+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Bombus bifarius (two-form bumblebee)

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AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors E 117206244 mRNA cap guanine-N7 methyltransferase K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] E 117207087 mRNA-capping enzyme K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74] E 117213775 cyclin-dependent kinase 7 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E 117215200 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57] E 117206100 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296] E 117205252 uncharacterized protein LOC117205252 K18708 FAM103A1; RNMT-activating mini protein D Cap binding complex E 117214039 nuclear cap-binding protein subunit 1 K12882 NCBP1; nuclear cap-binding protein subunit 1 E 117204119 nuclear cap-binding protein subunit 2 isoform X1 K12883 NCBP2; nuclear cap-binding protein subunit 2 C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) E 117211746 cleavage and polyadenylation specificity factor subunit 5 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 E 117213727 cleavage and polyadenylation specificity factor subunit CG7185-like isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 D Pre-mRNA cleavage factor IIm (CFIIm) E 117217093 protein CLP1 homolog K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] E 117206505 uncharacterized protein LOC117206505 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 D Cleavage and polyadenylation specificity factor (CPSF) complex E 117210402 cleavage and polyadenylation specificity factor subunit 1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 E 117208643 probable cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E 117206335 cleavage and polyadenylation specificity factor 73 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E 117205297 cleavage and polyadenylation specificity factor subunit 4 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 E 117214470 pre-mRNA 3'-end-processing factor FIP1 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 E 117210485 uncharacterized protein LOC117210485 K15542 PFS2; polyadenylation factor subunit 2 E 117204769 WD repeat-containing protein 82 K14962 WDR82; COMPASS component SWD2 E 117207895 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E 117212235 serine/threonine-protein phosphatase alpha-2 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E 117210495 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] D Cleavage stimulation factor (CSTF) complex E 117211183 cleavage stimulation factor subunit 1 K14406 CSTF1; cleavage stimulation factor subunit 1 E 117204813 cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2 E 117210191 protein suppressor of forked K14408 CSTF3; cleavage stimulation factor subunit 3 E 117211344 symplekin K06100 SYMPK; symplekin D U7-dependent histone pre-mRNA processing factors E 117204117 small nuclear ribonucleoprotein-associated protein B isoform X1 K11086 SNRPB; small nuclear ribonucleoprotein B and B' E 117214513 small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3 E 117205243 small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F E 117209892 probable small nuclear ribonucleoprotein G isoform X1 K11099 SNRPG; small nuclear ribonucleoprotein G E 117206007 U7 snRNA-associated Sm-like protein LSm11 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11 E 117208643 probable cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E 117206335 cleavage and polyadenylation specificity factor 73 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E 117204813 cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2 E 117211344 symplekin K06100 SYMPK; symplekin E 117205535 histone RNA hairpin-binding protein K18710 SLBP; histone RNA hairpin-binding protein D DRB sensitivity inducing factor (DSIF) complex E 117207005 transcription elongation factor SPT4-A K15171 SUPT4H1; transcription elongation factor SPT4 E 117216243 transcription elongation factor SPT5 K15172 SUPT5H; transcription elongation factor SPT5 D N6-methyltransferase complex E 117209288 N6-adenosine-methyltransferase catalytic subunit K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] E 117210696 N6-adenosine-methyltransferase non-catalytic subunit K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit E 117209567 N(6)-adenine-specific DNA methyltransferase METTL4 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72] E 117209209 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] E 117212994 pre-mRNA-splicing regulator WTAP isoform X1 K22824 WTAP; pre-mRNA-splicing regulator WTAP E 117205155 protein virilizer K22910 VIRMA; protein virilizer E 117211989 RNA-binding protein spenito K13190 RBM15; RNA-binding protein 15 E 117213742 protein split ends-like isoform X1 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 E 117207477 zinc finger CCCH domain-containing protein 13-like K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 E 117211053 E3 ubiquitin-protein ligase Hakai K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27] D Poly(A) addition factors E 117209668 poly(A) polymerase type 3 K14376 PAP; poly(A) polymerase [EC:2.7.7.19] E 117213915 poly(A) RNA polymerase gld-2 homolog A-like isoform X1 K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19] E 117210436 speckle targeted PIP5K1A-regulated poly(A) polymerase-like K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52] D Negative regulators of mRNA 3' end processing E 117214016 BRCA1-associated RING domain protein 1-like isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1 E 117210203 RNA-binding protein 26 isoform X1 K13192 RBM26; RNA-binding protein 26 E 117214154 TAR DNA-binding protein 43 isoform X1 K23600 TARDBP; TAR DNA-binding protein 43 C Other processing factors D 117207179 DNA/RNA-binding protein KIN17 K13102 KIN; DNA/RNA-binding protein KIN17 D 117211434 methyltransferase-like protein 22 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] D 117214784 terminal nucleotidyltransferase 5C isoform X1 K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19] D 117207172 zinc finger CCCH domain-containing protein 14 isoform X1 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14 D 117211332 serrate RNA effector molecule homolog isoform X1 K27103 SRRT; serrate RNA effector molecule B mRNA surveillance and transport factors C Transport factors D EJC complex E 117208537 RNA-binding protein 8A K12876 RBM8A; RNA-binding protein 8A E 117207004 protein mago nashi homolog K12877 MAGOH; protein mago nashi E 117211291 THO complex subunit 4 K12881 THOC4; THO complex subunit 4 E 117204768 ATP-dependent RNA helicase WM6 isoform X1 K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] E 117213134 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E 117216664 coiled-coil domain-containing protein 174 K25178 CCDC174; coiled-coil domain-containing protein 174 E 117212301 protein CASC3 isoform X1 K14323 CASC3; protein CASC3 E 117208531 histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18 E 117214453 pinin K13114 PNN; pinin E 117204231 apoptotic chromatin condensation inducer in the nucleus isoform X1 K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus E 117207058 RNA-binding protein with serine-rich domain 1-A-like K14325 RNPS1; RNA-binding protein with serine-rich domain 1 E 117214183 serine/arginine repetitive matrix protein 1-like isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1 D TREX complex E 117211807 THO complex subunit 1 isoform X1 K12878 THOC1; THO complex subunit 1 E 117214179 THO complex subunit 2 isoform X1 K12879 THOC2; THO complex subunit 2 E 117213803 THO complex subunit 3 K12880 THOC3; THO complex subunit 3 E 117211291 THO complex subunit 4 K12881 THOC4; THO complex subunit 4 E 117212877 THO complex subunit 5 homolog K13174 THOC5; THO complex subunit 5 E 117206167 THO complex subunit 6 homolog K13175 THOC6; THO complex subunit 6 E 117216229 THO complex subunit 7 homolog isoform X1 K13176 THOC7; THO complex subunit 7 D TREX-2 complex E 117204316 PCI domain-containing protein 2 isoform X1 K23801 PCID2; nuclear mRNA export protein PCID2/THP1 E 117206934 26S proteasome complex subunit SEM1 K10881 SHFM1; 26 proteasome complex subunit DSS1 E 117205065 transcription and mRNA export factor ENY2 K11368 ENY2; enhancer of yellow 2 transcription factor E 117204646 cell division control protein 31-like K16466 CETN3; centrin-3 D Nuclear pore complex E 117205152 nucleoprotein TPR K09291 TPR; nucleoprotein TPR E 117216763 mRNA export factor K14298 RAE1; mRNA export factor E 117205331 protein SEC13 homolog K14004 SEC13; protein transport protein SEC13 E 117208816 nucleoporin Nup37 K14302 NUP37; nuclear pore complex protein Nup37 E 117206905 nuclear pore complex protein Nup85 K14304 NUP85; nuclear pore complex protein Nup85 E 117206704 nuclear pore complex protein Nup50 isoform X1 K14295 NUP50; nuclear pore complex protein Nup50 E 117206060 nuclear pore complex protein Nup54-like isoform X1 K14308 NUP54; nuclear pore complex protein Nup54 E 117208938 nuclear pore glycoprotein p62 K14306 NUP62; nuclear pore complex protein Nup62 E 117204823 nuclear pore complex protein Nup88 isoform X1 K14318 NUP88; nuclear pore complex protein Nup88 E 117214004 nuclear pore complex protein Nup93-like K14309 NUP93; nuclear pore complex protein Nup93 E 117206394 putative GPI-anchored protein pfl2 isoform X1 K14297 NUP98; nuclear pore complex protein Nup98-Nup96 E 117213981 nuclear pore complex protein Nup98-Nup96 isoform X1 K14297 NUP98; nuclear pore complex protein Nup98-Nup96 E 117210905 nuclear pore complex protein Nup107 isoform X1 K14301 NUP107; nuclear pore complex protein Nup107 E 117211720 nuclear pore complex protein Nup133 K14300 NUP133; nuclear pore complex protein Nup133 E 117211493 nucleoporin NUP188 homolog K14311 NUP188; nuclear pore complex protein Nup188 E 117215704 nuclear pore complex protein Nup153-like isoform X1 K14296 NUP153; nuclear pore complex protein Nup153 E 117209009 nuclear pore complex protein Nup154 K14312 NUP155; nuclear pore complex protein Nup155 E 117216963 nuclear pore complex protein Nup160 homolog isoform X1 K14303 NUP160; nuclear pore complex protein Nup160 E 117214335 uncharacterized protein LOC117214335 K14313 NUP35; nuclear pore complex protein Nup53 E 117213349 nuclear pore complex protein Nup205 isoform X1 K14310 NUP205; nuclear pore complex protein Nup205 E 117214233 nuclear pore membrane glycoprotein 210 isoform X1 K14314 NUP210; nuclear pore complex protein Nup210 E 117205922 nuclear pore complex protein Nup214 K14317 NUP214; nuclear pore complex protein Nup214 E 117217026 nucleoporin p58/p45-like isoform X1 K14307 NUPL1; nucleoporin p58/p45 E 117204068 nucleoporin NDC1 K14315 NDC1; nucleoporin NDC1 E 117212819 nucleoporin SEH1 isoform X1 K14299 SEH1; nucleoporin SEH1 E 117209553 E3 SUMO-protein ligase RanBP2-like isoform X1 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-] E 117210500 aladin-like isoform X1 K14320 AAAS; aladin E 117211385 nuclear pore complex protein DDB_G0274915-like isoform X1 K18716 NUP42; nucleoporin NUP42 E 117204646 cell division control protein 31-like K16466 CETN3; centrin-3 E 117207754 nucleoporin Gle1-like isoform X1 K18723 GLE1; nucleoporin GLE1 E 117209332 nucleoporin GLE1-like isoform X1 K18723 GLE1; nucleoporin GLE1 E 117208285 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor E 117217032 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor E 117211596 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor E 117215785 NTF2-related export protein K14285 NXT1_2; NTF2-related export protein 1/2 D Ran-mediated transport factors E 117214030 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran E 117214970 acidic leucine-rich nuclear phosphoprotein 32 family member A isoform X1 K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D E 117209278 ELAV-like protein 3 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4 E 117207094 FAS-associated factor 2 K18726 FAF2; FAS-associated factor 2 E 117212694 transitional endoplasmic reticulum ATPase TER94 K13525 VCP; transitional endoplasmic reticulum ATPase E 117210808 exportin-1 K14290 XPO1; exportin-1 E 117209350 exportin-7 isoform X1 K18460 XPO7; exportin-7 E 117211749 ran GTPase-activating protein 1-like K14319 RANGAP1; Ran GTPase-activating protein 1 D eIF4F and regulatory proteins E 117210764 eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E E 117205211 eukaryotic translation initiation factor 4E-1A-like isoform X1 K03259 EIF4E; translation initiation factor 4E E 117216847 eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A E 117213706 eukaryotic translation initiation factor 4 gamma 2 isoform X1 K03260 EIF4G; translation initiation factor 4G E 117216190 eukaryotic translation initiation factor 4 gamma 3-like isoform X1 K03260 EIF4G; translation initiation factor 4G E 117204165 eukaryotic translation initiation factor 4B K03258 EIF4B; translation initiation factor 4B E 117207444 eukaryotic translation initiation factor 4H-like isoform X1 K24086 EIF4H; translation initiation factor 4H E 117217031 eukaryotic translation initiation factor 4E-binding protein 2 K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2 E 117216622 putative uncharacterized protein DDB_G0271606 isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter E 117213217 protein angel K18729 ANGEL; protein angel E 117208840 synaptic functional regulator FMR1 isoform X1 K15516 FMR; fragile X mental retardation protein E 117213555 cytoplasmic FMR1-interacting protein K05749 CYFIP; cytoplasmic FMR1 interacting protein E 117208811 gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5 E 117210542 cytoplasmic polyadenylation element-binding protein 2-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 117212161 cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 117209445 putative ATP-dependent RNA helicase Pl10 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E 117216998 GRB10-interacting GYF protein 2-like isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E 117209543 polyadenylate-binding protein 1 K13126 PABPC; polyadenylate-binding protein E 117214356 uncharacterized protein LOC117214356 K14322 PAIP1; polyadenylate-binding protein-interacting protein 1 E 117210559 polyadenylate-binding protein-interacting protein 2 K27470 PAIP2; polyadenylate-binding protein-interacting protein 2 E 117205329 helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] E 117209716 deformed epidermal autoregulatory factor 1 K23041 DEAF1; deformed epidermal autoregulatory factor 1 E 117210360 malignant T-cell-amplified sequence 1 homolog K07575 MCTS; malignant T-cell-amplified sequence E 117209211 density-regulated protein homolog K24272 DENR; density-regulated protein D APOBEC1-ACF complex D Other transport factors E 117216501 partner of Y14 and mago K14294 WIBG; partner of Y14 and mago E 117204828 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 117215078 RNA-binding protein Musashi homolog Rbp6 isoform X1 K14411 MSI; RNA-binding protein Musashi E 117215819 RNA-binding protein Musashi homolog 2 isoform X1 K14411 MSI; RNA-binding protein Musashi E 117216492 heterogeneous nuclear ribonucleoprotein 27C-like isoform X1 K14411 MSI; RNA-binding protein Musashi E 117210348 HBS1-like protein isoform X1 K14416 HBS1; elongation factor 1 alpha-like protein E 117206050 LOW QUALITY PROTEIN: protein pelota K06965 PELO; protein pelota E 117206372 DEAD-box helicase Dbp80 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] E 117206985 pre-mRNA-splicing factor syf1 homolog K12867 SYF1; pre-mRNA-splicing factor SYF1 E 117211198 SAP domain-containing ribonucleoprotein isoform X1 K18732 SARNP; SAP domain-containing ribonucleoprotein E 117211523 regulator of chromosome condensation isoform X1 K11493 RCC1; regulator of chromosome condensation E 117204379 la-related protein 6 K18733 LARP6; la-related protein 6 E 117210502 transcriptional activator protein Pur-beta isoform X1 K21772 PURA; transcriptional activator protein Pur-alpha E 117210670 uncharacterized protein LOC117210670 isoform X1 K22414 POLDIP3; polymerase delta-interacting protein 3 E 117211826 zinc finger CCCH domain-containing protein 11A-like isoform X1 K22415 ZC3H11; zinc finger CCCH domain-containing protein 11 E 117207839 leukocyte receptor cluster member 8 homolog isoform X1 K23802 LENG8; SAC3 family protein LENG8/THP3 C Surveillance factors D Surveillance complex E 117210241 eukaryotic peptide chain release factor subunit 1 isoform X1 K03265 ETF1; peptide chain release factor subunit 1 E 117213952 eukaryotic peptide chain release factor GTP-binding subunit ERF3A K03267 ERF3; peptide chain release factor subunit 3 E 117213905 regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E 117210368 regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2 E 117209518 regulator of nonsense transcripts 3A-like K14328 UPF3; regulator of nonsense transcripts 3 D Protein phosphatase 2A E 117204085 serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] E 117211465 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X1 K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A E 117209847 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B E 117214301 uncharacterized protein LOC117214301 isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E 117207593 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' E 117215764 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' D Other surveillance factors E 117204161 serine/threonine-protein kinase SMG1 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] E 117213733 protein SMG5 K11125 SMG5; protein SMG5 E 117207319 telomerase-binding protein EST1A-like isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-] E 117208088 protein SMG7-like K14409 SMG7; protein SMG7 E 117214366 protein SMG8 K18734 SMG8; protein SMG8 E 117216900 protein SMG9 isoform X1 K18735 SMG9; protein SMG9 E 117216998 GRB10-interacting GYF protein 2-like isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E 117205602 selenocysteine insertion sequence-binding protein 2-like K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2 E 117214676 probable ATP-dependent RNA helicase DHX34 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6] E 117206094 GTP-binding protein 1 K24887 GTPBP1; GTP-binding protein 1 C Factors involved in mRNA localization D Cargo complex E 117210737 protein penguin K14844 PUF6; pumilio homology domain family member 6 E 117216581 unconventional myosin-Va isoform X1 K10357 MYO5; myosin V E 117207905 protein bicaudal D isoform X1 K18739 BICD; protein bicaudal D E 117204890 egalitarian protein homolog K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 D Factors that have mRNA localization signals E 117210151 actin-5C K05692 ACTB_G1; actin beta/gamma 1 E 117210453 T-box protein 2-like K10180 TBX6; T-box protein 6 E 117216684 uncharacterized protein LOC117216684 K18741 NANOS1; protein nanos 1 E 117213265 enhancer of split m7 protein-like K09090 HESN; hairy and enhancer of split, invertebrate E 117213340 enhancer of split mbeta protein-like K09090 HESN; hairy and enhancer of split, invertebrate E 117206817 enhancer of split mgamma protein-like K09090 HESN; hairy and enhancer of split, invertebrate E 117215640 protein hairy K09090 HESN; hairy and enhancer of split, invertebrate E 117215645 protein hairy-like K09090 HESN; hairy and enhancer of split, invertebrate D Trans-acting binding proteins E 117205478 far upstream element-binding protein 3 K13210 FUBP; far upstream element-binding protein E 117206355 elongation factor 1-alpha isoform X1 K03231 EEF1A; elongation factor 1-alpha E 117211795 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha E 117211098 elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma E 117211396 uncharacterized protein LOC117211396 isoform X1 K16220 HAX1; HCLS1-associated protein X-1 E 117207827 arf-GAP domain and FG repeat-containing protein 1 isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1 E 117205191 double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen E 117214153 polypyrimidine tract-binding protein 1 isoform X1 K13218 PTBP1; polypyrimidine tract-binding protein 1 E 117214936 RNA-binding protein squid isoform X1 K03102 SQD; squid E 117208336 RNA-binding protein squid-like K03102 SQD; squid E 117210542 cytoplasmic polyadenylation element-binding protein 2-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 117212161 cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein D Other mRNA localization factors E 117208840 synaptic functional regulator FMR1 isoform X1 K15516 FMR; fragile X mental retardation protein E 117213555 cytoplasmic FMR1-interacting protein K05749 CYFIP; cytoplasmic FMR1 interacting protein E 117205792 poly(rC)-binding protein 4 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4 E 117212241 caprin homolog K18743 CAPRIN1; caprin-1 E 117207819 CUGBP Elav-like family member 2 isoform X1 K02177 BRU; bruno E 117207519 maternal protein exuperantia K18745 EXU; maternal protein exuperantia E 117206412 Y-box-binding protein 1 isoform X1 K09276 YBX1; Y-box-binding protein 1 E 117214360 sex-lethal homolog isoform X1 K18747 SXL; protein sex-lethal C mRNA cycle factors D Common to processing body (P body) and stress granule E 117217068 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] E 117216274 protein argonaute-2 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C E 117209450 protein argonaute-2 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C E 117210764 eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E E 117205211 eukaryotic translation initiation factor 4E-1A-like isoform X1 K03259 EIF4E; translation initiation factor 4E E 117213905 regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E 117209445 putative ATP-dependent RNA helicase Pl10 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E 117205521 ATP-dependent RNA helicase me31b K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E 117213637 RNA-binding protein MEX3B K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] E 117207112 protein LSM14 homolog B-A isoform X1 K18749 LSM14; protein LSM14 E 117206412 Y-box-binding protein 1 isoform X1 K09276 YBX1; Y-box-binding protein 1 E 117216375 LIM domain-containing protein jub K16682 AJUBA; LIM domain-containing protein E 117210726 putative helicase mov-10-B.1 isoform X1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] E 117209556 proline-rich nuclear receptor coactivator 2-like K18751 PNRC2; proline-rich nuclear receptor coactivator 2 E 117213651 transportin-1 isoform X1 K18752 TNPO1; transportin-1 E 117204161 serine/threonine-protein kinase SMG1 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] E 117213733 protein SMG5 K11125 SMG5; protein SMG5 E 117207319 telomerase-binding protein EST1A-like isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-] E 117208088 protein SMG7-like K14409 SMG7; protein SMG7 E 117213482 mRNA decay activator protein ZFP36L2-A isoform X1 K15308 TTP; tristetraprolin E 117216289 huntingtin isoform X1 K04533 HD; huntingtin E 117210691 protein bicaudal C homolog 1-B isoform X1 K18756 BICC1; protein bicaudal C E 117204828 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 E 117208338 cAMP-dependent protein kinase catalytic subunit 1 K04345 PKA; protein kinase A [EC:2.7.11.11] E 117210935 cAMP-dependent protein kinase catalytic subunit 1-like K04345 PKA; protein kinase A [EC:2.7.11.11] E 117213571 la-related protein 1B isoform X1 K18757 LARP1; la-related protein 1 E 117212215 ataxin-2-like protein isoform X1 K23625 ATXN2_2L; ataxin 2/2L D P-body specific factors E 117210526 m7GpppN-mRNA hydrolase K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E 117216571 mRNA-decapping enzyme 1A K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] E 117209295 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E 117205299 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 E 117210644 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E 117204770 U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E 117207725 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E 117212414 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E 117211337 U6 snRNA-associated Sm-like protein LSm7 isoform X1 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E 117205648 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 E 117207985 kinesin light chain isoform X1 K10407 KLC; kinesin light chain E 117216581 unconventional myosin-Va isoform X1 K10357 MYO5; myosin V E 117205623 tubulin alpha chain-like isoform X1 K07374 TUBA; tubulin alpha E 117205659 tubulin alpha-1 chain-like K07374 TUBA; tubulin alpha E 117213754 tubulin alpha-1 chain-like K07374 TUBA; tubulin alpha E 117207436 tubulin alpha-1 chain K07374 TUBA; tubulin alpha E 117216910 tubulin alpha-1C chain-like isoform X1 K07374 TUBA; tubulin alpha E 117208916 tubulin alpha-1 chain-like K07374 TUBA; tubulin alpha E 117209921 tubulin alpha chain-like isoform X1 K07374 TUBA; tubulin alpha E 117210542 cytoplasmic polyadenylation element-binding protein 2-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 117212161 cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein E 117208811 gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5 E 117216869 protein Gawky isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein E 117204563 CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E 117212315 regulator of gene activity isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E 117207931 CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E 117205704 alpha-protein kinase 1 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E 117212943 CCR4-NOT transcription complex subunit 6-like isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E 117213643 CCR4-NOT transcription complex subunit 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 117209010 DIS3-like exonuclease 2 isoform X1 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] E 117216551 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E 117209089 PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 E 117209163 protein Tob1-like K14443 TOB; protein Tob/BTG E 117210791 maternal B9.15 protein-like K14443 TOB; protein Tob/BTG E 117211012 protein BTG2-like K14443 TOB; protein Tob/BTG E 117216622 putative uncharacterized protein DDB_G0271606 isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter E 117213043 protein PAT1 homolog 1 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 E 117206820 enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3 E 117215838 enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4 E 117210368 regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2 E 117209518 regulator of nonsense transcripts 3A-like K14328 UPF3; regulator of nonsense transcripts 3 E 117207376 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] E 117216568 serine-rich adhesin for platelets isoform X1 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] E 117205885 DNA-directed RNA polymerase II subunit RPB7 isoform X1 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 E 117209591 YTH domain-containing family protein 1-like K20102 YTHDF; YTH domain-containing family protein D Stress granule specific factors E 117208598 nucleolysin TIAR isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR E 117205392 nucleolysin TIAR K13201 TIA1; nucleolysin TIA-1/TIAR E 117209543 polyadenylate-binding protein 1 K13126 PABPC; polyadenylate-binding protein E 117205191 double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen E 117208840 synaptic functional regulator FMR1 isoform X1 K15516 FMR; fragile X mental retardation protein E 117214938 ras GTPase-activating protein-binding protein 2 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 E 117205419 eukaryotic translation initiation factor 2A K15026 EIF2A; translation initiation factor 2A E 117217233 eukaryotic translation initiation factor 3 subunit B K03253 EIF3B; translation initiation factor 3 subunit B E 117216847 eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A E 117213134 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E 117204165 eukaryotic translation initiation factor 4B K03258 EIF4B; translation initiation factor 4B E 117213706 eukaryotic translation initiation factor 4 gamma 2 isoform X1 K03260 EIF4G; translation initiation factor 4G E 117216190 eukaryotic translation initiation factor 4 gamma 3-like isoform X1 K03260 EIF4G; translation initiation factor 4G E 117204979 ribosomal protein S6 kinase 2 beta-like isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] E 117204083 guanine nucleotide-binding protein subunit beta-like protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein E 117208285 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor E 117217032 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor E 117211596 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor E 117212108 histone deacetylase 6 K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] E 117206691 tudor domain-containing protein 3 isoform X1 K18404 TDRD3; tudor domain-containing protein 3 E 117204891 la-related protein Larp4B isoform X1 K18763 LARP4; la-related protein 4 B mRNA degradation factors C 5'-3' decay D Decapping complex E 117216571 mRNA-decapping enzyme 1A K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] E 117210526 m7GpppN-mRNA hydrolase K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E 117205521 ATP-dependent RNA helicase me31b K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E 117206820 enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3 E 117215838 enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4 E 117213043 protein PAT1 homolog 1 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 D Lsm complex E 117209295 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E 117205299 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 E 117210644 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E 117204770 U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E 117207725 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E 117212414 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E 117211337 U6 snRNA-associated Sm-like protein LSm7 isoform X1 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E 117205648 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 D 5' exonucleases E 117217068 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] E 117213156 5'-3' exoribonuclease 2 homolog K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D Other 5'-3' decay factors E 117217115 m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] E 117208712 probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] C 3'-5' decay D Core exosome factors E 117205670 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4 E 117205889 uncharacterized protein LOC117205889 K03679 RRP4; exosome complex component RRP4 E 117206169 exosome complex component RRP40 K03681 RRP40; exosome complex component RRP40 E 117208952 exosome complex component RRP41 isoform X1 K11600 RRP41; exosome complex component RRP41 E 117208639 exosome complex component RRP46 K12590 RRP46; exosome complex component RRP46 E 117212014 exosome complex component MTR3-like K12587 MTR3; exosome complex component MTR3 E 117210868 exosome complex component RRP42 isoform X1 K12589 RRP42; exosome complex component RRP42 E 117209262 exosome complex component RRP43-like K12586 RRP43; exosome complex component RRP43 E 117207029 exosome complex component RRP45-like K03678 RRP45; exosome complex component RRP45 D Exosome cofactors E 117213965 exosome complex exonuclease RRP44 isoform X1 K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] E 117206367 exosome component 10 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] E 117211441 nuclear nucleic acid-binding protein C1D-like K12592 C1D; exosome complex protein LRP1 E 117208154 M-phase phosphoprotein 6 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type D TRAMP complex E 117214708 terminal nucleotidyltransferase 4B-like K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] E 117210823 exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] D Ski complex E 117205329 helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] E 117214582 tetratricopeptide repeat protein 37 K12600 SKI3; superkiller protein 3 E 117206219 WD repeat-containing protein 61 isoform X1 K12602 WDR61; WD repeat-containing protein 61 D Ccr4-NOT complex E 117212943 CCR4-NOT transcription complex subunit 6-like isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E 117204563 CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E 117212315 regulator of gene activity isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E 117207931 CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E 117205704 alpha-protein kinase 1 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E 117213643 CCR4-NOT transcription complex subunit 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E 117206411 CCR4-NOT transcription complex subunit 9 K12606 RCD1; CCR4-NOT transcription complex subunit 9 E 117204377 CCR4-NOT transcription complex subunit 10 K12607 CNOT10; CCR4-NOT transcription complex subunit 10 D Pan complex E 117216551 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E 117209089 PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 D Other 3'-5' decay factors E 117206904 poly(A)-specific ribonuclease PARN-like isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] E 117210263 pre-piRNA 3'-exonuclease trimmer-like isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] E 117212538 ATP-dependent DNA/RNA helicase DHX36 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] E 117209163 protein Tob1-like K14443 TOB; protein Tob/BTG E 117210791 maternal B9.15 protein-like K14443 TOB; protein Tob/BTG E 117211012 protein BTG2-like K14443 TOB; protein Tob/BTG E 117217115 m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] E 117207140 2',5'-phosphodiesterase 12-like K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] E 117208712 probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] E 117212240 nuclear exosome regulator NRDE2 K26109 NRDE2; nuclear exosome regulator NRDE2 E 117209613 protein Smaug homolog 1 K27396 SMG; protein Smaug E 117204997 uncharacterized protein LOC117204997 K27498 FOCAD; focadhesin C Other degradation factors D RNases E 117208093 probable ribonuclease ZC3H12C isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] E 117209152 mucin-5AC-like K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E 117206000 ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] E 117210870 oligoribonuclease-like isoform X1 K13288 orn; oligoribonuclease [EC:3.1.-.-] E 117211577 probable oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Helicases D Other RNA degradosome components E 117213525 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E 117210309 enolase-like isoform X1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E 117207624 polyribonucleotide nucleotidyltransferase 1, mitochondrial K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E 117209342 ATP-dependent 6-phosphofructokinase isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C Other RNA degradation factors D Chaperones E 117208579 heat shock 70 kDa protein cognate 5 K04043 dnaK; molecular chaperone DnaK E 117206369 heat shock protein 60A K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Others D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome E 117205889 uncharacterized protein LOC117205889 K03679 RRP4; exosome complex component RRP4 E 117205670 exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4 D Cofactors E 117208952 exosome complex component RRP41 isoform X1 K11600 RRP41; exosome complex component RRP41 E 117210868 exosome complex component RRP42 isoform X1 K12589 RRP42; exosome complex component RRP42 D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024