+D GENES KO #

  KEGG Orthology (KO) - Bifidobacterium dentium JCM 1195 = DSM 20436

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:bdn00010] D BBDE_0320 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BBDE_0080 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BBDE_1089 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BBDE_1439 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BBDE_1086 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D BBDE_0492 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BBDE_1167 putative phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BBDE_0830 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BBDE_0864 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BBDE_1246 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BBDE_1479 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BBDE_0407 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D BBDE_1293 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D BBDE_1442 putative aldose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D BBDE_0459 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BBDE_1274 putative glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] C 00020 Citrate cycle (TCA cycle) [PATH:bdn00020] D BBDE_0608 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D BBDE_1377 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D BBDE_1152 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D BBDE_1246 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BBDE_1117 succinyl-CoA synthase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D BBDE_1118 succinyl-CoA synthase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BBDE_0769 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D BBDE_0768 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] C 00030 Pentose phosphate pathway [PATH:bdn00030] D BBDE_0320 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BBDE_0812 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D BBDE_0810 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D BBDE_0809 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D BBDE_0282 6-phosphogluconate dehydrogenase-like protein K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D BBDE_1135 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D BBDE_1094 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D BBDE_1093 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D BBDE_0455 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D BBDE_0013 putative 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43] D BBDE_0014 conserved hypothetical protein K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D BBDE_0963 xylulose-5-phosphate/fructose-6-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D BBDE_1905 sugar kinase K00852 rbsK; ribokinase [EC:2.7.1.15] D BBDE_0459 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BBDE_1904 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D BBDE_1201 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D BBDE_0284 carbohydrate kinase K00851 idnK; gluconokinase [EC:2.7.1.12] D BBDE_0012 conserved hypothetical protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D BBDE_0080 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] C 00040 Pentose and glucuronate interconversions [PATH:bdn00040] D BBDE_1601 short-chain dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D BBDE_1986 glycosyl hydrolase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D BBDE_1914 putative UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D BBDE_1110 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D BBDE_1814 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D BBDE_1135 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D BBDE_1813 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D BBDE_0548 xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D BBDE_0535 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] C 00051 Fructose and mannose metabolism [PATH:bdn00051] D BBDE_1360 glycosyl hydrolase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D BBDE_1997 glycoside hydrolase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D BBDE_1457 putative sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D BBDE_0497 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D BBDE_0319 conserved hypothetical protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D BBDE_0535 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D BBDE_0080 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BBDE_1089 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BBDE_1696 putative glucose kinase K00881 alsK; allose kinase [EC:2.7.1.55] D BBDE_1695 allulose-6-phosphate 3-epimerase K17195 alsE; D-allulose-6-phosphate 3-epimerase [EC:5.1.3.-] C 00052 Galactose metabolism [PATH:bdn00052] D BBDE_1442 putative aldose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D BBDE_1698 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D BBDE_1699 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D BBDE_0507 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D BBDE_1110 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D BBDE_0459 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BBDE_1563 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BBDE_0210 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BBDE_2079 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BBDE_0630 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D BBDE_1597 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D BBDE_1801 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D BBDE_2015 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D BBDE_0234 putative UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D BBDE_0215 putative alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BBDE_1976 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BBDE_2095 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BBDE_0124 glycosyl hydrolase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BBDE_0465 putative alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BBDE_1968 putative alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BBDE_2039 putative sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D BBDE_1523 beta-fructofuranosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D BBDE_0597 putative alpha-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D BBDE_2070 putative alpha-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D BBDE_0101 glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D BBDE_2068 putative amylase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D BBDE_2088 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] C 00053 Ascorbate and aldarate metabolism [PATH:bdn00053] D BBDE_1914 putative UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D BBDE_1986 glycosyl hydrolase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D BBDE_1814 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] C 00500 Starch and sucrose metabolism [PATH:bdn00500] D BBDE_2039 putative sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D BBDE_1523 beta-fructofuranosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D BBDE_0597 putative alpha-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D BBDE_2070 putative alpha-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D BBDE_0101 glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D BBDE_2068 putative amylase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D BBDE_0346 glycosyl hydrolase K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4] D BBDE_0099 sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7] D BBDE_1110 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D BBDE_1592 glycosyl hydrolase K01210 E3.2.1.58; glucan 1,3-beta-glucosidase [EC:3.2.1.58] D BBDE_1593 putative beta-1,3-exoglucanase K01210 E3.2.1.58; glucan 1,3-beta-glucosidase [EC:3.2.1.58] D BBDE_0196 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_0487 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_1572 putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_1586 putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_1590 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_2119 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_2120 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_2122 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_2020 putative glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_0208 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_2081 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_0908 6-phospho-beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D BBDE_0114 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D BBDE_2017 putative cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D BBDE_2018 putative cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D BBDE_1998 putative cellobiose phosphorylase K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20] D BBDE_0994 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D BBDE_0853 glycosyl hydrolase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D BBDE_0027 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D BBDE_0986 amylopullulanase K01200 pulA; pullulanase [EC:3.2.1.41] D BBDE_2064 pullulanase precursor K01200 pulA; pullulanase [EC:3.2.1.41] D BBDE_2088 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D BBDE_0400 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D BBDE_2069 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D BBDE_1855 putative amylase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D BBDE_1035 putative glycosyltransferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D BBDE_0951 glycosyl hydrolase K01214 ISA; isoamylase [EC:3.2.1.68] D BBDE_0403 glycosyl hydrolase K01214 ISA; isoamylase [EC:3.2.1.68] D BBDE_0459 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BBDE_0320 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BBDE_1457 putative sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bdn00520] D BBDE_1954 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D BBDE_1457 putative sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D BBDE_0622 D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D BBDE_1660 phosphomannomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D BBDE_1176 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D BBDE_1974 putative anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D BBDE_0262 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BBDE_0390 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D BBDE_0631 alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D BBDE_1930 putative dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D BBDE_2016 putative beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D BBDE_0541 beta-1,4-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D BBDE_1591 putative beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D BBDE_0536 putative hydrolase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D BBDE_1274 putative glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D BBDE_0459 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BBDE_1110 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D BBDE_1914 putative UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D BBDE_1698 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D BBDE_1699 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D BBDE_0507 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D BBDE_0234 putative UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D BBDE_0320 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BBDE_0497 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D BBDE_0319 conserved hypothetical protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D BBDE_0994 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:bdn00620] D BBDE_1246 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BBDE_1313 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D BBDE_0407 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D BBDE_1293 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D BBDE_0965 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D BBDE_0964 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D BBDE_0864 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BBDE_0342 propionyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D BBDE_0097 conserved hypothetical protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D BBDE_1479 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BBDE_1300 hypothetical protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D BBDE_1619 lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D BBDE_1071 malolactic enzyme K22212 mleA; malolactic enzyme [EC:4.1.1.101] D BBDE_0021 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D BBDE_0223 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bdn00630] D BBDE_0608 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D BBDE_1377 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D BBDE_0343 propionyl-CoA carboxylase beta subunit K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D BBDE_0342 propionyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D BBDE_0097 conserved hypothetical protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D BBDE_1105 putative hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D BBDE_1249 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BBDE_1485 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BBDE_1205 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BBDE_1246 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BBDE_1711 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D BBDE_1314 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D BBDE_0514 putative oxidoreductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] D BBDE_1853 thiamine pyrophosphate-dependent enzyme K01577 oxc; oxalyl-CoA decarboxylase [EC:4.1.1.8] C 00640 Propanoate metabolism [PATH:bdn00640] D BBDE_0965 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D BBDE_0964 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D BBDE_1246 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BBDE_1313 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D BBDE_0342 propionyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D BBDE_0097 conserved hypothetical protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D BBDE_2012 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D BBDE_0343 propionyl-CoA carboxylase beta subunit K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D BBDE_1118 succinyl-CoA synthase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BBDE_1117 succinyl-CoA synthase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D BBDE_1479 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BBDE_0514 putative oxidoreductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] C 00650 Butanoate metabolism [PATH:bdn00650] D BBDE_0407 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D BBDE_0769 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D BBDE_0768 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D BBDE_1657 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D BBDE_2012 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D BBDE_2003 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D BBDE_2011 putative 4-hydroxybutyrate dehydrogenase K18120 4hbD; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61] D BBDE_1313 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D BBDE_2133 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BBDE_0305 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BBDE_0304 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:bdn00660] D BBDE_2133 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BBDE_0305 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BBDE_0304 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D BBDE_1118 succinyl-CoA synthase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BBDE_1117 succinyl-CoA synthase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D BBDE_0255 isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D BBDE_0256 isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D BBDE_1708 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:bdn00562] D BBDE_0721 putative inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D BBDE_0233 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D BBDE_1089 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:bdn00190] D BBDE_0769 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D BBDE_0768 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D BBDE_1845 ATP synthase alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D BBDE_1843 ATP synthase beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D BBDE_1844 ATP synthase gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D BBDE_1846 ATP synthase delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D BBDE_1842 ATP synthase epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D BBDE_1849 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D BBDE_1847 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D BBDE_1848 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D BBDE_1856 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D BBDE_0193 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:bdn00710] D BBDE_1086 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D BBDE_1439 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BBDE_0080 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BBDE_1094 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D BBDE_0455 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D BBDE_1089 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BBDE_1135 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D BBDE_1093 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D BBDE_0021 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] C 00720 Other carbon fixation pathways [PATH:bdn00720] D BBDE_0021 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D BBDE_0769 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D BBDE_0768 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D BBDE_1117 succinyl-CoA synthase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D BBDE_1118 succinyl-CoA synthase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BBDE_1152 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D BBDE_1377 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D BBDE_0245 formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D BBDE_0859 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D BBDE_1040 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D BBDE_0964 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D BBDE_0965 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:bdn00680] D BBDE_1205 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BBDE_0830 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BBDE_0021 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D BBDE_0080 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BBDE_0014 conserved hypothetical protein K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D BBDE_0013 putative 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43] D BBDE_0965 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D BBDE_0964 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D BBDE_0492 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BBDE_1167 putative phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BBDE_1474 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D BBDE_0498 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D BBDE_0718 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:bdn00910] D BBDE_0008 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D BBDE_1249 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BBDE_1485 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BBDE_1032 glutamate synthase alpha subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D BBDE_1033 glutamate synthase beta subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D BBDE_0019 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:bdn00920] D BBDE_1727 putative acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D BBDE_1850 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D BBDE_0642 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:bdn00061] D BBDE_0342 propionyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D BBDE_0097 conserved hypothetical protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D BBDE_0344 fatty acid synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D BBDE_1149 putative long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BBDE_1154 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BBDE_1003 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BBDE_1809 putative long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:bdn00071] D BBDE_1149 putative long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BBDE_1154 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BBDE_1003 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BBDE_1809 putative long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BBDE_0407 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D BBDE_1293 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:bdn00121] D BBDE_1060 choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:bdn00561] D BBDE_1314 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D BBDE_1223 conserved hypothetical protein K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21] D BBDE_1348 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D BBDE_0462 putative kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D BBDE_0205 conserved hypothetical protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D BBDE_0287 conserved hypothetical protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D BBDE_0697 putative glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D BBDE_0215 putative alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BBDE_1976 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BBDE_2095 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BBDE_0124 glycosyl hydrolase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BBDE_0465 putative alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BBDE_1968 putative alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:bdn00564] D BBDE_0269 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D BBDE_1348 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D BBDE_0462 putative kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D BBDE_0205 conserved hypothetical protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D BBDE_0045 conserved hypothetical protein K01048 pldB; lysophospholipase [EC:3.1.1.5] D BBDE_1143 putative phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D BBDE_1127 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D BBDE_1358 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D BBDE_1132 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:bdn00600] D BBDE_1594 glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45] D BBDE_1563 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BBDE_0210 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BBDE_2079 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BBDE_0215 putative alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BBDE_1976 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BBDE_2095 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BBDE_0124 glycosyl hydrolase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BBDE_0465 putative alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D BBDE_1968 putative alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D BBDE_0528 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:bdn00230] D BBDE_0865 putative NTP pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D BBDE_0950 putative hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D BBDE_0459 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BBDE_1904 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D BBDE_1201 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D BBDE_0690 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D BBDE_0688 phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D BBDE_0696 phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D BBDE_0694 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D BBDE_0689 phosphoribosylaminoimidazole synthase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D BBDE_0685 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D BBDE_0684 phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D BBDE_0695 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D BBDE_0728 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D BBDE_1115 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D BBDE_1119 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D BBDE_1187 conserved hypothetical protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D BBDE_1648 conserved hypothetical protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D BBDE_0358 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D BBDE_0522 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D BBDE_0594 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D BBDE_1151 inositol-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D BBDE_0317 conserved hypothetical protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D BBDE_0968 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D BBDE_0962 GMP synthase/glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D BBDE_0302 putative amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D BBDE_0709 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D BBDE_1606 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D BBDE_0649 putative deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D BBDE_1332 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D BBDE_0834 putative exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D BBDE_1622 putative exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D BBDE_1364 conserved hypothetical protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D BBDE_1825 conserved hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D BBDE_0082 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D BBDE_1296 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D BBDE_0431 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:bdn00240] D BBDE_0707 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D BBDE_0706 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D BBDE_1044 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D BBDE_1045 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D BBDE_1046 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D BBDE_1049 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D BBDE_1048 putative dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D BBDE_1702 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D BBDE_1050 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D BBDE_0708 putative orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D BBDE_1047 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D BBDE_1145 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D BBDE_1817 conserved hypothetical protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D BBDE_0987 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D BBDE_1187 conserved hypothetical protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D BBDE_1648 conserved hypothetical protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D BBDE_0190 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D BBDE_1812 ribonucleoside hydrolase K10213 rihB; ribosylpyrimidine nucleosidase [EC:3.2.2.8] D BBDE_1606 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D BBDE_2099 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D BBDE_0238 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D BBDE_1333 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D BBDE_0503 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:bdn00250] D BBDE_0333 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BBDE_0281 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BBDE_1448 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D BBDE_0054 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D BBDE_1437 asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D BBDE_1092 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D BBDE_0295 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D BBDE_1231 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D BBDE_1230 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D BBDE_0082 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D BBDE_0728 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D BBDE_1044 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D BBDE_1045 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D BBDE_1657 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D BBDE_2012 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D BBDE_2003 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D BBDE_1032 glutamate synthase alpha subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D BBDE_1033 glutamate synthase beta subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D BBDE_0008 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D BBDE_1249 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BBDE_1485 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BBDE_0707 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D BBDE_0706 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D BBDE_0622 D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D BBDE_0690 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:bdn00260] D BBDE_0218 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D BBDE_0220 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D BBDE_1819 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D BBDE_1818 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D BBDE_1206 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D BBDE_0698 conserved hypothetical protein K01620 ltaE; threonine aldolase [EC:4.1.2.48] D BBDE_1205 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BBDE_1314 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D BBDE_0492 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BBDE_1167 putative phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BBDE_1474 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D BBDE_0498 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D BBDE_0718 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D BBDE_1246 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BBDE_1711 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D BBDE_0641 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D BBDE_0836 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D BBDE_2087 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D BBDE_1137 tryptophan synthase alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D BBDE_1138 tryptophan synthase beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:bdn00270] D BBDE_1727 putative acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D BBDE_0667 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BBDE_0046 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BBDE_0641 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D BBDE_1039 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D BBDE_0714 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D BBDE_0365 putative nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D BBDE_0358 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D BBDE_0666 aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117] D BBDE_1406 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BBDE_0452 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D BBDE_0645 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D BBDE_0218 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D BBDE_0220 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D BBDE_1819 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D BBDE_1850 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D BBDE_0642 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D BBDE_0534 putative O-acetylhomoserine (thiol)-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D BBDE_0775 O-acetylhomoserine (thiol)-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D BBDE_1027 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D BBDE_1603 putative glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D BBDE_0333 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BBDE_0281 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BBDE_1479 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BBDE_0836 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D BBDE_1474 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D BBDE_0498 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:bdn00280] D BBDE_1027 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D BBDE_1246 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BBDE_0343 propionyl-CoA carboxylase beta subunit K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D BBDE_0342 propionyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D BBDE_0097 conserved hypothetical protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D BBDE_2012 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:bdn00290] D BBDE_2087 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D BBDE_0255 isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D BBDE_0256 isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D BBDE_1708 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D BBDE_2133 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BBDE_0305 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BBDE_0304 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D BBDE_0108 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D BBDE_0109 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D BBDE_0712 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D BBDE_1027 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D BBDE_1092 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D BBDE_0223 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:bdn00300] D BBDE_1819 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D BBDE_0218 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D BBDE_0220 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D BBDE_1663 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D BBDE_1669 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D BBDE_0610 conserved hypothetical protein K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D BBDE_1234 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D BBDE_1020 conserved hypothetical protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D BBDE_0327 dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D BBDE_1547 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D BBDE_1821 putative diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D BBDE_1445 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BBDE_1446 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BBDE_1467 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:bdn00310] D BBDE_1246 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BBDE_2012 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D BBDE_2003 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00220 Arginine biosynthesis [PATH:bdn00220] D BBDE_1233 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D BBDE_1231 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D BBDE_1230 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D BBDE_1249 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BBDE_1485 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BBDE_0707 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D BBDE_0706 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D BBDE_0008 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D BBDE_0333 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BBDE_0281 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BBDE_1092 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D BBDE_1236 ornithine acetyltransferase/N-acetylglutamate synthase protein K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D BBDE_1235 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D BBDE_1237 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D BBDE_1234 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D BBDE_1020 conserved hypothetical protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:bdn00330] D BBDE_2109 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D BBDE_0785 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D BBDE_0332 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D BBDE_1204 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D BBDE_0333 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BBDE_0281 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:bdn00340] D BBDE_1133 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D BBDE_1134 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D BBDE_1140 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D BBDE_1499 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D BBDE_1500 imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D BBDE_1141 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D BBDE_1502 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D BBDE_1503 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BBDE_1504 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:bdn00350] D BBDE_0333 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BBDE_0281 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BBDE_1503 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BBDE_0407 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D BBDE_1293 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D BBDE_2003 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:bdn00360] D BBDE_0333 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BBDE_0281 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BBDE_1503 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BBDE_2109 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:bdn00380] D BBDE_1246 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BBDE_2109 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bdn00400] D BBDE_0363 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D BBDE_0364 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D BBDE_0983 shikimate kinase/3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4] D BBDE_0984 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D BBDE_0953 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D BBDE_0982 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D BBDE_1139 anthranilate synthase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D BBDE_1350 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D BBDE_1499 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D BBDE_1137 tryptophan synthase alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D BBDE_1138 tryptophan synthase beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D BBDE_1864 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5] D BBDE_1425 putative chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D BBDE_1424 putative prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D BBDE_0333 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BBDE_0281 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BBDE_1503 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:bdn00410] D BBDE_1657 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D BBDE_2012 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] C 00430 Taurine and hypotaurine metabolism [PATH:bdn00430] D BBDE_1657 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D BBDE_0964 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D BBDE_0965 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:bdn00450] D BBDE_0642 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D BBDE_0667 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BBDE_0046 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BBDE_1039 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D BBDE_0991 aminotransferase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D BBDE_2134 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D BBDE_1992 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:bdn00460] D BBDE_0196 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_0487 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_1572 putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_1586 putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_1590 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_2119 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_2120 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_2122 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_2020 putative glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_0208 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_2081 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_0908 6-phospho-beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D BBDE_0114 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D BBDE_0054 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D BBDE_1205 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:bdn00470] D BBDE_0648 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D BBDE_0270 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BBDE_1548 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D BBDE_1465 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D BBDE_0098 conserved hypothetical protein K22210 DGLUCY; D-glutamate cyclase [EC:4.2.1.48] D BBDE_1448 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D BBDE_1547 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D BBDE_1821 putative diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:bdn00480] D BBDE_0095 conserved hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D BBDE_1603 putative glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D BBDE_1661 aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D BBDE_1152 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D BBDE_0809 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D BBDE_0282 6-phosphogluconate dehydrogenase-like protein K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D BBDE_0812 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:bdn00515] D BBDE_1996 glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:bdn00514] D BBDE_1996 glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:bdn00511] D BBDE_1563 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BBDE_0210 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BBDE_2079 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BBDE_0118 glycosyl hydrolase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25] D BBDE_2021 putative alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D BBDE_1594 glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:bdn00542] D BBDE_0583 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bdn00541] D BBDE_1110 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D BBDE_0507 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D BBDE_0234 putative UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D BBDE_1914 putative UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D BBDE_1759 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D BBDE_1761 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D BBDE_1760 dTDP-4-dehydrorhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] D BBDE_0497 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D BBDE_0319 conserved hypothetical protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D BBDE_1176 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:bdn00550] D BBDE_0262 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BBDE_0390 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D BBDE_1462 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D BBDE_1465 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D BBDE_1445 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BBDE_1446 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BBDE_0270 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BBDE_1467 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D BBDE_1531 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D BBDE_1098 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D BBDE_1466 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D BBDE_1463 N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D BBDE_1469 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D BBDE_0037 putative penicillin binding protein transpeptidase K05364 pbpA; penicillin-binding protein A D BBDE_0520 conserved hypothetical protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D BBDE_0181 conserved hypothetical protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D BBDE_0182 cobyric acid synthase CobQ K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:bdn00552] D BBDE_1098 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D BBDE_0583 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D BBDE_0697 putative glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D BBDE_1933 conserved hypothetical protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:bdn00543] D BBDE_0583 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D BBDE_1727 putative acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D BBDE_1735 hypothetical protein K13663 gumF; acyltransferase [EC:2.3.1.-] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:bdn00730] D BBDE_1518 thiamine biosynthesis protein K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D BBDE_1519 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D BBDE_0138 thiamine biosynthesis protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D BBDE_0682 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D BBDE_0137 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D BBDE_1517 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D BBDE_2050 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D BBDE_1438 putative thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D BBDE_0431 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D BBDE_1279 transcriptional activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D BBDE_2010 truncated conserved hypothetical protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:bdn00740] D BBDE_0446 riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D BBDE_2084 putative nitroreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38] D BBDE_1517 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D BBDE_0865 putative NTP pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D BBDE_0950 putative hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:bdn00750] D BBDE_0773 putative pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D BBDE_0140 putative oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D BBDE_0352 putative oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D BBDE_0498 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D BBDE_1206 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D BBDE_1807 conserved hypothetical protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D BBDE_1806 putative amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:bdn00760] D BBDE_0314 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D BBDE_1187 conserved hypothetical protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D BBDE_1648 conserved hypothetical protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D BBDE_1202 nicotinic acid mononucleotide adenyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D BBDE_1713 conserved hypothetical protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D BBDE_1318 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D BBDE_1357 putative competence-damage inducible protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D BBDE_1069 putative amidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D BBDE_2086 putative transcriptional regulator K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D BBDE_1219 kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D BBDE_1004 NAD(P) transhydrogenase alpha-1 subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D BBDE_1005 NAD(P) transhydrogenase alpha-2 subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D BBDE_1006 NAD(P) transhydrogenase beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D BBDE_2003 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:bdn00770] D BBDE_2133 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BBDE_0305 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BBDE_0304 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D BBDE_0108 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D BBDE_0109 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D BBDE_0712 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D BBDE_0661 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D BBDE_0634 conserved hypothetical protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D BBDE_0635 putative flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D BBDE_0310 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D BBDE_0861 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D BBDE_0345 putative 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D BBDE_1027 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism [PATH:bdn00780] D BBDE_0340 conserved hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:bdn00785] D BBDE_1706 putative lipoate protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D BBDE_1246 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BBDE_1711 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:bdn00790] D BBDE_0524 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D BBDE_2050 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D BBDE_0526 conserved hypothetical protein K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3] D BBDE_0525 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D BBDE_0504 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D BBDE_1449 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D BBDE_0034 para-aminobenzoate synthase glutamine amidotransferase K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D BBDE_0093 conserved hypothetical protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] C 00670 One carbon pool by folate [PATH:bdn00670] D BBDE_0504 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D BBDE_0245 formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D BBDE_0859 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D BBDE_1205 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BBDE_1115 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D BBDE_0717 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D BBDE_0503 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D BBDE_1040 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D BBDE_0384 conserved hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:bdn00860] D BBDE_0252 glutamyl-tRNA synthase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BBDE_1986 glycosyl hydrolase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:bdn00130] D BBDE_1768 conserved hypothetical protein K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D BBDE_0491 putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D BBDE_0451 putative chlorohydrolase K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40] D BBDE_1610 conserved hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:bdn00900] D BBDE_0682 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D BBDE_1535 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D BBDE_0359 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D BBDE_1931 conserved hypothetical protein K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D BBDE_2127 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D BBDE_0855 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D BBDE_1534 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D BBDE_1441 putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D BBDE_1346 isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D BBDE_1531 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D BBDE_1094 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:bdn00523] D BBDE_1759 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D BBDE_1761 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D BBDE_1760 dTDP-4-dehydrorhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:bdn01054] D BBDE_1448 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D BBDE_1761 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:bdn00946] D BBDE_0196 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_0487 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_1572 putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_1586 putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_1590 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_2119 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_2120 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_2122 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_2020 putative glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_0208 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_2081 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_0908 6-phospho-beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D BBDE_0114 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D BBDE_0149 putative alpha-L-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:bdn00332] D BBDE_0332 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D BBDE_1204 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:bdn00261] D BBDE_0218 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D BBDE_0220 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D BBDE_1663 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D BBDE_1669 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:bdn00521] D BBDE_0459 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BBDE_0233 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D BBDE_0721 putative inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D BBDE_1759 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D BBDE_1761 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D BBDE_1760 dTDP-4-dehydrorhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:bdn00525] D BBDE_1759 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D BBDE_1761 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:bdn00401] D BBDE_1424 putative prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D BBDE_0333 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BBDE_0281 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BBDE_1503 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D BBDE_1139 anthranilate synthase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics C 00999 Biosynthesis of various plant secondary metabolites [PATH:bdn00999] D BBDE_0714 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D BBDE_0196 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_0487 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_1572 putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_1586 putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_1590 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_2119 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_2120 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_2122 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_2020 putative glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_0208 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_2081 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D BBDE_0908 6-phospho-beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D BBDE_0114 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D BBDE_1063 conserved hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] C 00627 Aminobenzoate degradation D BBDE_2109 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:bdn00625] D BBDE_1293 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D BBDE_0407 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D BBDE_1053 putative hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation D BBDE_1053 putative hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:bdn00643] D BBDE_2109 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:bdn00626] D BBDE_1293 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D BBDE_0407 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:bdn03020] D BBDE_1687 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D BBDE_1686 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D BBDE_0436 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D BBDE_0713 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:bdn03010] D BBDE_0860 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D BBDE_1147 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D BBDE_0416 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D BBDE_0973 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D BBDE_0427 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D BBDE_1903 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D BBDE_0701 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D BBDE_0424 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D BBDE_0402 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D BBDE_0409 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D BBDE_0435 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D BBDE_0700 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D BBDE_0434 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D BBDE_0423 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D BBDE_1779 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D BBDE_0348 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D BBDE_0298 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D BBDE_0419 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D BBDE_1901 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D BBDE_0414 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D BBDE_1029 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D BBDE_0337 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D BBDE_0413 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D BBDE_0410 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D BBDE_0411 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D BBDE_0422 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D BBDE_0425 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D BBDE_0377 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D BBDE_1900 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D BBDE_0376 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D BBDE_0336 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D BBDE_0401 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D BBDE_0420 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D BBDE_0429 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D BBDE_0417 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D BBDE_0437 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D BBDE_0426 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D BBDE_0321 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D BBDE_1434 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D BBDE_0329 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D BBDE_0415 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D BBDE_0412 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D BBDE_0421 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D BBDE_1026 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D BBDE_0330 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D BBDE_1781 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D BBDE_0291 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D BBDE_0418 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D BBDE_0428 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D BBDE_0574 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D BBDE_1777 putative 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D BBDE_0307 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D BBDE_0389 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D BBDE_1780 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D BBDE_2141 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D BBDE_1435 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D BBDE_1778 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D BBDE_0433 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D BBDE_16SrRNA04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BBDE_16SrRNA02 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BBDE_16SrRNA03 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BBDE_16SrRNA01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BBDE_23SrRNA02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BBDE_23SrRNA03 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BBDE_23SrRNA04 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BBDE_23SrRNA01 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BBDE_5SrRNA02 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BBDE_5SrRNA03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BBDE_5SrRNA04 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BBDE_5SrRNA01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:bdn00970] D BBDE_tRNA02 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BBDE_tRNA55 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BBDE_tRNA46 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BBDE_tRNA01 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BBDE_tRNA31 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BBDE_tRNA50 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BBDE_tRNA32 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BBDE_tRNA51 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BBDE_tRNA26 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BBDE_tRNA38 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BBDE_tRNA45 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BBDE_tRNA37 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BBDE_tRNA23 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D BBDE_tRNA21 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D BBDE_tRNA41 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D BBDE_tRNA08 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D BBDE_tRNA48 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D BBDE_tRNA07 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D BBDE_tRNA22 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D BBDE_tRNA05 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BBDE_tRNA12 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BBDE_tRNA39 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BBDE_tRNA40 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BBDE_tRNA27 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BBDE_tRNA30 tRNA-His K14226 tRNA-His; tRNA His D BBDE_tRNA03 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D BBDE_tRNA04 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BBDE_tRNA09 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BBDE_tRNA33 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BBDE_tRNA34 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BBDE_tRNA36 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BBDE_tRNA06 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BBDE_tRNA53 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BBDE_tRNA15 tRNA-Met K14230 tRNA-Met; tRNA Met D BBDE_tRNA52 tRNA-Met K14230 tRNA-Met; tRNA Met D BBDE_tRNA25 tRNA-Met K14230 tRNA-Met; tRNA Met D BBDE_tRNA20 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D BBDE_tRNA24 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D BBDE_tRNA35 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BBDE_tRNA19 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BBDE_tRNA44 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BBDE_tRNA18 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BBDE_tRNA17 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BBDE_tRNA54 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BBDE_tRNA16 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BBDE_tRNA14 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BBDE_tRNA10 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BBDE_tRNA56 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BBDE_tRNA11 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D BBDE_tRNA13 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D BBDE_tRNA29 tRNA-Val K14237 tRNA-Val; tRNA Val D BBDE_tRNA42 tRNA-Val K14237 tRNA-Val; tRNA Val D BBDE_tRNA28 tRNA-Val K14237 tRNA-Val; tRNA Val D BBDE_tRNA43 tRNA-Val K14237 tRNA-Val; tRNA Val D BBDE_tRNA49 tRNA-Val K14237 tRNA-Val; tRNA Val D BBDE_0252 glutamyl-tRNA synthase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BBDE_1873 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D BBDE_1872 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D BBDE_1874 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D BBDE_0978 alanyl-tRNA synthase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D BBDE_0751 aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BBDE_1514 glycyl-tRNA synthase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BBDE_1128 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D BBDE_0463 seryl-tRNA synthase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D BBDE_0301 cysteinyl-tRNA synthase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D BBDE_1992 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BBDE_0717 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D BBDE_1862 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D BBDE_1164 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BBDE_1561 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D BBDE_0488 lysyl-tRNA synthase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D BBDE_1822 arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BBDE_0603 prolyl-tRNA synthase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D BBDE_0750 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D BBDE_1240 phenylalanyl-tRNA synthase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D BBDE_1239 phenylalanyl-tRNA synthase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D BBDE_1226 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BBDE_0024 tryptophanyl-tRNA synthase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:bdn03060] D BBDE_0430 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D BBDE_0334 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D BBDE_1090 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D BBDE_1120 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC D BBDE_2139 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D BBDE_1351 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BBDE_0300 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D BBDE_0175 signal recognition particle-docking protein K03110 ftsY; fused signal recognition particle receptor D BBDE_0322 putative signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D BBDE_1508 putative lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:bdn04122] D BBDE_0139 conserved hypothetical protein K03154 thiS; sulfur carrier protein D BBDE_0138 thiamine biosynthesis protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome D BBDE_0719 putative ATPase K13527 mpa; proteasome-associated ATPase C 03018 RNA degradation [PATH:bdn03018] D BBDE_0328 ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D BBDE_0830 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BBDE_0349 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D BBDE_0644 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D BBDE_1867 transcription termination factor Rho K03628 rho; transcription termination factor Rho D BBDE_1662 conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D BBDE_2049 chaperone DnaK K04043 dnaK; molecular chaperone DnaK D BBDE_0739 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BBDE_0193 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D BBDE_2129 putative RNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:bdn03030] D BBDE_0895 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BBDE_1308 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BBDE_1506 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BBDE_0216 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BBDE_0239 DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BBDE_1161 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BBDE_0002 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BBDE_0180 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D BBDE_1324 putative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D BBDE_0650 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D BBDE_0604 conserved hypothetical protein K03111 ssb; single-strand DNA-binding protein D BBDE_0896 hypothetical protein K03111 ssb; single-strand DNA-binding protein D BBDE_1902 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BBDE_0456 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D BBDE_0323 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D BBDE_1268 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:bdn03410] D BBDE_1860 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D BBDE_0737 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D BBDE_1689 putative adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D BBDE_1550 conserved hypothetical protein K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D BBDE_1414 putative exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D BBDE_1268 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:bdn03420] D BBDE_0829 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D BBDE_1081 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D BBDE_0862 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D BBDE_1082 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D BBDE_0969 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BBDE_1542 putative DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BBDE_1672 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BBDE_1268 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:bdn03430] D BBDE_0969 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BBDE_1542 putative DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BBDE_1672 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BBDE_1607 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D BBDE_1608 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D BBDE_0604 conserved hypothetical protein K03111 ssb; single-strand DNA-binding protein D BBDE_0896 hypothetical protein K03111 ssb; single-strand DNA-binding protein D BBDE_1902 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BBDE_1506 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BBDE_0002 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BBDE_0216 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BBDE_1161 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BBDE_0239 DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BBDE_0895 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BBDE_1308 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BBDE_1268 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:bdn03440] D BBDE_0604 conserved hypothetical protein K03111 ssb; single-strand DNA-binding protein D BBDE_0896 hypothetical protein K03111 ssb; single-strand DNA-binding protein D BBDE_1902 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BBDE_0003 recombination protein RecF K03629 recF; DNA replication and repair protein RecF D BBDE_1532 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D BBDE_0217 recombination protein RecR K06187 recR; recombination protein RecR D BBDE_1354 recombinase RecA K03553 recA; recombination protein RecA D BBDE_1122 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D BBDE_1121 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D BBDE_1123 holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D BBDE_0292 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D BBDE_1506 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BBDE_0002 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BBDE_0216 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BBDE_1161 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BBDE_0239 DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BBDE_0895 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BBDE_1308 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BBDE_0715 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:bdn03250] D BBDE_1331 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:bdn02010] D BBDE_2104 ABC transporter ATP-binding component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D BBDE_2067 putative ABC transporter substrate binding component K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D BBDE_2066 putative ABC transporter permease component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D BBDE_2065 putative ABC transporter permease component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D BBDE_0538 putative sugar ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BBDE_2043 putative ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BBDE_2093 sugar ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BBDE_0466 putative ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BBDE_2030 putative ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BBDE_0115 sugar ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BBDE_0539 putative sugar ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BBDE_2042 putative ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BBDE_2092 sugar ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BBDE_0467 putative ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BBDE_2029 putative ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BBDE_0116 putative ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BBDE_0540 putative sugar ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BBDE_2041 putative ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BBDE_2091 sugar ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BBDE_0468 putative ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BBDE_2028 putative ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BBDE_2033 putative ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BBDE_0228 putative ABC transporter substrate binding component K17318 lplA; putative aldouronate transport system substrate-binding protein D BBDE_1984 putative ABC transporter substrate binding component K17318 lplA; putative aldouronate transport system substrate-binding protein D BBDE_2000 putative ABC transporter substrate binding component K17318 lplA; putative aldouronate transport system substrate-binding protein D BBDE_2023 putative ABC transporter substrate binding component K17318 lplA; putative aldouronate transport system substrate-binding protein D BBDE_0229 putative ABC transporter permease component K17319 lplB; putative aldouronate transport system permease protein D BBDE_1983 ABC transporter permease component K17319 lplB; putative aldouronate transport system permease protein D BBDE_2025 putative ABC transporter permease component K17319 lplB; putative aldouronate transport system permease protein D BBDE_1982 ABC transporter permease component K17320 lplC; putative aldouronate transport system permease protein D BBDE_2024 putative ABC transporter permease component K17320 lplC; putative aldouronate transport system permease protein D BBDE_0230 putative ABC transporter permease component K17320 lplC; putative aldouronate transport system permease protein D BBDE_0127 putative ABC transporter substrate binding component K10240 cebE; cellobiose transport system substrate-binding protein D BBDE_0128 putative ABC transporter permease component K10241 cebF; cellobiose transport system permease protein D BBDE_0129 putative ABC transporter permease component K10242 cebG; cellobiose transport system permease protein D BBDE_0543 putative ABC transporter substrate binding component K10546 chvE; putative multiple sugar transport system substrate-binding protein D BBDE_1951 putative sugar ABC transporter substrate binding component K10546 chvE; putative multiple sugar transport system substrate-binding protein D BBDE_0545 putative sugar ABC transporter permease component K10547 gguB; putative multiple sugar transport system permease protein D BBDE_1949 putative sugar ABC transporter permease component K10547 gguB; putative multiple sugar transport system permease protein D BBDE_0544 putative ABC transporter ATP-binding component K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D BBDE_1950 putative sugar ABC transporter ATP-binding component K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D BBDE_0162 ribose ABC transporter substrate binding component K10439 rbsB; ribose transport system substrate-binding protein D BBDE_1971 sugar ABC transporter substrate binding component K10439 rbsB; ribose transport system substrate-binding protein D BBDE_1972 sugar ABC transporter permease component K10440 rbsC; ribose transport system permease protein D BBDE_0161 ribose ABC transporter permease component K10440 rbsC; ribose transport system permease protein D BBDE_0160 ribose ABC transporter ATP-binding component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D BBDE_1973 sugar ABC transporter ATP-binding component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D BBDE_0163 conserved hypothetical protein K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D BBDE_0369 phosphate ABC transporter substrate binding component K02040 pstS; phosphate transport system substrate-binding protein D BBDE_0370 truncated phosphate ABC transporter permease component K02037 pstC; phosphate transport system permease protein D BBDE_0371 truncated phosphate ABC transporter permease component K02037 pstC; phosphate transport system permease protein D BBDE_0372 phosphate ABC transporter permease component K02038 pstA; phosphate transport system permease protein D BBDE_0373 phosphate ABC transporter ATP-binding component K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D BBDE_0752 glutamate ABC transporter substrate-binding and permease components K10036 glnH; glutamine transport system substrate-binding protein D BBDE_0753 glutamate ABC transporter ATP-binding component K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D BBDE_0755 glutamate ABC transporter substrate binding component K10005 gluB; glutamate transport system substrate-binding protein D BBDE_1165 ABC transporter substrate binding component K10005 gluB; glutamate transport system substrate-binding protein D BBDE_0756 glutamate ABC transporter permease component K10006 gluC; glutamate transport system permease protein D BBDE_0757 glutamate ABC transporter permease component K10007 gluD; glutamate transport system permease protein D BBDE_0754 glutamate ABC transporter ATP-binding component K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D BBDE_0669 putative amino acid ABC transporter substrate binding component K02424 tcyA; L-cystine transport system substrate-binding protein D BBDE_0670 putative amino acid ABC transporter permease component K10009 tcyB; L-cystine transport system permease protein D BBDE_0577 branched-chain amino acid ABC transporter substrate binding component K01999 livK; branched-chain amino acid transport system substrate-binding protein D BBDE_0091 putative ABC transporter substrate binding component K01999 livK; branched-chain amino acid transport system substrate-binding protein D BBDE_0090 putative ABC transporter substrate binding component K01999 livK; branched-chain amino acid transport system substrate-binding protein D BBDE_0578 branched-chain amino acid ABC transporter permease component K01997 livH; branched-chain amino acid transport system permease protein D BBDE_0086 putative ABC transporter permease component K01997 livH; branched-chain amino acid transport system permease protein D BBDE_0579 branched-chain amino acid ABC transporter permease component K01998 livM; branched-chain amino acid transport system permease protein D BBDE_0087 putative ABC transporter permease component K01998 livM; branched-chain amino acid transport system permease protein D BBDE_0580 branched-chain amino acid ABC transporter ATP-binding component K01995 livG; branched-chain amino acid transport system ATP-binding protein D BBDE_0088 putative ABC transporter ATP-binding component K01995 livG; branched-chain amino acid transport system ATP-binding protein D BBDE_0089 putative ABC transporter ATP-binding component K01996 livF; branched-chain amino acid transport system ATP-binding protein D BBDE_0581 branched-chain amino acid ABC transporter ATP-binding component K01996 livF; branched-chain amino acid transport system ATP-binding protein D BBDE_0662 putative lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D BBDE_0674 metal ion ABC transporter substrate binding component K02073 metQ; D-methionine transport system substrate-binding protein D BBDE_1322 putative metal ABC transporter substrate binding component K02073 metQ; D-methionine transport system substrate-binding protein D BBDE_0665 putative ABC transporter permease component K02072 metI; D-methionine transport system permease protein D BBDE_0673 metal ion ABC transporter permease component K02072 metI; D-methionine transport system permease protein D BBDE_1320 putative metal ABC transporter permease component K02072 metI; D-methionine transport system permease protein D BBDE_0663 putative ABC transporter ATP-binding component K02071 metN; D-methionine transport system ATP-binding protein D BBDE_0672 metal ion ABC transporter ATP-binding component K02071 metN; D-methionine transport system ATP-binding protein D BBDE_1321 putative metal ABC transporter ATP-binding component K02071 metN; D-methionine transport system ATP-binding protein D BBDE_1418 dipeptide ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein D BBDE_1419 conserved hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein D BBDE_0762 putative ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein D BBDE_1417 dipeptide ABC transporter permease component K15581 oppB; oligopeptide transport system permease protein D BBDE_1416 dipeptide ABC transporter permease component K15582 oppC; oligopeptide transport system permease protein D BBDE_1415 dipeptide ABC transporter ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein D BBDE_1776 conserved hypothetical protein K09815 znuA; zinc transport system substrate-binding protein D BBDE_0341 conserved hypothetical protein K03523 bioY; biotin transport system substrate-specific component D BBDE_1272 ABC transporter ATP-binding component K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D BBDE_0778 cobalt ABC transporter permease component K16785 ecfT; energy-coupling factor transport system permease protein D BBDE_1264 ABC transporter permease component K16785 ecfT; energy-coupling factor transport system permease protein D BBDE_0614 cell division protein K09811 ftsX; cell division transport system permease protein D BBDE_0613 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D BBDE_0482 conserved hypothetical protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D BBDE_0481 conserved hypothetical protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D BBDE_1988 ABC transporter ATP-binding and permease components K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D BBDE_1987 ABC transporter ATP-binding and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D BBDE_1569 ABC transporter ATP-binding component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D BBDE_0142 putative ABC transporter ATP-binding and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D BBDE_1568 ABC transporter ATP-binding component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D BBDE_0143 putative ABC transporter ATP-binding and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D BBDE_1808 ABC transporter ATP-binding component K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD C 02060 Phosphotransferase system (PTS) [PATH:bdn02060] D BBDE_0242 putative PTS system enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D BBDE_0241 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D BBDE_0460 PTS system glucose-specific IIABC components K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:bdn03070] D BBDE_0334 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D BBDE_1090 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D BBDE_0430 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D BBDE_1120 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC D BBDE_2139 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D BBDE_1351 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BBDE_0175 signal recognition particle-docking protein K03110 ftsY; fused signal recognition particle receptor D BBDE_0300 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:bdn02020] D BBDE_2050 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D BBDE_0367 two-component sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D BBDE_0495 two-component sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D BBDE_0368 two-component response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3 D BBDE_0369 phosphate ABC transporter substrate binding component K02040 pstS; phosphate transport system substrate-binding protein D BBDE_0052 putative protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D BBDE_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D BBDE_0807 conserved hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D BBDE_0199 conserved hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D BBDE_0200 conserved hypothetical protein K12510 tadB; tight adherence protein B D BBDE_0179 uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D BBDE_0178 nitrogen regulatory protein K04751 glnB; nitrogen regulatory protein P-II 1 D BBDE_1249 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BBDE_1485 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BBDE_1705 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D BBDE_1792 conserved hypothetical protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D BBDE_0505 phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D BBDE_2017 putative cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D BBDE_2018 putative cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:bdn02024] D BBDE_0645 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D BBDE_1139 anthranilate synthase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D BBDE_0363 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D BBDE_0364 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D BBDE_1657 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D BBDE_1658 conserved hypothetical protein K20265 gadC; glutamate:GABA antiporter D BBDE_0271 ABC transporter substrate binding component K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D BBDE_2007 putative ABC transporter substrate binding component K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D BBDE_0273 ABC transporter permease component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D BBDE_2004 putative ABC transporter permease component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D BBDE_0272 ABC transporter permease component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D BBDE_2006 putative truncated ABC transporter permease component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D BBDE_0274 ABC transporter ATP-binding component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D BBDE_2008 putative ABC transporter ATP-binding component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D BBDE_0577 branched-chain amino acid ABC transporter substrate binding component K01999 livK; branched-chain amino acid transport system substrate-binding protein D BBDE_0091 putative ABC transporter substrate binding component K01999 livK; branched-chain amino acid transport system substrate-binding protein D BBDE_0090 putative ABC transporter substrate binding component K01999 livK; branched-chain amino acid transport system substrate-binding protein D BBDE_0578 branched-chain amino acid ABC transporter permease component K01997 livH; branched-chain amino acid transport system permease protein D BBDE_0086 putative ABC transporter permease component K01997 livH; branched-chain amino acid transport system permease protein D BBDE_0579 branched-chain amino acid ABC transporter permease component K01998 livM; branched-chain amino acid transport system permease protein D BBDE_0087 putative ABC transporter permease component K01998 livM; branched-chain amino acid transport system permease protein D BBDE_0580 branched-chain amino acid ABC transporter ATP-binding component K01995 livG; branched-chain amino acid transport system ATP-binding protein D BBDE_0088 putative ABC transporter ATP-binding component K01995 livG; branched-chain amino acid transport system ATP-binding protein D BBDE_0089 putative ABC transporter ATP-binding component K01996 livF; branched-chain amino acid transport system ATP-binding protein D BBDE_0581 branched-chain amino acid ABC transporter ATP-binding component K01996 livF; branched-chain amino acid transport system ATP-binding protein D BBDE_1678 putative adhesin K20276 bapA; large repetitive protein D BBDE_1149 putative long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BBDE_1154 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BBDE_1003 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BBDE_1809 putative long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BBDE_1705 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D BBDE_1360 glycosyl hydrolase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D BBDE_1997 glycoside hydrolase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D BBDE_0653 conserved hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D BBDE_1418 dipeptide ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein D BBDE_1419 conserved hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein D BBDE_0762 putative ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein D BBDE_1417 dipeptide ABC transporter permease component K15581 oppB; oligopeptide transport system permease protein D BBDE_1416 dipeptide ABC transporter permease component K15582 oppC; oligopeptide transport system permease protein D BBDE_1415 dipeptide ABC transporter ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein D BBDE_0636 peptides ABC transporter substrate binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BBDE_1455 ABC transporter substrate binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BBDE_1861 ABC transporter substrate binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BBDE_0637 peptides ABC transporter substrate binding component K02033 ABC.PE.P; peptide/nickel transport system permease protein D BBDE_1454 ABC transporter permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D BBDE_0638 peptides ABC transporter permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BBDE_1453 ABC transporter permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BBDE_1452 ABC transporter ATP-binding component K02031 ddpD; peptide/nickel transport system ATP-binding protein D BBDE_0639 peptides ABC transporter ATP-binding component K02031 ddpD; peptide/nickel transport system ATP-binding protein D BBDE_0640 peptides ABC transporter ATP-binding component K02032 ddpF; peptide/nickel transport system ATP-binding protein D BBDE_2139 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D BBDE_0334 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D BBDE_1090 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D BBDE_0430 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D BBDE_1120 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC D BBDE_1351 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BBDE_0175 signal recognition particle-docking protein K03110 ftsY; fused signal recognition particle receptor D BBDE_0300 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D BBDE_0162 ribose ABC transporter substrate binding component K10439 rbsB; ribose transport system substrate-binding protein D BBDE_1971 sugar ABC transporter substrate binding component K10439 rbsB; ribose transport system substrate-binding protein C 02040 Flagellar assembly [PATH:bdn02040] D BBDE_0669 putative amino acid ABC transporter substrate binding component K02424 tcyA; L-cystine transport system substrate-binding protein D BBDE_1344 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D BBDE_0830 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:bdn01501] D BBDE_1418 dipeptide ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein D BBDE_1419 conserved hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein D BBDE_0762 putative ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein D BBDE_1417 dipeptide ABC transporter permease component K15581 oppB; oligopeptide transport system permease protein D BBDE_1416 dipeptide ABC transporter permease component K15582 oppC; oligopeptide transport system permease protein D BBDE_1415 dipeptide ABC transporter ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein D BBDE_1469 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:bdn01502] D BBDE_0270 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BBDE_0648 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D BBDE_1467 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D BBDE_1466 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D BBDE_1463 N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bdn01503] D BBDE_1331 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D BBDE_0807 conserved hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:bdn01000] C 01001 Protein kinases [BR:bdn01001] D BBDE_1347 putative serine-threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D BBDE_0035 putative serine-threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D BBDE_0036 putative serine-threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D BBDE_1771 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D BBDE_1754 putative lipopolysaccharide biosynthesis protein K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D BBDE_1758 putative lipopolysaccharide biosynthesis protein K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D BBDE_0367 two-component sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D BBDE_0495 two-component sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D BBDE_0743 two-component sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D BBDE_0260 hypothetical protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D BBDE_0840 two-component sensor kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:bdn01009] D BBDE_0452 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D BBDE_0039 putative phosphoprotein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D BBDE_1682 putative phosphoprotein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D BBDE_0718 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:bdn01002] D BBDE_1508 putative lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D BBDE_0981 conserved hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D BBDE_0362 aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D BBDE_1281 aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D BBDE_0360 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D BBDE_0962 GMP synthase/glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D BBDE_0302 putative amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D BBDE_1054 putative peptidase K07010 K07010; putative glutamine amidotransferase D BBDE_0615 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D BBDE_0500 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D BBDE_0499 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D BBDE_0690 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D BBDE_1032 glutamate synthase alpha subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D BBDE_0622 D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D BBDE_1437 asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D BBDE_1060 choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] D BBDE_0185 putative sortase K07284 srtA; sortase A [EC:3.4.22.70] D BBDE_0512 putative sortase K07284 srtA; sortase A [EC:3.4.22.70] D BBDE_1260 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70] D BBDE_1885 conserved hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70] D BBDE_2057 putative sortase K07284 srtA; sortase A [EC:3.4.22.70] D BBDE_1168 putative sortase K07284 srtA; sortase A [EC:3.4.22.70] D BBDE_1773 conserved hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70] D BBDE_0132 putative sortase K07284 srtA; sortase A [EC:3.4.22.70] D BBDE_0265 putative sortase K07284 srtA; sortase A [EC:3.4.22.70] D BBDE_0033 putative sortase K07284 srtA; sortase A [EC:3.4.22.70] D BBDE_0244 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D BBDE_1304 hypothetical protein K07052 K07052; CAAX protease family protein D BBDE_0275 conserved hypothetical protein K07052 K07052; CAAX protease family protein D BBDE_0946 conserved hypothetical protein K07052 K07052; CAAX protease family protein D BBDE_1661 aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D BBDE_0605 peptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D BBDE_0327 dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D BBDE_0607 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D BBDE_1450 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D BBDE_0523 zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D BBDE_0059 putative protease K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D BBDE_0052 putative protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D BBDE_0042 putative dipeptidyl peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D BBDE_1709 protease K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D BBDE_0520 conserved hypothetical protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D BBDE_0763 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D BBDE_0764 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D BBDE_1540 conserved hypothetical protein K07177 K07177; Lon-like protease D BBDE_1477 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D BBDE_0322 putative signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D BBDE_0808 putative peptidase K05995 pepE; dipeptidase E [EC:3.4.13.21] D BBDE_0561 hypothetical phage protein K06904 GP4; Escherichia/Staphylococcus phage prohead protease D BBDE_0357 putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-] C 01003 Glycosyltransferases [BR:bdn01003] D BBDE_1701 putative glycosyl transferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D BBDE_1996 glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D BBDE_1125 glycosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345] D BBDE_0697 putative glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D BBDE_1035 putative glycosyltransferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D BBDE_0583 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D BBDE_1923 putative glycosyltransferase K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287] D BBDE_1924 conserved hypothetical protein K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288] D BBDE_1934 conserved hypothetical protein K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288] C 01005 Lipopolysaccharide biosynthesis proteins [BR:bdn01005] D BBDE_1763 putative rhamnosyltransferase K12996 rgpA; rhamnosyltransferase [EC:2.4.1.-] D BBDE_1726 conserved hypothetical protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D BBDE_1939 conserved hypothetical protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D BBDE_0583 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bdn01011] D BBDE_0262 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BBDE_0390 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D BBDE_1462 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D BBDE_1465 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D BBDE_1445 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BBDE_1446 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BBDE_0270 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BBDE_0648 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D BBDE_1548 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D BBDE_1466 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D BBDE_1463 N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D BBDE_1098 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D BBDE_2132 conserved hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase D BBDE_1469 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D BBDE_0037 putative penicillin binding protein transpeptidase K05364 pbpA; penicillin-binding protein A D BBDE_0520 conserved hypothetical protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D BBDE_0615 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D BBDE_0500 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D BBDE_0499 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D BBDE_0185 putative sortase K07284 srtA; sortase A [EC:3.4.22.70] D BBDE_0512 putative sortase K07284 srtA; sortase A [EC:3.4.22.70] D BBDE_1260 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70] D BBDE_1885 conserved hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70] D BBDE_2057 putative sortase K07284 srtA; sortase A [EC:3.4.22.70] D BBDE_1168 putative sortase K07284 srtA; sortase A [EC:3.4.22.70] D BBDE_1773 conserved hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70] D BBDE_0132 putative sortase K07284 srtA; sortase A [EC:3.4.22.70] D BBDE_0265 putative sortase K07284 srtA; sortase A [EC:3.4.22.70] D BBDE_0033 putative sortase K07284 srtA; sortase A [EC:3.4.22.70] D BBDE_0980 conserved hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] C 01004 Lipid biosynthesis proteins [BR:bdn01004] D BBDE_0344 fatty acid synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D BBDE_0528 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D BBDE_1149 putative long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BBDE_1154 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BBDE_1003 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BBDE_1809 putative long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BBDE_1348 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:bdn01008] D BBDE_1448 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:bdn01006] D BBDE_1346 isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D BBDE_1531 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D BBDE_1362 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D BBDE_0491 putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:bdn01007] D BBDE_0252 glutamyl-tRNA synthase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BBDE_1888 putative tRNA synthase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D BBDE_1226 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BBDE_0024 tryptophanyl-tRNA synthase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D BBDE_0301 cysteinyl-tRNA synthase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D BBDE_1822 arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BBDE_1992 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BBDE_1561 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D BBDE_1862 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D BBDE_1164 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BBDE_0488 lysyl-tRNA synthase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D BBDE_0751 aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BBDE_0750 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D BBDE_1514 glycyl-tRNA synthase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BBDE_0463 seryl-tRNA synthase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D BBDE_0603 prolyl-tRNA synthase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D BBDE_1128 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D BBDE_0978 alanyl-tRNA synthase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D BBDE_1240 phenylalanyl-tRNA synthase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D BBDE_1239 phenylalanyl-tRNA synthase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D BBDE_0333 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D BBDE_0281 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D BBDE_1092 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D BBDE_0666 aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117] D BBDE_2116 aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-] D BBDE_1503 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BBDE_0046 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BBDE_1234 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D BBDE_1020 conserved hypothetical protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D BBDE_2012 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D BBDE_1027 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D BBDE_0498 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:bdn00194] D BBDE_1842 ATP synthase epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D BBDE_1843 ATP synthase beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D BBDE_1844 ATP synthase gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D BBDE_1845 ATP synthase alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D BBDE_1846 ATP synthase delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D BBDE_1847 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D BBDE_1848 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D BBDE_1849 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:bdn03000] D BBDE_1406 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BBDE_0214 putative transcriptional regulator K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein D BBDE_0356 hypothetical protein K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA D BBDE_0147 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BBDE_0158 conserved hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BBDE_0159 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BBDE_0240 putative transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BBDE_0537 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BBDE_1564 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BBDE_1908 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BBDE_1521 putative transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BBDE_1616 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BBDE_1811 putative transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BBDE_1975 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BBDE_0009 putative transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D BBDE_1600 transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D BBDE_0119 transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D BBDE_2055 transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D BBDE_2038 putative transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D BBDE_0092 transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D BBDE_0475 putative transcriptional regulator K03710 K03710; GntR family transcriptional regulator D BBDE_2114 putative transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D BBDE_1596 putative transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D BBDE_1865 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D BBDE_2046 putative transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D BBDE_1516 transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator D BBDE_0686 putative metal uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D BBDE_1705 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D BBDE_0340 conserved hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D BBDE_1316 hypothetical protein K02647 cdaR; carbohydrate diacid regulator D BBDE_1339 putative transcriptional regulator K07727 K07727; putative transcriptional regulator D BBDE_1552 conserved hypothetical protein K07729 K07729; putative transcriptional regulator D BBDE_0841 transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D BBDE_0845 putative transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D BBDE_1799 hypothetical protein K18956 whiB5; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D BBDE_1667 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D BBDE_1019 conserved hypothetical protein K23253 putR; PucR family transcriptional regulator, proline-responsive transcriptional activator D BBDE_2135 putative chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BBDE_0854 putative transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D BBDE_1232 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D BBDE_1095 heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor D BBDE_1279 transcriptional activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D BBDE_2010 truncated conserved hypothetical protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D BBDE_0586 hypothetical protein K07733 alpA; prophage regulatory protein D BBDE_1475 conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR D BBDE_1472 conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:bdn03021] D BBDE_0436 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D BBDE_1687 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D BBDE_1686 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D BBDE_0713 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D BBDE_1344 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D BBDE_1444 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D BBDE_0442 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D BBDE_0705 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D BBDE_0335 putative transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG D BBDE_0838 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D BBDE_1867 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:bdn03019] D BBDE_0328 ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D BBDE_0306 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D BBDE_1662 conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D BBDE_0599 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D BBDE_0644 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D BBDE_0830 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BBDE_0349 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D BBDE_1867 transcription termination factor Rho K03628 rho; transcription termination factor Rho D BBDE_2049 chaperone DnaK K04043 dnaK; molecular chaperone DnaK D BBDE_0739 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BBDE_0193 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D BBDE_2129 putative RNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D BBDE_1084 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ D BBDE_1107 putative helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] D BBDE_1482 ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:bdn03011] D BBDE_0860 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D BBDE_1147 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D BBDE_0416 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D BBDE_0973 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D BBDE_0427 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D BBDE_1903 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D BBDE_0701 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D BBDE_0424 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D BBDE_0402 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D BBDE_0409 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D BBDE_0435 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D BBDE_0700 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D BBDE_0434 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D BBDE_0423 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D BBDE_1779 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D BBDE_0348 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D BBDE_0298 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D BBDE_0419 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D BBDE_1901 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D BBDE_0414 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D BBDE_1029 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D BBDE_0337 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D BBDE_0413 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D BBDE_0410 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D BBDE_0411 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D BBDE_0422 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D BBDE_0425 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D BBDE_1900 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D BBDE_0376 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D BBDE_0336 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D BBDE_0377 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D BBDE_0401 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D BBDE_0420 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D BBDE_0429 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D BBDE_0417 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D BBDE_0437 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D BBDE_0426 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D BBDE_0321 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D BBDE_1434 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D BBDE_0329 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D BBDE_0415 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D BBDE_0412 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D BBDE_0421 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D BBDE_0330 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D BBDE_1781 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D BBDE_0291 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D BBDE_0418 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D BBDE_0428 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D BBDE_0574 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D BBDE_1777 putative 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D BBDE_0307 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D BBDE_0389 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D BBDE_1780 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D BBDE_2141 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D BBDE_1435 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D BBDE_1778 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D BBDE_0433 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D BBDE_1026 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D BBDE_5SrRNA02 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BBDE_5SrRNA03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BBDE_5SrRNA04 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BBDE_5SrRNA01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BBDE_16SrRNA04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BBDE_16SrRNA02 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BBDE_16SrRNA03 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BBDE_16SrRNA01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BBDE_23SrRNA02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BBDE_23SrRNA03 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BBDE_23SrRNA04 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BBDE_23SrRNA01 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:bdn03009] D BBDE_0306 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D BBDE_0599 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D BBDE_1001 GTP-binding protein K03595 era; GTPase D BBDE_0331 GTPase K03979 obgE; GTPase [EC:3.6.5.-] D BBDE_0442 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D BBDE_0705 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D BBDE_0335 putative transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG D BBDE_2126 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D BBDE_1481 conserved hypothetical protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D BBDE_0293 putative methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D BBDE_0996 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D BBDE_2137 glucose-inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D BBDE_1471 S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D BBDE_1995 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D BBDE_1222 conserved hypothetical protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D BBDE_2102 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D BBDE_0609 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D BBDE_1142 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D BBDE_0623 putative ribosomal pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D BBDE_1113 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D BBDE_1507 conserved hypothetical protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D BBDE_1158 putative ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D BBDE_0296 putative 16S rRNA-processing protein K02860 rimM; 16S rRNA processing protein RimM D BBDE_0328 ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D BBDE_0979 putative endonuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D BBDE_1112 GTP-binding protein K03977 engA; GTPase D BBDE_1480 GTP-binding protein K03665 hflX; GTPase D BBDE_0582 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D BBDE_1332 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D BBDE_0444 ribosome-binding factor K02834 rbfA; ribosome-binding factor A D BBDE_1175 conserved hypothetical protein K09710 ybeB; ribosome-associated protein D BBDE_0999 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor D BBDE_1278 conserved hypothetical protein K07574 yhbY; RNA-binding protein D BBDE_0786 GTPase K06942 ychF; ribosome-binding ATPase D BBDE_0308 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:bdn03016] D BBDE_0252 glutamyl-tRNA synthase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BBDE_0603 prolyl-tRNA synthase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D BBDE_1561 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D BBDE_1164 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BBDE_1992 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BBDE_1822 arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BBDE_0488 lysyl-tRNA synthase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D BBDE_0751 aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BBDE_0978 alanyl-tRNA synthase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D BBDE_1514 glycyl-tRNA synthase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BBDE_1128 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D BBDE_0463 seryl-tRNA synthase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D BBDE_0301 cysteinyl-tRNA synthase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D BBDE_1862 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D BBDE_0750 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D BBDE_1240 phenylalanyl-tRNA synthase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D BBDE_1239 phenylalanyl-tRNA synthase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D BBDE_1226 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BBDE_0024 tryptophanyl-tRNA synthase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D BBDE_1288 D-tyrosyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D BBDE_1295 D-tyrosyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D BBDE_0997 conserved hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D BBDE_1037 putative methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D BBDE_0509 conserved hypothetical protein K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D BBDE_0508 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D BBDE_0438 tRNA pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D BBDE_0445 tRNA pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D BBDE_0582 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D BBDE_1362 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D BBDE_2140 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D BBDE_0316 putative ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D BBDE_1310 putative exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5] D BBDE_1888 putative tRNA synthase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D BBDE_1440 conserved hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D BBDE_2096 putative cytidine/deoxycytidine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D BBDE_1363 conserved hypothetical protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D BBDE_0294 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D BBDE_1690 putative RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D BBDE_1241 putative rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family D BBDE_0623 putative ribosomal pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D BBDE_0051 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D BBDE_0521 conserved hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D BBDE_1159 conserved hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D BBDE_1157 metalloendopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D BBDE_1160 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D BBDE_0349 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:bdn03012] D BBDE_0443 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D BBDE_1436 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D BBDE_1146 elongation factor Ts K02357 tsf; elongation factor Ts D BBDE_0703 elongation factor Tu K02358 tuf; elongation factor Tu D BBDE_0702 elongation factor G K02355 fusA; elongation factor G D BBDE_0575 peptide chain release factor K02835 prfA; peptide chain release factor 1 D BBDE_1144 ribosome recycling factor K02838 frr; ribosome recycling factor D BBDE_0576 putative methylase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D BBDE_0828 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D BBDE_0432 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D BBDE_0704 elongation factor P K02356 efp; elongation factor P D BBDE_0612 peptide chain release factor K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:bdn03110] D BBDE_1880 Clp protease K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D BBDE_0747 Clp protease K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D BBDE_0765 ATP-dependent Clp protease ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D BBDE_2049 chaperone DnaK K04043 dnaK; molecular chaperone DnaK D BBDE_0739 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BBDE_1096 chaperone protein K03686 dnaJ; molecular chaperone DnaJ D BBDE_2047 chaperone K03686 dnaJ; molecular chaperone DnaJ D BBDE_2048 chaperone GrpE K03687 GRPE; molecular chaperone GrpE D BBDE_0387 co-chaperonin GroES K04078 groES; chaperonin GroES D BBDE_0523 zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D BBDE_1849 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D BBDE_1331 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D BBDE_1716 thioredoxin K03671 TXN; thioredoxin D BBDE_1826 conserved hypothetical protein K05838 ybbN; putative thioredoxin C 04131 Membrane trafficking [BR:bdn04131] D BBDE_1439 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BBDE_0492 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BBDE_1167 putative phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BBDE_0864 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BBDE_0289 conserved hypothetical protein K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:bdn04121] D BBDE_0722 conserved hypothetical protein K13570 pup; prokaryotic ubiquitin-like protein Pup C 03051 Proteasome [BR:bdn03051] D BBDE_0719 putative ATPase K13527 mpa; proteasome-associated ATPase D BBDE_0723 conserved hypothetical protein K13571 pafA; proteasome accessory factor A [EC:6.3.1.19] D BBDE_0720 conserved hypothetical protein K20814 dop; Pup amidohydrolase [EC:3.5.1.119] C 03032 DNA replication proteins [BR:bdn03032] D BBDE_0456 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D BBDE_1406 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BBDE_0726 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D BBDE_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D BBDE_0180 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D BBDE_1324 putative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D BBDE_0650 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D BBDE_0604 conserved hypothetical protein K03111 ssb; single-strand DNA-binding protein D BBDE_0896 hypothetical protein K03111 ssb; single-strand DNA-binding protein D BBDE_1902 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BBDE_1506 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BBDE_0002 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BBDE_1161 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BBDE_0239 DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BBDE_0895 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BBDE_1308 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BBDE_0216 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BBDE_0323 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D BBDE_1268 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D BBDE_0006 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D BBDE_1337 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D BBDE_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D BBDE_1343 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D BBDE_0237 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:bdn03036] D BBDE_1406 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BBDE_0306 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D BBDE_0726 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D BBDE_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D BBDE_0017 conserved hypothetical protein K04047 dps; starvation-inducible DNA-binding protein D BBDE_1865 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D BBDE_0613 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D BBDE_1469 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D BBDE_0842 conserved hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D BBDE_1359 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D BBDE_1461 cell division protein K03589 ftsQ; cell division protein FtsQ D BBDE_1464 putative cell division protein K03588 ftsW; cell division protein FtsW D BBDE_0614 cell division protein K09811 ftsX; cell division transport system permease protein D BBDE_1512 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BBDE_1511 conserved hypothetical protein K09772 sepF; cell division inhibitor SepF D BBDE_1432 conserved hypothetical protein K03496 parA; chromosome partitioning protein D BBDE_2136 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D BBDE_2135 putative chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BBDE_2137 glucose-inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D BBDE_1420 tyrosine recombinase K03733 xerC; integrase/recombinase XerC D BBDE_0573 putative phage integrase K03733 xerC; integrase/recombinase XerC D BBDE_1433 recombinase K04763 xerD; integrase/recombinase XerD D BBDE_1267 conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D BBDE_1361 cell division protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D BBDE_0876 conserved hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D BBDE_1085 conserved hypothetical protein K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:bdn03400] D BBDE_0816 conserved hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D BBDE_0737 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D BBDE_1550 conserved hypothetical protein K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D BBDE_1689 putative adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D BBDE_1860 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D BBDE_1626 conserved hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D BBDE_1431 conserved hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D BBDE_1333 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D BBDE_1414 putative exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D BBDE_1268 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D BBDE_1081 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D BBDE_0862 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D BBDE_1082 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D BBDE_0969 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BBDE_1542 putative DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BBDE_1672 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BBDE_1687 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D BBDE_1686 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D BBDE_0436 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D BBDE_0713 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D BBDE_0829 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D BBDE_1607 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D BBDE_1608 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D BBDE_1506 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BBDE_0002 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BBDE_1161 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BBDE_0239 DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BBDE_0895 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BBDE_1308 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BBDE_0216 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BBDE_0604 conserved hypothetical protein K03111 ssb; single-strand DNA-binding protein D BBDE_0896 hypothetical protein K03111 ssb; single-strand DNA-binding protein D BBDE_1902 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BBDE_1624 putative endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D BBDE_1354 recombinase RecA K03553 recA; recombination protein RecA D BBDE_1122 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D BBDE_1121 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D BBDE_1123 holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D BBDE_0715 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D BBDE_0453 DNA repair protein K04485 radA; DNA repair protein RadA/Sms D BBDE_0003 recombination protein RecF K03629 recF; DNA replication and repair protein RecF D BBDE_0292 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D BBDE_1532 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D BBDE_0217 recombination protein RecR K06187 recR; recombination protein RecR D BBDE_1218 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D BBDE_1555 CRISPR-associated protein K15342 cas1; CRISP-associated protein Cas1 D BBDE_1195 conserved hypothetical protein K15342 cas1; CRISP-associated protein Cas1 D BBDE_0006 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D BBDE_1337 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D BBDE_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D BBDE_1343 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D BBDE_0237 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D BBDE_0726 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D BBDE_0644 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D BBDE_0394 putative DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D BBDE_0691 conserved hypothetical protein K03502 umuC; DNA polymerase V D BBDE_1477 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D BBDE_1353 putative regulatory protein K03565 recX; regulatory protein D BBDE_1338 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D BBDE_0192 conserved hypothetical protein K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] C 03029 Mitochondrial biogenesis [BR:bdn03029] D BBDE_0443 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D BBDE_1436 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D BBDE_1146 elongation factor Ts K02357 tsf; elongation factor Ts D BBDE_0703 elongation factor Tu K02358 tuf; elongation factor Tu D BBDE_0702 elongation factor G K02355 fusA; elongation factor G D BBDE_1001 GTP-binding protein K03595 era; GTPase D BBDE_1226 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BBDE_1164 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BBDE_0751 aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BBDE_1514 glycyl-tRNA synthase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BBDE_1822 arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BBDE_1873 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D BBDE_1872 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D BBDE_1874 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D BBDE_0604 conserved hypothetical protein K03111 ssb; single-strand DNA-binding protein D BBDE_0896 hypothetical protein K03111 ssb; single-strand DNA-binding protein D BBDE_1902 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BBDE_2049 chaperone DnaK K04043 dnaK; molecular chaperone DnaK D BBDE_2048 chaperone GrpE K03687 GRPE; molecular chaperone GrpE D BBDE_0739 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BBDE_0387 co-chaperonin GroES K04078 groES; chaperonin GroES D BBDE_1096 chaperone protein K03686 dnaJ; molecular chaperone DnaJ D BBDE_2047 chaperone K03686 dnaJ; molecular chaperone DnaJ D BBDE_1267 conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D BBDE_2139 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:bdn02000] D BBDE_0482 conserved hypothetical protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D BBDE_0481 conserved hypothetical protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D BBDE_1988 ABC transporter ATP-binding and permease components K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D BBDE_1987 ABC transporter ATP-binding and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D BBDE_1569 ABC transporter ATP-binding component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D BBDE_0142 putative ABC transporter ATP-binding and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D BBDE_1568 ABC transporter ATP-binding component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D BBDE_0143 putative ABC transporter ATP-binding and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D BBDE_1808 ABC transporter ATP-binding component K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD D BBDE_0303 ABC transporter ATP-binding component K15738 uup; ABC transport system ATP-binding/permease protein D BBDE_0271 ABC transporter substrate binding component K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D BBDE_2007 putative ABC transporter substrate binding component K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D BBDE_0273 ABC transporter permease component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D BBDE_2004 putative ABC transporter permease component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D BBDE_0272 ABC transporter permease component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D BBDE_2006 putative truncated ABC transporter permease component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D BBDE_0274 ABC transporter ATP-binding component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D BBDE_2008 putative ABC transporter ATP-binding component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D BBDE_2112 putative nitrate/sulfonate/bicarbonate ABC transporter substrate binding component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D BBDE_1528 putative ABC transporter substrate binding component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D BBDE_2111 putative nitrate/sulfonate/bicarbonate ABC transporter permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D BBDE_2110 nitrate ABC transporter ATP-binding component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D BBDE_2104 ABC transporter ATP-binding component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D BBDE_2075 ABC transporter substrate binding component K25086 musE; maltose transport system substrate-binding protein D BBDE_0102 hypothetical protein K25086 musE; maltose transport system substrate-binding protein D BBDE_0103 putative ABC transporter permease component K25087 musF; maltose transport system permease protein D BBDE_2073 oligosaccharide ABC transporter permease component K25087 musF; maltose transport system permease protein D BBDE_0104 putative ABC transporter permease component K25088 musG; maltose transport system permease protein D BBDE_2072 oligosaccharide ABC transporter permease component K25088 musG; maltose transport system permease protein D BBDE_2067 putative ABC transporter substrate binding component K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D BBDE_2066 putative ABC transporter permease component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D BBDE_2065 putative ABC transporter permease component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D BBDE_0538 putative sugar ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BBDE_2043 putative ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BBDE_2093 sugar ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BBDE_0466 putative ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BBDE_2030 putative ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BBDE_0115 sugar ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D BBDE_0539 putative sugar ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BBDE_2042 putative ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BBDE_2092 sugar ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BBDE_0467 putative ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BBDE_2029 putative ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BBDE_0116 putative ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D BBDE_0540 putative sugar ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BBDE_2041 putative ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BBDE_2091 sugar ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BBDE_0468 putative ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BBDE_2028 putative ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BBDE_2033 putative ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D BBDE_0127 putative ABC transporter substrate binding component K10240 cebE; cellobiose transport system substrate-binding protein D BBDE_0128 putative ABC transporter permease component K10241 cebF; cellobiose transport system permease protein D BBDE_0129 putative ABC transporter permease component K10242 cebG; cellobiose transport system permease protein D BBDE_0228 putative ABC transporter substrate binding component K17318 lplA; putative aldouronate transport system substrate-binding protein D BBDE_1984 putative ABC transporter substrate binding component K17318 lplA; putative aldouronate transport system substrate-binding protein D BBDE_2000 putative ABC transporter substrate binding component K17318 lplA; putative aldouronate transport system substrate-binding protein D BBDE_2023 putative ABC transporter substrate binding component K17318 lplA; putative aldouronate transport system substrate-binding protein D BBDE_0229 putative ABC transporter permease component K17319 lplB; putative aldouronate transport system permease protein D BBDE_1983 ABC transporter permease component K17319 lplB; putative aldouronate transport system permease protein D BBDE_2025 putative ABC transporter permease component K17319 lplB; putative aldouronate transport system permease protein D BBDE_1982 ABC transporter permease component K17320 lplC; putative aldouronate transport system permease protein D BBDE_2024 putative ABC transporter permease component K17320 lplC; putative aldouronate transport system permease protein D BBDE_0230 putative ABC transporter permease component K17320 lplC; putative aldouronate transport system permease protein D BBDE_0543 putative ABC transporter substrate binding component K10546 chvE; putative multiple sugar transport system substrate-binding protein D BBDE_1951 putative sugar ABC transporter substrate binding component K10546 chvE; putative multiple sugar transport system substrate-binding protein D BBDE_0545 putative sugar ABC transporter permease component K10547 gguB; putative multiple sugar transport system permease protein D BBDE_1949 putative sugar ABC transporter permease component K10547 gguB; putative multiple sugar transport system permease protein D BBDE_0544 putative ABC transporter ATP-binding component K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D BBDE_1950 putative sugar ABC transporter ATP-binding component K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D BBDE_0162 ribose ABC transporter substrate binding component K10439 rbsB; ribose transport system substrate-binding protein D BBDE_1971 sugar ABC transporter substrate binding component K10439 rbsB; ribose transport system substrate-binding protein D BBDE_1972 sugar ABC transporter permease component K10440 rbsC; ribose transport system permease protein D BBDE_0161 ribose ABC transporter permease component K10440 rbsC; ribose transport system permease protein D BBDE_0160 ribose ABC transporter ATP-binding component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D BBDE_1973 sugar ABC transporter ATP-binding component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D BBDE_0803 ABC transporter permease component K02069 STAR2; UDP-glucose/iron transport system permease protein D BBDE_0804 ABC transporter ATP-binding component K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D BBDE_0632 sugar ABC transporter substrate binding component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D BBDE_0633 sugar ABC transporter substrate binding component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D BBDE_0911 ABC transporter substrate binding component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D BBDE_1209 sugar ABC transporter substrate binding component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D BBDE_2054 putative ABC transporter substrate binding component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D BBDE_1615 ABC transporter substrate binding component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D BBDE_1804 sugar ABC transporter substrate binding component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D BBDE_0628 ABC transporter permease component K02025 ABC.MS.P; multiple sugar transport system permease protein D BBDE_0910 sugar ABC transporter permease component K02025 ABC.MS.P; multiple sugar transport system permease protein D BBDE_1210 sugar ABC transporter permease component K02025 ABC.MS.P; multiple sugar transport system permease protein D BBDE_2053 putative ABC transporter permease component K02025 ABC.MS.P; multiple sugar transport system permease protein D BBDE_1614 ABC transporter permease component K02025 ABC.MS.P; multiple sugar transport system permease protein D BBDE_1803 sugar ABC transporter permease component K02025 ABC.MS.P; multiple sugar transport system permease protein D BBDE_0117 putative ABC transporter permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D BBDE_0629 putative ABC transporter permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D BBDE_0909 putative ABC transporter permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D BBDE_1211 ABC transporter permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D BBDE_2052 putative ABC transporter permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D BBDE_1613 ABC transporter permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D BBDE_1802 ABC transporter permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D BBDE_1953 putative sugar ABC transporter ATP-binding component K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D BBDE_0369 phosphate ABC transporter substrate binding component K02040 pstS; phosphate transport system substrate-binding protein D BBDE_0370 truncated phosphate ABC transporter permease component K02037 pstC; phosphate transport system permease protein D BBDE_0371 truncated phosphate ABC transporter permease component K02037 pstC; phosphate transport system permease protein D BBDE_0372 phosphate ABC transporter permease component K02038 pstA; phosphate transport system permease protein D BBDE_0373 phosphate ABC transporter ATP-binding component K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D BBDE_0752 glutamate ABC transporter substrate-binding and permease components K10036 glnH; glutamine transport system substrate-binding protein D BBDE_0753 glutamate ABC transporter ATP-binding component K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D BBDE_0755 glutamate ABC transporter substrate binding component K10005 gluB; glutamate transport system substrate-binding protein D BBDE_1165 ABC transporter substrate binding component K10005 gluB; glutamate transport system substrate-binding protein D BBDE_0756 glutamate ABC transporter permease component K10006 gluC; glutamate transport system permease protein D BBDE_0757 glutamate ABC transporter permease component K10007 gluD; glutamate transport system permease protein D BBDE_0754 glutamate ABC transporter ATP-binding component K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D BBDE_0669 putative amino acid ABC transporter substrate binding component K02424 tcyA; L-cystine transport system substrate-binding protein D BBDE_0670 putative amino acid ABC transporter permease component K10009 tcyB; L-cystine transport system permease protein D BBDE_0577 branched-chain amino acid ABC transporter substrate binding component K01999 livK; branched-chain amino acid transport system substrate-binding protein D BBDE_0091 putative ABC transporter substrate binding component K01999 livK; branched-chain amino acid transport system substrate-binding protein D BBDE_0090 putative ABC transporter substrate binding component K01999 livK; branched-chain amino acid transport system substrate-binding protein D BBDE_0578 branched-chain amino acid ABC transporter permease component K01997 livH; branched-chain amino acid transport system permease protein D BBDE_0086 putative ABC transporter permease component K01997 livH; branched-chain amino acid transport system permease protein D BBDE_0579 branched-chain amino acid ABC transporter permease component K01998 livM; branched-chain amino acid transport system permease protein D BBDE_0087 putative ABC transporter permease component K01998 livM; branched-chain amino acid transport system permease protein D BBDE_0580 branched-chain amino acid ABC transporter ATP-binding component K01995 livG; branched-chain amino acid transport system ATP-binding protein D BBDE_0088 putative ABC transporter ATP-binding component K01995 livG; branched-chain amino acid transport system ATP-binding protein D BBDE_0089 putative ABC transporter ATP-binding component K01996 livF; branched-chain amino acid transport system ATP-binding protein D BBDE_0581 branched-chain amino acid ABC transporter ATP-binding component K01996 livF; branched-chain amino acid transport system ATP-binding protein D BBDE_0662 putative lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D BBDE_0674 metal ion ABC transporter substrate binding component K02073 metQ; D-methionine transport system substrate-binding protein D BBDE_1322 putative metal ABC transporter substrate binding component K02073 metQ; D-methionine transport system substrate-binding protein D BBDE_0665 putative ABC transporter permease component K02072 metI; D-methionine transport system permease protein D BBDE_0673 metal ion ABC transporter permease component K02072 metI; D-methionine transport system permease protein D BBDE_1320 putative metal ABC transporter permease component K02072 metI; D-methionine transport system permease protein D BBDE_0663 putative ABC transporter ATP-binding component K02071 metN; D-methionine transport system ATP-binding protein D BBDE_0672 metal ion ABC transporter ATP-binding component K02071 metN; D-methionine transport system ATP-binding protein D BBDE_1321 putative metal ABC transporter ATP-binding component K02071 metN; D-methionine transport system ATP-binding protein D BBDE_0617 putative ABC transporter substrate binding component K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D BBDE_0618 putative ABC transporter substrate binding component K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D BBDE_0660 amino acid ABC transporter substrate binding component K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D BBDE_0449 amino acid ABC transporter substrate binding component K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D BBDE_0619 putative ABC transporter permease component K02029 ABC.PA.P; polar amino acid transport system permease protein D BBDE_0657 amino acid ABC transporter permease component K02029 ABC.PA.P; polar amino acid transport system permease protein D BBDE_0658 amino acid ABC transporter permease component K02029 ABC.PA.P; polar amino acid transport system permease protein D BBDE_0448 amino acid ABC transporter permease component K02029 ABC.PA.P; polar amino acid transport system permease protein D BBDE_0668 putative amino acid ABC transporter ATP-binding component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D BBDE_0620 putative ABC transporter ATP-binding component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D BBDE_0447 amino acid ABC transporter ATP-binding component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D BBDE_0659 amino acid ABC transporter ATP-binding component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D BBDE_1418 dipeptide ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein D BBDE_1419 conserved hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein D BBDE_0762 putative ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein D BBDE_1417 dipeptide ABC transporter permease component K15581 oppB; oligopeptide transport system permease protein D BBDE_1416 dipeptide ABC transporter permease component K15582 oppC; oligopeptide transport system permease protein D BBDE_1415 dipeptide ABC transporter ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein D BBDE_0636 peptides ABC transporter substrate binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BBDE_1455 ABC transporter substrate binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BBDE_1861 ABC transporter substrate binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BBDE_0637 peptides ABC transporter substrate binding component K02033 ABC.PE.P; peptide/nickel transport system permease protein D BBDE_1454 ABC transporter permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D BBDE_0638 peptides ABC transporter permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BBDE_1453 ABC transporter permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BBDE_1452 ABC transporter ATP-binding component K02031 ddpD; peptide/nickel transport system ATP-binding protein D BBDE_0639 peptides ABC transporter ATP-binding component K02031 ddpD; peptide/nickel transport system ATP-binding protein D BBDE_0640 peptides ABC transporter ATP-binding component K02032 ddpF; peptide/nickel transport system ATP-binding protein D BBDE_1036 ABC transporter ATP-binding component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D BBDE_1776 conserved hypothetical protein K09815 znuA; zinc transport system substrate-binding protein D BBDE_0341 conserved hypothetical protein K03523 bioY; biotin transport system substrate-specific component D BBDE_1272 ABC transporter ATP-binding component K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D BBDE_0778 cobalt ABC transporter permease component K16785 ecfT; energy-coupling factor transport system permease protein D BBDE_1264 ABC transporter permease component K16785 ecfT; energy-coupling factor transport system permease protein D BBDE_0777 ABC transporter ATP-binding component K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D BBDE_1265 ABC transporter ATP-binding component K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D BBDE_1276 ABC transporter ATP-binding component K24040 ecfTA; energy-coupling factor transport system permease/ATP-binding protein [EC:7.-.-.-] D BBDE_1266 conserved hypothetical protein K16925 ykoE; energy-coupling factor transport system permease protein D BBDE_0374 conserved hypothetical protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D BBDE_0858 ABC transporter substrate binding component K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D BBDE_0856 ABC transporter permease component K02075 ABC.ZM.P; zinc/manganese transport system permease protein D BBDE_0857 ABC transporter ATP-binding component K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D BBDE_1373 conserved hypothetical protein K25142 lnrN; linearmycin/streptolysin S transport system permease protein D BBDE_1372 conserved hypothetical protein K25143 lnrM; linearmycin/streptolysin S transport system permease protein D BBDE_1371 putative ABC transporter ATP-binding component K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein D BBDE_0614 cell division protein K09811 ftsX; cell division transport system permease protein D BBDE_0613 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D BBDE_0519 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D BBDE_1929 ABC transporter permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D BBDE_0518 ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BBDE_1897 putative ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BBDE_1928 ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BBDE_1835 ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BBDE_0154 ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein D BBDE_0155 ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein D BBDE_1057 putative ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein D BBDE_1242 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D BBDE_1422 putative ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein D BBDE_0781 putative transport protein K02004 ABC.CD.P; putative ABC transport system permease protein D BBDE_0971 putative ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein D BBDE_1015 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D BBDE_1787 ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein D BBDE_1788 ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein D BBDE_0130 ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein D BBDE_1960 putative ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein D BBDE_0156 ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BBDE_0324 ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BBDE_1056 putative ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BBDE_1059 ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BBDE_1243 ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BBDE_1421 putative ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BBDE_0679 ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BBDE_0780 putative ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BBDE_0972 putative ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BBDE_1014 putative ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BBDE_1786 ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BBDE_1961 putative ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BBDE_0990 putative ABC transporter ATP-binding component K09013 sufC; Fe-S cluster assembly ATP-binding protein D BBDE_1376 conserved hypothetical protein K26937 dinF; MATE family, multidrug efflux pump D BBDE_1674 putative multidrug transport protein K26937 dinF; MATE family, multidrug efflux pump D BBDE_1285 putative multidrug transport protein K26937 dinF; MATE family, multidrug efflux pump D BBDE_1011 conserved hypothetical protein K26937 dinF; MATE family, multidrug efflux pump D BBDE_0378 conserved hypothetical protein K26937 dinF; MATE family, multidrug efflux pump D BBDE_1257 sugar transport protein K08139 HXT; MFS transporter, SP family, sugar:H+ symporter D BBDE_0148 putative transport protein K06610 iolF; MFS transporter, SP family, inositol transporter D BBDE_1522 galactoside transport protein K02532 lacY; MFS transporter, OHS family, lactose permease D BBDE_1620 L-fucose transport protein K02429 fucP; MFS transporter, FHS family, L-fucose permease D BBDE_1576 putative transport protein K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D BBDE_1664 putative transport protein K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D BBDE_0483 conserved hypothetical protein K08156 araJ; MFS transporter, DHA1 family, arabinose polymer utilization protein D BBDE_1483 putative transport protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D BBDE_1906 putative transport protein K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter D BBDE_1580 putative transport protein K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D BBDE_1693 putative transport protein K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D BBDE_0289 conserved hypothetical protein K06902 UMF1; MFS transporter, UMF1 family D BBDE_1430 transport protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D BBDE_0242 putative PTS system enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D BBDE_0241 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D BBDE_0460 PTS system glucose-specific IIABC components K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D BBDE_1114 conserved hypothetical protein K06188 aqpZ; aquaporin Z D BBDE_1890 glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator D BBDE_1284 potassium transport protein K10716 kch; voltage-gated potassium channel D BBDE_0177 putative ammonium ion transport protein K03320 amt; ammonium transporter, Amt family D BBDE_0732 conserved hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D BBDE_0733 conserved hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D BBDE_0015 large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D BBDE_1166 putative magnesium and cobalt transport protein K03284 corA; magnesium transporter D BBDE_1017 conserved hypothetical protein K06199 crcB; fluoride exporter D BBDE_1018 conserved hypothetical protein K06199 crcB; fluoride exporter D BBDE_0085 conserved hypothetical protein K06199 crcB; fluoride exporter D BBDE_0018 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D BBDE_1000 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D BBDE_0133 putative cell surface protein K21449 ata; trimeric autotransporter adhesin D BBDE_0167 conserved hypothetical protein K21449 ata; trimeric autotransporter adhesin D BBDE_0186 putative cell surface protein K21449 ata; trimeric autotransporter adhesin D BBDE_1884 putative cell surface protein K21449 ata; trimeric autotransporter adhesin D BBDE_2060 putative cell surface protein K21449 ata; trimeric autotransporter adhesin D BBDE_1562 galactoside transport protein K16209 lacS; lactose/raffinose/galactose permease D BBDE_1966 conserved hypothetical protein K16210 togT; oligogalacturonide transporter D BBDE_0055 putative transport protein K11738 ansP; L-asparagine permease D BBDE_1823 amino acid transport protein K16235 mmuP; S-methylmethionine transporter D BBDE_0473 putative transport protein K16238 eat; ethanolamine permease D BBDE_1658 conserved hypothetical protein K20265 gadC; glutamate:GABA antiporter D BBDE_1478 putative cation efflux protein K16264 czcD; cobalt-zinc-cadmium efflux system protein D BBDE_0395 conserved hypothetical protein K11939 rhtA; inner membrane transporter RhtA D BBDE_0653 conserved hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D BBDE_1315 putative transport protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family D BBDE_1602 gluconate transport protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family D BBDE_0283 gluconate transport protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family D BBDE_0023 putative sodium/proline symporter K11928 putP; sodium/proline symporter D BBDE_0624 putative sodium:dicarboxylate symporter K07862 sstT; serine/threonine transporter D BBDE_0766 putative Na+/H+ antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family D BBDE_2097 putative Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D BBDE_0176 putative Na+/H+ antiporter K26730 napA; Na+:H+ antiporter D BBDE_1220 cation transport protein K03498 trkH; trk/ktr system potassium uptake protein D BBDE_1221 potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D BBDE_0375 putative transport protein K06901 pbuG; adenine/guanine/hypoxanthine permease D BBDE_0083 putative voltage gated channel protein K03281 clcA; chloride channel protein, CIC family D BBDE_2108 conserved hypothetical protein K03281 clcA; chloride channel protein, CIC family D BBDE_1795 manganese transport protein K03322 mntH; manganese transport protein D BBDE_2132 conserved hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase D BBDE_0326 putative transport protein K13936 mdcF; malonate transporter and related proteins D BBDE_1852 putative transport protein K13936 mdcF; malonate transporter and related proteins D BBDE_0318 conserved hypothetical protein K24180 mleP; malate permease and related proteins D BBDE_1964 potassium transport protein K03549 kup; KUP system potassium uptake protein D BBDE_0353 L-lysine transport protein K06895 lysE; L-lysine exporter family protein LysE/ArgO D BBDE_0822 branched-chain amino acid transport protein K26605 azlC; branched chain amino acid efflux pump D BBDE_0823 branched-chain amino acid transport protein K26606 azlD; branched chain amino acid efflux pump D BBDE_1275 conserved hypothetical protein K23675 fmnP; riboflavin transporter D BBDE_1464 putative cell division protein K03588 ftsW; cell division protein FtsW D BBDE_1857 conserved hypothetical protein K23242 mntP; manganese efflux pump family protein D BBDE_0151 conserved hypothetical protein K07243 FTR; high-affinity iron transporter D BBDE_0152 conserved hypothetical protein K07230 p19; periplasmic iron binding protein D BBDE_0924 conserved hypothetical protein K03646 tolA; colicin import membrane protein D BBDE_1754 putative lipopolysaccharide biosynthesis protein K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D BBDE_1758 putative lipopolysaccharide biosynthesis protein K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D BBDE_2071 conserved hypothetical protein K25089 musI; membrane protein C 02044 Secretion system [BR:bdn02044] D BBDE_0981 conserved hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D BBDE_0199 conserved hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D BBDE_0200 conserved hypothetical protein K12510 tadB; tight adherence protein B D BBDE_1510 conserved hypothetical protein K02221 yggT; YggT family protein D BBDE_1163 conserved hypothetical protein K02237 comEA; competence protein ComEA D BBDE_1162 conserved hypothetical protein K02238 comEC; competence protein ComEC D BBDE_1498 hypothetical protein K27085 eccB; ESX secretion system ATPase EccB D BBDE_1486 putative cell division protein K27086 eccC; ESX secretion system protein EccC D BBDE_1497 hypothetical protein K27087 eccD; ESX secretion system protein EccD D BBDE_1488 hypothetical protein K27087 eccD; ESX secretion system protein EccD D BBDE_1496 hypothetical protein K14956 esx; ESAT-6 family protein D BBDE_1495 hypothetical protein K14956 esx; ESAT-6 family protein D BBDE_1351 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BBDE_0334 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D BBDE_1090 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D BBDE_0430 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D BBDE_0300 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D BBDE_0175 signal recognition particle-docking protein K03110 ftsY; fused signal recognition particle receptor D BBDE_1120 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC D BBDE_2139 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:bdn02042] D BBDE_0018 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D BBDE_1000 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D BBDE_0839 conserved hypothetical protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:bdn02022] D BBDE_0367 two-component sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D BBDE_0495 two-component sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D BBDE_0368 two-component response regulator K07776 regX3; two-component system, OmpR family, response regulator RegX3 D BBDE_0743 two-component sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D BBDE_0742 two-component response regulator K02483 K02483; two-component system, OmpR family, response regulator D BBDE_0260 hypothetical protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D BBDE_0458 conserved hypothetical protein K02477 K02477; two-component system, LytTR family, response regulator D BBDE_1171 conserved hypothetical protein K02477 K02477; two-component system, LytTR family, response regulator D BBDE_0840 two-component sensor kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D BBDE_0947 two-component response regulator K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:bdn02035] D BBDE_0669 putative amino acid ABC transporter substrate binding component K02424 tcyA; L-cystine transport system substrate-binding protein D BBDE_0981 conserved hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D BBDE_0199 conserved hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:bdn04812] D BBDE_1512 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BBDE_1432 conserved hypothetical protein K03496 parA; chromosome partitioning protein D BBDE_2136 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D BBDE_2135 putative chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:bdn04147] D BBDE_0830 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BBDE_1439 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BBDE_1086 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D BBDE_0864 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BBDE_1331 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D BBDE_0739 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BBDE_2049 chaperone DnaK K04043 dnaK; molecular chaperone DnaK D BBDE_0320 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BBDE_0042 putative dipeptidyl peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D BBDE_0594 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D BBDE_1151 inositol-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D BBDE_0703 elongation factor Tu K02358 tuf; elongation factor Tu D BBDE_0997 conserved hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D BBDE_1479 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BBDE_1149 putative long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BBDE_1154 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BBDE_1003 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BBDE_1809 putative long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BBDE_0452 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D BBDE_0431 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D BBDE_1119 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D BBDE_1230 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D BBDE_1231 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D BBDE_2021 putative alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D BBDE_1698 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D BBDE_0853 glycosyl hydrolase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D BBDE_1249 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BBDE_1485 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BBDE_2050 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D BBDE_1474 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D BBDE_1115 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D BBDE_1246 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BBDE_0812 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D BBDE_1089 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BBDE_0492 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BBDE_1167 putative phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:bdn02048] D BBDE_1555 CRISPR-associated protein K15342 cas1; CRISP-associated protein Cas1 D BBDE_1195 conserved hypothetical protein K15342 cas1; CRISP-associated protein Cas1 D BBDE_1194 hypothetical protein K09951 cas2; CRISPR-associated protein Cas2 D BBDE_1559 CRISPR-associated helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D BBDE_1557 CRISPR-associated protein K19117 csd1; CRISPR-associated protein Csd1 D BBDE_1556 CRISPR-associated protein K19118 csd2; CRISPR-associated protein Csd2 D BBDE_1558 CRISPR-associated protein K19119 cas5d; CRISPR-associated protein Cas5d D BBDE_1196 conserved hypothetical protein K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] D BBDE_1406 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D BBDE_0954 putative restriction endonuclease K07448 mrr; restriction system protein D BBDE_1771 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D BBDE_1512 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BBDE_0252 glutamyl-tRNA synthase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:bdn04090] D BBDE_0042 putative dipeptidyl peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] C 01504 Antimicrobial resistance genes [BR:bdn01504] D BBDE_1906 putative transport protein K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter D BBDE_0655 putative elongation factor K18220 tetM; ribosomal protection tetracycline resistance protein D BBDE_0807 conserved hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:bdn00537] D BBDE_2050 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:bdn03100] D BBDE_tRNA02 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BBDE_tRNA55 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BBDE_tRNA46 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BBDE_tRNA01 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BBDE_tRNA31 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BBDE_tRNA50 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BBDE_tRNA32 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BBDE_tRNA51 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BBDE_tRNA26 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BBDE_tRNA38 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BBDE_tRNA45 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BBDE_tRNA37 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BBDE_tRNA23 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D BBDE_tRNA21 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D BBDE_tRNA41 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D BBDE_tRNA08 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D BBDE_tRNA48 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D BBDE_tRNA07 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D BBDE_tRNA22 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D BBDE_tRNA05 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BBDE_tRNA12 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BBDE_tRNA39 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BBDE_tRNA40 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BBDE_tRNA27 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BBDE_tRNA30 tRNA-His K14226 tRNA-His; tRNA His D BBDE_tRNA03 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D BBDE_tRNA04 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BBDE_tRNA09 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BBDE_tRNA33 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BBDE_tRNA34 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BBDE_tRNA36 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BBDE_tRNA06 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BBDE_tRNA53 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BBDE_tRNA15 tRNA-Met K14230 tRNA-Met; tRNA Met D BBDE_tRNA52 tRNA-Met K14230 tRNA-Met; tRNA Met D BBDE_tRNA25 tRNA-Met K14230 tRNA-Met; tRNA Met D BBDE_tRNA20 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D BBDE_tRNA24 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D BBDE_tRNA35 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BBDE_tRNA19 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BBDE_tRNA44 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BBDE_tRNA18 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BBDE_tRNA17 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BBDE_tRNA54 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BBDE_tRNA16 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BBDE_tRNA14 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BBDE_tRNA10 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BBDE_tRNA56 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BBDE_tRNA11 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D BBDE_tRNA13 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D BBDE_tRNA29 tRNA-Val K14237 tRNA-Val; tRNA Val D BBDE_tRNA42 tRNA-Val K14237 tRNA-Val; tRNA Val D BBDE_tRNA28 tRNA-Val K14237 tRNA-Val; tRNA Val D BBDE_tRNA43 tRNA-Val K14237 tRNA-Val; tRNA Val D BBDE_tRNA49 tRNA-Val K14237 tRNA-Val; tRNA Val D BBDE_16SrRNA04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BBDE_16SrRNA02 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BBDE_16SrRNA03 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BBDE_16SrRNA01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BBDE_23SrRNA02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BBDE_23SrRNA03 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BBDE_23SrRNA04 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BBDE_23SrRNA01 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BBDE_5SrRNA02 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BBDE_5SrRNA03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BBDE_5SrRNA04 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BBDE_5SrRNA01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D BBDE_1515 conserved hypothetical protein K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D BBDE_1797 putative dehydrogenase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D BBDE_0676 putative alcohol dehydrogenase K08317 hcxA; hydroxycarboxylate dehydrogenase A [EC:1.1.1.-] D BBDE_0312 putative reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D BBDE_0671 putative alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-] D BBDE_1012 putative alcohol dehydrogenase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D BBDE_0057 putative ferredoxin/ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D BBDE_1605 ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D BBDE_1312 pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D BBDE_2115 acetyltransferase K00633 lacA; galactoside O-acetyltransferase [EC:2.3.1.18] D BBDE_0542 putative sugar acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D BBDE_1571 conserved hypothetical protein K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D BBDE_1375 acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D BBDE_1136 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D BBDE_0145 conserved hypothetical protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D BBDE_1041 glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D BBDE_1271 conserved hypothetical protein K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22] D BBDE_1851 formyl-coenzyme A transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16] D BBDE_0112 conserved hypothetical protein K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D BBDE_1943 conserved hypothetical protein K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D BBDE_1297 conserved hypothetical protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D BBDE_1174 conserved hypothetical protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85] D BBDE_1545 conserved hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D BBDE_1038 putative phosphoglycerate K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D BBDE_1965 putative DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D BBDE_1841 conserved hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-] D BBDE_1935 glycosyl hydrolase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89] D BBDE_0224 glycosyl hydrolase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99] D BBDE_1009 glycosyl hydrolase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D BBDE_2019 putative alpha-xylosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D BBDE_2027 putative alpha-xylosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D BBDE_1612 conserved hypothetical protein K18205 hypBA1; non-reducing end beta-L-arabinofuranosidase [EC:3.2.1.185] D BBDE_1611 glycosyl hydrolase K18206 hypBA2; beta-L-arabinobiosidase [EC:3.2.1.187] D BBDE_2032 conserved hypothetical protein K27494 exoMA1; D-arabinan exo alpha-(1,3)/(1,5)-arabinofuranosidase (non-reducing end) [EC:3.2.1.225] D BBDE_2040 conserved hypothetical protein K27494 exoMA1; D-arabinan exo alpha-(1,3)/(1,5)-arabinofuranosidase (non-reducing end) [EC:3.2.1.225] D BBDE_0531 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D BBDE_1148 polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D BBDE_1659 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D BBDE_0081 conserved hypothetical protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D BBDE_0736 conserved hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D BBDE_1679 putative ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D BBDE_0493 conserved hypothetical protein K10254 ohyA; oleate hydratase [EC:4.2.1.53] D BBDE_1058 putative carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D BBDE_0388 truncated cystathionine gamma lyase K26365 cangL; canavanine-gamma-lyase [EC:4.4.1.43] D BBDE_0837 peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D BBDE_1460 conserved hypothetical protein K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31] D BBDE_1447 conserved hypothetical protein K17810 asl; D-aspartate ligase [EC:6.3.1.12] D BBDE_2100 cation-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D BBDE_1409 putative cation-transporting ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D BBDE_0992 conserved hypothetical protein K04488 iscU; nitrogen fixation protein NifU and related proteins C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D BBDE_1886 conserved hypothetical protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D BBDE_0727 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D BBDE_0184 conserved hypothetical protein K03688 ubiB; ubiquinone biosynthesis protein C 99988 Secondary metabolism C 99999 Others D BBDE_1551 putative esterase K06999 K06999; phospholipase/carboxylesterase D BBDE_2098 phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D BBDE_0744 cold shock protein K03704 cspA; cold shock protein C 99974 Translation C 99975 Protein processing D BBDE_1309 trigger factor K03545 tig; trigger factor D BBDE_0616 SsrA-binding protein K03664 smpB; SsrA-binding protein D BBDE_0170 putative glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH D BBDE_0771 conserved hypothetical protein K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D BBDE_1199 conserved hypothetical protein K07445 K07445; putative DNA methylase D BBDE_1878 conserved hypothetical protein K09760 rmuC; DNA recombination protein RmuC D BBDE_0772 conserved hypothetical protein K07460 yraN; putative endonuclease D BBDE_0770 conserved hypothetical protein K04096 smf; DNA processing protein D BBDE_0760 recombination factor protein RarA K07478 ycaJ; putative ATPase D BBDE_0710 conserved hypothetical protein K07483 K07483; transposase D BBDE_1087 conserved hypothetical protein K07483 K07483; transposase D BBDE_0110 conserved hypothetical protein K07483 K07483; transposase D BBDE_1428 conserved hypothetical protein K07483 K07483; transposase D BBDE_1830 conserved hypothetical protein K07483 K07483; transposase D BBDE_0111 conserved hypothetical protein K07497 K07497; putative transposase D BBDE_0711 conserved hypothetical protein K07497 K07497; putative transposase D BBDE_1088 conserved hypothetical protein K07497 K07497; putative transposase D BBDE_1429 conserved hypothetical protein K07497 K07497; putative transposase D BBDE_1831 conserved hypothetical protein K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D BBDE_1582 putative transport protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D BBDE_0136 amino acid transport protein K03293 TC.AAT; amino acid transporter, AAT family D BBDE_0125 aromatic amino acid transport protein K03293 TC.AAT; amino acid transporter, AAT family D BBDE_0647 putative amino acid transport protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D BBDE_0391 amino acid transport protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D BBDE_0699 putative transport protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family C 99978 Cell growth D BBDE_2138 conserved hypothetical protein K06346 jag; spoIIIJ-associated protein C 99993 Cell motility C 99995 Signaling proteins D BBDE_0824 carbon starvation protein K06200 cstA; carbon starvation protein D BBDE_1427 GTP-binding protein K06207 typA; GTP-binding protein D BBDE_1692 conserved hypothetical protein K07166 K07166; ACT domain-containing protein D BBDE_0998 putative phosphate starvation-inducible protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D BBDE_1404 putative phage endolysin K07273 acm; lysozyme C 99994 Others D BBDE_0494 two-component response regulator K02039 phoU; phosphate transport system protein B B 09194 Poorly characterized C 99996 General function prediction only D BBDE_0065 hypothetical protein K06994 K06994; putative drug exporter of the RND superfamily D BBDE_2063 putative hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D BBDE_0988 putative ABC transporter permease component K09014 sufB; Fe-S cluster assembly protein SufB D BBDE_0989 putative ABC transporter permease component K09015 sufD; Fe-S cluster assembly protein SufD D BBDE_0350 conserved hypothetical protein K03744 lemA; LemA protein D BBDE_2036 conserved hypothetical protein K03975 dedA; membrane-associated protein D BBDE_0165 conserved hypothetical protein K01421 yhgE; putative membrane protein D BBDE_0166 conserved hypothetical protein K01421 yhgE; putative membrane protein D BBDE_0043 conserved hypothetical protein K01421 yhgE; putative membrane protein D BBDE_0044 conserved hypothetical protein K01421 yhgE; putative membrane protein D BBDE_0064 conserved hypothetical protein K01421 yhgE; putative membrane protein D BBDE_0974 conserved hypothetical protein K08972 K08972; putative membrane protein D BBDE_1579 conserved hypothetical protein K08981 K08981; putative membrane protein D BBDE_1947 conserved hypothetical protein K08986 ycgQ; putative membrane protein C 99997 Function unknown D BBDE_1025 conserved hypothetical protein K06889 K06889; uncharacterized protein D BBDE_1366 conserved hypothetical protein K06890 K06890; uncharacterized protein D BBDE_2117 truncated conserved hypothetical protein K06921 K06921; uncharacterized protein D BBDE_1229 conserved hypothetical protein K06950 K06950; uncharacterized protein D BBDE_1962 conserved hypothetical protein K06950 K06950; uncharacterized protein D BBDE_0297 conserved hypothetical protein K06960 K06960; uncharacterized protein D BBDE_1213 conserved hypothetical protein K07005 K07005; uncharacterized protein D BBDE_1172 conserved hypothetical protein K07006 K07006; uncharacterized protein D BBDE_1676 putative nucleotidyltransferase K07075 K07075; uncharacterized protein D BBDE_1946 conserved hypothetical protein K07089 K07089; uncharacterized protein D BBDE_0797 putative transport protein K07090 K07090; uncharacterized protein D BBDE_2056 conserved hypothetical protein K07090 K07090; uncharacterized protein D BBDE_0049 conserved hypothetical protein K07118 K07118; uncharacterized protein D BBDE_0815 dehydrogenase K07124 K07124; uncharacterized protein D BBDE_0067 hypothetical protein K07124 K07124; uncharacterized protein D BBDE_1560 conserved hypothetical protein K07133 K07133; uncharacterized protein D BBDE_2037 conserved hypothetical protein K07133 K07133; uncharacterized protein D BBDE_1772 conserved hypothetical protein K07133 K07133; uncharacterized protein D BBDE_0794 conserved hypothetical protein K07138 K07138; uncharacterized protein D BBDE_1073 conserved hypothetical protein K07149 K07149; uncharacterized protein D BBDE_0833 conserved hypothetical protein K09009 K09009; uncharacterized protein D BBDE_0826 conserved hypothetical protein K09118 K09118; uncharacterized protein D BBDE_1691 conserved hypothetical protein K09157 K09157; uncharacterized protein D BBDE_0675 hypothetical protein K09164 K09164; uncharacterized protein D BBDE_1301 conserved hypothetical protein K09384 K09384; uncharacterized protein D BBDE_1182 hypothetical protein K09384 K09384; uncharacterized protein D BBDE_1458 conserved hypothetical protein K09704 K09704; uncharacterized protein D BBDE_0450 conserved hypothetical protein K09705 K09705; uncharacterized protein D BBDE_1978 conserved hypothetical protein K09955 K09955; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024