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#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Amphimedon queenslandica (sponge)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        100636102 DNA-directed RNA polymerase II subunit RPB1-like	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        100640211 DNA-directed RNA polymerase II subunit RPB2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        100634388 DNA-directed RNA polymerase II subunit RPB3-like	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        100632797 DNA-directed RNA polymerase II subunit RPB11-like	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        100639910 DNA-directed RNA polymerase II subunit RPB4-like	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        100633337 DNA-directed RNA polymerase II subunit RPB7-like	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        100637249 DNA-directed RNA polymerase II subunit RPB9-like	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
D      Pol I, II, III common subunits
E        100636582 DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        100637315 DNA-directed RNA polymerases I, II, and III subunit RPABC1-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        100632674 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        100631571 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        109591006 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        109585383 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        109585384 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
E        105314744 transcription initiation factor IIA subunit 1-like	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        100635146 transcription initiation factor IIA subunit 2-like	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        100632833 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        100636064 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        100633446 transcription initiation factor TFIID subunit 1-like	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        105313461 transcription initiation factor TFIID subunit 2-like	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        100632543 transcription initiation factor TFIID subunit 4B-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        100634726 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        100640794 transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        109583012 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        105312488 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        105313294 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        100633098 transcription initiation factor TFIID subunit 9B-like	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        105316438 transcription initiation factor TFIID subunit 10-like	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        100641414 transcription initiation factor TFIID subunit 11-like	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        100637946 transcription initiation factor TFIID subunit 12-like	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        100636453 transcription initiation factor TFIID subunit 13-like	K03127 TAF13; transcription initiation factor TFIID subunit 13 
D      TFIIE
E        100634699 general transcription factor IIE subunit 1-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        100640699 transcription initiation factor IIE subunit beta-like	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        100640358 general transcription factor IIF subunit 1-like	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        100640735 general transcription factor IIF subunit 2-like	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        105312415 general transcription factor IIH subunit 1-like isoform X2	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        100636837 general transcription factor IIH subunit 2-like	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        105312136 general transcription factor IIH subunit 3-like	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        100632485 general transcription factor IIH subunit 4-like	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        100639240 TFIIH basal transcription factor complex helicase XPB subunit-like	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        100640621 TFIIH basal transcription factor complex helicase XPD subunit-like	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        100640296 general transcription factor IIH subunit 5-like	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        100632998 cyclin-dependent kinase 7-like	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        100639439 CDK-activating kinase assembly factor MAT1-like	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        100633811 cyclin-H-like	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        100634438 mediator of RNA polymerase II transcription subunit 6-like	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        105313052 mediator of RNA polymerase II transcription subunit 8-B-like	K15129 MED8; mediator of RNA polymerase II transcription subunit 8 
E        100635468 mediator of RNA polymerase II transcription subunit 11-like	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        100632458 mediator of RNA polymerase II transcription subunit 17-like	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        100639020 mediator of RNA polymerase II transcription subunit 18-like	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        105313881 uncharacterized protein LOC105313881	K15137 MED19; mediator of RNA polymerase II transcription subunit 19 
E        105314170 mediator of RNA polymerase II transcription subunit 20-like	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        100640879 mediator of RNA polymerase II transcription subunit 22-like	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
D      Middle
E        109580358 mediator of RNA polymerase II transcription subunit 1-like	K15144 MED1; mediator of RNA polymerase II transcription subunit 1 
E        105312287 mediator of RNA polymerase II transcription subunit 4-like	K15146 MED4; mediator of RNA polymerase II transcription subunit 4 
E        100638054 mediator of RNA polymerase II transcription subunit 7-like	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        100632397 mediator of RNA polymerase II transcription subunit 10-like	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        105316564 mediator of RNA polymerase II transcription subunit 10-like	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        105315892 mediator of RNA polymerase II transcription subunit 10-like	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        105315999 mediator of RNA polymerase II transcription subunit 21-like	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        109582455 mediator of RNA polymerase II transcription subunit 21-like	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        100631833 mediator of RNA polymerase II transcription subunit 31-like	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        100640267 mediator of RNA polymerase II transcription subunit 14-like	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        105312137 mediator of RNA polymerase II transcription subunit 15-like	K15157 MED15; mediator of RNA polymerase II transcription subunit 15 
E        105315909 cleavage and polyadenylation specificity factor subunit 6-like	K15157 MED15; mediator of RNA polymerase II transcription subunit 15 
E        109582672 uncharacterized protein LOC109582672	K15159 MED16; mediator of RNA polymerase II transcription subunit 16 
E        109589771 uncharacterized protein LOC109589771	K15159 MED16; mediator of RNA polymerase II transcription subunit 16 
D      CDK-module
E        100641344 cyclin-dependent kinase 8-like	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        100641644 cyclin-C-like	K15161 CCNC; cyclin-C 
E        105316538 mediator of RNA polymerase II transcription subunit 12-like protein	K15162 MED12; mediator of RNA polymerase II transcription subunit 12 
E        100634857 uncharacterized protein LOC100634857	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        109581187 mediator of RNA polymerase II transcription subunit 25-like	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        100635137 histone acetyltransferase KAT2A-like	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        100637779 transformation/transcription domain-associated protein	K08874 TRRAP; transformation/transcription domain-associated protein 
E        109586796 transcription initiation protein SPT3 homolog isoform X1	K11313 SUPT3H; transcription initiation protein SPT3 
E        100635357 transcriptional adapter 2-beta-like	K15127 TADA2B; transcriptional adapter 2-beta 
E        105314022 transcriptional adapter 3-like isoform X1	K11315 TADA3; transcriptional adapter 3 
E        105315745 transcriptional adapter 3-like	K11315 TADA3; transcriptional adapter 3 
E        105314331 transcriptional adapter 3-like isoform X2	K11315 TADA3; transcriptional adapter 3 
E        105316678 transcriptional adapter 1-like	K11317 TADA1; transcriptional adapter 1 
E        105313461 transcription initiation factor TFIID subunit 2-like	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        100632543 transcription initiation factor TFIID subunit 4B-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        100634726 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        100640794 transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        109583012 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        105312488 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        100633098 transcription initiation factor TFIID subunit 9B-like	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        105316438 transcription initiation factor TFIID subunit 10-like	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        100637946 transcription initiation factor TFIID subunit 12-like	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        100633052 ataxin-7-like protein 3	K11363 SGF11; SAGA-associated factor 11 
E        100632242 SAGA-associated factor 29-like	K11364 SGF29; SAGA-associated factor 29 
E        105316652 ataxin-7-like isoform X1	K11318 ATXN7; ataxin-7 
E        100638251 chromodomain-helicase-DNA-binding protein 1-like	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        100631450 transcription and mRNA export factor ENY2-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        100637980 transcription and mRNA export factor ENY2-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        100632564 splicing factor 3B subunit 3-like isoform X1	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        100641387 probable global transcription activator SNF2L2	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        100635564 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A-like	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        105312685 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        100632151 SWI/SNF complex subunit SMARCC1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        100635292 SWI/SNF complex subunit SMARCC2-like	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        100641850 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        100640322 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1	K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 
E        100638132 actin-like protein 6A	K11340 ACTL6A; actin-like protein 6A 
E        100641060 AT-rich interactive domain-containing protein 1B-like isoform X1	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        109582723 AT-rich interactive domain-containing protein 2-like	K11765 ARID2; AT-rich interactive domain-containing protein 2 
E        105316667 protein polybromo-1-like	K11757 PBRM1; protein polybromo-1 
D      SWI/SNF complex
E        100635564 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A-like	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        105312685 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        100633904 activated RNA polymerase II transcriptional coactivator p15-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
C    Other transcription-related factors
D      Transcription elongation factors
E        100631868 transcription elongation factor A protein 1-like	K03145 TFIIS; transcription elongation factor S-II 
E        100632001 transcription elongation factor SPT4-A-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        100640885 transcription elongation factor SPT4-A-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        100633418 transcription elongation factor SPT5-like	K15172 SUPT5H; transcription elongation factor SPT5 
E        100640829 transcription elongation factor SPT6-like	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        100633779 transcription termination factor 2-like	K15173 TTF2; transcription termination factor 2 [EC:5.6.2.-] 
E        100638872 transcription termination factor 2-like	K15173 TTF2; transcription termination factor 2 [EC:5.6.2.-] 
E        100636794 pre-mRNA cleavage complex 2 protein Pcf11-like	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        100632770 pre-mRNA cleavage complex 2 protein Pcf11-like	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        100634678 cleavage and polyadenylation specificity factor subunit 1-like	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        100632053 cleavage and polyadenylation specificity factor subunit 3-like	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        100635068 cleavage and polyadenylation specificity factor subunit 4-like	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        100634435 serine/threonine-protein phosphatase alpha-2 isoform	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        100632910 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X2	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        100632240 symplekin-like	K06100 SYMPK; symplekin 
E        100634537 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        100640875 5'-3' exoribonuclease 2-like	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        100640146 decapping and exoribonuclease protein-like	K14845 RAI1; RAT1-interacting protein 
E        100640575 regulation of nuclear pre-mRNA domain-containing protein 1B-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        100633996 regulation of nuclear pre-mRNA domain-containing protein 1A-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        100637972 protein SCAF8-like	K13167 SCAF4; SR-related and CTD-associated factor 4 
E        100635311 peptidyl-prolyl cis-trans isomerase NIMA-interacting 1-like	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        100639019 RNA polymerase II-associated factor 1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        100637749 parafibromin-like	K15175 CDC73; parafibromin 
E        100638807 RNA polymerase-associated protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        100640748 RNA polymerase-associated protein LEO1-like	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        100639145 RNA polymerase-associated protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
E        105313743 negative elongation factor A-like	K15179 WHSC2; negative elongation factor A 
E        100637312 negative elongation factor B-like	K15180 COBRA1; negative elongation factor B 
E        100639424 negative elongation factor B-like	K15180 COBRA1; negative elongation factor B 
E        105313087 negative elongation factor B-like	K15180 COBRA1; negative elongation factor B 
E        100632798 negative elongation factor D-like	K15181 TH1L; negative elongation factor C/D 
D      Super elongation complex (SEC)
E        109582166 RNA polymerase II elongation factor ELL2-like isoform X1	K15183 ELL; RNA polymerase II elongation factor ELL 
E        100641409 ELL-associated factor 1-like	K15186 EAF; ELL-associated factor 
E        100639028 protein AF-9-like	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        100636377 cyclin-T1-like isoform X1	K15188 CCNT; cyclin T 
E        100632624 cyclin-dependent kinase 9-like	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      Little elongation complex (LEC)
E        109582166 RNA polymerase II elongation factor ELL2-like isoform X1	K15183 ELL; RNA polymerase II elongation factor ELL 
D      Brd4/P-TEFb complex
E        100636377 cyclin-T1-like isoform X1	K15188 CCNT; cyclin T 
E        100632624 cyclin-dependent kinase 9-like	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        100639186 protein HEXIM-like	K15189 HEXIM1_2; protein HEXIM1/2 
E        100641837 7SK snRNA methylphosphate capping enzyme-like	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        105313544 la protein homolog isoform X1	K15191 LARP7; La-related protein 7 
E        100636377 cyclin-T1-like isoform X1	K15188 CCNT; cyclin T 
E        100632624 cyclin-dependent kinase 9-like	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      DBIRD complex
D      Others
E        100641579 TATA-binding protein-associated factor 172 isoform X1	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        100636080 protein Dr1-like	K21751 DR1; down-regulator of transcription 1 
E        100639013 dr1-associated corepressor-like	K21752 DRAP1; Dr1-associated corepressor 
E        100637926 protein SPT2 homolog	K15193 SPTY2D1; protein SPT2 
E        100639785 RNA polymerase II subunit A C-terminal domain phosphatase-like	K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] 
E        100638416 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        100632731 protein IWS1 homolog	K17498 SPN1; transcription factor SPN1 
E        105312694 RNA polymerase II-associated protein 1-like isoform X2	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        100640921 RNA polymerase II-associated protein 3-like isoform X2	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        105316557 lysine-specific demethylase 6A-like	K06665 SSN6; general transcriptional corepressor CYC8 
E        100636364 cyclin-K-like	K23326 CCNK; cyclin K 
E        100637569 GPN-loop GTPase 3-like	K24104 GPN; GPN-loop GTPase 
E        100642012 GPN-loop GTPase 2-like isoform X2	K24104 GPN; GPN-loop GTPase 
E        100640746 GPN-loop GTPase 1-like	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        100641262 DNA-directed RNA polymerase III subunit RPC1-like	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        100637834 DNA-directed RNA polymerases I and III subunit RPAC1-like isoform X2	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        100636270 DNA-directed RNA polymerases I and III subunit RPAC2-like	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        100634806 DNA-directed RNA polymerase III subunit RPC3-like	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        105316725 DNA-directed RNA polymerase III subunit RPC4-like isoform X1	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        100631936 DNA-directed RNA polymerase III subunit RPC5-like	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        100638756 DNA-directed RNA polymerase III subunit RPC6-like	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        105313674 DNA-directed RNA polymerase III subunit RPC7-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        100641324 DNA-directed RNA polymerase III subunit RPC8-like	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        100634786 DNA-directed RNA polymerase III subunit RPC9-like	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        100642092 DNA-directed RNA polymerase III subunit RPC10-like	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        100636582 DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        100637315 DNA-directed RNA polymerases I, II, and III subunit RPABC1-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        100632674 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        100631571 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        109591006 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        109585383 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        109585384 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
C    Basal transcription factors
D      TFIIIA
D      TFIIIB
E        100636064 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        100638421 transcription factor IIIB 90 kDa subunit-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
D      TFIIIC
E        109580697 general transcription factor 3C polypeptide 1-like isoform X1	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        109584991 uncharacterized protein LOC109584991	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        105312563 general transcription factor 3C polypeptide 3-like	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        105312962 general transcription factor 3C polypeptide 5-like	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
D      TFIIIC, fungi type
E        105312962 general transcription factor 3C polypeptide 5-like	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        105312563 general transcription factor 3C polypeptide 3-like	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        105313622 snRNA-activating protein complex subunit 1-like	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        105313945 snRNA-activating protein complex subunit 3-like	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
D      Octamer transcription factors
E        105314504 bromodomain-containing protein 4-like	K09364 POU2F; POU domain transcription factor, class 2 
D      Others
E        100637517 repressor of RNA polymerase III transcription MAF1 homolog	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        100637834 DNA-directed RNA polymerases I and III subunit RPAC1-like isoform X2	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        100636270 DNA-directed RNA polymerases I and III subunit RPAC2-like	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        100635196 DNA-directed RNA polymerase I subunit RPA49-like	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        100639960 DNA-directed RNA polymerase I subunit RPA49-like isoform X1	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        105314414 DNA-directed RNA polymerase I subunit RPA43-like	K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 
E        105312077 DNA-directed RNA polymerase I subunit RPA12-like	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        100636582 DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        100637315 DNA-directed RNA polymerases I, II, and III subunit RPABC1-like	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        100632674 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        100631571 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        109591006 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        109585383 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        109585384 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
C    Basal transcription factors
D      SL1/TIF-1B
E        100636064 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        109581116 uncharacterized protein LOC109581116	K15212 TAF1A; TATA box-binding protein-associated factor RNA polymerase I subunit A 
E        109593774 TATA box-binding protein-associated factor RNA polymerase I subunit B-like	K15213 TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B 
C    Other transcription-related factors
D      UBF
D      Transcription initiation factors
E        100639322 uncharacterized protein LOC100639322	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
D      Transcription elongation factors
E        100632001 transcription elongation factor SPT4-A-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        100640885 transcription elongation factor SPT4-A-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        100633418 transcription elongation factor SPT5-like	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        100642088 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        100632833 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        100634699 general transcription factor IIE subunit 1-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
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#Last updated: April 9, 2024