+F Repair protein KO
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DNA Repair and Recombination Proteins - Asparagus officinalis (garden asparagus)
%
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 109849129 DNA oxidative demethylase ALKBH2 isoform X1 K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 109823893 DExH-box ATP-dependent RNA helicase DExH14 K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D 109838436 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 109827501 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 109845396 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 109830172 LOW QUALITY PROTEIN: adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 109819465 methyl-CpG-binding domain protein 4-like protein K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 109823247 N-glycosylase/DNA lyase OGG1 K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E 109824560 endonuclease III homolog 1, chloroplastic-like K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 109835777 putative DNA glycosylase At3g47830 isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 109851358 DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 109823232 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 109836584 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
F 109825967 uncharacterized protein LOC109825967 K03504 POLD3; DNA polymerase delta subunit 3
F 109825400 DNA polymerase delta subunit 4 K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 109823749 DNA polymerase epsilon catalytic subunit A isoform X1 K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 109846470 DNA polymerase epsilon subunit B-like isoform X1 K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
E 109821994 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 109850145 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 109822226 flap endonuclease 1-A isoform X1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 109837785 DNA ligase 1-like isoform X1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E 109844350 DNA-repair protein XRCC1 K10803 XRCC1; DNA-repair protein XRCC1
D Other BER factors
E 109833351 tyrosyl-DNA phosphodiesterase 1 isoform X1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 109842914 transcription factor bHLH140 isoform X1 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 109843965 polynucleotide 3'-phosphatase ZDP isoform X1 K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 109849099 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 109824938 poly [ADP-ribose] polymerase 1 isoform X1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 109835373 LOW QUALITY PROTEIN: putative poly [ADP-ribose] polymerase 3 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 109824099 poly [ADP-ribose] polymerase 3-like K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 109831833 poly [ADP-ribose] polymerase 2-A K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 109844610 DNA repair protein RAD4 isoform X1 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 109842304 ubiquitin receptor RAD23b-like K10839 RAD23; UV excision repair protein RAD23
F 109841292 ubiquitin receptor RAD23b K10839 RAD23; UV excision repair protein RAD23
F 109845025 LOW QUALITY PROTEIN: ubiquitin receptor RAD23b-like K10839 RAD23; UV excision repair protein RAD23
F 109844419 LOW QUALITY PROTEIN: ubiquitin receptor RAD23d-like K10839 RAD23; UV excision repair protein RAD23
F 109849310 ubiquitin receptor RAD23d-like K10839 RAD23; UV excision repair protein RAD23
F 109850270 ubiquitin receptor RAD23d-like K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F 109828983 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 109844953 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 109846322 LOW QUALITY PROTEIN: cullin-4-like K10609 CUL4; cullin 4
F 109848632 LOW QUALITY PROTEIN: cullin-4-like K10609 CUL4; cullin 4
F 109825984 DNA damage-binding protein 1a K10610 DDB1; DNA damage-binding protein 1
F 109821912 DNA damage-binding protein 2-like K10140 DDB2; DNA damage-binding protein 2
F 109837752 DNA damage-binding protein 2 isoform X1 K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
F 109845156 DNA repair protein rhp7 isoform X1 K15082 RAD7; DNA repair protein RAD7
F 109833490 LOW QUALITY PROTEIN: DNA repair protein RAD16-like K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 109827408 DNA-directed RNA polymerase II subunit 1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 109839540 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 109841114 DNA-directed RNA polymerases II, IV and V subunit 3-like K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 109819980 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 109837638 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 109829039 DNA-directed RNA polymerase V subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 109830532 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 109831692 DNA-directed RNA polymerases II and IV subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 109825382 DNA-directed RNA polymerases II, IV and V subunit 6A-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 109835422 DNA-directed RNA polymerase II subunit RPB7-like K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 109850380 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 109832463 DNA-directed RNA polymerases II and V subunit 8A-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 109820641 DNA-directed RNA polymerases II, IV and V subunit 9B-like isoform X1 K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 109850844 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 109824707 DNA-directed RNA polymerases I, II, and III subunit RPABC5-like K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 109830304 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 109830164 DNA-directed RNA polymerases II, IV and V subunit 11-like K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 109834585 DNA-directed RNA polymerases II, IV and V subunit 11-like K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 109822285 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F 109828983 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 109844953 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 109846322 LOW QUALITY PROTEIN: cullin-4-like K10609 CUL4; cullin 4
F 109848632 LOW QUALITY PROTEIN: cullin-4-like K10609 CUL4; cullin 4
F 109825984 DNA damage-binding protein 1a K10610 DDB1; DNA damage-binding protein 1
F 109825496 DNA excision repair protein ERCC-8-like K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 109823626 DNA excision repair protein CSB K10841 ERCC6; DNA excision repair protein ERCC-6
F 109822418 LOW QUALITY PROTEIN: UV-stimulated scaffold protein A homolog K23720 UVSSA; UV-stimulated scaffold protein A
F 109845303 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 109823652 DNA repair helicase XPB1-like K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 109845381 DNA repair helicase XPB1 isoform X1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 109831389 LOW QUALITY PROTEIN: DNA repair helicase XPD K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 109848274 probable RNA polymerase II transcription factor B subunit 1-1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 109837187 general transcription factor IIH subunit 2 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 109850653 RNA polymerase II transcription factor B subunit 4-like isoform X1 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 109825191 RNA polymerase II transcription factor B subunit 2 isoform X1 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 109826468 RNA polymerase II transcription factor B subunit 2-like K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 109822475 RNA polymerase II transcription factor B subunit 5 isoform X1 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 109848719 cyclin-dependent kinase D-1-like K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 109827778 LOW QUALITY PROTEIN: cyclin-H1-1-like K06634 CCNH; cyclin H
E 109840114 cyclin-H1-1-like K06634 CCNH; cyclin H
E 109830469 LOW QUALITY PROTEIN: uncharacterized protein LOC109830469 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E 109848350 LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 109844619 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 109849301 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 109840439 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 109850670 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 109837420 replication protein A 32 kDa subunit B-like K10739 RFA2; replication factor A2
E 109822023 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
D Other NER factors
E 109839562 DNA excision repair protein ERCC-1 K10849 ERCC1; DNA excision repair protein ERCC-1
E 109839311 DNA repair endonuclease UVH1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 109850458 DNA repair protein UVH3 K10846 ERCC5; DNA excision repair protein ERCC-5
E 109837785 DNA ligase 1-like isoform X1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 109840603 MMS19 nucleotide excision repair protein homolog isoform X1 K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 109832605 LOW QUALITY PROTEIN: cullin-3A-like K03869 CUL3; cullin 3
E 109833879 cullin-3A-like K03869 CUL3; cullin 3
E 109829817 elongin-C K03872 ELOC; elongin-C
E 109841278 uncharacterized protein LOC109841278 K03873 ELOB; elongin-B
E 109832610 uncharacterized protein LOC109832610 K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 109822519 DNA mismatch repair protein MSH2 K08735 MSH2; DNA mismatch repair protein MSH2
E 109819808 DNA mismatch repair protein MSH3 K08736 MSH3; DNA mismatch repair protein MSH3
E 109827295 DNA mismatch repair protein MSH7 isoform X1 K08737 MSH6; DNA mismatch repair protein MSH6
E 109845173 DNA mismatch repair protein MSH6 isoform X1 K08737 MSH6; DNA mismatch repair protein MSH6
E 109851315 DNA mismatch repair protein MSH6-like isoform X1 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 109823819 LOW QUALITY PROTEIN: DNA mismatch repair protein MLH1 K08734 MLH1; DNA mismatch repair protein MLH1
E 109831817 DNA mismatch repair protein PMS1 isoform X1 K10858 PMS2; DNA mismatch repair protein PMS2
E 109847448 DNA mismatch repair protein MLH3 K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E 109823232 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 109836584 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
E 109825967 uncharacterized protein LOC109825967 K03504 POLD3; DNA polymerase delta subunit 3
E 109825400 DNA polymerase delta subunit 4 K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 109848350 LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 109844619 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 109849301 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 109840439 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 109850670 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 109837420 replication protein A 32 kDa subunit B-like K10739 RFA2; replication factor A2
E 109822023 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 109843874 replication factor C subunit 1 isoform X1 K10754 RFC1; replication factor C subunit 1
E 109838651 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 109837963 LOW QUALITY PROTEIN: replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 109832946 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 109837436 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
E 109845383 LOW QUALITY PROTEIN: replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 109844293 uncharacterized protein LOC109844293 isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 109821994 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 109850145 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 109829113 exonuclease 1 isoform X1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 109834059 exonuclease 1 isoform X1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 109837785 DNA ligase 1-like isoform X1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 109829050 WD repeat-containing protein 76 K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 109819935 double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 109830754 LOW QUALITY PROTEIN: DNA repair protein RAD50-like K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 109820460 nijmegen breakage syndrome 1 protein isoform X1 K10867 NBN; nibrin
D BRCA1-core complex
E 109836394 BRCA1-associated RING domain protein 1-like isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 109850440 BRCA1-associated RING domain protein 1-like isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 109848972 protein BREAST CANCER SUSCEPTIBILITY 1 homolog K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E 109831546 uncharacterized protein LOC109831546 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 109836575 uncharacterized protein LOC109836575 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 109819691 BRCA1-A complex subunit BRE K12173 BRE; BRCA1-A complex subunit BRE
E 109821996 uncharacterized protein LOC109821996 K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E 109848059 Fanconi anemia group J protein homolog isoform X1 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 109824172 DNA topoisomerase 2-binding protein 1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 109848653 BRCT domain-containing protein At4g02110 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 109819935 double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 109830754 LOW QUALITY PROTEIN: DNA repair protein RAD50-like K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 109820460 nijmegen breakage syndrome 1 protein isoform X1 K10867 NBN; nibrin
D BRCA complex
E 109846737 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like K08775 BRCA2; breast cancer 2 susceptibility protein
E 109848628 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 109848628 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 109842868 DNA repair protein RAD51 homolog 2 isoform X1 K10869 RAD51L1; RAD51-like protein 1
E 109825606 DNA repair protein RAD51 homolog 3 K10870 RAD51L2; RAD51-like protein 2
E 109829919 DNA repair protein RAD51 homolog 4-like K10871 RAD51L3; RAD51-like protein 3
E 109851602 DNA repair protein XRCC2 homolog isoform X1 K10879 XRCC2; DNA-repair protein XRCC2
D Rad52 family proteins
E 109825715 DNA repair RAD52-like protein 1, mitochondrial K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E 109837403 DNA repair RAD52-like protein 2, chloroplastic K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
D Rad54 family proteins
E 109839113 SNF2 domain-containing protein CLASSY 3-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 109851582 protein CHROMATIN REMODELING 35 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 109848362 SNF2 domain-containing protein CLASSY 1-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 109844501 DNA repair and recombination protein RAD54 isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E 109837040 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 34 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 109831864 ATP-dependent DNA helicase Q-like 1 isoform X1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 109819436 ATP-dependent DNA helicase Q-like SIM isoform X1 K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 109851598 ATP-dependent DNA helicase Q-like SIM isoform X1 K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 109823255 LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 109821653 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 109824029 ATP-dependent DNA helicase Q-like 5 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 109823255 LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 109821653 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 109835465 DNA topoisomerase 3-alpha K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 109830602 recQ-mediated genome instability protein 1 isoform X1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 109840452 uncharacterized protein LOC109840452 K15365 RMI2; RecQ-mediated genome instability protein 2
D RPA (replication factor A)
E 109848350 LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 109844619 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 109849301 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 109840439 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 109850670 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 109837420 replication protein A 32 kDa subunit B-like K10739 RFA2; replication factor A2
E 109822023 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 109840918 serine/threonine-protein phosphatase PP-X isozyme 2 isoform X1 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 109828523 serine/threonine-protein phosphatase PP-X isozyme 2-like K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 109846814 serine/threonine-protein phosphatase PP-X isozyme 2-like isoform X1 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 109828032 serine/threonine-protein phosphatase 4 regulatory subunit 2 isoform X1 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 109831881 serine/threonine-protein phosphatase 4 regulatory subunit 3B isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
E 109831483 LOW QUALITY PROTEIN: uncharacterized protein LOC109831483 K19022 AP5B1; AP-5 complex subunit beta-1
E 109819883 LOW QUALITY PROTEIN: AP-5 complex subunit mu K19023 AP5M1; AP-5 complex subunit mu-1
E 109845338 AP-5 complex subunit zeta-1 isoform X1 K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E 109831654 structural maintenance of chromosomes protein 5 K22803 SMC5; structural maintenance of chromosomes protein 5
E 109837106 structural maintenance of chromosomes protein 6B-like K22804 SMC6; structural maintenance of chromosomes protein 6
E 109830704 uncharacterized protein LOC109830704 K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 109842448 E3 SUMO-protein ligase MMS21 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 109843571 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 109829640 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E 109819847 crossover junction endonuclease EME1B isoform X1 K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 109849037 crossover junction endonuclease MUS81 isoform X1 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 109822625 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 109844468 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 109830765 structure-specific endonuclease subunit SLX1 homolog 2-like K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 109831613 structure-specific endonuclease subunit SLX1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 109821888 structure-specific endonuclease subunit SLX1 homolog K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 109825806 flap endonuclease GEN-like 1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 109849952 flap endonuclease GEN-like 2 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 109827450 uncharacterized protein LOC109827450 K19026 SPG11; spatacsin
E 109822786 uncharacterized protein LOC109822786 K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 109842549 protein MRG1-like K11339 MORF4L1; mortality factor 4-like protein 1
E 109839446 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 109823831 fidgetin-like protein 1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 109836479 Werner Syndrome-like exonuclease K22807 WRNexo; werner syndrome-like exonuclease [EC:3.1.11.-]
E 109851528 uncharacterized protein LOC109851528 isoform X1 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 109840482 LOW QUALITY PROTEIN: DNA-dependent metalloprotease WSS1-like K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 109827984 single-stranded DNA-binding protein WHY1, chloroplastic-like isoform X1 K26559 WHY1; single-stranded DNA-binding protein WHY1
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 109845109 ATP-dependent DNA helicase 2 subunit KU70 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 109822462 ATP-dependent DNA helicase 2 subunit KU80 isoform X1 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E 109819935 double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 109830754 LOW QUALITY PROTEIN: DNA repair protein RAD50-like K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E 109828922 DNA ligase 4 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 109834871 DNA repair protein XRCC4 K10886 XRCC4; DNA-repair protein XRCC4
D X-family DNA polymerases
E 109849099 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 109842914 transcription factor bHLH140 isoform X1 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 109833477 uncharacterized protein LOC109833477 isoform X1 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 109833479 uncharacterized protein LOC109833479 isoform X1 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 109833485 uncharacterized protein LOC109833485 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 109836607 uncharacterized protein LOC109836607 isoform X1 K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
C FA (Fanconi anemia) pathway
D FA core complex
E 109834335 E3 ubiquitin-protein ligase FANCL isoform X1 K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
E 109830850 uncharacterized protein LOC109830850 K10896 FANCM; fanconi anemia group M protein
D FA core complex binding factors
E 109823540 MHF histone-fold complex subunit 1 K11511 APITD1; centromere protein S
E 109840551 probable ubiquitin-conjugating enzyme E2 37 isoform X1 K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E 109823255 LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 109821653 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 109835465 DNA topoisomerase 3-alpha K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 109830602 recQ-mediated genome instability protein 1 isoform X1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 109840452 uncharacterized protein LOC109840452 K15365 RMI2; RecQ-mediated genome instability protein 2
D FANCD2-I complex
E 109846323 Fanconi anemia group D2 protein homolog K10891 FANCD2; fanconi anemia group D2 protein
E 109842780 Fanconi anemia group I protein K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E 109846737 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like K08775 BRCA2; breast cancer 2 susceptibility protein
E 109848059 Fanconi anemia group J protein homolog isoform X1 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 109830493 fanconi-associated nuclease 1 homolog isoform X1 K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 109848628 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 109825606 DNA repair protein RAD51 homolog 3 K10870 RAD51L2; RAD51-like protein 2
E 109851510 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
E 109831783 WD repeat-containing protein 48 isoform X1 K15361 WDR48; WD repeat-containing protein 48
E 109819678 WD repeat-containing protein 48 homolog K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 109849105 phytochrome-associated serine/threonine-protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 109820139 phytochrome-associated serine/threonine-protein phosphatase-like K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 109822967 serine/threonine-protein phosphatase 6 regulatory subunit 3-like isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
D Ubiquitin ligases
D Others
E 109820299 telomerase Cajal body protein 1 K23314 WRAP53; telomerase Cajal body protein 1
E 109836447 WD repeat-containing protein 70 K24752 WDR70; WD repeat-containing protein 70
E 109829050 WD repeat-containing protein 76 K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 109833417 DNA polymerase eta isoform X1 K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 109851593 DNA repair protein REV1 isoform X1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D 109847133 LOW QUALITY PROTEIN: DNA polymerase zeta catalytic subunit K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D 109828004 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 109832941 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 109843910 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 109844830 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 109821867 ubiquitin-conjugating enzyme E2 7-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 109849353 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 109837525 LOW QUALITY PROTEIN: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 109826787 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 109849378 LOW QUALITY PROTEIN: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 109831632 ubiquitin-conjugating enzyme E2 variant 1C-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 109836902 ubiquitin-conjugating enzyme E2 variant 1D K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 109819728 ubiquitin-conjugating enzyme E2 variant 1C K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 109849607 ubiquitin-conjugating enzyme E2 variant 1D-like isoform X1 K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 109839861 ubiquitin-conjugating enzyme E2 36-like isoform X1 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 109848243 ubiquitin-conjugating enzyme E2 36 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 109821994 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
D 109850145 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D 109843177 cell cycle checkpoint control protein RAD9A K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 109836615 LOW QUALITY PROTEIN: uncharacterized protein LOC109836615 K10903 HUS1; HUS1 checkpoint protein
D 109822055 uncharacterized protein LOC109822055 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 109828297 cell cycle checkpoint protein RAD17 isoform X1 K06662 HRAD17; cell cycle checkpoint protein
D 109838897 cell cycle checkpoint protein RAD17-like K06662 HRAD17; cell cycle checkpoint protein
D 109838651 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 109837963 LOW QUALITY PROTEIN: replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 109832946 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 109837436 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
D 109845383 LOW QUALITY PROTEIN: replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 109844293 uncharacterized protein LOC109844293 isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 109822055 uncharacterized protein LOC109822055 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 109840769 LOW QUALITY PROTEIN: protein timeless homolog K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 109827384 TIMELESS-interacting protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
C Triple T complex
D 109851510 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
D 109838460 uncharacterized protein LOC109838460 K20403 TTI1; TELO2-interacting protein 1
D 109840432 uncharacterized protein At2g39910 K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D 109830020 Golgi to ER traffic protein 4 homolog K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D 109844613 LOW QUALITY PROTEIN: serine/threonine-protein kinase ATR-like K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 109845768 serine/threonine-protein kinase ATM K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 109833765 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 109832052 14-3-3-like protein GF14 kappa K06630 YWHAE; 14-3-3 protein epsilon
D 109848250 14-3-3 protein 9-like isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 109822693 14-3-3-like protein D isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 109844549 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 109833962 14-3-3 protein 7-like K06630 YWHAE; 14-3-3 protein epsilon
D 109833971 14-3-3-like protein B isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 109820678 14-3-3-like protein isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 109848239 14-3-3-like protein GF14-E K06630 YWHAE; 14-3-3 protein epsilon
D 109819682 14-3-3-like protein GF14 kappa K06630 YWHAE; 14-3-3 protein epsilon
D 109831664 wee1-like protein kinase K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 109831770 uncharacterized protein LOC109831770 isoform X1 K20780 MDC1; mediator of DNA damage checkpoint protein 1
D 109819704 uncharacterized protein LOC109819704 isoform X1 K20780 MDC1; mediator of DNA damage checkpoint protein 1
D 109850625 serine/threonine-protein kinase Nek2-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 109836356 LOW QUALITY PROTEIN: serine/threonine-protein kinase Nek6 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 109836809 serine/threonine-protein kinase Nek5-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 109833004 serine/threonine-protein kinase Nek2-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 109849154 protein downstream neighbor of son homolog isoform X1 K22422 DONSON; protein downstream neighbor of Son
D 109849238 protein downstream neighbor of son homolog isoform X1 K22422 DONSON; protein downstream neighbor of Son
D 109827237 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 109842414 LOW QUALITY PROTEIN: protein SDE2 homolog K25059 SDE2; replication stress response regulator SDE2
D 109823100 protein DECREASED SIZE EXCLUSION LIMIT 1 isoform X1 K24770 DSE1; protein decreased size exclusion limit 1
B Other factors with a suspected DNA repair function
C DNA polymerases
D 109824094 helicase and polymerase-containing protein TEBICHI isoform X1 K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 109830709 DNA polymerase V-like K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 109839889 DNA polymerase V-like isoform X1 K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 109837842 DNA-directed primase/polymerase protein isoform X1 K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 109824638 DNA cross-link repair protein SNM1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 109838053 5' exonuclease Apollo K15340 DCLRE1A; DNA cross-link repair 1A protein
D 109845675 uncharacterized protein LOC109845675 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 109825770 LOW QUALITY PROTEIN: 5' exonuclease Apollo K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
D 109850897 exonuclease V, chloroplastic K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 109842652 endonuclease V-like K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 109841425 uncharacterized protein LOC109841425 isoform X1 K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 109820005 LOW QUALITY PROTEIN: DNA annealing helicase and endonuclease ZRANB3 K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 109822437 endonuclease 1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 109844022 endonuclease 2 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 109845250 endonuclease 4-like isoform X1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D 109833453 switch 2 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 109825095 pre-mRNA-processing factor 19 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 109836425 pre-mRNA-processing factor 19-like K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 109830995 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 109832950 pre-mRNA-splicing factor SPF27 homolog K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 109822391 pre-mRNA-splicing factor SPF27 homolog K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 109849257 protein pleiotropic regulatory locus 1 K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 109844772 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 109827883 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 109839052 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 109833689 ribonucleoside-diphosphate reductase large subunit-like isoform X1 K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 109836553 LOW QUALITY PROTEIN: ribonucleoside-diphosphate reductase large subunit-like K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 109830553 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 109830571 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 109838436 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 109827501 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 109828963 DNA-3-methyladenine glycosylase 1-like K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 109845396 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 109830172 LOW QUALITY PROTEIN: adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 109833429 uncharacterized protein LOC109833429 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 109842202 uncharacterized protein LOC109842202 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 109841247 uncharacterized protein LOC109841247 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 109843993 uncharacterized protein LOC109843993 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 109843077 uncharacterized protein LOC109843077 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 109842777 uncharacterized protein LOC109842777 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 109851478 uncharacterized protein LOC109851478 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 109850221 uncharacterized protein LOC109850221 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 109845773 formamidopyrimidine-DNA glycosylase isoform X1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 109824560 endonuclease III homolog 1, chloroplastic-like K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 109835777 putative DNA glycosylase At3g47830 isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 109820018 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
D DNA ligase
D DNA polymerase I
E 109822202 DNA polymerase I A, chloroplastic-like isoform X1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E 109822202 DNA polymerase I A, chloroplastic-like isoform X1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
F CCL56_pgp079 rpoB; RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F CCL56_pgp081 rpoC2; RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F CCL56_pgp080 rpoC1; RNA polymerase beta K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F CCL56_pgp038 RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 109831252 uncharacterized protein LOC109831252 K07456 mutS2; DNA mismatch repair protein MutS2
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E 109847922 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E 109837593 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
E 109850564 DNA repair protein recA homolog 1, chloroplastic isoform X1 K03553 recA; recombination protein RecA
D RecFOR pathway proteins
E 109837593 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
E 109850564 DNA repair protein recA homolog 1, chloroplastic isoform X1 K03553 recA; recombination protein RecA
E 109826817 uncharacterized protein LOC109826817 K04485 radA; DNA repair protein RadA/Sms
E 109844825 LOW QUALITY PROTEIN: ATP-dependent DNA helicase homolog RECG, chloroplastic K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F 109848811 DNA gyrase subunit A, chloroplastic/mitochondrial K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F 109848072 DNA gyrase subunit B, chloroplastic/mitochondrial-like isoform X1 K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F 109848140 uncharacterized protein LOC109848140 isoform X1 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D 109837593 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
D 109850564 DNA repair protein recA homolog 1, chloroplastic isoform X1 K03553 recA; recombination protein RecA
D 109847922 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D 109844772 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 109827883 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 109839052 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024