+E Transcription factors KO #

  Transcription Factors - Arthrobacter sp. ATCC 21022

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D AUT26_05095 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C GRAS C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D AUT26_18605 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator D AUT26_07195 3-methyladenine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] C LysR family D AUT26_04405 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D AUT26_18550 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein C DeoR family D AUT26_06405 alkaline phosphatase K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D AUT26_09250 DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor C LacI family D AUT26_06350 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AUT26_01775 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AUT26_02630 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AUT26_02710 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AUT26_08745 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AUT26_09295 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AUT26_15910 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AUT26_16095 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AUT26_15250 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AUT26_17615 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AUT26_17680 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AUT26_17380 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AUT26_18660 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D AUT26_16605 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D AUT26_01920 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D AUT26_02210 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D AUT26_02475 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D AUT26_02980 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG C GntR family D AUT26_10925 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D AUT26_08600 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D AUT26_13450 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D AUT26_15915 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D AUT26_18030 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D AUT26_18050 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D AUT26_19395 hypothetical protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D AUT26_19545 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D AUT26_00170 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D AUT26_01040 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex C TetR/AcrR family D AUT26_18190 TetR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D AUT26_03720 TetR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator C Lrp/AsnC family C LuxR family C MarR family D AUT26_05485 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D AUT26_19425 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D AUT26_02850 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D AUT26_08310 heavy metal-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D AUT26_16900 MerR family transcriptional regulator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D AUT26_17165 heat-shock protein K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D AUT26_05225 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR C Fur family D AUT26_12945 peptide ABC transporter substrate-binding protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D AUT26_15010 Fur family transcriptional regulator K22297 furA; Fur family transcriptional regulator, stress-responsive regulator C IclR family D AUT26_17015 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D AUT26_16290 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D AUT26_01455 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D AUT26_01410 hypothetical protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D AUT26_19045 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein C CRP/FNR family D AUT26_16135 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein C Rrf2 family D AUT26_03610 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor C ArsR family D AUT26_00805 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D AUT26_00815 ArsR family transcriptional regulator K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4] D AUT26_19645 hypothetical protein K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor C XRE family D AUT26_03120 XRE family transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D AUT26_06980 transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator C PadR family D AUT26_18245 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator C Other families D AUT26_04455 dihydrofolate reductase K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D AUT26_13035 DtxR family transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D AUT26_17130 RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D AUT26_07740 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D AUT26_06205 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D AUT26_09610 dynein regulation protein LC7 K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D AUT26_15750 REX family transcriptional regulator K01926 rex; redox-sensing transcriptional repressor D AUT26_00345 transcriptional regulator K07727 K07727; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families D AUT26_02925 1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family C Others D AUT26_13205 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D AUT26_05770 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D AUT26_19930 transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D AUT26_18165 CdaR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D AUT26_15065 PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D AUT26_05355 PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D AUT26_18335 PucR family transcriptional regulator K23253 putR; PucR family transcriptional regulator, proline-responsive transcriptional activator D AUT26_20285 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D AUT26_03805 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D AUT26_07175 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D AUT26_11045 heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D AUT26_10170 regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D AUT26_09925 PaaX family transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D AUT26_11120 transcriptional regulator K05346 deoR; deoxyribonucleoside regulator D AUT26_11205 transcriptional regulator K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D AUT26_01145 transcriptional regulator K07734 paiB; transcriptional regulator D AUT26_10045 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D AUT26_07600 transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D AUT26_07480 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: October 29, 2024 #
Classification taken and modified from TRANSFAC 7.0