+D GENES KO #

  KEGG Orthology (KO) - Candidatus Blochmanniella pennsylvanica

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:bpn00010] D BPEN_656 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BPEN_624 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BPEN_262 fbaA; fructose 1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BPEN_623 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BPEN_451 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BPEN_261 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D BPEN_352 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BPEN_162 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BPEN_465 pykA; pyruvate kinase A K00873 PK; pyruvate kinase [EC:2.7.1.40] D BPEN_158 aceE; pyruvate dehydrogenase, decarboxylase subunit (E1), thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D BPEN_157 aceF; pyruvate dehydrogenase, dihydrolipoyltransacetylase subunit (E2) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BPEN_335 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:bpn00020] D BPEN_341 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D BPEN_342 sucB; dihydrolipoamide succinyltransferase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BPEN_344 sucD; succinyl-CoA synthetase, alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D BPEN_343 sucC; succinyl-CoA synthetase, beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BPEN_339 sdhA; succinate dehydrogenase catalytic and flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D BPEN_340 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D BPEN_337 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D BPEN_338 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D BPEN_384 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D BPEN_548 mqo; probable malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D BPEN_158 aceE; pyruvate dehydrogenase, decarboxylase subunit (E1), thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D BPEN_157 aceF; pyruvate dehydrogenase, dihydrolipoyltransacetylase subunit (E2) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:bpn00030] D BPEN_656 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BPEN_464 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D BPEN_351 ybhE; putative isomerase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D BPEN_485 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D BPEN_590 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D BPEN_533 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D BPEN_532 talA; transaldolase A K00616 TALDO1; transaldolase [EC:2.2.1.2] D BPEN_263 rpiA; ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D BPEN_335 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BPEN_356 prsA; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D BPEN_262 fbaA; fructose 1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BPEN_624 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions D BPEN_590 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:bpn00051] D BPEN_624 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BPEN_262 fbaA; fructose 1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BPEN_623 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BPEN_459 manX; PTS family enzyme IIA/enzyme IIB, mannose-specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D BPEN_460 manY; PTS family enzyme IIC, mannose-specific K02795 manY; mannose PTS system EIIC component D BPEN_461 manZ; PTS family enzyme IID, mannose-specific K02796 manZ; mannose PTS system EIID component C 00052 Galactose metabolism [PATH:bpn00052] D BPEN_335 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BPEN_624 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:bpn00500] D BPEN_335 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BPEN_656 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bpn00520] D BPEN_330 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D BPEN_331 nagB; glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D BPEN_103 mrsA; PGM/PMM-family protein K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D BPEN_010 glmU; N-acetyl glucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D BPEN_047 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BPEN_189 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D BPEN_335 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BPEN_459 manX; PTS family enzyme IIA/enzyme IIB, mannose-specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D BPEN_460 manY; PTS family enzyme IIC, mannose-specific K02795 manY; mannose PTS system EIIC component D BPEN_461 manZ; PTS family enzyme IID, mannose-specific K02796 manZ; mannose PTS system EIID component D BPEN_656 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00620 Pyruvate metabolism [PATH:bpn00620] D BPEN_158 aceE; pyruvate dehydrogenase, decarboxylase subunit (E1), thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D BPEN_157 aceF; pyruvate dehydrogenase, dihydrolipoyltransacetylase subunit (E2) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BPEN_465 pykA; pyruvate kinase A K00873 PK; pyruvate kinase [EC:2.7.1.40] D BPEN_295 accA; acetylCoA carboxylase, carboxytransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D BPEN_300 accB; acetylCoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D BPEN_299 accC; acetyl CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D BPEN_511 accD; acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D BPEN_230 gloB; probable hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D BPEN_435 ycbL; putative enzyme with metallo-hydrolase/oxidoreductase domain K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D BPEN_548 mqo; probable malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D BPEN_384 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D BPEN_137 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bpn00630] D BPEN_643 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BPEN_556 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00640 Propanoate metabolism [PATH:bpn00640] D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BPEN_295 accA; acetylCoA carboxylase, carboxytransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D BPEN_300 accB; acetylCoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D BPEN_299 accC; acetyl CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D BPEN_511 accD; acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D BPEN_343 sucC; succinyl-CoA synthetase, beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BPEN_344 sucD; succinyl-CoA synthetase, alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:bpn00650] D BPEN_339 sdhA; succinate dehydrogenase catalytic and flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D BPEN_340 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D BPEN_337 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D BPEN_338 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D BPEN_614 ilvG; acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BPEN_613 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:bpn00660] D BPEN_614 ilvG; acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BPEN_613 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D BPEN_343 sucC; succinyl-CoA synthetase, beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BPEN_344 sucD; succinyl-CoA synthetase, alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D BPEN_135 leuC; 3-isopropylmalate dehydratase subunit 2 K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D BPEN_134 leuD; 3-isopropylmalate dehydratase subunit 1 K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D BPEN_136 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:bpn00562] D BPEN_555 suhB; putative myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D BPEN_623 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:bpn00190] D BPEN_509 nuoA; NADH dehydrogenase I chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D BPEN_508 nuoB; NADH dehydrogenase I chain B, binds FeS cluster N2 K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D BPEN_507 nuoCD; NADH dehydrogenase I chain C, D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D BPEN_506 nuoE; NADH dehydrogenase I chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D BPEN_505 nuoF; NADH dehydrogenase I chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D BPEN_504 nuoG; NADH dehydrogenase I chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D BPEN_503 nuoH; NADH dehydrogenase I chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D BPEN_502 nuoI; NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D BPEN_501 nuoJ; NADH dehydrogenase I chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D BPEN_500 nuoK; NADH dehydrogenase I chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D BPEN_499 nuoL; NADH dehydrogenase I chain L, membrane subunit K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D BPEN_498 nuoM; NADH dehydrogenase I chain M, membrane subunit K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D BPEN_497 nuoN; NADH dehydrogenase I chain N, membrane subunit K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D BPEN_339 sdhA; succinate dehydrogenase catalytic and flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D BPEN_340 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D BPEN_337 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D BPEN_338 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D BPEN_248 cyoE; protohaeme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D BPEN_249 cyoD; cytochrome o ubiquinol oxidase, subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D BPEN_250 cyoC; cytochrome o ubiquinol oxidase, subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D BPEN_251 cyoB; cytochrome o ubiquinol oxidase, subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D BPEN_252 cyoA; cytochrome o ubiquinol oxidase, subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D BPEN_006 atpA; ATP synthase, F1 sector, alpha-subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D BPEN_008 atpD; ATP synthase, F1 sector, beta-subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D BPEN_007 atpG; ATP synthase, F1 sector, gamma-subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D BPEN_005 atpH; ATP synthase, F1 sector, delta-subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D BPEN_009 atpC; ATP synthase, F1 sector, epsilon-subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D BPEN_002 atpB; ATP synthase, F0 sector, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D BPEN_004 atpF; ATP synthase, F0 sector, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D BPEN_003 atpE; ATP synthase, F0 sector, subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D BPEN_094 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:bpn00710] D BPEN_261 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D BPEN_451 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BPEN_262 fbaA; fructose 1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BPEN_533 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D BPEN_263 rpiA; ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D BPEN_623 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BPEN_590 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D BPEN_532 talA; transaldolase A K00616 TALDO1; transaldolase [EC:2.2.1.2] C 00720 Other carbon fixation pathways [PATH:bpn00720] D BPEN_384 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D BPEN_339 sdhA; succinate dehydrogenase catalytic and flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D BPEN_340 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D BPEN_337 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D BPEN_338 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D BPEN_344 sucD; succinyl-CoA synthetase, alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D BPEN_343 sucC; succinyl-CoA synthetase, beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BPEN_295 accA; acetylCoA carboxylase, carboxytransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D BPEN_300 accB; acetylCoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D BPEN_299 accC; acetyl CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D BPEN_511 accD; acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D BPEN_313 folD; 5,10-methylene-tetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D BPEN_619 metF; 5,10 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] C 00680 Methane metabolism [PATH:bpn00680] D BPEN_556 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BPEN_162 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BPEN_262 fbaA; fructose 1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BPEN_624 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BPEN_352 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BPEN_394 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00910 Nitrogen metabolism D BPEN_643 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] C 00920 Sulfur metabolism [PATH:bpn00920] D BPEN_531 cysP; thiosulfate transport protein (ABC superfamily, peri_bind) K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D BPEN_530 cysU; thiosulfate transport protein (ABC superfamily, membrane) K02046 cysU; sulfate/thiosulfate transport system permease protein D BPEN_529 cysW; thiosulfate permease W protein (ABC superfamily, membrane) K02047 cysW; sulfate/thiosulfate transport system permease protein D BPEN_528 cysA; sulfate permease A protein, chromate resistance (ABC superfamily, atp_bind) K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D BPEN_168 cysN; ATP-sulfurylase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D BPEN_167 cysD; ATP-sulfurylase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D BPEN_169 cysC; adenosine 5-phosphosulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D BPEN_091 cysQ; CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D BPEN_165 cysH; 3'-phosphoadenosine 5'-phosphosulfate (PAPS) reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D BPEN_163 cysJ; sulfite reductase, alpha subunit (flavoprotein) K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D BPEN_164 cysI; sulfite reductase, beta subunit, NADPH-dependent hemoprotein K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D BPEN_625 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D BPEN_525 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D BPEN_657 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D BPEN_620 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:bpn00061] D BPEN_295 accA; acetylCoA carboxylase, carboxytransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D BPEN_300 accB; acetylCoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D BPEN_299 accC; acetyl CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D BPEN_511 accD; acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D BPEN_415 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D BPEN_417 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D BPEN_418 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D BPEN_514 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D BPEN_416 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BPEN_432 fabA; D-3-hydroxydecanoyl-(acyl carrier-protein) K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D BPEN_290 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D BPEN_436 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:bpn00561] D BPEN_419 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D BPEN_061 ygiH; putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D BPEN_068 plsC; 1-acyl-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:bpn00564] D BPEN_626 gpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D BPEN_061 ygiH; putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D BPEN_068 plsC; 1-acyl-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D BPEN_285 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D BPEN_571 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D BPEN_076 psd; phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D BPEN_427 pgsA; phosphotidylglycerophosphate synthetase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D BPEN_243 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D BPEN_446 cls; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:bpn00230] D BPEN_335 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BPEN_356 prsA; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D BPEN_405 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D BPEN_575 purH; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D BPEN_308 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D BPEN_547 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D BPEN_553 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D BPEN_546 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D BPEN_641 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D BPEN_494 nrdA; ribonucleoside diphosphate reductase 1, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D BPEN_495 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D BPEN_086 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D BPEN_310 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D BPEN_129 apaH; bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D BPEN_169 cysC; adenosine 5-phosphosulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D BPEN_168 cysN; ATP-sulfurylase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D BPEN_167 cysD; ATP-sulfurylase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D BPEN_542 ureC; putative urease structural subunit C (alpha) K01428 ureC; urease subunit alpha [EC:3.5.1.5] D BPEN_543 ureB; putative urease structural subunit B (beta) K01429 ureB; urease subunit beta [EC:3.5.1.5] D BPEN_544 ureA; putative urease structural subunit A (gamma) K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:bpn00240] D BPEN_127 carB; carbamoyl-phosphate synthase, large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D BPEN_126 carA; carbamoyl-phosphate synthase, small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D BPEN_281 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D BPEN_553 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D BPEN_161 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D BPEN_392 cmk; cytidine monophosphate (CMP) kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D BPEN_651 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D BPEN_538 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D BPEN_494 nrdA; ribonucleoside diphosphate reductase 1, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D BPEN_495 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D BPEN_413 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D BPEN_638 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D BPEN_447 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:bpn00250] D BPEN_434 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D BPEN_086 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D BPEN_405 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D BPEN_643 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BPEN_127 carB; carbamoyl-phosphate synthase, large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D BPEN_126 carA; carbamoyl-phosphate synthase, small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] C 00260 Glycine, serine and threonine metabolism [PATH:bpn00260] D BPEN_115 thrA; aspartokinase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D BPEN_594 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D BPEN_116 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D BPEN_117 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D BPEN_556 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BPEN_352 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BPEN_394 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BPEN_571 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D BPEN_610 ilvA; threonine deaminase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D BPEN_443 trpA; tryptophan synthase, alpha protein K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D BPEN_442 trpB; tryptophan synthase, beta protein K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:bpn00270] D BPEN_625 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D BPEN_525 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D BPEN_069 metC; beta-cystathionase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BPEN_652 metE; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D BPEN_259 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D BPEN_115 thrA; aspartokinase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D BPEN_594 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D BPEN_657 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D BPEN_620 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D BPEN_612 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D BPEN_434 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D BPEN_394 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:bpn00280] D BPEN_612 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:bpn00290] D BPEN_610 ilvA; threonine deaminase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D BPEN_135 leuC; 3-isopropylmalate dehydratase subunit 2 K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D BPEN_134 leuD; 3-isopropylmalate dehydratase subunit 1 K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D BPEN_136 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D BPEN_614 ilvG; acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BPEN_613 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D BPEN_609 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D BPEN_611 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D BPEN_612 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D BPEN_137 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:bpn00300] D BPEN_115 thrA; aspartokinase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D BPEN_594 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D BPEN_536 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D BPEN_125 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D BPEN_277 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D BPEN_534 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D BPEN_600 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D BPEN_271 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D BPEN_141 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BPEN_142 murF; D-alanine:D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:bpn00310] D BPEN_342 sucB; dihydrolipoamide succinyltransferase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis [PATH:bpn00220] D BPEN_032 argI; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D BPEN_542 ureC; putative urease structural subunit C (alpha) K01428 ureC; urease subunit alpha [EC:3.5.1.5] D BPEN_543 ureB; putative urease structural subunit B (beta) K01429 ureB; urease subunit beta [EC:3.5.1.5] D BPEN_544 ureA; putative urease structural subunit A (gamma) K01430 ureA; urease subunit gamma [EC:3.5.1.5] D BPEN_643 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BPEN_127 carB; carbamoyl-phosphate synthase, large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D BPEN_126 carA; carbamoyl-phosphate synthase, small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D BPEN_434 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00330 Arginine and proline metabolism [PATH:bpn00330] D BPEN_260 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D BPEN_434 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:bpn00340] D BPEN_477 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D BPEN_484 hisI; phosphoribosyl-AMP cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D BPEN_482 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D BPEN_481 hisH; glutamine amidotransferase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D BPEN_483 hisF; imidazole glycerol phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D BPEN_480 hisB; histidinol-phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D BPEN_479 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BPEN_478 hisD; L-histidinal:NAD+ dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:bpn00350] D BPEN_434 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D BPEN_479 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00360 Phenylalanine metabolism [PATH:bpn00360] D BPEN_434 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D BPEN_479 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism D BPEN_342 sucB; dihydrolipoamide succinyltransferase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bpn00400] D BPEN_183 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D BPEN_591 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D BPEN_301 aroQ; 3-dehydroquinate dehydratase II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D BPEN_228 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D BPEN_592 aroK; shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71] D BPEN_393 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D BPEN_516 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D BPEN_438 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D BPEN_439 trpG; anthranilate synthase component II: glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D BPEN_440 trpD; anthranilate synthase component II: anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D BPEN_441 trpC; indole-3-glycerolphosphate synthetase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D BPEN_443 trpA; tryptophan synthase, alpha protein K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D BPEN_442 trpB; tryptophan synthase, beta protein K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D BPEN_184 tyrA; chorismate mutase T K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D BPEN_185 pheA; chorismate mutase P K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D BPEN_434 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D BPEN_479 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:bpn00450] D BPEN_620 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D BPEN_069 metC; beta-cystathionase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BPEN_652 metE; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D BPEN_373 sufS; selenocysteine lyase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D BPEN_398 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D BPEN_168 cysN; ATP-sulfurylase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D BPEN_167 cysD; ATP-sulfurylase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D BPEN_486 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D BPEN_556 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:bpn00470] D BPEN_490 ddlA; D-alanine:D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BPEN_618 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D BPEN_144 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D BPEN_600 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D BPEN_271 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:bpn00480] D BPEN_035 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D BPEN_485 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D BPEN_464 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:bpn00540] D BPEN_291 lpxA; UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D BPEN_151 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D BPEN_289 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D BPEN_311 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D BPEN_292 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D BPEN_389 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D BPEN_361 kdsA; 3-deoxy-D-manno-octulosonic acid 8-P synthetase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D BPEN_387 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D BPEN_633 kdtA; Kdo transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D BPEN_423 lpxL; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D BPEN_233 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D BPEN_065 hldE; ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D BPEN_298 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D BPEN_630 hldD; ADP-L-Glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D BPEN_632 rfaC; ADP-heptose; LPS heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D BPEN_631 rfaF; ADP-heptose; LPS heptosyl transferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis D BPEN_010 glmU; N-acetyl glucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:bpn00550] D BPEN_047 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BPEN_189 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D BPEN_147 murC; UDP-N-acetyl-muramate:alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D BPEN_144 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D BPEN_141 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BPEN_490 ddlA; D-alanine:D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BPEN_142 murF; D-alanine:D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D BPEN_284 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D BPEN_063 bacA; bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D BPEN_143 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D BPEN_146 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D BPEN_159 mrcB; penicillin-binding protein 1b: glycosyl transferase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D BPEN_317 mrdA; cell elongation-specific transpeptidase of penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D BPEN_140 ftsI; division-specific transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:bpn00552] D BPEN_063 bacA; bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:bpn00543] D BPEN_625 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:bpn00730] D BPEN_554 nifS; putative L-cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D BPEN_246 thiI; sulfur transfer protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D BPEN_244 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D BPEN_310 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:bpn00740] D BPEN_437 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D BPEN_240 ribD; pyrimidine deaminase/reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D BPEN_599 yigB; putative hydrolase of the HAD superfamily K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D BPEN_067 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D BPEN_241 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D BPEN_377 ribE; riboflavin synthase, alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D BPEN_121 ribF; bifunctional: flavokinase; FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D BPEN_386 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:bpn00750] D BPEN_381 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D BPEN_513 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D BPEN_394 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D BPEN_131 pdxA; pyridoxine phosphate biosynthetic protein PdxJ-PdxA subunit, NAD-dependent dehydrogenase/carboxylase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D BPEN_559 pdxJ; putative pyridoxal phosphate biosynthetic protein K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D BPEN_117 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism D BPEN_565 yfjB; probable inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:bpn00770] D BPEN_614 ilvG; acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BPEN_613 ilvM; acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D BPEN_609 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D BPEN_611 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D BPEN_191 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D BPEN_637 dfp; 4'-phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D BPEN_634 coaD; CMP-deoxy-D-manno-octulosonate-lipid A transferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D BPEN_153 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D BPEN_558 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D BPEN_612 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism [PATH:bpn00780] D BPEN_514 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D BPEN_416 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BPEN_290 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D BPEN_436 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D BPEN_190 birA; biotin-[acetylCoA carboxylase] holoenzyme synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:bpn00785] D BPEN_368 lplA; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BPEN_158 aceE; pyruvate dehydrogenase, decarboxylase subunit (E1), thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D BPEN_157 aceF; pyruvate dehydrogenase, dihydrolipoyltransacetylase subunit (E2) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D BPEN_341 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D BPEN_342 sucB; dihydrolipoamide succinyltransferase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] C 00790 Folate biosynthesis [PATH:bpn00790] D BPEN_487 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D BPEN_062 folB; dihydroneopterin aldolase, also has dihydroneopterin triphosphate K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D BPEN_155 folK; 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D BPEN_102 folP; 7,8-dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D BPEN_128 folA; dihydrofolate reductase type I K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D BPEN_510 folC; folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D BPEN_437 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D BPEN_588 pabA; aminodeoxychorismate synthase subunit II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D BPEN_457 pabB; aminodeoxychorismate synthase subunit I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D BPEN_414 pabC; 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] C 00670 One carbon pool by folate [PATH:bpn00670] D BPEN_128 folA; dihydrofolate reductase type I K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D BPEN_313 folD; 5,10-methylene-tetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D BPEN_556 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BPEN_575 purH; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D BPEN_225 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D BPEN_619 metF; 5,10 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D BPEN_264 ygfA; putative ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:bpn00860] D BPEN_521 gltX; glutamate tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BPEN_601 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D BPEN_602 hemD; uroporphyrinogen III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D BPEN_166 cysG; multifunctional siroheme synthase: uroporphyrinogen methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D BPEN_248 cyoE; protohaeme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D BPEN_196 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:bpn00130] D BPEN_025 ubiA; 4-hydroxybenzoate octaprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D BPEN_647 ubiD; 3-octaprenyl-4-hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D BPEN_386 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D BPEN_267 visC; putative monooxygenase, FAD/NAD(P)-binding domain K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D BPEN_493 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D BPEN_266 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D BPEN_649 ubiE; 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D BPEN_326 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:bpn00900] D BPEN_244 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D BPEN_283 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D BPEN_171 ispD; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D BPEN_357 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D BPEN_172 ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D BPEN_551 ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D BPEN_124 ispH; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S protein K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D BPEN_386 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D BPEN_245 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D BPEN_095 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D BPEN_284 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D BPEN_533 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:bpn00261] D BPEN_168 cysN; ATP-sulfurylase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D BPEN_167 cysD; ATP-sulfurylase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D BPEN_115 thrA; aspartokinase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D BPEN_594 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D BPEN_536 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D BPEN_125 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:bpn00521] D BPEN_335 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BPEN_555 suhB; putative myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis [PATH:bpn00401] D BPEN_184 tyrA; chorismate mutase T K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D BPEN_434 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D BPEN_479 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D BPEN_438 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D BPEN_439 trpG; anthranilate synthase component II: glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D BPEN_417 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D BPEN_416 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BPEN_436 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D BPEN_415 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:bpn00999] D BPEN_259 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D BPEN_228 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation D BPEN_386 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation D BPEN_542 ureC; putative urease structural subunit C (alpha) K01428 ureC; urease subunit alpha [EC:3.5.1.5] D BPEN_543 ureB; putative urease structural subunit B (beta) K01429 ureB; urease subunit beta [EC:3.5.1.5] D BPEN_544 ureA; putative urease structural subunit A (gamma) K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:bpn03020] D BPEN_577 rpoB; DNA-directed RNA polymerase, beta-subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D BPEN_576 rpoC; DNA-directed RNA polymerase, beta-prime-subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D BPEN_223 rpoA; RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D BPEN_642 rpoZ; DNA-directed RNA polymerase, subunit K/omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:bpn03010] D BPEN_391 rpsA; 30S ribosomal subunit protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D BPEN_279 rpsB; 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D BPEN_204 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D BPEN_222 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D BPEN_215 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D BPEN_088 rpsF; 30S ribosomal subunit protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D BPEN_586 rpsG; 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D BPEN_212 rpsH; 30S ribosomal subunit protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D BPEN_051 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D BPEN_197 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D BPEN_221 rpsK; 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D BPEN_587 rpsL; 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D BPEN_220 rpsM; 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D BPEN_211 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D BPEN_111 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D BPEN_179 rpsP; 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D BPEN_207 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D BPEN_089 rpsR; 30S ribosomal subunit protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D BPEN_202 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D BPEN_120 rpsT; 30S ribosomal subunit protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D BPEN_059 rpsU; 30S ribosomal subunit protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D BPEN_580 rplA; 50S ribosomal subunit protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D BPEN_201 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D BPEN_198 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D BPEN_199 rplD; 50S ribosomal subunit protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D BPEN_210 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D BPEN_213 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D BPEN_578 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D BPEN_090 rplI; 50S ribosomal subunit protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D BPEN_579 rplJ; 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D BPEN_581 rplK; 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D BPEN_050 rplM; 50S ribosomal subunitprotein L13 K02871 RP-L13; large subunit ribosomal protein L13 D BPEN_208 rplN; 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D BPEN_217 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D BPEN_205 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D BPEN_224 rplQ; 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D BPEN_214 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D BPEN_182 rplS; 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D BPEN_365 rplT; 50S ribosomal subunit protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D BPEN_096 rplU; 50S ribosomal subunit protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D BPEN_203 rplV; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D BPEN_200 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D BPEN_209 rplX; 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D BPEN_488 rplY; 50S ribosomal subunit protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D BPEN_097 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D BPEN_636 rpmB; 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D BPEN_206 rpmC; 50S ribosomal subunit protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D BPEN_621 rpmE; 50S ribosomal subunit protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D BPEN_420 rpmF; 50S ribosomal subunit protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D BPEN_635 rpmG; 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D BPEN_014 rmpH; 50S ribosomal subunit protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D BPEN_364 rpmI; 50S ribosomal subunit protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D BPEN_219 rmpJ; 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D BPEN_572 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BPEN_574 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BPEN_229 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:bpn00970] D BPEN_520 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BPEN_617 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BPEN_606 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BPEN_177 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BPEN_314 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BPEN_517 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BPEN_473 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BPEN_616 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D BPEN_426 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D BPEN_327 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D BPEN_573 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D BPEN_078 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BPEN_605 tRNA-His K14226 tRNA-His; tRNA His D BPEN_658 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D BPEN_105 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BPEN_039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BPEN_604 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BPEN_425 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BPEN_328 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BPEN_523 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BPEN_428 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BPEN_329 tRNA-Met K14230 tRNA-Met; tRNA Met D BPEN_056 tRNA-Met K14230 tRNA-Met; tRNA Met D BPEN_106 tRNA-Met K14230 tRNA-Met; tRNA Met D BPEN_070 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D BPEN_603 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BPEN_489 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BPEN_022 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BPEN_176 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BPEN_429 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BPEN_471 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BPEN_472 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BPEN_192 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BPEN_195 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BPEN_234 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BPEN_615 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D BPEN_193 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D BPEN_376 tRNA-Val K14237 tRNA-Val; tRNA Val D BPEN_522 tRNA-Val K14237 tRNA-Val; tRNA Val D BPEN_521 gltX; glutamate tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BPEN_332 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D BPEN_174 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D BPEN_467 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BPEN_433 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D BPEN_019 glyQ; glycine-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D BPEN_020 glyS; glycine-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D BPEN_362 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D BPEN_395 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D BPEN_312 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D BPEN_486 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BPEN_225 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D BPEN_033 valS; valine tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D BPEN_321 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BPEN_122 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D BPEN_270 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D BPEN_468 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BPEN_297 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D BPEN_550 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D BPEN_366 pheS; phenylalanine tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D BPEN_367 pheT; phenylalanine tRNA synthetase, beta-subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D BPEN_382 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BPEN_589 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:bpn03060] D BPEN_218 secY; preprotein translocase, membrane component K03076 secY; preprotein translocase subunit SecY D BPEN_583 secE; preprotein translocase, membrane component K03073 secE; preprotein translocase subunit SecE D BPEN_104 secG; preprotein translocase, membrane component K03075 secG; preprotein translocase subunit SecG D BPEN_238 secD; preprotein translocase, auxillary membrane component K03072 secD; preprotein translocase subunit SecD D BPEN_239 secF; preprotein translocase, auxillary membrane component K03074 secF; preprotein translocase subunit SecF D BPEN_237 yajC; preprotein translocase, auxillary membrane component K03210 yajC; preprotein translocase subunit YajC D BPEN_012 yidCD; putative protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D BPEN_152 secA; preprotein translocase, ATPase secretion component K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BPEN_627 secB; molecular chaperone in protein export K03071 secB; preprotein translocase subunit SecB D BPEN_178 ffh; 4.5S-RNP protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D BPEN_654 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor D BPEN_561 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D BPEN_123 lspA; prolipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:bpn04122] D BPEN_554 nifS; putative L-cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D BPEN_430 yccK; putative sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D BPEN_404 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D BPEN_246 thiI; sulfur transfer protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] C 03050 Proteasome C 03018 RNA degradation [PATH:bpn03018] D BPEN_272 ygdP; nucleotide hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D BPEN_422 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D BPEN_162 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BPEN_112 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D BPEN_113 deaD; cold-shock DeaD box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D BPEN_607 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D BPEN_624 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BPEN_118 dnaK; DnaK K04043 dnaK; molecular chaperone DnaK D BPEN_073 groEL; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BPEN_082 hfq; host factor I K03666 hfq; host factor-I protein B B 09124 Replication and repair C 03030 DNA replication [PATH:bpn03030] D BPEN_232 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BPEN_294 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BPEN_309 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BPEN_412 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BPEN_319 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BPEN_114 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D BPEN_034 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D BPEN_015 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BPEN_027 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D BPEN_058 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D BPEN_028 ssb; ssDNA-binding protein controls activity of RecBCD nuclease K03111 ssb; single-strand DNA-binding protein D BPEN_231 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D BPEN_293 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D BPEN_645 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D BPEN_524 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:bpn03410] D BPEN_383 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D BPEN_563 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D BPEN_256 mutY; adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D BPEN_449 xthA; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D BPEN_645 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D BPEN_524 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:bpn03420] D BPEN_645 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D BPEN_524 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:bpn03430] D BPEN_476 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D BPEN_028 ssb; ssDNA-binding protein controls activity of RecBCD nuclease K03111 ssb; single-strand DNA-binding protein D BPEN_294 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BPEN_015 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BPEN_309 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BPEN_319 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BPEN_412 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BPEN_232 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BPEN_034 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D BPEN_114 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D BPEN_524 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:bpn03440] D BPEN_028 ssb; ssDNA-binding protein controls activity of RecBCD nuclease K03111 ssb; single-strand DNA-binding protein D BPEN_645 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D BPEN_276 recB; exonuclease V K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D BPEN_274 recC; exonuclease V, gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D BPEN_275 recD; exonuclease V, alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D BPEN_294 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BPEN_015 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BPEN_309 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BPEN_319 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BPEN_412 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BPEN_232 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BPEN_034 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D BPEN_114 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:bpn02010] D BPEN_531 cysP; thiosulfate transport protein (ABC superfamily, peri_bind) K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D BPEN_530 cysU; thiosulfate transport protein (ABC superfamily, membrane) K02046 cysU; sulfate/thiosulfate transport system permease protein D BPEN_529 cysW; thiosulfate permease W protein (ABC superfamily, membrane) K02047 cysW; sulfate/thiosulfate transport system permease protein D BPEN_528 cysA; sulfate permease A protein, chromate resistance (ABC superfamily, atp_bind) K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D BPEN_408 lolC; transport protein of outer membrane lipoproteins (ABC superfamily, membrane) K09808 lolC_E; lipoprotein-releasing system permease protein D BPEN_406 lolE; transport protein of outer membrane lipoproteins (ABC superfamily, membrane) K09808 lolC_E; lipoprotein-releasing system permease protein D BPEN_407 lolD; transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D BPEN_036 yjgP; putative transmembrane protein, transport K07091 lptF; lipopolysaccharide export system permease protein D BPEN_037 yjgQ; putative transmembrane protein, transport K11720 lptG; lipopolysaccharide export system permease protein D BPEN_043 yhbG; putative transport protein (ABC superfamily, atp_bind) K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D BPEN_390 msbA; lipid transport protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] C 02060 Phosphotransferase system (PTS) [PATH:bpn02060] D BPEN_527 ptsI; PTS family enzyme I and Hpr components, PEP-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D BPEN_526 ptsH; PTS family Hpr protein, phosphohistidinoprotein-hexose phosphotransferase K02784 ptsH; phosphocarrier protein HPr D BPEN_459 manX; PTS family enzyme IIA/enzyme IIB, mannose-specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D BPEN_460 manY; PTS family enzyme IIC, mannose-specific K02795 manY; mannose PTS system EIIC component D BPEN_461 manZ; PTS family enzyme IID, mannose-specific K02796 manZ; mannose PTS system EIID component C 03070 Bacterial secretion system [PATH:bpn03070] D BPEN_238 secD; preprotein translocase, auxillary membrane component K03072 secD; preprotein translocase subunit SecD D BPEN_239 secF; preprotein translocase, auxillary membrane component K03074 secF; preprotein translocase subunit SecF D BPEN_583 secE; preprotein translocase, membrane component K03073 secE; preprotein translocase subunit SecE D BPEN_104 secG; preprotein translocase, membrane component K03075 secG; preprotein translocase subunit SecG D BPEN_218 secY; preprotein translocase, membrane component K03076 secY; preprotein translocase subunit SecY D BPEN_237 yajC; preprotein translocase, auxillary membrane component K03210 yajC; preprotein translocase subunit YajC D BPEN_012 yidCD; putative protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D BPEN_152 secA; preprotein translocase, ATPase secretion component K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BPEN_654 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor D BPEN_627 secB; molecular chaperone in protein export K03071 secB; preprotein translocase subunit SecB D BPEN_178 ffh; 4.5S-RNP protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:bpn02020] D BPEN_491 omp; outer membrane protein K09475 ompC; outer membrane pore protein C D BPEN_175 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D BPEN_643 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:bpn02024] D BPEN_082 hfq; host factor I K03666 hfq; host factor-I protein D BPEN_438 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D BPEN_439 trpG; anthranilate synthase component II: glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D BPEN_183 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D BPEN_026 zur; transcriptional repressor of Zn transport system (Fur family) K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D BPEN_437 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D BPEN_240 ribD; pyrimidine deaminase/reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D BPEN_012 yidCD; putative protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D BPEN_583 secE; preprotein translocase, membrane component K03073 secE; preprotein translocase subunit SecE D BPEN_104 secG; preprotein translocase, membrane component K03075 secG; preprotein translocase subunit SecG D BPEN_218 secY; preprotein translocase, membrane component K03076 secY; preprotein translocase subunit SecY D BPEN_237 yajC; preprotein translocase, auxillary membrane component K03210 yajC; preprotein translocase subunit YajC D BPEN_152 secA; preprotein translocase, ATPase secretion component K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BPEN_654 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor D BPEN_627 secB; molecular chaperone in protein export K03071 secB; preprotein translocase subunit SecB D BPEN_178 ffh; 4.5S-RNP protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D BPEN_057 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D BPEN_162 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:bpn01501] D BPEN_491 omp; outer membrane protein K09475 ompC; outer membrane pore protein C D BPEN_317 mrdA; cell elongation-specific transpeptidase of penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D BPEN_140 ftsI; division-specific transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:bpn01502] D BPEN_490 ddlA; D-alanine:D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BPEN_142 murF; D-alanine:D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D BPEN_143 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D BPEN_146 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bpn01503] D BPEN_080 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D BPEN_646 dsbA; periplasmic protein disulfide isomerase I, disulfide bond formation K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D BPEN_291 lpxA; UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:bpn01000] C 01001 Protein kinases C 01009 Protein phosphatases and associated proteins [BR:bpn01009] D BPEN_624 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 01002 Peptidases and inhibitors [BR:bpn01002] D BPEN_123 lspA; prolipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D BPEN_546 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D BPEN_424 ybiS; putative exported protein K19235 ybiS; L,D-transpeptidase YbiS D BPEN_023 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D BPEN_035 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D BPEN_534 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D BPEN_466 yebA; conserved protein with LysM domain K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D BPEN_278 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D BPEN_101 hflB; HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D BPEN_463 htpX; heat shock protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D BPEN_286 ecfE; putative membrane protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D BPEN_048 degQ; serine protease K04772 degQ; serine protease DegQ [EC:3.4.21.-] D BPEN_253 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D BPEN_307 lon; DNA-binding ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D BPEN_561 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D BPEN_450 sppA; protease IV K04773 sppA; protease IV [EC:3.4.21.-] D BPEN_306 pmbA; PmbA K03592 pmbA; PmbA protein D BPEN_305 tldD; TldD K03568 tldD; TldD protein D BPEN_085 hflC; HflC K04087 hflC; modulator of FtsH protease HflC D BPEN_084 hflK; HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:bpn01003] D BPEN_159 mrcB; penicillin-binding protein 1b: glycosyl transferase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:bpn01005] D BPEN_291 lpxA; UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D BPEN_292 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D BPEN_151 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D BPEN_289 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D BPEN_311 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D BPEN_389 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D BPEN_423 lpxL; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D BPEN_633 kdtA; Kdo transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D BPEN_361 kdsA; 3-deoxy-D-manno-octulosonic acid 8-P synthetase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D BPEN_387 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D BPEN_632 rfaC; ADP-heptose; LPS heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D BPEN_631 rfaF; ADP-heptose; LPS heptosyl transferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D BPEN_233 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D BPEN_298 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D BPEN_065 hldE; ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D BPEN_630 hldD; ADP-L-Glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bpn01011] D BPEN_047 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BPEN_189 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D BPEN_147 murC; UDP-N-acetyl-muramate:alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D BPEN_144 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D BPEN_141 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BPEN_490 ddlA; D-alanine:D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BPEN_618 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D BPEN_143 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D BPEN_146 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D BPEN_063 bacA; bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D BPEN_469 mviN; putative virulence factor K03980 murJ; putative peptidoglycan lipid II flippase D BPEN_159 mrcB; penicillin-binding protein 1b: glycosyl transferase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D BPEN_317 mrdA; cell elongation-specific transpeptidase of penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D BPEN_140 ftsI; division-specific transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D BPEN_424 ybiS; putative exported protein K19235 ybiS; L,D-transpeptidase YbiS D BPEN_466 yebA; conserved protein with LysM domain K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D BPEN_402 emtA; membrane-bound lytic murein transglycosylase E K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29] D BPEN_080 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D BPEN_375 lpp; murein lipoprotein K06078 lpp; murein lipoprotein C 01004 Lipid biosynthesis proteins [BR:bpn01004] D BPEN_417 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D BPEN_418 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D BPEN_514 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D BPEN_416 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BPEN_432 fabA; D-3-hydroxydecanoyl-(acyl carrier-protein) K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D BPEN_290 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D BPEN_436 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D BPEN_419 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D BPEN_061 ygiH; putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D BPEN_068 plsC; 1-acyl-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:bpn01006] D BPEN_245 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D BPEN_095 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D BPEN_284 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D BPEN_081 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D BPEN_025 ubiA; 4-hydroxybenzoate octaprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D BPEN_248 cyoE; protohaeme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:bpn01007] D BPEN_521 gltX; glutamate tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BPEN_332 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D BPEN_382 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BPEN_589 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D BPEN_312 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D BPEN_468 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BPEN_486 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BPEN_122 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D BPEN_033 valS; valine tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D BPEN_321 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BPEN_270 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D BPEN_467 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BPEN_433 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D BPEN_550 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D BPEN_019 glyQ; glycine-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D BPEN_020 glyS; glycine-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D BPEN_395 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D BPEN_297 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D BPEN_362 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D BPEN_174 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D BPEN_366 pheS; phenylalanine tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D BPEN_367 pheT; phenylalanine tRNA synthetase, beta-subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D BPEN_434 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D BPEN_479 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BPEN_612 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D BPEN_394 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:bpn00194] D BPEN_009 atpC; ATP synthase, F1 sector, epsilon-subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D BPEN_008 atpD; ATP synthase, F1 sector, beta-subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D BPEN_007 atpG; ATP synthase, F1 sector, gamma-subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D BPEN_006 atpA; ATP synthase, F1 sector, alpha-subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D BPEN_005 atpH; ATP synthase, F1 sector, delta-subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D BPEN_004 atpF; ATP synthase, F0 sector, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D BPEN_003 atpE; ATP synthase, F0 sector, subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D BPEN_002 atpB; ATP synthase, F0 sector, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:bpn03000] D BPEN_380 slyA; transcriptional activator for hemolysin (MarR family) K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D BPEN_026 zur; transcriptional repressor of Zn transport system (Fur family) K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D BPEN_403 mntR; transcriptional regulator of mntH, Mn(2+) responsive K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D BPEN_190 birA; biotin-[acetylCoA carboxylase] holoenzyme synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D BPEN_258 yqgE; putative transcriptional regulator K07735 algH; putative transcriptional regulator D BPEN_154 dksA; dosage-dependent dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor C 03021 Transcription machinery [BR:bpn03021] D BPEN_223 rpoA; RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D BPEN_577 rpoB; DNA-directed RNA polymerase, beta-subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D BPEN_576 rpoC; DNA-directed RNA polymerase, beta-prime-subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D BPEN_642 rpoZ; DNA-directed RNA polymerase, subunit K/omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D BPEN_057 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor D BPEN_653 rpoH; RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor D BPEN_107 nusA; L factor K02600 nusA; transcription termination/antitermination protein NusA D BPEN_242 nusB; L factor K03625 nusB; transcription antitermination protein NusB D BPEN_582 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG D BPEN_154 dksA; dosage-dependent dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D BPEN_099 greA; transcription elongation factor K03624 greA; transcription elongation factor GreA D BPEN_607 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:bpn03019] D BPEN_422 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D BPEN_560 rnc; RNase III K03685 rnc; ribonuclease III [EC:3.1.26.3] D BPEN_077 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D BPEN_113 deaD; cold-shock DeaD box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D BPEN_162 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BPEN_112 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D BPEN_607 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D BPEN_624 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BPEN_118 dnaK; DnaK K04043 dnaK; molecular chaperone DnaK D BPEN_073 groEL; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BPEN_082 hfq; host factor I K03666 hfq; host factor-I protein D BPEN_272 ygdP; nucleotide hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D BPEN_175 csrA; carbon storage regulator K03563 csrA; carbon storage regulator C 03041 Spliceosome C 03011 Ribosome [BR:bpn03011] D BPEN_391 rpsA; 30S ribosomal subunit protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D BPEN_279 rpsB; 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D BPEN_204 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D BPEN_222 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D BPEN_215 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D BPEN_088 rpsF; 30S ribosomal subunit protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D BPEN_586 rpsG; 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D BPEN_212 rpsH; 30S ribosomal subunit protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D BPEN_051 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D BPEN_197 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D BPEN_221 rpsK; 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D BPEN_587 rpsL; 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D BPEN_220 rpsM; 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D BPEN_211 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D BPEN_111 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D BPEN_179 rpsP; 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D BPEN_207 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D BPEN_089 rpsR; 30S ribosomal subunit protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D BPEN_202 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D BPEN_120 rpsT; 30S ribosomal subunit protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D BPEN_059 rpsU; 30S ribosomal subunit protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D BPEN_580 rplA; 50S ribosomal subunit protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D BPEN_201 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D BPEN_198 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D BPEN_199 rplD; 50S ribosomal subunit protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D BPEN_210 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D BPEN_213 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D BPEN_090 rplI; 50S ribosomal subunit protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D BPEN_579 rplJ; 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D BPEN_581 rplK; 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D BPEN_578 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D BPEN_050 rplM; 50S ribosomal subunitprotein L13 K02871 RP-L13; large subunit ribosomal protein L13 D BPEN_208 rplN; 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D BPEN_217 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D BPEN_205 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D BPEN_224 rplQ; 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D BPEN_214 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D BPEN_182 rplS; 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D BPEN_365 rplT; 50S ribosomal subunit protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D BPEN_096 rplU; 50S ribosomal subunit protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D BPEN_203 rplV; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D BPEN_200 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D BPEN_209 rplX; 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D BPEN_097 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D BPEN_636 rpmB; 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D BPEN_206 rpmC; 50S ribosomal subunit protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D BPEN_621 rpmE; 50S ribosomal subunit protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D BPEN_420 rpmF; 50S ribosomal subunit protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D BPEN_635 rpmG; 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D BPEN_014 rmpH; 50S ribosomal subunit protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D BPEN_364 rpmI; 50S ribosomal subunit protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D BPEN_219 rmpJ; 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D BPEN_488 rplY; 50S ribosomal subunit protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D BPEN_229 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BPEN_572 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BPEN_574 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:bpn03009] D BPEN_560 rnc; RNase III K03685 rnc; ribonuclease III [EC:3.1.26.3] D BPEN_077 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D BPEN_098 cgtA; putative GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-] D BPEN_154 dksA; dosage-dependent dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D BPEN_107 nusA; L factor K02600 nusA; transcription termination/antitermination protein NusA D BPEN_242 nusB; L factor K03625 nusB; transcription antitermination protein NusB D BPEN_582 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG D BPEN_130 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D BPEN_655 yhhF; putative methyltransferase with SAM-dependent methyltransferase domain K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D BPEN_138 mraW; S-adenosyl-dependent methyl transferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D BPEN_053 yraL; conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D BPEN_087 rlmB; probable tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D BPEN_100 rrmJ; Ribosomal RNA large subunit (23S) methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D BPEN_552 yfgB; putative pyruvate formate lyase activating enzyme 2 K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D BPEN_421 rluC; ribosomal large subunit (23S) pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D BPEN_187 rluD; pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D BPEN_180 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM D BPEN_515 yfcB; N5-glutamine methyltransferase, modifies ribosomal protein L3 K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D BPEN_422 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D BPEN_257 yqgF; putative endonuclease involved in recombination K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D BPEN_113 deaD; cold-shock DeaD box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D BPEN_549 engA; putative GTP-binding protein K03977 engA; GTPase D BPEN_083 hflX; HflX K03665 hflX; GTPase D BPEN_227 yrdC; putative RNA-binding protein with unique protein fold, with YrdC/RibB domain K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D BPEN_109 rbfA; 30S ribosome-binding factor K02834 rbfA; ribosome-binding factor A D BPEN_318 ybeB; conserved hypothetical protein K09710 ybeB; ribosome-associated protein D BPEN_324 ybeY; conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor D BPEN_354 ychF; putative GTP-binding protein with nucleoside triP hydrolase domain K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:bpn03016] D BPEN_064 cca; tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D BPEN_521 gltX; glutamate tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BPEN_297 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D BPEN_122 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D BPEN_321 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BPEN_486 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BPEN_332 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D BPEN_468 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BPEN_270 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D BPEN_467 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BPEN_174 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D BPEN_433 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D BPEN_362 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D BPEN_395 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D BPEN_312 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D BPEN_033 valS; valine tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D BPEN_550 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D BPEN_366 pheS; phenylalanine tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D BPEN_367 pheT; phenylalanine tRNA synthetase, beta-subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D BPEN_382 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BPEN_589 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D BPEN_410 ycfF; putative protein kinase C inhibitor K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D BPEN_512 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D BPEN_110 truB; tRNA pseudouridine 5S synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D BPEN_554 nifS; putative L-cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D BPEN_227 yrdC; putative RNA-binding protein with unique protein fold, with YrdC/RibB domain K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D BPEN_081 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D BPEN_011 trmE; GTPase for tRNA modification and thiophene and furan oxidation K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D BPEN_001 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D BPEN_091 cysQ; CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D BPEN_013 rnpA; RNase P, protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D BPEN_054 rnpB; rnpB K01978 rnpB; M1 RNA D BPEN_379 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D BPEN_019 glyQ; glycine-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D BPEN_020 glyS; glycine-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D BPEN_557 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D BPEN_181 trmD; tRNA(guanine-N1)methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D BPEN_404 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D BPEN_430 yccK; putative sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D BPEN_268 ygfZ; putative aminomethyltransferase K06980 ygfZ; tRNA-modifying protein YgfZ D BPEN_236 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D BPEN_246 thiI; sulfur transfer protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D BPEN_296 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D BPEN_456 yeaZ; putative glycoprotein endopeptidase, actin-like ATPase domain K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D BPEN_060 gcp; putative O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D BPEN_079 yjeE; putative enzyme with nucleoside triP hydrolase domain K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D BPEN_112 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:bpn03012] D BPEN_108 infB; translation initiation factor IF2-2 K02519 infB; translation initiation factor IF-2 D BPEN_363 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D BPEN_280 tsf; protein chain elongation factor Ts K02357 tsf; elongation factor Ts D BPEN_584 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D BPEN_585 fusA; elongation factor G K02355 fusA; elongation factor G D BPEN_359 prfA; peptide chain release factor 1 (RF-1) K02835 prfA; peptide chain release factor 1 D BPEN_282 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D BPEN_360 hemK; N5-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D BPEN_355 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D BPEN_399 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D BPEN_074 efp; elongation factor P K02356 efp; elongation factor P D BPEN_269 prfB; peptide chain release factor 2 (RF-2) K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:bpn03110] D BPEN_188 clpB; ATP-dependent protease K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D BPEN_254 clpX; ATP-dependent Clp protease ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D BPEN_118 dnaK; DnaK K04043 dnaK; molecular chaperone DnaK D BPEN_073 groEL; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BPEN_119 dnaJ; DnaJ K03686 dnaJ; molecular chaperone DnaJ D BPEN_564 grpE; heat shock protein 24 K03687 GRPE; molecular chaperone GrpE D BPEN_017 ibpA; heat shock protein A K04080 ibpA; molecular chaperone IbpA D BPEN_072 groES; GroES K04078 groES; chaperonin GroES D BPEN_101 hflB; HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D BPEN_002 atpB; ATP synthase, F0 sector, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D BPEN_627 secB; molecular chaperone in protein export K03071 secB; preprotein translocase subunit SecB D BPEN_132 surA; peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D BPEN_608 trxA; thioredoxin 1, redox factor K03671 TXN; thioredoxin D BPEN_628 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3 D BPEN_378 ydhD; conserved protein with thioredoxin-like domain K07390 grxD; monothiol glutaredoxin D BPEN_646 dsbA; periplasmic protein disulfide isomerase I, disulfide bond formation K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D BPEN_452 dsbB; disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] C 04131 Membrane trafficking [BR:bpn04131] D BPEN_553 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D BPEN_451 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BPEN_352 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BPEN_465 pykA; pyruvate kinase A K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:bpn03032] D BPEN_231 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D BPEN_027 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D BPEN_058 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D BPEN_028 ssb; ssDNA-binding protein controls activity of RecBCD nuclease K03111 ssb; single-strand DNA-binding protein D BPEN_294 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BPEN_015 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BPEN_034 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D BPEN_319 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BPEN_412 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BPEN_232 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BPEN_309 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BPEN_114 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D BPEN_293 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D BPEN_645 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D BPEN_524 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D BPEN_492 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D BPEN_016 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] C 03036 Chromosome and associated proteins [BR:bpn03036] D BPEN_560 rnc; RNase III K03685 rnc; ribonuclease III [EC:3.1.26.3] D BPEN_448 hns; DNA-binding protein HLP-II (HU, BH2, HD, NS) K03746 hns; DNA-binding protein H-NS D BPEN_431 yccV; conserved hypothetical protein K11940 hspQ; heat shock protein HspQ D BPEN_082 hfq; host factor I K03666 hfq; host factor-I protein D BPEN_149 ftsA; cell division protein K03590 ftsA; cell division protein FtsA D BPEN_170 ygbQ; cell division protein K05589 ftsB; cell division protein FtsB D BPEN_140 ftsI; division-specific transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D BPEN_397 ftsK; cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D BPEN_139 ftsL; cell division protein K03586 ftsL; cell division protein FtsL D BPEN_148 ftsQ; cell division protein K03589 ftsQ; cell division protein FtsQ D BPEN_145 ftsW; cell division protein K03588 ftsW; cell division protein FtsW D BPEN_150 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ D BPEN_265 ygfE; conserved hypothetical protein K09888 zapA; cell division protein ZapA D BPEN_080 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D BPEN_453 minC; MinC K03610 minC; septum site-determining protein MinC D BPEN_454 minD; MinD K03609 minD; septum site-determining protein MinD D BPEN_455 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor D BPEN_302 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D BPEN_303 mreC; rod shape-determining protein K03570 mreC; rod shape-determining protein MreC D BPEN_304 mreD; rod shape-determining protein K03571 mreD; rod shape-determining protein MreD D BPEN_316 mrdB; rod shape-determining protein K05837 rodA; rod shape determining protein RodA D BPEN_001 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D BPEN_644 yihA; Probable GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:bpn03400] D BPEN_563 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D BPEN_256 mutY; adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D BPEN_383 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D BPEN_638 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D BPEN_449 xthA; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D BPEN_524 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D BPEN_645 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D BPEN_577 rpoB; DNA-directed RNA polymerase, beta-subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D BPEN_576 rpoC; DNA-directed RNA polymerase, beta-prime-subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D BPEN_223 rpoA; RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D BPEN_642 rpoZ; DNA-directed RNA polymerase, subunit K/omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D BPEN_476 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D BPEN_294 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BPEN_015 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BPEN_034 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D BPEN_319 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BPEN_412 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BPEN_232 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BPEN_309 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BPEN_114 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D BPEN_028 ssb; ssDNA-binding protein controls activity of RecBCD nuclease K03111 ssb; single-strand DNA-binding protein D BPEN_276 recB; exonuclease V K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D BPEN_274 recC; exonuclease V, gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D BPEN_275 recD; exonuclease V, alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D BPEN_492 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D BPEN_016 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D BPEN_448 hns; DNA-binding protein HLP-II (HU, BH2, HD, NS) K03746 hns; DNA-binding protein H-NS D BPEN_494 nrdA; ribonucleoside diphosphate reductase 1, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D BPEN_495 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:bpn03029] D BPEN_108 infB; translation initiation factor IF2-2 K02519 infB; translation initiation factor IF-2 D BPEN_363 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D BPEN_280 tsf; protein chain elongation factor Ts K02357 tsf; elongation factor Ts D BPEN_584 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D BPEN_585 fusA; elongation factor G K02355 fusA; elongation factor G D BPEN_382 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BPEN_321 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D BPEN_467 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BPEN_468 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BPEN_028 ssb; ssDNA-binding protein controls activity of RecBCD nuclease K03111 ssb; single-strand DNA-binding protein D BPEN_287 yaeT; outer membrane protein precursor K07277 SAM50; outer membrane protein insertion porin family D BPEN_118 dnaK; DnaK K04043 dnaK; molecular chaperone DnaK D BPEN_564 grpE; heat shock protein 24 K03687 GRPE; molecular chaperone GrpE D BPEN_073 groEL; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BPEN_072 groES; GroES K04078 groES; chaperonin GroES D BPEN_119 dnaJ; DnaJ K03686 dnaJ; molecular chaperone DnaJ D BPEN_554 nifS; putative L-cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D BPEN_378 ydhD; conserved protein with thioredoxin-like domain K07390 grxD; monothiol glutaredoxin D BPEN_248 cyoE; protohaeme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D BPEN_012 yidCD; putative protein K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:bpn02000] D BPEN_390 msbA; lipid transport protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D BPEN_531 cysP; thiosulfate transport protein (ABC superfamily, peri_bind) K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D BPEN_530 cysU; thiosulfate transport protein (ABC superfamily, membrane) K02046 cysU; sulfate/thiosulfate transport system permease protein D BPEN_529 cysW; thiosulfate permease W protein (ABC superfamily, membrane) K02047 cysW; sulfate/thiosulfate transport system permease protein D BPEN_528 cysA; sulfate permease A protein, chromate resistance (ABC superfamily, atp_bind) K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D BPEN_042 znuB; high-affinity Zn transport protein (ABC superfamily, membrane) K02075 ABC.ZM.P; zinc/manganese transport system permease protein D BPEN_041 znuC; high-affinity Zn transport protein (ABC superfamily, atp_bind) K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D BPEN_036 yjgP; putative transmembrane protein, transport K07091 lptF; lipopolysaccharide export system permease protein D BPEN_037 yjgQ; putative transmembrane protein, transport K11720 lptG; lipopolysaccharide export system permease protein D BPEN_043 yhbG; putative transport protein (ABC superfamily, atp_bind) K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D BPEN_408 lolC; transport protein of outer membrane lipoproteins (ABC superfamily, membrane) K09808 lolC_E; lipoprotein-releasing system permease protein D BPEN_406 lolE; transport protein of outer membrane lipoproteins (ABC superfamily, membrane) K09808 lolC_E; lipoprotein-releasing system permease protein D BPEN_407 lolD; transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D BPEN_371 sufC; putative transport protein associated with Fe-S cluster assembly (ABC superfamily, atp_bind) K09013 sufC; Fe-S cluster assembly ATP-binding protein D BPEN_470 yceL; putative membrane transporter (MFS family) K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein D BPEN_527 ptsI; PTS family enzyme I and Hpr components, PEP-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D BPEN_526 ptsH; PTS family Hpr protein, phosphohistidinoprotein-hexose phosphotransferase K02784 ptsH; phosphocarrier protein HPr D BPEN_459 manX; PTS family enzyme IIA/enzyme IIB, mannose-specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D BPEN_460 manY; PTS family enzyme IIC, mannose-specific K02795 manY; mannose PTS system EIIC component D BPEN_461 manZ; PTS family enzyme IID, mannose-specific K02796 manZ; mannose PTS system EIID component D BPEN_075 yjeP; putative membrane protein K22051 mscM; miniconductance mechanosensitive channel D BPEN_345 tolQ; TolQ K03562 tolQ; biopolymer transport protein TolQ D BPEN_346 tolR; TolR K03560 tolR; biopolymer transport protein TolR D BPEN_597 corA; Mg2+/Ni2+/Co2+ transport protein (Mg transport system I) (MIT family) K03284 corA; magnesium transporter D BPEN_491 omp; outer membrane protein K09475 ompC; outer membrane pore protein C D BPEN_400 oprC; OprC K02014 TC.FEV.OM; iron complex outermembrane recepter protein D BPEN_287 yaeT; outer membrane protein precursor K07277 SAM50; outer membrane protein insertion porin family D BPEN_186 yfiO; putative lipoprotein K05807 bamD; outer membrane protein assembly factor BamD D BPEN_566 smpA; small membrane protein A K06186 bamE; outer membrane protein assembly factor BamE D BPEN_092 ytfM; putative outer membrane protein K07278 tamA; translocation and assembly module TamA D BPEN_093 ytfN; putative exported protein K09800 tamB; translocation and assembly module TamB D BPEN_044 yhbN; putative transport protein (ABC superfamily, peri_bind) K09774 lptA; lipopolysaccharide export system protein LptA D BPEN_045 yrbK; possible exported protein K11719 lptC; lipopolysaccharide export system protein LptC D BPEN_133 imp; organic solvent tolerance protein precursor K04744 lptD; LPS-assembly protein D BPEN_320 rlpB; rare lipoprotein B precursor K03643 lptE; LPS-assembly lipoprotein D BPEN_323 ybeX; putative integral membrane protein with CBS regulatory domain K06189 corC; hemolysin (HlyC) family protein D BPEN_570 emrE; auxillary multidrug transport protein (SMR family) K03297 emrE; small multidrug resistance pump D BPEN_024 pitA; low-affinity phosphate transport protein (PiT family) K16322 pit; low-affinity inorganic phosphate transporter D BPEN_030 gltP; glutamate:aspartate symporter (DAACS family) K11102 gltP; proton glutamate symport protein D BPEN_029 yjcE; putative sodium:hydrogen antiporter (CPA1 family) K24163 nhaK; monovalent cation/hydrogen antiporter D BPEN_519 nupC; nucleoside transport protein (NUP family) K11535 nupC; nucleoside transport protein D BPEN_518 mntH; manganese/divalent cation transport protein (NRAMP family) K03322 mntH; manganese transport protein D BPEN_469 mviN; putative virulence factor K03980 murJ; putative peptidoglycan lipid II flippase D BPEN_145 ftsW; cell division protein K03588 ftsW; cell division protein FtsW D BPEN_445 tonB; energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins K03832 tonB; periplasmic protein TonB D BPEN_349 pal; Pal K03640 pal; peptidoglycan-associated lipoprotein D BPEN_347 tolA; TolA K03646 tolA; colicin import membrane protein D BPEN_348 tolB; TolB K03641 tolB; TolB protein C 02044 Secretion system [BR:bpn02044] D BPEN_152 secA; preprotein translocase, ATPase secretion component K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BPEN_627 secB; molecular chaperone in protein export K03071 secB; preprotein translocase subunit SecB D BPEN_238 secD; preprotein translocase, auxillary membrane component K03072 secD; preprotein translocase subunit SecD D BPEN_583 secE; preprotein translocase, membrane component K03073 secE; preprotein translocase subunit SecE D BPEN_239 secF; preprotein translocase, auxillary membrane component K03074 secF; preprotein translocase subunit SecF D BPEN_104 secG; preprotein translocase, membrane component K03075 secG; preprotein translocase subunit SecG D BPEN_218 secY; preprotein translocase, membrane component K03076 secY; preprotein translocase subunit SecY D BPEN_178 ffh; 4.5S-RNP protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D BPEN_654 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor D BPEN_237 yajC; preprotein translocase, auxillary membrane component K03210 yajC; preprotein translocase subunit YajC D BPEN_012 yidCD; putative protein K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins C 02022 Two-component system C 02035 Bacterial motility proteins C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:bpn04812] D BPEN_302 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D BPEN_150 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ D BPEN_149 ftsA; cell division protein K03590 ftsA; cell division protein FtsA D BPEN_453 minC; MinC K03610 minC; septum site-determining protein MinC D BPEN_454 minD; MinD K03609 minD; septum site-determining protein MinD D BPEN_455 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor C 04147 Exosome [BR:bpn04147] D BPEN_162 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BPEN_451 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BPEN_261 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D BPEN_465 pykA; pyruvate kinase A K00873 PK; pyruvate kinase [EC:2.7.1.40] D BPEN_235 ahpC; alkyl hydroperoxide reductase C22 protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D BPEN_073 groEL; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BPEN_118 dnaK; DnaK K04043 dnaK; molecular chaperone DnaK D BPEN_656 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BPEN_547 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D BPEN_584 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D BPEN_410 ycfF; putative protein kinase C inhibitor K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D BPEN_310 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D BPEN_308 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D BPEN_643 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BPEN_575 purH; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D BPEN_156 lpdA; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BPEN_464 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D BPEN_623 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BPEN_352 gpmA; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:bpn02048] D BPEN_150 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ D BPEN_302 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D BPEN_521 gltX; glutamate tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D BPEN_554 nifS; putative L-cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:bpn03100] D BPEN_520 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BPEN_617 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BPEN_606 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BPEN_177 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BPEN_314 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BPEN_517 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BPEN_473 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BPEN_616 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D BPEN_426 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D BPEN_327 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D BPEN_573 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D BPEN_078 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BPEN_605 tRNA-His K14226 tRNA-His; tRNA His D BPEN_658 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D BPEN_105 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BPEN_039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BPEN_604 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BPEN_425 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BPEN_328 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BPEN_523 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BPEN_428 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BPEN_329 tRNA-Met K14230 tRNA-Met; tRNA Met D BPEN_056 tRNA-Met K14230 tRNA-Met; tRNA Met D BPEN_106 tRNA-Met K14230 tRNA-Met; tRNA Met D BPEN_070 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D BPEN_603 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BPEN_489 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BPEN_022 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BPEN_176 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BPEN_429 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BPEN_471 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BPEN_472 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BPEN_192 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BPEN_195 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BPEN_234 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BPEN_615 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D BPEN_193 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D BPEN_376 tRNA-Val K14237 tRNA-Val; tRNA Val D BPEN_522 tRNA-Val K14237 tRNA-Val; tRNA Val D BPEN_572 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BPEN_574 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BPEN_229 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BPEN_054 rnpB; rnpB K01978 rnpB; M1 RNA D BPEN_569 tmRNA; ortholog to E. coli bnum: b2621; MultiFun: Cell structure 6.6; Information transfer 2.2.6, 2.3.6 K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D BPEN_537 bcp; bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D BPEN_622 fpr; ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D BPEN_322 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D BPEN_273 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D BPEN_411 ycfH; putative metallo-dependent hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D BPEN_334 ybfF; putative enzyme with alpha/beta-Hydrolase domain K01175 ybfF; esterase [EC:3.1.-.-] D BPEN_226 def; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D BPEN_031 yjgF; putative translation initiation inhibitor K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D BPEN_474 gutQ; putative phosphosugar binding protein K02467 gutQ; arabinose 5-phosphate isomerase [EC:5.3.1.13] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D BPEN_496 yfaE; conserved hypothetical protein with 2Fe-2S ferredoxin-like domain K11107 yfaE; ferredoxin D BPEN_333 fldA; flavodoxin 1 K03839 fldA; flavodoxin I C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism D BPEN_648 ubiB; 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway K03688 ubiB; ubiquinone biosynthesis protein C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D BPEN_462 cspC; cold shock-like protein K03704 cspA; cold shock protein C 99974 Translation C 99975 Protein processing D BPEN_541 ureF; putative urease accessory protein F K03188 ureF; urease accessory protein D BPEN_540 ureG; putative urease accessory protein G K03189 ureG; urease accessory protein D BPEN_545 ureD; putative urease accessory protein D K03190 ureD; urease accessory protein D BPEN_568 smpB; small protein B; putative tmRNA-binding protein K03664 smpB; SsrA-binding protein D BPEN_593 gntY; membrane-bound protein in GNT I transport system K07400 nfuA; Fe/S biogenesis protein NfuA C 99976 Replication and repair D BPEN_650 yigN; putative membrane protein K09760 rmuC; DNA recombination protein RmuC C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport C 99978 Cell growth C 99993 Cell motility D BPEN_409 ycfM; putative fibronectin-binding protein K07337 K07337; penicillin-binding protein activator C 99995 Signaling proteins D BPEN_325 phoL; putative ATP-binding protein in pho regulon K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D BPEN_396 lolA; LolA K03634 lolA; outer membrane lipoprotein carrier protein D BPEN_358 lolB; outer membrane lipoprotein precursor K02494 lolB; outer membrane lipoprotein LolB D BPEN_288 hlpA; histone-like protein K06142 hlpA; outer membrane protein D BPEN_173 nlpD; lipoprotein NlpD precursor K06194 nlpD; lipoprotein NlpD C 99994 Others D BPEN_071 cutA; periplasmic divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein B B 09194 Poorly characterized C 99996 General function prediction only D BPEN_160 yadR; conserved hypothetical protein K15724 erpA; iron-sulfur cluster insertion protein D BPEN_369 sufA; Fe-S cluster assembly protein K05997 sufA; Fe-S cluster assembly protein SufA D BPEN_370 sufB; putative transport protein associated with Fe-S cluster assembly K09014 sufB; Fe-S cluster assembly protein SufB D BPEN_372 sufD; SufD K09015 sufD; Fe-S cluster assembly protein SufD D BPEN_374 sufE; SufE K02426 sufE; cysteine desulfuration protein SufE C 99997 Function unknown D BPEN_353 ybhL; putative transport protein K06890 K06890; uncharacterized protein D BPEN_388 ycaR; conserved hypothetical protein K09791 K09791; uncharacterized protein D BPEN_475 yeeX; conserved hypothetical protein K09802 K09802; uncharacterized protein D BPEN_049 yhcB; conserved hypothetical protein K09908 K09908; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 16, 2024