+D GENES KO #

  KEGG Orthology (KO) - Acinetobacter towneri

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:atg00010] D J4G44_02905 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J4G44_06740 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D J4G44_09435 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D J4G44_04005 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D J4G44_07015 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D J4G44_07295 aldehyde dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D J4G44_09445 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D J4G44_03525 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D J4G44_09320 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J4G44_09740 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D J4G44_01895 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D J4G44_01890 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D J4G44_04825 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_05920 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_08750 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J4G44_07845 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D J4G44_05690 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J4G44_09515 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J4G44_02260 NAD(P)-dependent alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D J4G44_08140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J4G44_07830 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D J4G44_01810 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J4G44_09675 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J4G44_12005 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J4G44_06090 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:atg00020] D J4G44_05885 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D J4G44_09615 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D J4G44_00365 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D J4G44_05910 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D J4G44_05915 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D J4G44_04825 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_05920 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_05930 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D J4G44_05925 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D J4G44_01590 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D J4G44_05900 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D J4G44_05905 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D J4G44_05890 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D J4G44_05895 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D J4G44_00610 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D J4G44_08820 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D J4G44_04755 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J4G44_06090 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D J4G44_01895 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D J4G44_01890 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:atg00030] D J4G44_02905 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J4G44_12170 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D J4G44_07810 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D J4G44_09560 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D J4G44_09140 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D J4G44_12005 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J4G44_05770 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D J4G44_07545 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D J4G44_09435 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D J4G44_06740 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] C 00040 Pentose and glucuronate interconversions [PATH:atg00040] D J4G44_02900 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J4G44_02895 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D J4G44_12170 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:atg00051] D J4G44_02915 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8] D J4G44_12005 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J4G44_06740 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D J4G44_09435 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D J4G44_04005 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:atg00052] D J4G44_02910 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D J4G44_08825 SDR family NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D J4G44_02895 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D J4G44_12005 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00053 Ascorbate and aldarate metabolism [PATH:atg00053] D J4G44_02900 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J4G44_08140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:atg00500] D J4G44_02895 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D J4G44_12005 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J4G44_02905 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:atg00520] D J4G44_00555 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D J4G44_01760 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D J4G44_01865 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D J4G44_01755 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D J4G44_02650 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D J4G44_02315 HAD-IA family hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D J4G44_07975 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D J4G44_07980 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D J4G44_12280 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D J4G44_09505 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D J4G44_02860 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D J4G44_02865 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D J4G44_02830 tviB; Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D J4G44_12005 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J4G44_02895 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D J4G44_02900 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J4G44_02910 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D J4G44_08825 SDR family NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D J4G44_02905 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J4G44_02915 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8] C 00620 Pyruvate metabolism [PATH:atg00620] D J4G44_01810 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J4G44_09675 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J4G44_01895 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D J4G44_01890 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D J4G44_04825 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_05920 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_04385 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D J4G44_07845 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D J4G44_05690 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J4G44_09515 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J4G44_08750 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J4G44_02260 NAD(P)-dependent alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D J4G44_00580 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D J4G44_00585 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D J4G44_12385 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D J4G44_08635 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D J4G44_08630 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D J4G44_04955 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D J4G44_08140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J4G44_07830 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D J4G44_01590 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D J4G44_11140 lldD; FMN-dependent L-lactate dehydrogenase LldD K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D J4G44_11135 dld; D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12] D J4G44_07180 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D J4G44_04265 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D J4G44_07630 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D J4G44_07545 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D J4G44_03030 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D J4G44_10800 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D J4G44_04755 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J4G44_00610 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D J4G44_08820 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D J4G44_02760 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D J4G44_06090 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D J4G44_09740 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D J4G44_08135 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D J4G44_05175 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_05205 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_08955 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09545 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_00655 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:atg00630] D J4G44_11260 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D J4G44_01810 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J4G44_09675 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J4G44_08135 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D J4G44_04755 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J4G44_05885 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D J4G44_09615 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D J4G44_05175 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_05205 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_08955 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09545 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09805 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D J4G44_04455 catalase K03781 katE; catalase [EC:1.11.1.6] D J4G44_07545 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D J4G44_03715 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D J4G44_04375 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D J4G44_12125 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D J4G44_06465 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J4G44_10365 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J4G44_04825 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_05920 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_08735 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D J4G44_00470 TIM barrel protein K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D J4G44_03805 alpha/beta hydrolase K01432 AFMID; arylformamidase [EC:3.5.1.9] D J4G44_04665 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:atg00640] D J4G44_01810 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J4G44_09675 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J4G44_00580 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D J4G44_00585 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D J4G44_04825 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_05920 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_03885 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D J4G44_05170 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J4G44_12385 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D J4G44_08635 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D J4G44_08630 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D J4G44_04955 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D J4G44_05925 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D J4G44_05930 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D J4G44_09085 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D J4G44_05285 acnD; Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D J4G44_11710 prpF; 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D J4G44_09615 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D J4G44_09090 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] C 00650 Butanoate metabolism [PATH:atg00650] D J4G44_05175 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_05205 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_08955 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09545 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_03885 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D J4G44_05170 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J4G44_04385 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D J4G44_09805 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D J4G44_05900 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D J4G44_05905 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D J4G44_05890 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D J4G44_05895 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D J4G44_01590 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D J4G44_07385 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D J4G44_07380 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D J4G44_07375 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D J4G44_02520 zinc-dependent alcohol dehydrogenase family protein K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-] D J4G44_00315 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D J4G44_00310 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:atg00660] D J4G44_00315 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D J4G44_00310 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D J4G44_05925 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D J4G44_05930 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D J4G44_04515 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D J4G44_04520 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D J4G44_04530 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:atg00562] D J4G44_01100 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D J4G44_04005 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:atg00190] D J4G44_11695 ndhC; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D J4G44_11690 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D J4G44_11685 nuoC; NADH-quinone oxidoreductase subunit C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D J4G44_11680 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D J4G44_11675 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D J4G44_11670 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D J4G44_11665 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D J4G44_11660 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D J4G44_11655 nuoJ; NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D J4G44_11650 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D J4G44_11645 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D J4G44_11640 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D J4G44_11635 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D J4G44_05900 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D J4G44_05905 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D J4G44_05890 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D J4G44_05895 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D J4G44_09770 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D J4G44_09765 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D J4G44_09760 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D J4G44_09755 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D J4G44_09750 cyoA; ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D J4G44_09195 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D J4G44_09200 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D J4G44_09205 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D J4G44_03230 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D J4G44_03240 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D J4G44_03235 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D J4G44_03225 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D J4G44_03245 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D J4G44_03210 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D J4G44_03220 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D J4G44_03215 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D J4G44_03430 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D J4G44_02175 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D J4G44_06255 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms [PATH:atg00710] D J4G44_09445 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D J4G44_07015 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D J4G44_07295 aldehyde dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D J4G44_09435 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D J4G44_06740 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D J4G44_07810 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D J4G44_09140 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D J4G44_04005 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D J4G44_12170 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D J4G44_09560 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D J4G44_02760 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D J4G44_10800 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D J4G44_04755 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Carbon fixation pathways in prokaryotes [PATH:atg00720] D J4G44_09740 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D J4G44_02760 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D J4G44_04755 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J4G44_00610 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D J4G44_08820 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D J4G44_05900 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D J4G44_05905 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D J4G44_05890 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D J4G44_05895 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D J4G44_05930 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D J4G44_05925 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D J4G44_05175 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_05205 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_08955 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09545 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_00365 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D J4G44_09615 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D J4G44_12385 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D J4G44_08635 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D J4G44_08630 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D J4G44_04955 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D J4G44_06075 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D J4G44_10785 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D J4G44_00585 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D J4G44_00580 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D J4G44_01810 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J4G44_09675 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:atg00680] D J4G44_08750 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J4G44_12190 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D J4G44_10365 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J4G44_09320 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J4G44_02760 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D J4G44_04755 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J4G44_09435 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D J4G44_06740 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D J4G44_11830 NAD(P)/FAD-dependent oxidoreductase K18277 tmm; trimethylamine monooxygenase [EC:1.14.13.148] D J4G44_00580 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D J4G44_00585 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D J4G44_01810 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J4G44_09675 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J4G44_09740 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D J4G44_03525 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D J4G44_01260 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J4G44_06625 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D J4G44_02165 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D J4G44_11745 thrH; bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39] C 00910 Nitrogen metabolism [PATH:atg00910] D J4G44_10060 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D J4G44_11195 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D J4G44_06465 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J4G44_01435 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D J4G44_01430 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D J4G44_06225 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:atg00920] D J4G44_06880 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D J4G44_01520 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D J4G44_06870 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D J4G44_06865 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D J4G44_06860 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D J4G44_02355 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D J4G44_02360 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D J4G44_02370 ssuC; aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein D J4G44_02375 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D J4G44_02365 ssuD; FMNH2-dependent alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D J4G44_02325 msuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D J4G44_06320 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D J4G44_06315 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D J4G44_08310 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D J4G44_11750 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D J4G44_11375 sulfite reductase flavoprotein subunit alpha K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D J4G44_05190 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D J4G44_02135 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D J4G44_09905 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D J4G44_08965 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D J4G44_00660 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D J4G44_08460 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D J4G44_12490 acyl-CoA synthetase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D J4G44_00195 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D J4G44_01140 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D J4G44_00200 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:atg00061] D J4G44_12385 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D J4G44_08635 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D J4G44_08630 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D J4G44_04955 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D J4G44_05490 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D J4G44_05480 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D J4G44_12110 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D J4G44_05485 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J4G44_09540 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J4G44_08260 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D J4G44_00115 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D J4G44_03415 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J4G44_11895 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:atg00071] D J4G44_05175 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_05205 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_08955 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09545 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_03880 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D J4G44_03885 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D J4G44_05170 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J4G44_08795 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D J4G44_09245 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D J4G44_00830 acyl-CoA dehydrogenase family protein K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8] D J4G44_10215 acyl-CoA dehydrogenase family protein K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8] D J4G44_09365 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D J4G44_03415 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J4G44_11895 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J4G44_09260 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D J4G44_04440 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D J4G44_06275 FAD-dependent oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1] D J4G44_08750 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J4G44_07845 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D J4G44_05690 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J4G44_09515 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J4G44_08140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:atg00561] D J4G44_08140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J4G44_11835 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D J4G44_01025 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D J4G44_08970 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D J4G44_11110 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D J4G44_11755 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D J4G44_01285 triacylglycerol lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D J4G44_01290 triacylglycerol lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] C 00564 Glycerophospholipid metabolism [PATH:atg00564] D J4G44_07500 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D J4G44_01025 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D J4G44_08970 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D J4G44_11110 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D J4G44_09160 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D J4G44_00150 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D J4G44_08230 CDP-archaeol synthase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D J4G44_04790 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D J4G44_02130 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D J4G44_03915 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D J4G44_01750 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D J4G44_05135 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] D J4G44_08755 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:atg00565] D J4G44_09160 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism [PATH:atg00600] D J4G44_12480 neutral/alkaline non-lysosomal ceramidase N-terminal domain-containing protein K12349 ASAH2; neutral ceramidase [EC:3.5.1.23] C 00590 Arachidonic acid metabolism D J4G44_09160 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D J4G44_09160 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:atg00592] D J4G44_09160 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D J4G44_03880 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:atg01040] D J4G44_00155 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D J4G44_10080 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D J4G44_10085 ferredoxin reductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D J4G44_06230 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D J4G44_01020 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D J4G44_04855 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:atg00230] D J4G44_03620 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D J4G44_12005 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J4G44_05770 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D J4G44_07530 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D J4G44_09875 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D J4G44_06690 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D J4G44_07660 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D J4G44_10820 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D J4G44_06695 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D J4G44_02500 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D J4G44_02505 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D J4G44_02205 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D J4G44_07100 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D J4G44_09870 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D J4G44_06285 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D J4G44_07145 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D J4G44_08295 HAD-IA family hydrolase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D J4G44_03970 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D J4G44_05830 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D J4G44_02540 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D J4G44_01870 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D J4G44_00065 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D J4G44_00680 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D J4G44_04710 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D J4G44_02985 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D J4G44_02535 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D J4G44_01355 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D J4G44_05515 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D J4G44_05510 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D J4G44_06795 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D J4G44_01365 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D J4G44_12390 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D J4G44_00430 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D J4G44_08360 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D J4G44_07310 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D J4G44_07260 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D J4G44_11220 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D J4G44_00015 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D J4G44_03615 cpdA; 3',5'-cyclic-AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D J4G44_05095 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D J4G44_06320 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D J4G44_06315 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:atg00240] D J4G44_06000 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D J4G44_06005 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D J4G44_07360 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D J4G44_07365 aspartate carbamoyltransferase K01465 URA4; dihydroorotase [EC:3.5.2.3] D J4G44_10865 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D J4G44_07520 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D J4G44_01980 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D J4G44_08110 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D J4G44_08215 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D J4G44_00065 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D J4G44_00015 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D J4G44_11770 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D J4G44_09330 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D J4G44_08090 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D J4G44_07145 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D J4G44_03970 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D J4G44_11630 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D J4G44_11525 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D J4G44_05515 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D J4G44_05510 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D J4G44_06895 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D J4G44_12010 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D J4G44_00720 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D J4G44_12865 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D J4G44_11035 flavin reductase K09024 rutF; flavin reductase [EC:1.5.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:atg00250] D J4G44_06985 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D J4G44_06910 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D J4G44_04555 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D J4G44_07635 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D J4G44_10855 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D J4G44_03650 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D J4G44_07310 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D J4G44_07100 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D J4G44_07360 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D J4G44_01435 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D J4G44_01430 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D J4G44_11195 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D J4G44_06465 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J4G44_06000 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D J4G44_06005 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D J4G44_01760 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D J4G44_07530 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:atg00260] D J4G44_07285 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D J4G44_04570 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J4G44_03560 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D J4G44_01660 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D J4G44_11745 thrH; bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39] D J4G44_03555 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D J4G44_10365 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J4G44_07545 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D J4G44_03525 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D J4G44_01260 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J4G44_06625 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D J4G44_02165 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D J4G44_04825 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_05920 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_08735 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D J4G44_04790 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D J4G44_09145 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D J4G44_04950 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D J4G44_00130 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D J4G44_08500 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D J4G44_07050 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D J4G44_07055 aspartate aminotransferase family protein K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86] C 00270 Cysteine and methionine metabolism [PATH:atg00270] D J4G44_09905 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D J4G44_08965 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D J4G44_00985 PLP-dependent transferase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D J4G44_06185 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D J4G44_11040 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D J4G44_07805 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D J4G44_02385 5'-nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D J4G44_05830 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D J4G44_00590 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J4G44_01155 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J4G44_13330 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J4G44_10780 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D J4G44_11565 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] D J4G44_07285 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D J4G44_04570 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J4G44_03560 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D J4G44_00660 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D J4G44_01555 aminotransferase class V-fold PLP-dependent enzyme K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D J4G44_08460 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D J4G44_00105 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J4G44_02080 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D J4G44_01945 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D J4G44_06985 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D J4G44_02135 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D J4G44_04755 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D J4G44_00445 cysM; cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D J4G44_01260 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J4G44_06625 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:atg00280] D J4G44_00105 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J4G44_04825 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_05920 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_08795 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D J4G44_09245 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D J4G44_07405 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D J4G44_03885 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D J4G44_05170 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J4G44_03880 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D J4G44_08450 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D J4G44_08140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J4G44_07390 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D J4G44_07400 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D J4G44_07395 enoyl-CoA hydratase/isomerase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D J4G44_07385 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D J4G44_07380 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D J4G44_07375 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D J4G44_05175 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_05205 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_08955 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09545 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:atg00290] D J4G44_09145 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D J4G44_04515 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D J4G44_04520 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D J4G44_04530 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D J4G44_00315 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D J4G44_00310 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D J4G44_00305 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D J4G44_02720 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D J4G44_02725 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D J4G44_00105 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J4G44_07635 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D J4G44_00655 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:atg00300] D J4G44_03560 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D J4G44_07285 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D J4G44_04570 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J4G44_02195 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D J4G44_02795 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D J4G44_06840 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D J4G44_07160 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D J4G44_07650 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D J4G44_11450 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D J4G44_06550 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D J4G44_06545 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D J4G44_05200 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16] D J4G44_01500 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D J4G44_01495 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:atg00310] D J4G44_05915 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D J4G44_04825 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_05920 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_09365 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D J4G44_03885 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D J4G44_05170 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J4G44_05175 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_05205 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_08955 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09545 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_08140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:atg00220] D J4G44_09100 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D J4G44_10855 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D J4G44_03650 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D J4G44_06465 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J4G44_06000 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D J4G44_06005 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D J4G44_11195 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D J4G44_06985 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D J4G44_07635 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D J4G44_02350 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D J4G44_04985 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D J4G44_12000 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D J4G44_09130 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D J4G44_07160 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:atg00330] D J4G44_08140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J4G44_09015 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J4G44_12375 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D J4G44_07040 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D J4G44_00570 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D J4G44_06985 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:atg00340] D J4G44_12275 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D J4G44_07305 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D J4G44_04095 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D J4G44_01640 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D J4G44_01625 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D J4G44_01665 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D J4G44_01620 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D J4G44_10205 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J4G44_12265 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J4G44_12270 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D J4G44_08140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:atg00350] D J4G44_06985 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D J4G44_10205 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J4G44_12265 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J4G44_08750 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J4G44_07845 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D J4G44_05690 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J4G44_09515 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J4G44_09415 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] C 00360 Phenylalanine metabolism [PATH:atg00360] D J4G44_06985 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D J4G44_10205 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J4G44_12265 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J4G44_09015 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J4G44_04415 aromatic ring-hydroxylating dioxygenase subunit alpha K05708 hcaE; 3-phenylpropionate/trans-cinnamate dioxygenase subunit alpha [EC:1.14.12.19] D J4G44_04420 3-phenylpropionate/cinnamic acid dioxygenase subunit beta K05709 hcaF; 3-phenylpropionate/trans-cinnamate dioxygenase subunit beta [EC:1.14.12.19] D J4G44_04425 bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component D J4G44_04440 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D J4G44_04430 hcaB; 3-(cis-5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate dehydrogenase K05711 hcaB; 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase [EC:1.3.1.87] D J4G44_04435 3-carboxyethylcatechol 2,3-dioxygenase K05713 mhpB; 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16] D J4G44_04380 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00380 Tryptophan metabolism [PATH:atg00380] D J4G44_03805 alpha/beta hydrolase K01432 AFMID; arylformamidase [EC:3.5.1.9] D J4G44_05915 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D J4G44_04825 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_05920 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_09365 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D J4G44_03885 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D J4G44_05170 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J4G44_05175 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_05205 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_08955 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09545 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_08140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J4G44_09015 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J4G44_04455 catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:atg00400] D J4G44_08745 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D J4G44_09280 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D J4G44_01445 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D J4G44_08640 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D J4G44_01130 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D J4G44_01450 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71] D J4G44_10200 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D J4G44_09215 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D J4G44_03720 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D J4G44_06460 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D J4G44_06455 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D J4G44_00135 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D J4G44_06450 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D J4G44_04950 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D J4G44_00130 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D J4G44_08500 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D J4G44_10210 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D J4G44_06985 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D J4G44_10205 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J4G44_12265 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:atg00410] D J4G44_05755 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D J4G44_08140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J4G44_12510 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D J4G44_03885 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D J4G44_05170 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00430 Taurine and hypotaurine metabolism [PATH:atg00430] D J4G44_00585 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D J4G44_00580 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:atg00450] D J4G44_00985 PLP-dependent transferase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D J4G44_06185 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D J4G44_11040 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D J4G44_12060 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D J4G44_06320 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D J4G44_06315 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D J4G44_11540 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:atg00460] D J4G44_04555 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D J4G44_10365 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:atg00470] D J4G44_09800 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D J4G44_01930 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D J4G44_04250 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D J4G44_03590 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D J4G44_06550 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D J4G44_06545 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:atg00480] D J4G44_02080 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D J4G44_01945 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D J4G44_03510 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D J4G44_09600 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D J4G44_02010 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J4G44_03010 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J4G44_07450 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J4G44_07685 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J4G44_09595 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D J4G44_00365 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D J4G44_03255 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D J4G44_07645 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:atg00540] D J4G44_08265 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D J4G44_01910 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D J4G44_08255 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D J4G44_09410 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D J4G44_09270 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D J4G44_08015 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D J4G44_10005 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D J4G44_09325 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D J4G44_10000 HAD-IIIA family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D J4G44_08020 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D J4G44_01825 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D J4G44_04585 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D J4G44_06675 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D J4G44_03890 lpxO; lipid A hydroxylase LpxO K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:atg00541] D J4G44_02895 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D J4G44_02910 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D J4G44_08825 SDR family NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D J4G44_02900 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D J4G44_00265 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D J4G44_00270 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D J4G44_00255 acyltransferase K21379 vioB; dTDP-4-amino-4,6-dideoxy-D-glucose acyltransferase [EC:2.3.1.209] D J4G44_02915 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8] D J4G44_01755 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D J4G44_02860 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D J4G44_02865 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D J4G44_02875 NAD-dependent epimerase/dehydratase family protein K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426] D J4G44_02830 tviB; Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] C 00550 Peptidoglycan biosynthesis [PATH:atg00550] D J4G44_12280 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D J4G44_09505 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D J4G44_01935 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D J4G44_03590 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D J4G44_01500 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D J4G44_01930 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D J4G44_01495 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D J4G44_08225 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D J4G44_12205 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D J4G44_00075 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D J4G44_05635 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D J4G44_01490 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D J4G44_01940 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D J4G44_06250 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D J4G44_01480 ponA; penicillin-binding protein PBP1a K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D J4G44_10235 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D J4G44_11235 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D J4G44_01505 ftsI; penicillin-binding protein PBP3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D J4G44_07130 dacC; D-alanyl-D-alanine carboxypeptidase PBP5/6 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D J4G44_10170 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:atg00552] D J4G44_12205 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D J4G44_00075 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D J4G44_05635 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:atg00543] D J4G44_05945 pgaC; poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D J4G44_05950 pgaD; poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD K11937 pgaD; biofilm PGA synthesis protein PgaD D J4G44_09905 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:atg00730] D J4G44_03625 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D J4G44_12130 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D J4G44_08390 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D J4G44_11915 thiO; glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19] D J4G44_01105 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D J4G44_07455 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D J4G44_10115 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D J4G44_01745 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D J4G44_04930 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D J4G44_11220 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D J4G44_03080 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:atg00740] D J4G44_01110 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D J4G44_01730 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D J4G44_03475 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D J4G44_01735 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D J4G44_03485 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D J4G44_02390 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D J4G44_02325 msuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D J4G44_03620 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:atg00750] D J4G44_01860 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D J4G44_10815 4-phosphoerythronate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D J4G44_06625 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D J4G44_05085 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D J4G44_06960 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D J4G44_03555 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:atg00760] D J4G44_06910 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D J4G44_04990 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D J4G44_02285 carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D J4G44_02140 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D J4G44_07145 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D J4G44_00015 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D J4G44_10950 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D J4G44_05875 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D J4G44_09070 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D J4G44_02180 pncA; bifunctional nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D J4G44_09370 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D J4G44_10230 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D J4G44_10750 sthA; Si-specific NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D J4G44_00485 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D J4G44_00490 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D J4G44_00480 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] C 00770 Pantothenate and CoA biosynthesis [PATH:atg00770] D J4G44_00315 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D J4G44_00310 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D J4G44_00305 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D J4G44_02720 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D J4G44_02725 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D J4G44_12515 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D J4G44_12510 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D J4G44_05370 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D J4G44_04910 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D J4G44_00015 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D J4G44_05845 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D J4G44_03985 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D J4G44_00425 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D J4G44_00105 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J4G44_05755 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D J4G44_08140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:atg00780] D J4G44_05430 bioC; malonyl-ACP O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D J4G44_12110 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D J4G44_05485 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J4G44_09540 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J4G44_08260 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D J4G44_00115 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D J4G44_05415 hydrolase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D J4G44_05425 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D J4G44_05420 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D J4G44_05435 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D J4G44_07420 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D J4G44_07755 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D J4G44_05375 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:atg00785] D J4G44_05700 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D J4G44_10755 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D J4G44_04825 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_05920 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_01895 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D J4G44_01890 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D J4G44_05910 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D J4G44_05915 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D J4G44_08735 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:atg00790] D J4G44_06440 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D J4G44_06055 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D J4G44_09655 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D J4G44_09650 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D J4G44_12520 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D J4G44_06035 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D J4G44_12820 sul2; sulfonamide-resistant dihydropteroate synthase Sul2 K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15] D J4G44_12915 sul2; sulfonamide-resistant dihydropteroate synthase Sul2 K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15] D J4G44_00725 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D J4G44_12860 dfrA20; trimethoprim-resistant dihydrofolate reductase DfrA20 K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D J4G44_04960 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D J4G44_01110 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D J4G44_01730 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D J4G44_12260 pabB; aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D J4G44_06885 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D J4G44_08065 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D J4G44_06835 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D J4G44_06830 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D J4G44_10690 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] C 00670 One carbon pool by folate [PATH:atg00670] D J4G44_00725 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D J4G44_12860 dfrA20; trimethoprim-resistant dihydrofolate reductase DfrA20 K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D J4G44_06075 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D J4G44_10365 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D J4G44_06690 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D J4G44_09870 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D J4G44_02715 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D J4G44_06185 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D J4G44_00720 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D J4G44_12865 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D J4G44_04665 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D J4G44_10785 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D J4G44_11165 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:atg00860] D J4G44_01530 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J4G44_05810 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D J4G44_10110 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D J4G44_11910 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D J4G44_03665 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D J4G44_03670 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D J4G44_06415 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D J4G44_01120 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D J4G44_01115 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D J4G44_12115 hemJ; protoporphyrinogen oxidase HemJ K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D J4G44_04260 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D J4G44_05675 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D J4G44_09770 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D J4G44_00145 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D J4G44_07730 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D J4G44_07745 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D J4G44_07735 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D J4G44_07740 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D J4G44_01380 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D J4G44_05410 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:atg00130] D J4G44_06470 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D J4G44_06475 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D J4G44_10980 FAD-dependent monooxygenase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D J4G44_02310 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D J4G44_10985 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D J4G44_04115 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D J4G44_09645 coq7; 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D J4G44_04695 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D J4G44_05835 flavodoxin family protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:atg00900] D J4G44_01105 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D J4G44_08235 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D J4G44_09310 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D J4G44_05795 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D J4G44_09290 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D J4G44_00045 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D J4G44_01350 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D J4G44_05175 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_05205 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_08955 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09545 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_11705 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D J4G44_05645 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D J4G44_08225 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:atg00903] D J4G44_08140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D J4G44_02000 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] C 00907 Pinene, camphor and geraniol degradation [PATH:atg00907] D J4G44_03885 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D J4G44_05170 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J4G44_02260 NAD(P)-dependent alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D J4G44_04360 long-chain-acyl-CoA synthetase K13776 atuH; citronellyl-CoA synthetase [EC:6.2.1.-] D J4G44_07385 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D J4G44_03880 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D J4G44_07810 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis [PATH:atg00253] D J4G44_12795 tetracycline-inactivating monooxygenase Tet(X3) K18221 tetX; tetracycline 11a-monooxygenase, tetracycline resistance protein [EC:1.14.13.231] C 00523 Polyketide sugar unit biosynthesis [PATH:atg00523] D J4G44_00265 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D J4G44_00270 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D J4G44_02735 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21] C 01055 Biosynthesis of vancomycin group antibiotics [PATH:atg01055] D J4G44_00650 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D J4G44_00270 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:atg00332] D J4G44_07040 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D J4G44_00570 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:atg00261] D J4G44_00650 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D J4G44_06320 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D J4G44_06315 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D J4G44_07285 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D J4G44_04570 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D J4G44_02195 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D J4G44_02795 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:atg00521] D J4G44_12005 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D J4G44_01100 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D J4G44_00265 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D J4G44_00270 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:atg00525] D J4G44_00265 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D J4G44_00270 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:atg00401] D J4G44_10200 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D J4G44_06985 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D J4G44_10205 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J4G44_12265 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D J4G44_03720 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D J4G44_06460 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D J4G44_05480 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D J4G44_05485 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J4G44_09540 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J4G44_00115 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D J4G44_05490 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:atg00999] D J4G44_07805 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D J4G44_01130 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:atg00362] D J4G44_08910 benA; benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D J4G44_08915 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D J4G44_08920 ring-hydroxylating dioxygenase ferredoxin reductase family protein K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D J4G44_08925 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D J4G44_06390 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D J4G44_08905 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D J4G44_08895 muconate/chloromuconate family cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D J4G44_08900 catC; muconolactone Delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4] D J4G44_08950 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D J4G44_08935 3-oxoacid CoA-transferase subunit A K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6] D J4G44_08940 CoA transferase subunit B K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6] D J4G44_03880 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D J4G44_08945 pcaF; 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D J4G44_06360 phenol hydroxylase K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0 D J4G44_06365 aromatic/alkene monooxygenase hydroxylase subunit beta K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243] D J4G44_06370 MmoB/DmpM family protein K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243] D J4G44_06375 aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243] D J4G44_06380 phenol hydroxylase K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243] D J4G44_06385 2Fe-2S iron-sulfur cluster binding domain-containing protein K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243] D J4G44_04400 alpha/beta fold hydrolase K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9] D J4G44_04380 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D J4G44_04390 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D J4G44_04385 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D J4G44_10760 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D J4G44_04440 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D J4G44_08365 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D J4G44_05170 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D J4G44_03885 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D J4G44_09365 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D J4G44_05175 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_05205 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_08955 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09545 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:atg00627] D J4G44_00835 NAD(P)/FAD-dependent oxidoreductase K10215 ethA; monooxygenase [EC:1.14.13.-] D J4G44_09015 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00364 Fluorobenzoate degradation [PATH:atg00364] D J4G44_08910 benA; benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D J4G44_08915 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D J4G44_08920 ring-hydroxylating dioxygenase ferredoxin reductase family protein K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D J4G44_08925 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D J4G44_06390 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D J4G44_08905 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D J4G44_08895 muconate/chloromuconate family cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00625 Chloroalkane and chloroalkene degradation [PATH:atg00625] D J4G44_07845 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D J4G44_05690 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J4G44_09515 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J4G44_08750 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D J4G44_08140 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:atg00361] D J4G44_06360 phenol hydroxylase K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0 D J4G44_06365 aromatic/alkene monooxygenase hydroxylase subunit beta K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243] D J4G44_06370 MmoB/DmpM family protein K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243] D J4G44_06375 aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243] D J4G44_06380 phenol hydroxylase K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243] D J4G44_06385 2Fe-2S iron-sulfur cluster binding domain-containing protein K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243] D J4G44_06390 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D J4G44_08905 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D J4G44_08895 muconate/chloromuconate family cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00623 Toluene degradation [PATH:atg00623] D J4G44_06360 phenol hydroxylase K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0 D J4G44_06365 aromatic/alkene monooxygenase hydroxylase subunit beta K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243] D J4G44_06370 MmoB/DmpM family protein K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243] D J4G44_06375 aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243] D J4G44_06380 phenol hydroxylase K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243] D J4G44_06385 2Fe-2S iron-sulfur cluster binding domain-containing protein K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243] D J4G44_06390 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D J4G44_08905 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D J4G44_08895 muconate/chloromuconate family cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00622 Xylene degradation [PATH:atg00622] D J4G44_08910 benA; benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D J4G44_08915 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D J4G44_08920 ring-hydroxylating dioxygenase ferredoxin reductase family protein K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D J4G44_08925 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D J4G44_04400 alpha/beta fold hydrolase K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9] D J4G44_04390 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D J4G44_04385 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D J4G44_04380 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00633 Nitrotoluene degradation [PATH:atg00633] D J4G44_09420 nfsB; oxygen-insensitive NAD(P)H nitroreductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34] C 00642 Ethylbenzene degradation D J4G44_03880 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:atg00643] D J4G44_09015 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D J4G44_04400 alpha/beta fold hydrolase K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9] C 00791 Atrazine degradation C 00930 Caprolactam degradation [PATH:atg00930] D J4G44_09260 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D J4G44_02000 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D J4G44_03885 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D J4G44_05170 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:atg00621] D J4G44_04380 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D J4G44_04390 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D J4G44_04385 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] C 00626 Naphthalene degradation [PATH:atg00626] D J4G44_07845 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D J4G44_05690 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J4G44_09515 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D J4G44_08750 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:atg03020] D J4G44_03785 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D J4G44_03790 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D J4G44_00845 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D J4G44_01360 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:atg03010] D J4G44_08095 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D J4G44_10725 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D J4G44_00940 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D J4G44_00850 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D J4G44_00885 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D J4G44_09775 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D J4G44_12095 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D J4G44_00900 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D J4G44_05070 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D J4G44_00975 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D J4G44_00855 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D J4G44_12100 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D J4G44_00860 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D J4G44_00905 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D J4G44_04150 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D J4G44_01310 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D J4G44_00925 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D J4G44_09780 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D J4G44_00950 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D J4G44_08325 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D J4G44_07570 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D J4G44_03770 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D J4G44_00955 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D J4G44_00970 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D J4G44_00965 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D J4G44_00910 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D J4G44_00895 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D J4G44_03780 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D J4G44_09785 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D J4G44_03775 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D J4G44_03765 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D J4G44_05075 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D J4G44_00920 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D J4G44_00875 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D J4G44_00935 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D J4G44_00840 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D J4G44_00890 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D J4G44_01295 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D J4G44_12430 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D J4G44_05650 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D J4G44_00945 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D J4G44_00960 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D J4G44_00915 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D J4G44_05765 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D J4G44_05655 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D J4G44_04650 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D J4G44_00930 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D J4G44_00880 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D J4G44_01190 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D J4G44_07190 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D J4G44_05475 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D J4G44_04645 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D J4G44_02595 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D J4G44_12435 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D J4G44_00865 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D J4G44_11245 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D J4G44_02660 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J4G44_02440 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J4G44_03305 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J4G44_04800 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J4G44_12320 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J4G44_05030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J4G44_08560 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J4G44_12305 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J4G44_08575 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J4G44_05045 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J4G44_03320 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J4G44_04815 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J4G44_02425 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J4G44_02675 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J4G44_12300 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J4G44_08580 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J4G44_05050 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J4G44_04820 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J4G44_03325 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J4G44_02680 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J4G44_02420 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:atg00970] D J4G44_05040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J4G44_04810 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J4G44_02670 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J4G44_02430 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J4G44_12310 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J4G44_08570 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J4G44_03315 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J4G44_01535 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J4G44_00760 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J4G44_00755 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J4G44_00765 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J4G44_05000 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J4G44_10675 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J4G44_06970 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D J4G44_06490 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D J4G44_06500 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D J4G44_06505 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D J4G44_11415 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J4G44_11405 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J4G44_11395 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J4G44_11420 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J4G44_06070 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D J4G44_05785 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J4G44_05790 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J4G44_05780 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J4G44_05775 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J4G44_01540 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J4G44_10895 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J4G44_10890 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J4G44_10880 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J4G44_10900 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J4G44_10905 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J4G44_01765 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J4G44_10010 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J4G44_03735 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J4G44_02945 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J4G44_05005 tRNA-His K14226 tRNA-His; tRNA His D J4G44_02665 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J4G44_02435 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J4G44_05035 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J4G44_03310 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J4G44_12315 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J4G44_08565 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J4G44_04805 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J4G44_00375 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J4G44_06050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J4G44_07605 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J4G44_04015 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J4G44_06065 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J4G44_07615 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J4G44_04345 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J4G44_04355 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J4G44_04350 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J4G44_04020 tRNA-Met K14230 tRNA-Met; tRNA Met D J4G44_07715 tRNA-Ile K14230 tRNA-Met; tRNA Met D J4G44_05860 tRNA-Met K14230 tRNA-Met; tRNA Met D J4G44_04030 tRNA-Met K14230 tRNA-Met; tRNA Met D J4G44_05870 tRNA-Met K14230 tRNA-Met; tRNA Met D J4G44_04025 tRNA-Met K14230 tRNA-Met; tRNA Met D J4G44_01610 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D J4G44_01605 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D J4G44_04995 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J4G44_05010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J4G44_10845 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J4G44_00770 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J4G44_01715 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J4G44_06170 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J4G44_03125 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J4G44_03725 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J4G44_03740 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J4G44_07610 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D J4G44_03750 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D J4G44_03730 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D J4G44_11390 tRNA-Val K14237 tRNA-Val; tRNA Val D J4G44_11410 tRNA-Val K14237 tRNA-Val; tRNA Val D J4G44_11400 tRNA-Val K14237 tRNA-Val; tRNA Val D J4G44_11425 tRNA-Val K14237 tRNA-Val; tRNA Val D J4G44_07240 tRNA-Val K14237 tRNA-Val; tRNA Val D J4G44_01530 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J4G44_11795 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D J4G44_11800 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D J4G44_11790 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D J4G44_09400 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D J4G44_07290 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D J4G44_00235 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D J4G44_04325 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D J4G44_04320 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D J4G44_12465 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D J4G44_05670 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D J4G44_10015 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D J4G44_11540 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D J4G44_02715 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D J4G44_05585 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D J4G44_00325 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D J4G44_02395 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D J4G44_06295 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D J4G44_03020 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D J4G44_11500 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D J4G44_00040 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D J4G44_12420 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D J4G44_12415 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D J4G44_02655 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D J4G44_05960 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:atg03060] D J4G44_00870 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D J4G44_03755 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D J4G44_04010 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D J4G44_00415 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D J4G44_00420 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D J4G44_00410 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D J4G44_02580 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J4G44_04975 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D J4G44_04915 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D J4G44_05365 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D J4G44_08275 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D J4G44_08540 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D J4G44_00685 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D J4G44_00690 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D J4G44_00695 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D J4G44_06930 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D J4G44_02400 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:atg04122] D J4G44_08390 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D J4G44_02135 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D J4G44_04220 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D J4G44_07475 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D J4G44_08830 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D J4G44_08845 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D J4G44_07110 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D J4G44_09665 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D J4G44_07460 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:atg03018] D J4G44_04485 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D J4G44_04365 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D J4G44_07485 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D J4G44_09320 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J4G44_04155 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D J4G44_00775 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D J4G44_12400 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D J4G44_02480 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D J4G44_06110 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J4G44_07920 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D J4G44_02175 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D J4G44_06255 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D J4G44_00005 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:atg03030] D J4G44_10940 dnaQ; DNA polymerase III subunit epsilon K14159 rnhA-dnaQ; ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7] D J4G44_09895 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J4G44_09525 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J4G44_08025 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J4G44_00335 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J4G44_03505 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D J4G44_02605 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J4G44_09790 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D J4G44_05815 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D J4G44_03095 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J4G44_07275 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D J4G44_12365 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J4G44_05400 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:atg03410] D J4G44_11205 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D J4G44_08070 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D J4G44_02240 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D J4G44_05250 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D J4G44_02255 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D J4G44_01985 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D J4G44_12365 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J4G44_01855 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D J4G44_05400 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:atg03420] D J4G44_08350 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D J4G44_03075 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D J4G44_07000 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D J4G44_03905 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D J4G44_04620 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J4G44_12365 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J4G44_05400 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:atg03430] D J4G44_09950 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D J4G44_07910 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D J4G44_04620 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J4G44_13140 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D J4G44_10570 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D J4G44_13145 exodeoxyribonuclease VII K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D J4G44_10375 DUF3820 family protein K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D J4G44_01855 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D J4G44_03095 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J4G44_09895 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J4G44_02605 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J4G44_09525 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J4G44_00335 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J4G44_08025 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J4G44_10940 dnaQ; DNA polymerase III subunit epsilon K14159 rnhA-dnaQ; ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7] D J4G44_03505 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D J4G44_05400 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:atg03440] D J4G44_01855 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D J4G44_03095 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J4G44_02610 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D J4G44_06955 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D J4G44_08470 recR; recombination protein RecR K06187 recR; recombination protein RecR D J4G44_08285 recA; recombinase RecA K03553 recA; recombination protein RecA D J4G44_12365 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J4G44_06790 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D J4G44_06785 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D J4G44_07770 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D J4G44_01045 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D J4G44_04140 UvrD-helicase domain-containing protein K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D J4G44_04135 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D J4G44_04145 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D J4G44_09895 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J4G44_02605 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J4G44_09525 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J4G44_00335 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J4G44_08025 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J4G44_10940 dnaQ; DNA polymerase III subunit epsilon K14159 rnhA-dnaQ; ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7] D J4G44_03505 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D J4G44_04195 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:atg03250] D J4G44_02445 peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:atg02010] D J4G44_06880 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D J4G44_01520 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D J4G44_06870 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D J4G44_06865 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D J4G44_06860 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D J4G44_02355 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D J4G44_02360 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D J4G44_02370 ssuC; aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein D J4G44_02375 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D J4G44_11725 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D J4G44_11730 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D J4G44_11720 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D J4G44_01075 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D J4G44_01080 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D J4G44_01085 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D J4G44_01070 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D J4G44_01090 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D J4G44_07060 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D J4G44_07065 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D J4G44_07070 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D J4G44_07075 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D J4G44_09880 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D J4G44_09890 ABC transporter permease K02072 metI; D-methionine transport system permease protein D J4G44_09885 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D J4G44_10930 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D J4G44_10925 yejB; microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein D J4G44_10920 ABC transporter permease K13895 yejE; microcin C transport system permease protein D J4G44_10915 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D J4G44_03200 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D J4G44_03185 znuB; zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein D J4G44_03190 znuC; zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D J4G44_06655 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D J4G44_06660 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D J4G44_03515 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D J4G44_03520 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D J4G44_09985 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D J4G44_08010 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D J4G44_08725 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D J4G44_00350 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D J4G44_13270 msr(E); ABC-F type ribosomal protection protein Msr(E) K18231 msr; macrolide transport system ATP-binding/permease protein D J4G44_13460 ABC-F family ATP-binding cassette domain-containing protein K18231 msr; macrolide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:atg02060] D J4G44_04480 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D J4G44_12500 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr C 03070 Bacterial secretion system [PATH:atg03070] D J4G44_03635 TolC family outer membrane protein K12340 tolC; outer membrane protein D J4G44_03705 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D J4G44_03700 PDZ domain-containing protein K02452 gspC; general secretion pathway protein C D J4G44_04200 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D J4G44_04205 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D J4G44_08045 prepilin-type N-terminal cleavage/methylation domain-containing protein K02456 gspG; general secretion pathway protein G D J4G44_08050 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I D J4G44_08055 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J D J4G44_08060 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K D J4G44_07510 general secretion pathway protein GspL K02461 gspL; general secretion pathway protein L D J4G44_10270 type II/IV secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D J4G44_12345 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D J4G44_00415 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D J4G44_00420 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D J4G44_03755 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D J4G44_04010 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D J4G44_00870 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D J4G44_00410 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D J4G44_02580 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J4G44_04975 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D J4G44_08540 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D J4G44_04915 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D J4G44_05365 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D J4G44_00685 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D J4G44_00690 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D J4G44_00695 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D J4G44_03135 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG B B 09132 Signal transduction C 02020 Two-component system [PATH:atg02020] D J4G44_02125 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D J4G44_02120 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D J4G44_06055 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D J4G44_07060 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D J4G44_01585 HAMP domain-containing protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D J4G44_01580 ompR; two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D J4G44_05525 bfmS; sensor histidine kinase BfmS K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D J4G44_05520 bfmR; response regulator transcription factor BfmR K07661 rstA; two-component system, OmpR family, response regulator RstA D J4G44_06915 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D J4G44_00185 baeS; sensor histidine kinase efflux regulator BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D J4G44_00180 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D J4G44_03370 mdtD; multidrug transporter subunit MdtD K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein D J4G44_08645 sensor histidine kinase N-terminal domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D J4G44_08650 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB D J4G44_02600 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D J4G44_03030 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D J4G44_03655 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D J4G44_03660 response regulator transcription factor K08083 algR; two-component system, LytTR family, response regulator AlgR D J4G44_00455 response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D J4G44_03545 response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D J4G44_07280 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D J4G44_00095 molecular chaperone K07346 fimC; fimbrial chaperone protein D J4G44_00090 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D J4G44_07655 glnD; [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D J4G44_08205 PAS domain-containing protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D J4G44_08200 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D J4G44_06465 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J4G44_11880 sigma-54-dependent Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D J4G44_05175 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_05205 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_08955 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09545 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_03540 histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D J4G44_03535 sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D J4G44_12295 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D J4G44_01405 pilin K02650 pilA; type IV pilus assembly protein PilA D J4G44_01410 pilin K02650 pilA; type IV pilus assembly protein PilA D J4G44_11465 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D J4G44_11470 purine-binding chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D J4G44_11480 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG D J4G44_11475 response regulator K02658 pilH; twitching motility two-component system response regulator PilH D J4G44_07330 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D J4G44_09195 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D J4G44_09200 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D J4G44_09205 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D J4G44_03635 TolC family outer membrane protein K12340 tolC; outer membrane protein D J4G44_02825 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein D J4G44_09510 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D J4G44_02820 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D J4G44_02815 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D J4G44_02860 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D J4G44_02865 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:atg02024] D J4G44_07920 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D J4G44_03720 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D J4G44_06460 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D J4G44_08745 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D J4G44_09280 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D J4G44_08645 sensor histidine kinase N-terminal domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D J4G44_08650 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB D J4G44_03415 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J4G44_11895 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J4G44_07330 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D J4G44_03195 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D J4G44_01110 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D J4G44_03475 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D J4G44_01165 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D J4G44_05620 adeK; multidrug efflux RND transporter AdeIJK outer membrane channel subunit AdeK K18139 oprM; outer membrane protein, multidrug efflux system D J4G44_02580 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J4G44_03755 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D J4G44_04010 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D J4G44_00870 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D J4G44_00410 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D J4G44_04975 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D J4G44_08540 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D J4G44_04915 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D J4G44_05365 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D J4G44_10405 OmpA family protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:atg02040] D J4G44_10405 OmpA family protein K02557 motB; chemotaxis protein MotB D J4G44_05710 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D J4G44_12295 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D J4G44_09320 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:atg04980] D J4G44_00145 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D J4G44_06185 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:atg01501] D J4G44_05555 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D J4G44_07175 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D J4G44_00555 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D J4G44_05630 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J4G44_05625 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D J4G44_06125 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D J4G44_05620 adeK; multidrug efflux RND transporter AdeIJK outer membrane channel subunit AdeK K18139 oprM; outer membrane protein, multidrug efflux system D J4G44_13010 adeS; two-component sensor histidine kinase AdeS K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3] D J4G44_13015 adeR; efflux system response regulator transcription factor AdeR K18144 adeR; two-component system, OmpR family, response regulator AdeR D J4G44_12995 efflux RND transporter periplasmic adaptor subunit K18145 adeA; membrane fusion protein, multidrug efflux system D J4G44_13000 multidrug efflux RND transporter permease subunit K18146 adeB; multidrug efflux pump D J4G44_03635 TolC family outer membrane protein K12340 tolC; outer membrane protein D J4G44_01480 ponA; penicillin-binding protein PBP1a K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D J4G44_11235 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D J4G44_01505 ftsI; penicillin-binding protein PBP3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D J4G44_13030 carbapenem-hydrolyzing class D beta-lactamase OXA-58 K18972 blaOXA-58; beta-lactamase class D OXA-58 [EC:3.5.2.6] C 01502 Vancomycin resistance [PATH:atg01502] D J4G44_01930 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D J4G44_09800 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D J4G44_01495 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D J4G44_01490 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D J4G44_01940 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:atg01503] D J4G44_06915 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D J4G44_02305 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D J4G44_02445 peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D J4G44_05630 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J4G44_05625 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D J4G44_06125 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D J4G44_03635 TolC family outer membrane protein K12340 tolC; outer membrane protein D J4G44_08265 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:atg01000] C 01001 Protein kinases [BR:atg01001] D J4G44_01775 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D J4G44_02930 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D J4G44_12585 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D J4G44_13135 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D J4G44_02815 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D J4G44_02125 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D J4G44_01585 HAMP domain-containing protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D J4G44_05525 bfmS; sensor histidine kinase BfmS K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D J4G44_00185 baeS; sensor histidine kinase efflux regulator BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D J4G44_08645 sensor histidine kinase N-terminal domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D J4G44_13010 adeS; two-component sensor histidine kinase AdeS K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3] D J4G44_11100 GHKL domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D J4G44_10255 two-component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D J4G44_00455 response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D J4G44_03655 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D J4G44_08205 PAS domain-containing protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D J4G44_03540 histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:atg01009] D J4G44_10780 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D J4G44_03835 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D J4G44_02165 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:atg01002] D J4G44_02400 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D J4G44_03990 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D J4G44_02985 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D J4G44_07530 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D J4G44_01435 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D J4G44_01760 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D J4G44_09600 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D J4G44_00785 M3 family metallopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70] D J4G44_09165 insulinase family protein K06972 PITRM1; presequence protease [EC:3.4.24.-] D J4G44_08530 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D J4G44_08535 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D J4G44_10150 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D J4G44_03510 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D J4G44_11450 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D J4G44_02245 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D J4G44_08180 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D J4G44_10730 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D J4G44_11000 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D J4G44_06030 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D J4G44_06140 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D J4G44_07550 M48 family metalloprotease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D J4G44_08240 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D J4G44_06915 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D J4G44_06520 trypsin-like peptidase domain-containing protein K04691 hhoB; serine protease DegS [EC:3.4.21.-] D J4G44_07130 dacC; D-alanyl-D-alanine carboxypeptidase PBP5/6 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D J4G44_10170 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D J4G44_03550 serine hydrolase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D J4G44_00625 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D J4G44_11170 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D J4G44_08700 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D J4G44_13155 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D J4G44_06930 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D J4G44_00550 carboxy terminal-processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D J4G44_03530 PDZ domain-containing protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D J4G44_06680 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D J4G44_07085 sohB; protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-] D J4G44_10330 yegQ; tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-] C 01003 Glycosyltransferases [BR:atg01003] D J4G44_06250 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D J4G44_10235 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D J4G44_01480 ponA; penicillin-binding protein PBP1a K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D J4G44_05945 pgaC; poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:atg01005] D J4G44_08265 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D J4G44_09270 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D J4G44_01910 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D J4G44_08255 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D J4G44_09410 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D J4G44_08015 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D J4G44_04585 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D J4G44_06675 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D J4G44_03890 lpxO; lipid A hydroxylase LpxO K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D J4G44_01825 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D J4G44_09325 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D J4G44_08020 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D J4G44_10000 HAD-IIIA family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D J4G44_10005 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D J4G44_02880 glycosyltransferase family 4 protein K13007 wbpL; glycosyltransferase WbpL [EC:2.4.1.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:atg01011] D J4G44_12280 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D J4G44_09505 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D J4G44_01935 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D J4G44_03590 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D J4G44_01500 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D J4G44_01930 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D J4G44_09800 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D J4G44_04250 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D J4G44_01490 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D J4G44_01940 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D J4G44_12205 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D J4G44_00075 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D J4G44_05635 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D J4G44_02275 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D J4G44_01480 ponA; penicillin-binding protein PBP1a K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D J4G44_10235 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D J4G44_11235 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D J4G44_01505 ftsI; penicillin-binding protein PBP3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D J4G44_07130 dacC; D-alanyl-D-alanine carboxypeptidase PBP5/6 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D J4G44_10170 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D J4G44_03550 serine hydrolase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D J4G44_06250 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D J4G44_02245 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D J4G44_04745 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D J4G44_10700 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D J4G44_06890 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D J4G44_10705 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D J4G44_02280 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:atg01004] D J4G44_05480 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D J4G44_12110 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D J4G44_05485 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J4G44_09540 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D J4G44_08260 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D J4G44_00115 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D J4G44_06230 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D J4G44_01020 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D J4G44_04855 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D J4G44_00155 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D J4G44_10080 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D J4G44_01810 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J4G44_09675 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D J4G44_04360 long-chain-acyl-CoA synthetase K13776 atuH; citronellyl-CoA synthetase [EC:6.2.1.-] D J4G44_03415 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J4G44_11895 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J4G44_07415 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D J4G44_01025 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D J4G44_08970 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] C 01008 Polyketide biosynthesis proteins [BR:atg01008] D J4G44_00650 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] C 01006 Prenyltransferases [BR:atg01006] D J4G44_11705 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D J4G44_05645 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D J4G44_08225 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D J4G44_07915 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D J4G44_06475 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D J4G44_09770 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:atg01007] D J4G44_01530 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J4G44_09400 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D J4G44_03605 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D J4G44_02655 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D J4G44_05960 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D J4G44_10015 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D J4G44_03020 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D J4G44_11540 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D J4G44_02395 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D J4G44_05585 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D J4G44_00325 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D J4G44_06295 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D J4G44_00235 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D J4G44_00040 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D J4G44_04325 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D J4G44_04320 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D J4G44_05670 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D J4G44_11500 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D J4G44_12465 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D J4G44_07290 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D J4G44_12420 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D J4G44_12415 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D J4G44_06985 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D J4G44_07635 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D J4G44_02100 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14287 ybdL; methionine transaminase [EC:2.6.1.88] D J4G44_07650 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D J4G44_10205 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J4G44_12265 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D J4G44_05425 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D J4G44_07160 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D J4G44_07050 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D J4G44_05420 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D J4G44_10110 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D J4G44_00105 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D J4G44_06625 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:atg00194] D J4G44_03245 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D J4G44_03240 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D J4G44_03235 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D J4G44_03230 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D J4G44_03225 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D J4G44_03220 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D J4G44_03215 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D J4G44_03210 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D J4G44_03205 ATP synthase subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:atg03000] D J4G44_00590 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J4G44_01155 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J4G44_13330 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J4G44_09265 AraC family transcriptional regulator K21747 alkR; AraC family transcriptional regulator, alkane utilization regulator D J4G44_07865 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D J4G44_06265 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D J4G44_04410 hcaR; DNA-binding transcriptional regulator HcaR K05817 hcaR; LysR family transcriptional regulator, hca operon transcriptional activator D J4G44_06855 CysB family HTH-type transcriptional regulator K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator D J4G44_08890 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D J4G44_11145 lldR; transcriptional regulator LldR K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator D J4G44_02380 TetR family transcriptional regulator C-terminal domain-containing protein K09017 rutR; TetR/AcrR family transcriptional regulator D J4G44_02765 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D J4G44_10090 fabR; HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D J4G44_07695 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D J4G44_11060 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D J4G44_11960 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D J4G44_03195 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D J4G44_07330 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D J4G44_08395 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D J4G44_01000 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D J4G44_10320 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D J4G44_05375 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D J4G44_09865 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D J4G44_11025 helix-turn-helix domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D J4G44_12620 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D J4G44_08685 helix-turn-helix domain-containing protein K07726 K07726; putative transcriptional regulator D J4G44_09940 helix-turn-helix domain-containing protein K07726 K07726; putative transcriptional regulator D J4G44_13080 helix-turn-helix domain-containing protein K07726 K07726; putative transcriptional regulator D J4G44_13275 helix-turn-helix domain-containing protein K07726 K07726; putative transcriptional regulator D J4G44_13495 helix-turn-helix domain-containing protein K07726 K07726; putative transcriptional regulator D J4G44_12740 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D J4G44_01185 type II toxin-antitoxin system RelB/DinJ family antitoxin K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D J4G44_07895 type II toxin-antitoxin system RelB/DinJ family antitoxin K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D J4G44_10990 type II toxin-antitoxin system RelB/DinJ family antitoxin K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D J4G44_13380 type II toxin-antitoxin system RelB/DinJ family antitoxin K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D J4G44_13535 type II toxin-antitoxin system RelB/DinJ family antitoxin K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D J4G44_02560 metal/formaldehyde-sensitive transcriptional repressor K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression D J4G44_02950 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D J4G44_07995 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D J4G44_13240 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D J4G44_03080 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D J4G44_10360 rnk; nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D J4G44_10665 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein D J4G44_03940 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D J4G44_03610 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D J4G44_03470 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D J4G44_10620 hypothetical protein K22302 dicC; transcriptional repressor of cell division inhibition gene dicB C 03021 Transcription machinery [BR:atg03021] D J4G44_00845 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D J4G44_03785 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D J4G44_03790 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D J4G44_01360 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D J4G44_05710 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D J4G44_06730 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D J4G44_07470 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D J4G44_12295 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D J4G44_10100 rapA; RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D J4G44_04040 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D J4G44_01740 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D J4G44_03760 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D J4G44_05065 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A D J4G44_05060 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B D J4G44_03610 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D J4G44_05995 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D J4G44_06165 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D J4G44_12400 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:atg03019] D J4G44_04365 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D J4G44_11765 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D J4G44_06940 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D J4G44_00775 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D J4G44_04935 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D J4G44_07485 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D J4G44_09320 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J4G44_04155 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D J4G44_12400 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D J4G44_02480 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D J4G44_06110 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J4G44_07920 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D J4G44_02175 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D J4G44_06255 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D J4G44_00005 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D J4G44_04485 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D J4G44_07280 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D J4G44_08335 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A D J4G44_12505 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ D J4G44_10025 DUF3418 domain-containing protein K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:atg03011] D J4G44_08095 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D J4G44_10725 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D J4G44_00940 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D J4G44_00850 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D J4G44_00885 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D J4G44_09775 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D J4G44_12095 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D J4G44_00900 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D J4G44_05070 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D J4G44_00975 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D J4G44_00855 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D J4G44_12100 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D J4G44_00860 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D J4G44_00905 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D J4G44_04150 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D J4G44_01310 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D J4G44_00925 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D J4G44_09780 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D J4G44_00950 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D J4G44_08325 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D J4G44_07570 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D J4G44_03770 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D J4G44_00955 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D J4G44_00970 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D J4G44_00965 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D J4G44_00910 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D J4G44_00895 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D J4G44_09785 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D J4G44_03775 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D J4G44_03765 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D J4G44_03780 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D J4G44_05075 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D J4G44_00920 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D J4G44_00875 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D J4G44_00935 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D J4G44_00840 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D J4G44_00890 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D J4G44_01295 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D J4G44_12430 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D J4G44_05650 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D J4G44_00945 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D J4G44_00960 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D J4G44_00915 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D J4G44_05655 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D J4G44_04650 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D J4G44_00930 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D J4G44_00880 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D J4G44_01190 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D J4G44_07190 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D J4G44_05475 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D J4G44_04645 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D J4G44_02595 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D J4G44_12435 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D J4G44_00865 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D J4G44_11245 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D J4G44_05765 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D J4G44_12300 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J4G44_08580 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J4G44_05050 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J4G44_04820 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J4G44_03325 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J4G44_02680 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J4G44_02420 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J4G44_02660 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J4G44_02440 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J4G44_03305 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J4G44_04800 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J4G44_12320 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J4G44_05030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J4G44_08560 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J4G44_12305 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J4G44_08575 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J4G44_05045 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J4G44_03320 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J4G44_04815 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J4G44_02425 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J4G44_02675 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:atg03009] D J4G44_06940 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D J4G44_04935 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D J4G44_06945 era; GTPase Era K03595 era; GTPase D J4G44_07035 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D J4G44_03610 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D J4G44_04040 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D J4G44_01740 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D J4G44_03760 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D J4G44_07880 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D J4G44_05090 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D J4G44_02710 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D J4G44_05225 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D J4G44_11240 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D J4G44_01820 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D J4G44_10790 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D J4G44_07985 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D J4G44_01515 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D J4G44_10970 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D J4G44_12200 class I SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D J4G44_01485 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D J4G44_03975 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D J4G44_06025 rlmE; 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D J4G44_11180 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D J4G44_04785 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D J4G44_07350 rlmKL; bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D J4G44_00060 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D J4G44_00435 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D J4G44_05320 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D J4G44_07900 pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D J4G44_10105 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D J4G44_05440 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D J4G44_04370 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D J4G44_05825 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D J4G44_10160 rRNA large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D J4G44_12835 erm; 23S ribosomal RNA methyltransferase Erm K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184] D J4G44_12075 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D J4G44_01305 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D J4G44_08210 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D J4G44_08680 OsmC domain/YcaO domain-containing protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D J4G44_09855 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D J4G44_09220 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D J4G44_09480 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D J4G44_04365 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D J4G44_11765 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D J4G44_03935 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D J4G44_04930 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D J4G44_00025 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D J4G44_05125 hflX; GTPase HflX K03665 hflX; GTPase D J4G44_03275 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D J4G44_01365 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D J4G44_04050 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D J4G44_04035 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D J4G44_00475 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D J4G44_04730 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D J4G44_06020 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein D J4G44_12495 ribosome-associated protein K09889 yjgA; ribosome-associated protein D J4G44_12290 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D J4G44_07680 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D J4G44_05470 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:atg03016] D J4G44_04750 ribonuclease I K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] D J4G44_10805 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D J4G44_01530 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J4G44_11500 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D J4G44_02395 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D J4G44_00325 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D J4G44_11540 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D J4G44_09400 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D J4G44_03020 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D J4G44_06295 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D J4G44_00235 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D J4G44_07290 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D J4G44_12465 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D J4G44_05670 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D J4G44_10015 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D J4G44_05585 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D J4G44_00040 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D J4G44_12420 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D J4G44_12415 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D J4G44_02655 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D J4G44_05960 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D J4G44_02145 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D J4G44_08440 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D J4G44_07440 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D J4G44_10280 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D J4G44_04550 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D J4G44_01275 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D J4G44_08390 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D J4G44_03275 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D J4G44_07915 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D J4G44_02575 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D J4G44_09835 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D J4G44_08310 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D J4G44_02590 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D J4G44_05855 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D J4G44_10870 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D J4G44_02295 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D J4G44_08475 HRDC domain-containing protein K03684 rnd; ribonuclease D [EC:3.1.13.5] D J4G44_01550 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D J4G44_04325 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D J4G44_04320 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D J4G44_03605 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D J4G44_08595 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D J4G44_08080 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D J4G44_00510 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D J4G44_10065 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D J4G44_05355 tRNA-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D J4G44_04740 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D J4G44_07425 class I SAM-dependent methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D J4G44_09375 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D J4G44_01300 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D J4G44_09900 RNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D J4G44_05680 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D J4G44_06735 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D J4G44_05320 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D J4G44_07900 pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D J4G44_10105 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D J4G44_07110 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D J4G44_06150 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D J4G44_04220 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D J4G44_07475 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D J4G44_08830 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D J4G44_08845 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D J4G44_08380 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D J4G44_05280 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D J4G44_06965 tRNA-(ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D J4G44_04875 mnmC; FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D J4G44_00380 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D J4G44_06830 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D J4G44_08065 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D J4G44_06835 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D J4G44_10690 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D J4G44_07760 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D J4G44_00405 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D J4G44_12380 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D J4G44_12210 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D J4G44_07575 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D J4G44_07905 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D J4G44_00515 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D J4G44_00775 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D J4G44_04155 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D J4G44_05295 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:atg03012] D J4G44_04045 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D J4G44_12460 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D J4G44_02625 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D J4G44_13310 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D J4G44_10720 elongation factor Ts K02357 tsf; elongation factor Ts D J4G44_03745 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D J4G44_12085 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D J4G44_12090 fusA; elongation factor G K02355 fusA; elongation factor G D J4G44_09710 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D J4G44_08220 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D J4G44_09705 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D J4G44_05760 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D J4G44_04540 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D J4G44_07210 efp; elongation factor P K02356 efp; elongation factor P D J4G44_10810 genX; EF-P lysine aminoacylase GenX K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D J4G44_07205 epmB; EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D J4G44_05465 elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D J4G44_01840 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D J4G44_00535 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:atg03110] D J4G44_09115 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D J4G44_07340 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D J4G44_00620 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D J4G44_03835 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D J4G44_02480 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D J4G44_08370 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA D J4G44_06110 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J4G44_02785 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D J4G44_08375 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB D J4G44_04185 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D J4G44_02475 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D J4G44_08290 RNA-binding protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D J4G44_06105 co-chaperone GroES K04078 groES; chaperonin GroES D J4G44_06915 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D J4G44_06030 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D J4G44_03210 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D J4G44_00095 molecular chaperone K07346 fimC; fimbrial chaperone protein D J4G44_04915 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D J4G44_02445 peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D J4G44_09405 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D J4G44_08415 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D J4G44_02265 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D J4G44_02270 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D J4G44_02405 peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D J4G44_10175 slyD; peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D J4G44_05245 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D J4G44_07965 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D J4G44_11290 thioredoxin family protein K03671 TXN; thioredoxin D J4G44_12395 trxA; thioredoxin K03671 TXN; thioredoxin D J4G44_04850 trxC; thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D J4G44_04920 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3 D J4G44_07165 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D J4G44_02305 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D J4G44_02075 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D J4G44_02550 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D J4G44_03565 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D J4G44_02015 dsbD; protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D J4G44_08655 dsbD; protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D J4G44_08665 dsbG; thiol:disulfide interchange protein DsbG K03805 dsbG; thiol:disulfide interchange protein DsbG C 04131 Membrane trafficking [BR:atg04131] D J4G44_00065 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D J4G44_01885 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D J4G44_07015 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D J4G44_07295 aldehyde dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D J4G44_03835 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:atg03051] D J4G44_03835 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:atg03032] D J4G44_00590 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J4G44_01155 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J4G44_13330 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J4G44_08410 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D J4G44_12410 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D J4G44_08100 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D J4G44_02600 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D J4G44_09790 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D J4G44_05815 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D J4G44_03095 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J4G44_09895 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J4G44_02605 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J4G44_03505 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D J4G44_00335 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J4G44_08025 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J4G44_10940 dnaQ; DNA polymerase III subunit epsilon K14159 rnhA-dnaQ; ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7] D J4G44_09525 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J4G44_07275 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D J4G44_12365 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J4G44_05400 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D J4G44_06705 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D J4G44_06580 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D J4G44_02615 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D J4G44_03410 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D J4G44_02060 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D J4G44_04610 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D J4G44_12855 hypothetical protein K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:atg03036] D J4G44_00590 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J4G44_01155 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J4G44_13330 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J4G44_06940 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D J4G44_03690 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D J4G44_08410 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D J4G44_12410 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D J4G44_08100 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D J4G44_04170 MerR family transcriptional regulator K18997 cbpM; chaperone modulatory protein CbpM D J4G44_02600 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D J4G44_09865 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D J4G44_07920 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D J4G44_07695 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D J4G44_05390 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D J4G44_05450 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D J4G44_05445 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D J4G44_01920 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D J4G44_09315 septum formation initiator family protein K05589 ftsB; cell division protein FtsB D J4G44_01505 ftsI; penicillin-binding protein PBP3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D J4G44_12055 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D J4G44_01510 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D J4G44_01925 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ D J4G44_03595 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D J4G44_01915 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D J4G44_05395 cell division protein ZipA K03528 zipA; cell division protein ZipA D J4G44_11015 cell division protein ZapA K09888 zapA; cell division protein ZapA D J4G44_08130 AFG1 family ATPase K06916 zapE; cell division protein ZapE D J4G44_05630 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J4G44_12035 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D J4G44_12040 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D J4G44_12045 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D J4G44_11785 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D J4G44_11780 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D J4G44_11775 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D J4G44_09305 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D J4G44_01220 ParA family protein K03496 parA; chromosome partitioning protein D J4G44_02960 ParA family protein K03496 parA; chromosome partitioning protein D J4G44_07990 ParA family protein K03496 parA; chromosome partitioning protein D J4G44_12525 AAA family ATPase K03496 parA; chromosome partitioning protein D J4G44_13295 AAA family ATPase K03496 parA; chromosome partitioning protein D J4G44_07995 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D J4G44_13240 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D J4G44_03410 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D J4G44_02060 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D J4G44_09835 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D J4G44_07985 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D J4G44_06560 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D J4G44_03570 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D J4G44_12790 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD D J4G44_11535 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D J4G44_10400 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D J4G44_01005 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:atg03400] D J4G44_12140 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D J4G44_10180 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D J4G44_08070 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D J4G44_02240 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D J4G44_11205 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D J4G44_01055 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D J4G44_10245 thiamine phosphate synthase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D J4G44_12010 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D J4G44_02255 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D J4G44_05250 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D J4G44_01985 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D J4G44_01855 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D J4G44_05400 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D J4G44_12365 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D J4G44_03075 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D J4G44_07000 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D J4G44_03905 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D J4G44_04620 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D J4G44_03785 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D J4G44_03790 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D J4G44_00845 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D J4G44_01360 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D J4G44_08350 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D J4G44_09950 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D J4G44_07910 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D J4G44_13140 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D J4G44_10570 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D J4G44_13145 exodeoxyribonuclease VII K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D J4G44_10375 DUF3820 family protein K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D J4G44_09895 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D J4G44_02605 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D J4G44_03505 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D J4G44_00335 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D J4G44_08025 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D J4G44_10940 dnaQ; DNA polymerase III subunit epsilon K14159 rnhA-dnaQ; ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7] D J4G44_09525 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D J4G44_03095 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J4G44_04140 UvrD-helicase domain-containing protein K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D J4G44_04135 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D J4G44_04145 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D J4G44_08285 recA; recombinase RecA K03553 recA; recombination protein RecA D J4G44_06790 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D J4G44_06785 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D J4G44_07770 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D J4G44_10585 RusA family crossover junction endodeoxyribonuclease K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D J4G44_04195 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D J4G44_11935 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50 D J4G44_11930 exonuclease SbcCD subunit D C-terminal domain-containing protein K03547 sbcD; DNA repair protein SbcD/Mre11 D J4G44_06530 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D J4G44_02610 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D J4G44_01045 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D J4G44_06955 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D J4G44_08470 recR; recombination protein RecR K06187 recR; recombination protein RecR D J4G44_03965 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D J4G44_00990 DUF853 family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D J4G44_06580 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D J4G44_02615 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D J4G44_04610 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D J4G44_08410 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D J4G44_09865 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D J4G44_12410 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D J4G44_08100 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D J4G44_03690 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D J4G44_03355 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D J4G44_08695 DUF4113 domain-containing protein K03502 umuC; DNA polymerase V D J4G44_13150 DUF4113 domain-containing protein K03502 umuC; DNA polymerase V D J4G44_08700 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D J4G44_13155 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D J4G44_08280 regulatory protein RecX K03565 recX; regulatory protein D J4G44_12015 UvrD-helicase domain-containing protein K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D J4G44_05515 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D J4G44_05510 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:atg03029] D J4G44_04045 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D J4G44_12460 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D J4G44_10720 elongation factor Ts K02357 tsf; elongation factor Ts D J4G44_03745 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D J4G44_12085 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D J4G44_12090 fusA; elongation factor G K02355 fusA; elongation factor G D J4G44_06945 era; GTPase Era K03595 era; GTPase D J4G44_02655 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D J4G44_00325 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D J4G44_00235 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D J4G44_03020 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D J4G44_11795 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D J4G44_11800 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D J4G44_11790 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D J4G44_01700 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial D J4G44_03095 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D J4G44_08245 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D J4G44_02480 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D J4G44_02475 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D J4G44_06110 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J4G44_06105 co-chaperone GroES K04078 groES; chaperonin GroES D J4G44_02785 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D J4G44_08390 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D J4G44_08375 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB D J4G44_07165 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D J4G44_11535 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D J4G44_09770 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D J4G44_02580 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J4G44_03835 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:atg02000] D J4G44_08010 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D J4G44_08725 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D J4G44_13270 msr(E); ABC-F type ribosomal protection protein Msr(E) K18231 msr; macrolide transport system ATP-binding/permease protein D J4G44_13460 ABC-F family ATP-binding cassette domain-containing protein K18231 msr; macrolide transport system ATP-binding/permease protein D J4G44_00350 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D J4G44_04590 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D J4G44_06880 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D J4G44_01520 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D J4G44_06870 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D J4G44_06865 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D J4G44_06860 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D J4G44_02355 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D J4G44_02360 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D J4G44_02370 ssuC; aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein D J4G44_02375 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D J4G44_11725 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D J4G44_11730 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D J4G44_11720 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D J4G44_01080 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D J4G44_01085 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D J4G44_01090 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D J4G44_01075 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D J4G44_01070 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D J4G44_07060 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D J4G44_07065 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D J4G44_07070 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D J4G44_07075 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D J4G44_09880 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D J4G44_09890 ABC transporter permease K02072 metI; D-methionine transport system permease protein D J4G44_09885 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D J4G44_10930 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D J4G44_10925 yejB; microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein D J4G44_10920 ABC transporter permease K13895 yejE; microcin C transport system permease protein D J4G44_10915 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D J4G44_03200 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D J4G44_03185 znuB; zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein D J4G44_03190 znuC; zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D J4G44_03515 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D J4G44_03520 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D J4G44_09985 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D J4G44_06655 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D J4G44_06660 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D J4G44_06590 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D J4G44_06595 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D J4G44_10685 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D J4G44_10680 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D J4G44_06240 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D J4G44_11855 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D J4G44_06235 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D J4G44_11860 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D J4G44_07185 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D J4G44_02050 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D J4G44_01170 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D J4G44_02105 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D J4G44_02190 mhpT; 3-(3-hydroxy-phenyl)propionate transporter MhpT K05819 mhpT; MFS transporter, AAHS family, 3-hydroxyphenylpropionic acid transporter D J4G44_02415 MFS transporter K05548 benK; MFS transporter, AAHS family, benzoate transport protein D J4G44_03330 MFS transporter K05548 benK; MFS transporter, AAHS family, benzoate transport protein D J4G44_08885 MFS transporter K05548 benK; MFS transporter, AAHS family, benzoate transport protein D J4G44_07870 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D J4G44_09020 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D J4G44_05555 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D J4G44_07175 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D J4G44_12930 floR; chloramphenicol/florfenicol efflux MFS transporter FloR K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein D J4G44_11360 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D J4G44_01240 MFS transporter K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D J4G44_13005 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D J4G44_03370 mdtD; multidrug transporter subunit MdtD K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein D J4G44_03335 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D J4G44_03405 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D J4G44_04480 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D J4G44_12500 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr D J4G44_01690 aqpZ; aquaporin Z K06188 aqpZ; aquaporin Z D J4G44_07860 ion transporter K10716 kch; voltage-gated potassium channel D J4G44_03465 ammonium transporter K03320 amt; ammonium transporter, Amt family D J4G44_02010 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J4G44_03010 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J4G44_07450 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J4G44_07685 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D J4G44_05065 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A D J4G44_05240 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D J4G44_01815 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel D J4G44_09000 mechanosensitive ion channel K16053 ybdG; miniconductance mechanosensitive channel D J4G44_06130 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D J4G44_10405 OmpA family protein K02557 motB; chemotaxis protein MotB D J4G44_04675 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D J4G44_08000 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D J4G44_04680 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D J4G44_08005 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D J4G44_06770 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D J4G44_06765 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D J4G44_01065 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D J4G44_01195 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D J4G44_04900 bestrophin family protein K08994 yneE; ion channel-forming bestrophin family protein D J4G44_09700 bestrophin family protein K08994 yneE; ion channel-forming bestrophin family protein D J4G44_11270 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D J4G44_05215 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D J4G44_07370 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D J4G44_10825 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D J4G44_06850 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein D J4G44_09945 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein D J4G44_11735 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein D J4G44_11740 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein D J4G44_00090 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D J4G44_00640 catecholate siderophore receptor Fiu K16090 fiu; catecholate siderophore receptor D J4G44_00140 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D J4G44_00635 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D J4G44_00225 znuD; zinc piracy TonB-dependent receptor ZnuD K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J4G44_03300 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D J4G44_13425 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D J4G44_03635 TolC family outer membrane protein K12340 tolC; outer membrane protein D J4G44_05620 adeK; multidrug efflux RND transporter AdeIJK outer membrane channel subunit AdeK K18139 oprM; outer membrane protein, multidrug efflux system D J4G44_02825 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein D J4G44_04395 OprD family outer membrane porin K21758 benP; benzoate transport porin D J4G44_08245 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D J4G44_00030 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D J4G44_05820 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D J4G44_11965 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE D J4G44_09635 outer membrane protein assembly factor K07278 tamA; translocation and assembly module TamA D J4G44_09630 translocation/assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB D J4G44_09990 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D J4G44_09995 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D J4G44_07970 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein D J4G44_00330 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D J4G44_04215 CBS domain-containing protein K06189 corC; hemolysin (HlyC) family protein D J4G44_05220 amino acid permease K11733 lysP; lysine-specific permease D J4G44_11715 amino acid permease K11734 aroP; aromatic amino acid transport protein AroP D J4G44_10885 amino acid permease K16235 mmuP; S-methylmethionine transporter D J4G44_12720 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D J4G44_13410 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D J4G44_12565 efflux RND transporter permease subunit K15726 czcA; heavy metal efflux system protein D J4G44_13415 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D J4G44_02775 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump D J4G44_05625 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D J4G44_06125 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D J4G44_13000 multidrug efflux RND transporter permease subunit K18146 adeB; multidrug efflux pump D J4G44_12145 sugE; quaternary ammonium compound efflux SMR transporter SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE D J4G44_01265 EamA family transporter K11939 rhtA; inner membrane transporter RhtA D J4G44_07010 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D J4G44_01165 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D J4G44_09110 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein D J4G44_03820 sodium:proton antiporter K07084 yuiF; putative amino acid transporter D J4G44_11150 lldP; L-lactate permease K00427 lldP; L-lactate permease D J4G44_05530 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter D J4G44_03050 cation acetate symporter K14393 actP; cation/acetate symporter D J4G44_08985 sstT; serine/threonine transporter SstT K07862 sstT; serine/threonine transporter D J4G44_11350 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D J4G44_04190 cation:proton antiporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D J4G44_04640 cation:proton antiporter K26735 KEA4_5_6; K+:H+ antiporter D J4G44_09155 potassium transporter TrkH K03498 trkH; trk/ktr system potassium uptake protein D J4G44_09150 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D J4G44_02750 pyrimidine utilization transport protein G K09016 rutG; putative pyrimidine permease RutG D J4G44_05230 uracil-xanthine permease K16345 xanP; xanthine permease XanP D J4G44_07255 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D J4G44_08930 benE; benzoate/H(+) symporter BenE K05782 benE; benzoate membrane transport protein D J4G44_09570 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein D J4G44_07445 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D J4G44_08980 sulP; sulfate permease K03321 TC.SULP; sulfate permease, SulP family D J4G44_12965 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D J4G44_08590 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter D J4G44_10315 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter D J4G44_04080 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A D J4G44_04075 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C D J4G44_04070 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D D J4G44_04065 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E D J4G44_04060 monovalent cation/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F D J4G44_04055 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G D J4G44_02275 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D J4G44_05260 AEC family transporter K13936 mdcF; malonate transporter and related proteins D J4G44_09300 AEC family transporter K13936 mdcF; malonate transporter and related proteins D J4G44_01710 potassium transporter Kup K03549 kup; KUP system potassium uptake protein D J4G44_03175 LysE family transporter K05834 rhtB; homoserine/homoserine lactone efflux protein D J4G44_07785 LysE family transporter K05835 rhtC; threonine efflux protein D J4G44_11555 LysE family translocator K05835 rhtC; threonine efflux protein D J4G44_09565 leuE; leucine efflux protein LeuE K11250 leuE; leucine efflux protein D J4G44_07670 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D J4G44_07665 ygaH; L-valine transporter subunit YgaH K26606 azlD; branched chain amino acid efflux pump D J4G44_11065 VIT family protein K22736 VIT; vacuolar iron transporter family protein D J4G44_03595 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D J4G44_01885 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D J4G44_04670 TonB family protein K03832 tonB; periplasmic protein TonB D J4G44_04725 TonB family protein K03832 tonB; periplasmic protein TonB D J4G44_06750 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D J4G44_04965 SPOR domain-containing protein K03646 tolA; colicin import membrane protein D J4G44_06760 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein D J4G44_06755 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D J4G44_12560 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D J4G44_13420 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D J4G44_02770 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D J4G44_05630 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J4G44_12995 efflux RND transporter periplasmic adaptor subunit K18145 adeA; membrane fusion protein, multidrug efflux system D J4G44_00345 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system D J4G44_02815 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D J4G44_06335 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter D J4G44_03575 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D J4G44_03580 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B D J4G44_11820 sbmA; peptide antibiotic transporter SbmA K17938 sbmA; peptide/bleomycin uptake transporter D J4G44_11445 entericidin A/B family lipoprotein K16348 ecnB; entericidin B C 02044 Secretion system [BR:atg02044] D J4G44_03635 TolC family outer membrane protein K12340 tolC; outer membrane protein D J4G44_03700 PDZ domain-containing protein K02452 gspC; general secretion pathway protein C D J4G44_03705 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D J4G44_10270 type II/IV secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D J4G44_12345 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D J4G44_04200 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D J4G44_04205 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D J4G44_08045 prepilin-type N-terminal cleavage/methylation domain-containing protein K02456 gspG; general secretion pathway protein G D J4G44_08050 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I D J4G44_08055 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J D J4G44_08060 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K D J4G44_07510 general secretion pathway protein GspL K02461 gspL; general secretion pathway protein L D J4G44_03695 gspN; type II secretion system protein N K02463 gspN; general secretion pathway protein N D J4G44_03990 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D J4G44_01405 pilin K02650 pilA; type IV pilus assembly protein PilA D J4G44_01410 pilin K02650 pilA; type IV pilus assembly protein PilA D J4G44_04000 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D J4G44_03995 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D J4G44_01315 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE D J4G44_01320 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE D J4G44_00055 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D J4G44_11480 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG D J4G44_11475 response regulator K02658 pilH; twitching motility two-component system response regulator PilH D J4G44_11470 purine-binding chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D J4G44_11465 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D J4G44_01475 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D J4G44_01470 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN D J4G44_01465 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D J4G44_01460 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D J4G44_01455 type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ D J4G44_11950 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D J4G44_11955 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D J4G44_01340 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D J4G44_01335 PilW family protein K02672 pilW; type IV pilus assembly protein PilW D J4G44_01325 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1 D J4G44_08030 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ D J4G44_01345 prepilin-type N-terminal cleavage/methylation domain-containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT D J4G44_05210 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT D J4G44_04565 hypothetical protein K08086 fimV; pilus assembly protein FimV D J4G44_12370 YggT family protein K02221 yggT; YggT family protein D J4G44_00010 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA D J4G44_06670 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D J4G44_02550 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D J4G44_03565 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D J4G44_03135 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D J4G44_10830 tagF; type VI secretion system-associated protein TagF K11890 impM; type VI secretion system protein ImpM D J4G44_00095 molecular chaperone K07346 fimC; fimbrial chaperone protein D J4G44_00090 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D J4G44_04975 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D J4G44_04915 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D J4G44_00415 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D J4G44_03755 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D J4G44_00420 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D J4G44_04010 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D J4G44_00870 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D J4G44_05365 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D J4G44_08540 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D J4G44_00410 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D J4G44_02580 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D J4G44_00685 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D J4G44_00690 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D J4G44_00695 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:atg02042] D J4G44_11270 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D J4G44_05150 hemolysin III family protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:atg02022] D J4G44_02125 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D J4G44_02120 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D J4G44_01585 HAMP domain-containing protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D J4G44_01580 ompR; two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D J4G44_05525 bfmS; sensor histidine kinase BfmS K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D J4G44_05520 bfmR; response regulator transcription factor BfmR K07661 rstA; two-component system, OmpR family, response regulator RstA D J4G44_00185 baeS; sensor histidine kinase efflux regulator BaeS K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D J4G44_00180 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D J4G44_08645 sensor histidine kinase N-terminal domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D J4G44_08650 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB D J4G44_13010 adeS; two-component sensor histidine kinase AdeS K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3] D J4G44_13015 adeR; efflux system response regulator transcription factor AdeR K18144 adeR; two-component system, OmpR family, response regulator AdeR D J4G44_11100 GHKL domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D J4G44_10255 two-component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D J4G44_10260 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D J4G44_00455 response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D J4G44_03545 response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D J4G44_03655 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D J4G44_03660 response regulator transcription factor K08083 algR; two-component system, LytTR family, response regulator AlgR D J4G44_08205 PAS domain-containing protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D J4G44_08200 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D J4G44_11880 sigma-54-dependent Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D J4G44_03540 histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D J4G44_03535 sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D J4G44_11480 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG D J4G44_11475 response regulator K02658 pilH; twitching motility two-component system response regulator PilH C 02035 Bacterial motility proteins [BR:atg02035] D J4G44_10405 OmpA family protein K02557 motB; chemotaxis protein MotB D J4G44_11480 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG D J4G44_11475 response regulator K02658 pilH; twitching motility two-component system response regulator PilH D J4G44_11470 purine-binding chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D J4G44_11465 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D J4G44_03535 sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D J4G44_03540 histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D J4G44_11950 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D J4G44_11955 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D J4G44_01405 pilin K02650 pilA; type IV pilus assembly protein PilA D J4G44_01410 pilin K02650 pilA; type IV pilus assembly protein PilA D J4G44_04000 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D J4G44_03995 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D J4G44_03990 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D J4G44_00055 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D J4G44_01455 type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ D J4G44_01460 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D J4G44_01465 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D J4G44_01470 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN D J4G44_01475 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D J4G44_08030 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ D J4G44_01340 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D J4G44_01335 PilW family protein K02672 pilW; type IV pilus assembly protein PilW D J4G44_01325 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1 D J4G44_01315 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE D J4G44_01320 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE D J4G44_00095 molecular chaperone K07346 fimC; fimbrial chaperone protein D J4G44_00090 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:atg04812] D J4G44_11785 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D J4G44_01915 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D J4G44_01920 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D J4G44_12035 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D J4G44_12040 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D J4G44_12045 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D J4G44_01220 ParA family protein K03496 parA; chromosome partitioning protein D J4G44_02960 ParA family protein K03496 parA; chromosome partitioning protein D J4G44_07990 ParA family protein K03496 parA; chromosome partitioning protein D J4G44_12525 AAA family ATPase K03496 parA; chromosome partitioning protein D J4G44_13295 AAA family ATPase K03496 parA; chromosome partitioning protein D J4G44_07995 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D J4G44_13240 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:atg04147] D J4G44_03835 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D J4G44_09320 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D J4G44_07015 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D J4G44_07295 aldehyde dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D J4G44_09445 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D J4G44_02445 peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D J4G44_06110 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D J4G44_02480 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D J4G44_02905 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D J4G44_01870 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D J4G44_03745 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D J4G44_12085 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D J4G44_08440 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D J4G44_07185 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D J4G44_03415 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J4G44_11895 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D J4G44_05175 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_05205 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_08955 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09545 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_09820 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D J4G44_10780 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D J4G44_11220 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D J4G44_06285 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D J4G44_03650 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D J4G44_10855 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D J4G44_06740 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D J4G44_11835 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D J4G44_06465 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D J4G44_11910 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D J4G44_01260 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D J4G44_09870 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D J4G44_04825 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_05920 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D J4G44_06575 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit D J4G44_04005 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D J4G44_07005 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:atg02048] D J4G44_13210 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D J4G44_13225 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D J4G44_13230 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D J4G44_03480 DNA adenine methylase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D J4G44_00590 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J4G44_01155 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J4G44_13330 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D J4G44_13335 AAA family ATPase K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] D J4G44_06180 restriction endonuclease K07448 mrr; restriction system protein D J4G44_01180 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D J4G44_09250 type II toxin-antitoxin system PemK/MazF family toxin K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-] D J4G44_09255 antitoxin K18842 chpS; antitoxin ChpS D J4G44_09075 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D J4G44_10995 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D J4G44_13530 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D J4G44_01185 type II toxin-antitoxin system RelB/DinJ family antitoxin K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D J4G44_07895 type II toxin-antitoxin system RelB/DinJ family antitoxin K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D J4G44_10990 type II toxin-antitoxin system RelB/DinJ family antitoxin K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D J4G44_13380 type II toxin-antitoxin system RelB/DinJ family antitoxin K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D J4G44_13535 type II toxin-antitoxin system RelB/DinJ family antitoxin K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D J4G44_01775 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D J4G44_02930 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D J4G44_12585 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D J4G44_13135 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D J4G44_01385 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D J4G44_01390 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4 D J4G44_11030 type II toxin-antitoxin system HigB family toxin K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D J4G44_12625 type II toxin-antitoxin system HigB family toxin K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D J4G44_06305 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D J4G44_11025 helix-turn-helix domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D J4G44_12620 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D J4G44_06300 HigA family addiction module antidote protein K21498 higA-1; antitoxin HigA-1 D J4G44_05295 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D J4G44_05290 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18829 mvpT; antitoxin VapB D J4G44_01915 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D J4G44_11785 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D J4G44_03410 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D J4G44_02060 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D J4G44_01530 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D J4G44_00825 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB D J4G44_08390 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:atg01504] D J4G44_13030 carbapenem-hydrolyzing class D beta-lactamase OXA-58 K18972 blaOXA-58; beta-lactamase class D OXA-58 [EC:3.5.2.6] D J4G44_12750 DUF4111 domain-containing protein K00984 aadA; streptomycin 3"-adenylyltransferase [EC:2.7.7.47] D J4G44_12780 APH(3')-I family aminoglycoside O-phosphotransferase K19272 aph3-I; aminoglycoside 3'-phosphotransferase I [EC:2.7.1.95] D J4G44_12795 tetracycline-inactivating monooxygenase Tet(X3) K18221 tetX; tetracycline 11a-monooxygenase, tetracycline resistance protein [EC:1.14.13.231] D J4G44_12835 erm; 23S ribosomal RNA methyltransferase Erm K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184] D J4G44_13270 msr(E); ABC-F type ribosomal protection protein Msr(E) K18231 msr; macrolide transport system ATP-binding/permease protein D J4G44_13460 ABC-F family ATP-binding cassette domain-containing protein K18231 msr; macrolide transport system ATP-binding/permease protein D J4G44_01240 MFS transporter K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D J4G44_12900 mph_3; Mph(E)/Mph(G) family macrolide 2'-phosphotransferase K06979 mph; macrolide phosphotransferase D J4G44_13265 Mph(E) family macrolide 2'-phosphotransferase K06979 mph; macrolide phosphotransferase D J4G44_12930 floR; chloramphenicol/florfenicol efflux MFS transporter FloR K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein D J4G44_05985 CatB-related O-acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28] D J4G44_12820 sul2; sulfonamide-resistant dihydropteroate synthase Sul2 K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15] D J4G44_12915 sul2; sulfonamide-resistant dihydropteroate synthase Sul2 K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15] D J4G44_13005 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D J4G44_05630 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D J4G44_05625 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D J4G44_06125 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D J4G44_05620 adeK; multidrug efflux RND transporter AdeIJK outer membrane channel subunit AdeK K18139 oprM; outer membrane protein, multidrug efflux system D J4G44_02765 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D J4G44_02770 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D J4G44_02775 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump D J4G44_11060 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D J4G44_13010 adeS; two-component sensor histidine kinase AdeS K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3] D J4G44_13015 adeR; efflux system response regulator transcription factor AdeR K18144 adeR; two-component system, OmpR family, response regulator AdeR D J4G44_12995 efflux RND transporter periplasmic adaptor subunit K18145 adeA; membrane fusion protein, multidrug efflux system D J4G44_13000 multidrug efflux RND transporter permease subunit K18146 adeB; multidrug efflux pump D J4G44_03635 TolC family outer membrane protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:atg00536] D J4G44_12670 hemagglutinin repeat-containing protein K15125 fhaB; filamentous hemagglutinin C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:atg03100] D J4G44_05040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J4G44_04810 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J4G44_02670 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J4G44_02430 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J4G44_12310 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J4G44_08570 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J4G44_03315 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J4G44_01535 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D J4G44_00760 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J4G44_00755 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J4G44_00765 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J4G44_05000 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J4G44_10675 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D J4G44_06970 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D J4G44_06490 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D J4G44_06500 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D J4G44_06505 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D J4G44_11415 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J4G44_11405 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J4G44_11395 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J4G44_11420 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D J4G44_06070 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D J4G44_05785 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J4G44_05790 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J4G44_05780 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J4G44_05775 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D J4G44_01540 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J4G44_10895 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J4G44_10890 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J4G44_10880 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J4G44_10900 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J4G44_10905 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D J4G44_01765 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J4G44_10010 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J4G44_03735 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J4G44_02945 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D J4G44_05005 tRNA-His K14226 tRNA-His; tRNA His D J4G44_02665 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J4G44_02435 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J4G44_05035 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J4G44_03310 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J4G44_12315 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J4G44_08565 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J4G44_04805 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D J4G44_00375 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J4G44_06050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J4G44_07605 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J4G44_04015 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J4G44_06065 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J4G44_07615 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D J4G44_04345 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J4G44_04355 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J4G44_04350 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D J4G44_04020 tRNA-Met K14230 tRNA-Met; tRNA Met D J4G44_07715 tRNA-Ile K14230 tRNA-Met; tRNA Met D J4G44_05860 tRNA-Met K14230 tRNA-Met; tRNA Met D J4G44_04030 tRNA-Met K14230 tRNA-Met; tRNA Met D J4G44_05870 tRNA-Met K14230 tRNA-Met; tRNA Met D J4G44_04025 tRNA-Met K14230 tRNA-Met; tRNA Met D J4G44_01610 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D J4G44_01605 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D J4G44_04995 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J4G44_05010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D J4G44_10845 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J4G44_00770 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J4G44_01715 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J4G44_06170 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D J4G44_03125 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J4G44_03725 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J4G44_03740 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D J4G44_07610 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D J4G44_03750 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D J4G44_03730 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D J4G44_11390 tRNA-Val K14237 tRNA-Val; tRNA Val D J4G44_11410 tRNA-Val K14237 tRNA-Val; tRNA Val D J4G44_11400 tRNA-Val K14237 tRNA-Val; tRNA Val D J4G44_11425 tRNA-Val K14237 tRNA-Val; tRNA Val D J4G44_07240 tRNA-Val K14237 tRNA-Val; tRNA Val D J4G44_02660 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J4G44_02440 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J4G44_03305 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J4G44_04800 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J4G44_12320 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J4G44_05030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J4G44_08560 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D J4G44_12305 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J4G44_08575 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J4G44_05045 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J4G44_03320 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J4G44_04815 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J4G44_02425 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J4G44_02675 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D J4G44_12300 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J4G44_08580 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J4G44_05050 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J4G44_04820 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J4G44_03325 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J4G44_02680 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J4G44_02420 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D J4G44_08275 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D J4G44_05855 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D J4G44_11840 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D J4G44_02410 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D J4G44_04655 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D J4G44_09350 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D J4G44_10850 FAD-dependent oxidoreductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D J4G44_04240 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D J4G44_11285 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D J4G44_02005 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D J4G44_10340 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D J4G44_00740 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D J4G44_07640 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D J4G44_12455 glutathione S-transferase N-terminal domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D J4G44_06820 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D J4G44_04970 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D J4G44_03100 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D J4G44_10030 ahpC; alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D J4G44_03170 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D J4G44_03000 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D J4G44_03105 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D J4G44_06405 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D J4G44_00645 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D J4G44_00995 hmpA; NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D J4G44_10285 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D J4G44_11610 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D J4G44_10325 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D J4G44_07720 tehB; SAM-dependent methyltransferase TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265] D J4G44_10020 beta-ketoacyl-ACP synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D J4G44_04210 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D J4G44_05130 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270] D J4G44_12065 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D J4G44_07235 DUF3488 domain-containing transglutaminase family protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D J4G44_12070 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D J4G44_00710 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D J4G44_09735 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D J4G44_04125 phosphate--AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33] D J4G44_00110 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D J4G44_06435 diguanylate cyclase K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65] D J4G44_00160 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D J4G44_03685 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D J4G44_06775 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D J4G44_06920 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D J4G44_09520 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D J4G44_04895 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D J4G44_07505 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D J4G44_00520 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D J4G44_08035 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D J4G44_08625 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-] D J4G44_03290 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D J4G44_12340 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D J4G44_10125 CYTH domain-containing protein K18446 ygiF; triphosphatase [EC:3.6.1.25] D J4G44_09455 maf; septum formation protein Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D J4G44_07225 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D J4G44_06875 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D J4G44_07765 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D J4G44_11300 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D J4G44_02515 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D J4G44_11200 RnfABCDGE type electron transport complex subunit B K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D J4G44_09955 ferredoxin family protein K05524 fdxA; ferredoxin D J4G44_08385 iscU; Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D J4G44_06570 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit D J4G44_03860 dodecin domain-containing protein K09165 K09165; dodecin C 99983 Lipid metabolism D J4G44_04465 acyl-CoA dehydrogenase family protein K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D J4G44_11945 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D J4G44_08105 DUF1049 domain-containing protein K08992 lapA; lipopolysaccharide assembly protein A C 99987 Cofactor metabolism D J4G44_04105 2-octaprenylphenol hydroxylase K03688 ubiB; ubiquinone biosynthesis protein C 99988 Secondary metabolism C 99999 Others D J4G44_02980 DoxX family protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D J4G44_02210 cold-shock protein K03704 cspA; cold shock protein D J4G44_07480 cold-shock protein K03704 cspA; cold shock protein D J4G44_11625 cold shock domain-containing protein K03704 cspA; cold shock protein D J4G44_03460 glnK; P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2 D J4G44_01575 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D J4G44_00735 META domain-containing protein K03668 hslJ; heat shock protein HslJ D J4G44_09120 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D J4G44_00630 trigger factor K03545 tig; trigger factor D J4G44_05840 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D J4G44_03450 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein D J4G44_04780 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein D J4G44_03005 OsmC family protein K07397 yhfA; putative redox protein D J4G44_07335 OsmC family protein K07397 yhfA; putative redox protein D J4G44_06210 nfuA; Fe-S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA C 99976 Replication and repair D J4G44_05975 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D J4G44_04905 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D J4G44_10965 YraN family protein K07460 yraN; putative endonuclease D J4G44_03280 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein D J4G44_02215 replication-associated recombination protein A K07478 ycaJ; putative ATPase D J4G44_00440 3'-5' exonuclease K07501 K07501; 3'-5' exonuclease D J4G44_13305 IS1 family transposase K07480 insB; insertion element IS1 protein InsB D J4G44_13315 IS1 family transposase K07480 insB; insertion element IS1 protein InsB D J4G44_12770 IS6-like element IS26 family transposase K18320 IS15; transposase, IS6 family D J4G44_12785 IS6-like element IS26 family transposase K18320 IS15; transposase, IS6 family D J4G44_13465 IS6-like element IS1008 family transposase K18320 IS15; transposase, IS6 family D J4G44_02685 IS30 family transposase K07482 K07482; transposase, IS30 family D J4G44_02995 IS30 family transposase K07482 K07482; transposase, IS30 family D J4G44_03145 IS30-like element ISAba125 family transposase K07482 K07482; transposase, IS30 family D J4G44_05575 IS30-like element ISAba125 family transposase K07482 K07482; transposase, IS30 family D J4G44_11340 IS30-like element ISAba125 family transposase K07482 K07482; transposase, IS30 family D J4G44_13085 IS30 family transposase K07482 K07482; transposase, IS30 family D J4G44_11090 transposase K07483 K07483; transposase D J4G44_12660 transposase K07483 K07483; transposase D J4G44_11080 IS66 family transposase K07484 K07484; transposase D J4G44_11085 tnpB; IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase D J4G44_05270 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D J4G44_00450 transposase K07496 K07496; putative transposase D J4G44_02455 transposase K07496 K07496; putative transposase D J4G44_02635 transposase K07496 K07496; putative transposase D J4G44_03270 transposase K07496 K07496; putative transposase D J4G44_04510 transposase K07496 K07496; putative transposase D J4G44_05265 transposase K07496 K07496; putative transposase D J4G44_07930 IS3-like element ISAba20 family transposase K07497 K07497; putative transposase D J4G44_09040 IS3-like element ISAba20 family transposase K07497 K07497; putative transposase D J4G44_10450 IS3-like element ISAba20 family transposase K07497 K07497; putative transposase D J4G44_12680 IS3 family transposase K07497 K07497; putative transposase D J4G44_12760 IS3 family transposase K07497 K07497; putative transposase D J4G44_12880 DDE-type integrase/transposase/recombinase K07497 K07497; putative transposase D J4G44_13190 IS3 family transposase K07497 K07497; putative transposase D J4G44_13245 IS3-like element ISAba20 family transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D J4G44_08465 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D J4G44_11495 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D J4G44_06190 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D J4G44_02700 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D J4G44_06535 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D J4G44_08175 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D J4G44_09845 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family D J4G44_09850 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family D J4G44_00210 RcnB family protein K23243 rcnB; nickel/cobalt homeostasis protein C 99978 Cell growth D J4G44_04890 septation protein IspZ K06190 ispZ; intracellular septation protein C 99993 Cell motility D J4G44_03955 lpoB; penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator C 99995 Signaling proteins D J4G44_07215 carbon starvation protein A K06200 cstA; carbon starvation protein D J4G44_05235 typA; translational GTPase TypA K06207 typA; GTP-binding protein D J4G44_04330 HPP family protein K07168 K07168; CBS domain-containing membrane protein D J4G44_04735 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D J4G44_04865 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D J4G44_05660 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein D J4G44_05800 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D J4G44_12325 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D J4G44_08250 OmpH family outer membrane protein K06142 hlpA; outer membrane protein D J4G44_07150 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD D J4G44_03365 glycoside hydrolase family 25 protein K07273 acm; lysozyme D J4G44_03825 outer membrane beta-barrel protein K07275 ompW; outer membrane protein D J4G44_05540 NfeD family protein K07340 ybbJ; inner membrane protein D J4G44_06600 biotin/lipoyl-binding protein K01993 ABC-2.TX; HlyD family secretion protein D J4G44_11070 AI-2E family transporter K11744 tqsA; AI-2 transport protein TqsA C 99994 Others D J4G44_03640 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D J4G44_01375 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin D J4G44_00340 bacteriohemerythrin K07216 hr; hemerythrin D J4G44_11980 bacteriohemerythrin K07216 hr; hemerythrin D J4G44_06400 NAD(P)/FAD-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport D J4G44_12155 copper resistance protein B K07233 pcoB; copper resistance protein B D J4G44_13445 copper resistance protein B K07233 pcoB; copper resistance protein B B B 09194 Poorly characterized C 99996 General function prediction only D J4G44_07525 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D J4G44_05545 patatin-like phospholipase family protein K07001 K07001; NTE family protein D J4G44_11330 patatin-like phospholipase family protein K07001 K07001; NTE family protein D J4G44_02645 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D J4G44_04690 YihY family inner membrane protein K07058 K07058; membrane protein D J4G44_07780 FxsA family protein K07113 fxsA; UPF0716 protein FxsA D J4G44_05745 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D J4G44_07105 hflD; high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein D J4G44_10310 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH D J4G44_00390 LemA family protein K03744 lemA; LemA protein D J4G44_01425 LemA family protein K03744 lemA; LemA protein D J4G44_04595 SlyX family protein K03745 slyX; SlyX protein D J4G44_02975 DedA family protein K03975 dedA; membrane-associated protein D J4G44_03490 VTT domain-containing protein K03975 dedA; membrane-associated protein D J4G44_07095 DUF2238 domain-containing protein K08984 yjdF; putative membrane protein D J4G44_03395 YchJ family protein K09858 K09858; SEC-C motif domain protein D J4G44_00205 phosphate-starvation-inducible PsiE family protein K13256 psiE; protein PsiE D J4G44_05340 alkylphosphonate utilization protein K06193 phnA; protein PhnA C 99997 Function unknown D J4G44_01420 TPM domain-containing protein K06872 K06872; uncharacterized protein D J4G44_04845 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein D J4G44_07590 ATP-binding protein K06923 K06923; uncharacterized protein D J4G44_05750 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein D J4G44_01875 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D J4G44_03110 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein D J4G44_02525 N-acetyltransferase K06975 K06975; uncharacterized protein D J4G44_12250 peptidase K06992 K06992; uncharacterized protein D J4G44_02065 esterase K07000 K07000; uncharacterized protein D J4G44_05505 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein D J4G44_09340 alpha/beta fold hydrolase K07019 K07019; uncharacterized protein D J4G44_01010 VOC family protein K07032 K07032; uncharacterized protein D J4G44_05720 YecA family protein K07039 K07039; uncharacterized protein D J4G44_04940 metal-dependent hydrolase K07044 K07044; uncharacterized protein D J4G44_12080 metal-dependent hydrolase K07044 K07044; uncharacterized protein D J4G44_05970 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein D J4G44_00790 YheV family putative metal-binding protein K07070 K07070; uncharacterized protein D J4G44_11920 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein D J4G44_08545 nitroreductase family protein K07078 K07078; uncharacterized protein D J4G44_08550 nitroreductase family protein K07078 K07078; uncharacterized protein D J4G44_02045 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D J4G44_05380 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D J4G44_09275 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D J4G44_11870 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D J4G44_00700 PhoX family phosphatase K07093 K07093; uncharacterized protein D J4G44_05140 metallophosphoesterase K07098 K07098; uncharacterized protein D J4G44_04760 YeeE/YedE family protein K07112 K07112; uncharacterized protein D J4G44_08610 YeeE/YedE family protein K07112 K07112; uncharacterized protein D J4G44_08615 YeeE/YedE family protein K07112 K07112; uncharacterized protein D J4G44_05275 sel1 repeat family protein K07126 K07126; uncharacterized protein D J4G44_10770 sel1 repeat family protein K07126 K07126; uncharacterized protein D J4G44_12600 ATP-binding protein K07133 K07133; uncharacterized protein D J4G44_12650 ATP-binding protein K07133 K07133; uncharacterized protein D J4G44_02585 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D J4G44_07565 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D J4G44_05705 DUF493 domain-containing protein K09158 K09158; uncharacterized protein D J4G44_02220 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D J4G44_06640 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D J4G44_04885 hypothetical protein K09780 K09780; uncharacterized protein D J4G44_05965 DUF808 domain-containing protein K09781 K09781; uncharacterized protein D J4G44_11435 YbaN family protein K09790 K09790; uncharacterized protein D J4G44_04165 DUF465 domain-containing protein K09794 K09794; uncharacterized protein D J4G44_05315 SIMPL domain-containing protein K09797 K09797; uncharacterized protein D J4G44_03085 DUF475 domain-containing protein K09799 K09799; uncharacterized protein D J4G44_11970 RnfH family protein K09801 K09801; uncharacterized protein D J4G44_13365 BrnT family toxin K09803 K09803; uncharacterized protein D J4G44_03945 hypothetical protein K09859 K09859; uncharacterized protein D J4G44_10185 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein D J4G44_04270 DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D J4G44_11005 UPF0149 family protein K09895 K09895; uncharacterized protein D J4G44_08480 YcgL domain-containing protein K09902 K09902; uncharacterized protein D J4G44_08555 DUF2057 domain-containing protein K09909 K09909; uncharacterized protein D J4G44_08995 DUF2058 domain-containing protein K09912 K09912; uncharacterized protein D J4G44_10225 YeaC family protein K09916 K09916; uncharacterized protein D J4G44_02510 DMT family protein K09922 K09922; uncharacterized protein D J4G44_05345 YegP family protein K09946 K09946; uncharacterized protein D J4G44_12175 DUF2218 domain-containing protein K09956 K09956; uncharacterized protein D J4G44_09450 DUF2237 domain-containing protein K09966 K09966; uncharacterized protein D J4G44_11440 DUF1853 family protein K09977 K09977; uncharacterized protein D J4G44_04245 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein D J4G44_08495 VWA domain-containing protein K09989 K09989; uncharacterized protein D J4G44_00280 mitochondrial fission ELM1 family protein K07276 K07276; uncharacterized protein D J4G44_00295 mitochondrial fission ELM1 family protein K07276 K07276; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 10, 2024