPR RNA-guided endonuclease Cas9 K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] D PYS63_01970 csn2; type II-A CRISPR-associated protein Csn2 K19137 csn2; CRISPR-associated protein Csn2 D PYS63_06070 type I restriction endonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D PYS63_06060 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D PYS63_06065 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D PYS63_00700 site-specific DNA-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D PYS63_01355 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PYS63_03950 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D PYS63_01540 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D PYS63_01535 DUF6290 family protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D PYS63_00615 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D PYS63_00660 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D PYS63_01210 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D PYS63_00175 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J D PYS63_00620 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J D PYS63_00655 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J D PYS63_01205 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J D PYS63_01715 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J D PYS63_06630 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J D PYS63_00610 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J D PYS63_00715 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J D PYS63_02105 type II toxin-antitoxin system Phd/YefM family antitoxin K19159 yefM; antitoxin YefM D PYS63_00775 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D PYS63_00630 type II toxin-antitoxin system death-on-curing family toxin K07341 doc; death on curing protein D PYS63_00550 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PYS63_02890 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PYS63_03800 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:anq01504] D PYS63_01075 tet(M); tetracycline resistance ribosomal protection protein Tet(M) K18220 tetM; ribosomal protection tetracycline resistance protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:anq03100] D PYS63_05315 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D PYS63_00125 msrB; peptide-methionine (R)-S-oxide reductase MsrB K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D PYS63_03370 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D PYS63_05195 pflA; pyruvate formate-lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D PYS63_04345 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D PYS63_00500 hypothetical protein K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D PYS63_06610 gnpA; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase K15533 K15533; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase [EC:2.4.1.211] D PYS63_01640 glycoside hydrolase family 65 protein K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230] D PYS63_06220 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D PYS63_01765 LTA synthase family protein K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20] D PYS63_02670 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D PYS63_00815 HAMP domain-containing sensor histidine kinase K10819 E2.7.13.3; histidine kinase [EC:2.7.13.3] D PYS63_05335 alpha/beta hydrolase K03928 yvaK; carboxylesterase [EC:3.1.1.1] D PYS63_05565 HAD-IIIA family hydrolase K07015 yqeG; putative phosphatase [EC:3.1.3.-] D PYS63_02265 HDIG domain-containing protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D PYS63_03285 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D PYS63_01670 glycoside hydrolase family 31 protein K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D PYS63_03830 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D PYS63_04675 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D PYS63_06910 NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136] D PYS63_04540 RbsD/FucU domain-containing protein K02431 fucU; L-fucose mutarotase [EC:5.1.3.29] D PYS63_06000 carboxylate--amine ligase K17810 asl; D-aspartate ligase [EC:6.3.1.12] D PYS63_02695 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D PYS63_02405 HAD-IC family P-type ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D PYS63_05375 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins C 99983 Lipid metabolism C 99984 Nucleotide metabolism D PYS63_04495 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction D PYS63_06485 DNA/RNA non-specific endonuclease K15051 endA; DNA-entry nuclease C 99985 Amino acid metabolism C 99986 Glycan metabolism D PYS63_03340 lysylphosphatidylglycerol synthase transmembrane domain-containing protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D PYS63_05955 DUF370 domain-containing protein K09777 remA; extracellular matrix regulatory protein A D PYS63_00230 DUF370 domain-containing protein K24648 remB; extracellular matrix regulatory protein B C 99974 Translation C 99975 Protein processing D PYS63_02190 tig; trigger factor K03545 tig; trigger factor D PYS63_03325 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D PYS63_05085 magnesium chelatase domain-containing protein K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D PYS63_03130 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D PYS63_03570 YraN family protein K07460 yraN; putative endonuclease D PYS63_05080 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein D PYS63_01120 mobT; MobT family relaxase K07467 nicK; putative DNA relaxase D PYS63_03790 replication-associated recombination protein A K07478 ycaJ; putative ATPase D PYS63_01280 helix-turn-helix domain-containing protein K07483 K07483; transposase D PYS63_01285 IS3 family transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D PYS63_06370 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D PYS63_01730 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family C 99978 Cell growth D PYS63_05460 protein jag K06346 jag; spoIIIJ-associated protein C 99993 Cell motility C 99995 Signaling proteins D PYS63_06100 typA; translational GTPase TypA K06207 typA; GTP-binding protein D PYS63_02260 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins C 99994 Others D PYS63_03045 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein B B 09194 Poorly characterized C 99996 General function prediction only D PYS63_00535 phosphatase K04477 ycdX; putative hydrolase D PYS63_03910 hypothetical protein K06878 K06878; tRNA-binding protein D PYS63_05380 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D PYS63_05365 SufD family Fe-S cluster assembly protein K09015 sufD; Fe-S cluster assembly protein SufD D PYS63_00335 LemA family protein K03744 lemA; LemA protein D PYS63_04785 LemA family protein K03744 lemA; LemA protein D PYS63_02810 YdcF family protein K03748 sanA; SanA protein C 99997 Function unknown D PYS63_05045 scfB; thioether cross-link-forming SCIFF peptide maturase K06871 K06871; uncharacterized protein D PYS63_04780 TPM domain-containing protein K06872 K06872; uncharacterized protein D PYS63_05690 hypothetical protein K06923 K06923; uncharacterized protein D PYS63_00480 AAA family ATPase K06926 K06926; uncharacterized protein D PYS63_03505 KH domain-containing protein K06960 K06960; uncharacterized protein D PYS63_04805 GNAT family N-acetyltransferase K06975 K06975; uncharacterized protein D PYS63_04875 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein D PYS63_00320 PTS sugar transporter subunit IIC K07035 K07035; uncharacterized protein D PYS63_06125 PTS sugar transporter subunit IIC K07035 K07035; uncharacterized protein D PYS63_00280 metallophosphoesterase K07099 K07099; uncharacterized protein D PYS63_06115 transcription repressor NadR K07105 K07105; uncharacterized protein D PYS63_00365 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein D PYS63_06605 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein D PYS63_00475 ATP-binding protein K07133 K07133; uncharacterized protein D PYS63_00965 ATP-binding protein K07133 K07133; uncharacterized protein D PYS63_01155 ATP-binding protein K07133 K07133; uncharacterized protein D PYS63_03550 ATP-binding protein K07133 K07133; uncharacterized protein D PYS63_06575 ATP-binding protein K07133 K07133; uncharacterized protein D PYS63_06620 ATP-binding protein K07133 K07133; uncharacterized protein D PYS63_02790 hypothetical protein K07137 K07137; uncharacterized protein D PYS63_04410 divergent PAP2 family protein K09775 K09775; uncharacterized protein D PYS63_03490 sigma factor-like helix-turn-helix DNA-binding protein K09787 K09787; uncharacterized protein D PYS63_01550 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein D PYS63_06450 MupG family TIM beta-alpha barrel fold protein K09963 K09963; uncharacterized protein D PYS63_05915 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 25, 2024