+D GENES KO
#
KEGG Orthology (KO) - Bacillus pumilus SH-B9
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:bpus00010]
D UP12_11250 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D UP12_14790 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D UP12_13110 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D UP12_17310 glpX; fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D UP12_17325 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D UP12_15920 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D UP12_15930 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D UP12_13040 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D UP12_15925 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D UP12_04565 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D UP12_15915 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D UP12_15910 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UP12_13105 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D UP12_07060 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D UP12_07065 2-oxoisovalerate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D UP12_02610 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D UP12_06225 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D UP12_07070 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D UP12_07075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_02615 acoL; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_06230 acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_10895 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_01715 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D UP12_01515 dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D UP12_02860 alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D UP12_17720 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09105 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09505 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_13310 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UP12_13395 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UP12_09120 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UP12_04805 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D UP12_13745 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D UP12_17985 diacetylchitobiose-6-phosphate hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D UP12_03680 diacetylchitobiose-6-phosphate hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D UP12_18280 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D UP12_01385 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D UP12_10765 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D UP12_18620 beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D UP12_18715 aryl-phospho-beta-D-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D UP12_18155 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D UP12_09970 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D UP12_06700 PTS system glucose-specific transporter subunit IICBA K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:bpus00020]
D UP12_09460 citrate synthase 3 K01647 CS; citrate synthase [EC:2.3.3.1]
D UP12_13085 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D UP12_08750 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D UP12_13080 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D UP12_09530 2-oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D UP12_09525 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D UP12_07075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_02615 acoL; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_06230 acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_10895 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_07840 succinyl-CoA synthetase subsunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D UP12_07835 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D UP12_12820 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D UP12_12815 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D UP12_12825 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D UP12_15515 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D UP12_13075 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D UP12_07190 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D UP12_13745 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D UP12_07060 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D UP12_07065 2-oxoisovalerate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D UP12_02610 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D UP12_06225 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D UP12_07070 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:bpus00030]
D UP12_14790 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D UP12_10755 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D UP12_13645 hypothetical protein K19243 azf; NAD+ dependent glucose-6-phosphate dehydrogenase [EC:1.1.1.388]
D UP12_12440 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D UP12_10795 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D UP12_07690 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D UP12_08700 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D UP12_17320 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D UP12_17235 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D UP12_11780 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D UP12_11775 6-phospho 3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D UP12_18375 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D UP12_16890 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D UP12_10575 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D UP12_04805 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D UP12_00320 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D UP12_16790 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D UP12_01615 sugar dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D UP12_10785 sugar dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D UP12_16175 bifunctional glyoxylate/hydroxypyruvate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D UP12_18465 gluconokinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D UP12_16795 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D UP12_17325 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D UP12_17310 glpX; fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D UP12_13110 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:bpus00040]
D UP12_09270 pectin esterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D UP12_18040 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D UP12_16805 5-keto-4-deoxyuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D UP12_16810 3-ketoacyl-ACP reductase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D UP12_15610 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D UP12_15600 altronate oxidoreductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D UP12_15595 altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D UP12_18160 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D UP12_16950 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D UP12_16650 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D UP12_16700 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D UP12_11755 araD; ribulose 5-phosphate epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D UP12_07690 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D UP12_11750 arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D UP12_09360 xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D UP12_09365 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D UP12_06210 L-iditol 2-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
C 00051 Fructose and mannose metabolism [PATH:bpus00051]
D UP12_08105 glycoside hydrolase K19355 MAN; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D UP12_01410 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D UP12_15690 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D UP12_16750 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D UP12_13110 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D UP12_17310 glpX; fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D UP12_02210 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D UP12_06970 phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D UP12_06210 L-iditol 2-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D UP12_09365 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D UP12_17325 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D UP12_15920 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D UP12_17235 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D UP12_09020 allulose-6-phosphate 3-epimerase K17195 alsE; D-allulose-6-phosphate 3-epimerase [EC:5.1.3.-]
D UP12_09065 PTS fructose transporter subunit IIBC K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D UP12_01430 PTS glucose transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D UP12_01425 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D UP12_09070 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D UP12_01420 FruA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D UP12_06975 PTS fructose transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D UP12_02205 PTS mannitol transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D UP12_02200 PTS system mannitol-specific transporter subunit IIBC K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D UP12_07465 PTS sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D UP12_07460 PTS sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D UP12_07455 PTS sorbitol transporter subunit IIC K02783 srlA; glucitol/sorbitol PTS system EIIC component
C 00052 Galactose metabolism [PATH:bpus00052]
D UP12_17835 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D UP12_17825 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D UP12_17830 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D UP12_16645 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D UP12_16700 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D UP12_04805 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D UP12_11250 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D UP12_18535 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D UP12_08995 alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D UP12_06190 PTS lichenan transporter subunit IIC K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D UP12_06200 PTS galactitol transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D UP12_06195 gatC; PTS system galactitol-specific transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D UP12_13110 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D UP12_09060 kbaY; tagatose-bisphosphate aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D UP12_17750 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism [PATH:bpus00053]
D UP12_16950 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D UP12_16650 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D UP12_09030 PTS lactose transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D UP12_09025 PTS beta-glucoside transporter subunit IIBC K03475 ulaA; ascorbate PTS system EIIC component
D UP12_11755 araD; ribulose 5-phosphate epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D UP12_17720 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09105 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09505 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:bpus00500]
D UP12_17755 PTS system sucrose-specific transporter subuits IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D UP12_01010 PTS sugar transporter subunit IIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D UP12_17750 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D UP12_16700 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D UP12_08090 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D UP12_17990 PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D UP12_18145 PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D UP12_10775 PTS dihydroxyacetone transporter K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D UP12_18000 PTS mannose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D UP12_18150 PTS cellobiose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D UP12_10780 PTS mannose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D UP12_17995 oligo-beta-mannoside permease IIC protein K02761 celB; cellobiose PTS system EIIC component
D UP12_18165 PTS lactose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D UP12_10770 oligo-beta-mannoside permease IIC protein K02761 celB; cellobiose PTS system EIIC component
D UP12_17985 diacetylchitobiose-6-phosphate hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D UP12_03680 diacetylchitobiose-6-phosphate hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D UP12_18280 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D UP12_01385 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D UP12_10765 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D UP12_18620 beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D UP12_18715 aryl-phospho-beta-D-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D UP12_18155 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D UP12_03715 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D UP12_09970 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D UP12_03645 PTS alpha-glucoside transporter subunit IIBC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D UP12_03650 6-phospho-alpha-glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122]
D UP12_03955 trehalose permease IIC protein K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D UP12_03960 trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D UP12_04805 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D UP12_11250 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D UP12_14790 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D UP12_01410 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D UP12_15690 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bpus00520]
D UP12_01000 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D UP12_09970 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D UP12_03915 PTS sugar transporter K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D UP12_16330 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D UP12_16335 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D UP12_01410 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D UP12_15690 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D UP12_01080 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D UP12_01075 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D UP12_00315 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D UP12_01020 murQ; N-acetylmuramic acid-6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D UP12_17155 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D UP12_17315 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D UP12_07385 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D UP12_16695 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D UP12_12850 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D UP12_08985 arabinoxylan arabinofuranohydrolase K15921 xynD; arabinoxylan arabinofuranohydrolase [EC:3.2.1.55]
D UP12_09375 beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D UP12_06700 PTS system glucose-specific transporter subunit IICBA K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D UP12_11250 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D UP12_04805 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D UP12_16700 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D UP12_16950 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D UP12_16650 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D UP12_17835 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D UP12_17825 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D UP12_17830 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D UP12_16645 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D UP12_14790 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D UP12_16750 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D UP12_03715 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D UP12_03720 sugar dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
C 00620 Pyruvate metabolism [PATH:bpus00620]
D UP12_13310 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UP12_13395 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UP12_09120 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UP12_07060 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D UP12_07065 2-oxoisovalerate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D UP12_02610 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D UP12_06225 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D UP12_07070 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D UP12_07075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_02615 acoL; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_06230 acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_10895 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_01515 dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D UP12_02860 alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D UP12_13195 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D UP12_17580 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D UP12_13105 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D UP12_05950 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D UP12_13115 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D UP12_09140 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D UP12_11005 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D UP12_09145 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D UP12_11000 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D UP12_13120 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D UP12_03900 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D UP12_17720 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09105 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09505 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_02390 thiamine pyrophosphate-binding protein K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D UP12_01715 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D UP12_15685 glyoxal reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D UP12_01350 glyoxal reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D UP12_13630 glyoxal reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D UP12_17920 hypothetical protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D UP12_02235 glyoxalase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D UP12_11220 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D UP12_16175 bifunctional glyoxylate/hydroxypyruvate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D UP12_13485 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D UP12_17290 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D UP12_13125 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D UP12_07190 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D UP12_13075 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D UP12_15515 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D UP12_13745 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D UP12_11955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_17395 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_12415 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bpus00630]
D UP12_13310 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UP12_13395 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UP12_09120 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UP12_13075 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D UP12_09460 citrate synthase 3 K01647 CS; citrate synthase [EC:2.3.3.1]
D UP12_13085 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D UP12_08750 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D UP12_11955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_17395 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_10835 glyoxalase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D UP12_10830 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D UP12_09190 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D UP12_09195 glycolate oxidase K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D UP12_04835 catalase K03781 katE; catalase [EC:1.11.1.6]
D UP12_19060 catalase K03781 katE; catalase [EC:1.11.1.6]
D UP12_15195 2-ketogluconate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D UP12_16175 bifunctional glyoxylate/hydroxypyruvate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D UP12_08500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UP12_17225 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D UP12_11110 glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D UP12_11105 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D UP12_11115 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D UP12_07075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_02615 acoL; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_06230 acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_10895 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_15440 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D UP12_18260 garR; tartronate semialdehyde reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D UP12_18570 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D UP12_02350 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D UP12_16790 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D UP12_04340 oxalate decarboxylase K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2]
D UP12_15270 oxalate decarboxylase K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2]
D UP12_06370 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:bpus00640]
D UP12_13310 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UP12_13395 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UP12_09120 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UP12_13195 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D UP12_17580 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D UP12_10890 2-oxoisovalerate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D UP12_10885 2-oxoisovalerate dehydrogenase K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D UP12_10880 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D UP12_07075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_02615 acoL; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_06230 acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_10895 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_05940 NADPH:quinone reductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D UP12_05950 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D UP12_13115 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D UP12_09140 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D UP12_11005 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D UP12_09145 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D UP12_11000 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D UP12_13120 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D UP12_02170 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D UP12_10830 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D UP12_10835 glyoxalase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D UP12_07835 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D UP12_07840 succinyl-CoA synthetase subsunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D UP12_08990 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D UP12_09455 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D UP12_09450 methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D UP12_01715 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D UP12_10080 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D UP12_15685 glyoxal reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D UP12_01350 glyoxal reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D UP12_13630 glyoxal reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
C 00650 Butanoate metabolism [PATH:bpus00650]
D UP12_11955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_17395 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_03510 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D UP12_17390 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D UP12_15460 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D UP12_09130 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D UP12_03415 CoA-transferase K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D UP12_03420 CoA-transferase K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D UP12_10900 butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D UP12_10910 phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D UP12_02350 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D UP12_12820 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D UP12_12815 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D UP12_12825 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D UP12_02170 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D UP12_02180 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D UP12_09135 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D UP12_12430 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D UP12_16925 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D UP12_01820 acetohydroxyacid synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D UP12_12425 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D UP12_16930 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D UP12_11840 butanediol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism [PATH:bpus00660]
D UP12_12430 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D UP12_16925 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D UP12_01820 acetohydroxyacid synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D UP12_12425 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D UP12_16930 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D UP12_07835 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D UP12_07840 succinyl-CoA synthetase subsunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D UP12_17570 S-adenosylmethionine: 2-demethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D UP12_12405 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D UP12_12400 isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D UP12_12410 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:bpus00562]
D UP12_07110 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D UP12_14710 oxidoreductase K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D UP12_18440 oxidoreductase K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D UP12_08990 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D UP12_15920 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:bpus00190]
D UP12_15120 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D UP12_15155 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D UP12_12820 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D UP12_12815 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D UP12_12825 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D UP12_10120 menaquinol-cytochrome C reductase K03886 qcrA; quinol---cytochrome c reductase iron-sulfur subunit, bacillus type [EC:7.1.1.8]
D UP12_10115 cytochrome b6 K03887 qcrB; quinol---cytochrome c reductase cytochrome b subunit, bacillus type [EC:7.1.1.8]
D UP12_10110 cytochrome Cbb3 K03888 qcrC; quinol---cytochrome c reductase cytochrome c subunit, bacillus type [EC:7.1.1.8]
D UP12_07205 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D UP12_07225 cytochrome B6 K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D UP12_07220 cytochrome B oxidoreductase K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D UP12_07215 quinol oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D UP12_07210 cytochrome B K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D UP12_07200 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D UP12_17800 quinol oxidase subunit 4 K02829 qoxD; cytochrome aa3-600 menaquinol oxidase subunit IV [EC:7.1.1.5]
D UP12_17805 cytochrome o ubiquinol oxidase subunit III K02828 qoxC; cytochrome aa3-600 menaquinol oxidase subunit III [EC:7.1.1.5]
D UP12_17810 quinol oxidase subunit 1 K02827 qoxB; cytochrome aa3-600 menaquinol oxidase subunit I [EC:7.1.1.5]
D UP12_17815 quinol oxidase subunit 2 K02826 qoxA; cytochrome aa3-600 menaquinol oxidase subunit II [EC:7.1.1.5]
D UP12_18060 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D UP12_13870 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D UP12_18055 cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D UP12_13875 membrane protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D UP12_17190 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D UP12_17180 ATP F0F1 synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D UP12_17185 ATP synthase F0F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D UP12_17195 ATP synthase F0F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D UP12_17175 ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D UP12_17210 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D UP12_17200 ATP synthase F0F1 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D UP12_17205 ATP synthase F0F1 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D UP12_19040 inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D UP12_16310 pyrophosphatase K06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:bpus00710]
D UP12_15925 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D UP12_15930 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D UP12_13040 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D UP12_17325 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D UP12_17310 glpX; fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D UP12_08700 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D UP12_17235 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D UP12_15920 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D UP12_07690 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D UP12_17320 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D UP12_13745 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D UP12_13075 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:bpus00720]
D UP12_07190 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D UP12_13075 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D UP12_15515 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D UP12_12820 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D UP12_12815 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D UP12_12825 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D UP12_07840 succinyl-CoA synthetase subsunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D UP12_07835 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D UP12_11955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_17395 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_13080 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D UP12_08750 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D UP12_05950 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D UP12_13115 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D UP12_09140 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D UP12_11005 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D UP12_09145 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D UP12_11000 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D UP12_13120 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D UP12_10835 glyoxalase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D UP12_09830 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D UP12_10985 5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D UP12_17580 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D UP12_13195 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D UP12_13310 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UP12_13395 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UP12_09120 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:bpus00680]
D UP12_11870 aldehyde dismutase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D UP12_01515 dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D UP12_17225 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D UP12_15910 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UP12_13075 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D UP12_17325 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D UP12_17310 glpX; fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D UP12_13110 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D UP12_11775 6-phospho 3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D UP12_11780 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D UP12_13195 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D UP12_17580 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D UP12_13310 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UP12_13395 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UP12_09120 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UP12_04565 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D UP12_15915 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D UP12_10375 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D UP12_05105 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D UP12_12990 haloacid dehalogenase K25528 ysaA; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:bpus00910]
D UP12_09285 nitrite reductase K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D UP12_09280 nitrite reductase K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D UP12_14750 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D UP12_10325 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D UP12_18020 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D UP12_08500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UP12_09295 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D UP12_09290 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D UP12_16170 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D UP12_13850 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:bpus00920]
D UP12_07590 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D UP12_07595 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D UP12_13150 oligoribonuclease K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D UP12_07580 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D UP12_09110 sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D UP12_09115 sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D UP12_03925 Crp/Fnr family transcriptional regulator K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D UP12_00615 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D UP12_05445 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D UP12_13525 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D UP12_00440 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D UP12_09835 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D UP12_05925 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D UP12_11885 cystathionine gamma-synthase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:bpus00061]
D UP12_05950 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D UP12_13115 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D UP12_09140 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D UP12_11005 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D UP12_09145 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D UP12_11000 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D UP12_13120 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D UP12_07755 acyl carrier protein K02078 acpP; acyl carrier protein
D UP12_07745 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D UP12_05640 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D UP12_05645 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D UP12_01265 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D UP12_06240 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_08265 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_07750 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_13170 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_06730 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_06235 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_16990 hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D UP12_05845 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D UP12_04370 enoyl-ACP reductase K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D UP12_12875 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D UP12_05195 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:bpus00071]
D UP12_11955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_17395 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_15455 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D UP12_15460 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D UP12_12865 enoyl-CoA hydratase K13767 fadB; enoyl-CoA hydratase [EC:4.2.1.17]
D UP12_12875 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D UP12_05195 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D UP12_01515 dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D UP12_17720 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09105 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09505 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_08650 NADPH--cytochrome P450 reductase K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:bpus00561]
D UP12_18570 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D UP12_17720 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09105 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09505 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_02860 alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D UP12_04795 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D UP12_07740 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D UP12_08785 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D UP12_04880 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D UP12_03605 lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D UP12_13385 esterase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D UP12_09840 diacylglycerol glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D UP12_04590 glycerol phosphate lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D UP12_03935 glycerol phosphate lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D UP12_15670 hypothetical protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D UP12_11245 hypothetical protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D UP12_08995 alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:bpus00564]
D UP12_10255 gpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D UP12_04800 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D UP12_08785 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D UP12_04880 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D UP12_16730 glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D UP12_03605 lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D UP12_13725 phospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D UP12_01225 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D UP12_10925 hypothetical protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D UP12_08065 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D UP12_08285 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D UP12_05740 cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D UP12_17405 acyl-CoA dehydrogenase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D UP12_17430 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D UP12_09085 phospholipase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D UP12_03465 heptaprenylglyceryl phosphate synthase K07094 pcrB; heptaprenylglyceryl phosphate synthase [EC:2.5.1.-]
D UP12_16305 acetyltransferase K24872 yvoF; heptaprenylglycerol acetyltransferase [EC:2.3.1.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:bpus00600]
D UP12_08995 alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:bpus00592]
D UP12_15455 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:bpus00230]
D UP12_10620 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D UP12_10575 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D UP12_04805 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D UP12_00320 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D UP12_03370 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D UP12_03390 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D UP12_03380 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D UP12_03365 phosphoribosylformylglycinamidine synthase K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D UP12_03355 phosphoribosylformylglycinamidine synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D UP12_03360 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D UP12_03375 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D UP12_03340 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D UP12_03335 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D UP12_03350 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D UP12_03345 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D UP12_03385 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D UP12_12085 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D UP12_15255 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D UP12_10570 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D UP12_09635 purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D UP12_07480 laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D UP12_00415 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D UP12_00070 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D UP12_10205 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D UP12_12515 nucleoside-triphosphate diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D UP12_09920 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D UP12_03270 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D UP12_06410 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D UP12_07635 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D UP12_08460 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D UP12_08465 ribonucleotide-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D UP12_00115 deoxyguanosine kinase K15518 dgk; deoxyguanosine kinase [EC:2.7.1.113]
D UP12_12080 (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D UP12_05785 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D UP12_17945 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D UP12_18935 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D UP12_00110 deoxycytidine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D UP12_07025 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D UP12_03435 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D UP12_03975 cpdB; 2', 3'-cyclic nucleotide 2'-phosphodiesterase K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5]
D UP12_08305 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D UP12_00830 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D UP12_07595 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D UP12_07590 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D UP12_15280 aminotransferase V K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
C 00240 Pyrimidine metabolism [PATH:bpus00240]
D UP12_05590 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D UP12_07555 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D UP12_05585 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D UP12_07550 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D UP12_07540 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D UP12_07545 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D UP12_07565 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D UP12_07560 dihydroorotate dehydrogenase K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D UP12_07575 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D UP12_07570 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D UP12_08050 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D UP12_10205 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D UP12_12295 septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D UP12_17340 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D UP12_10290 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D UP12_11930 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D UP12_15255 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D UP12_03975 cpdB; 2', 3'-cyclic nucleotide 2'-phosphodiesterase K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5]
D UP12_17220 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D UP12_07530 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D UP12_08305 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D UP12_18365 deoA; thymidine phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D UP12_11475 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D UP12_08460 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D UP12_08465 ribonucleotide-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D UP12_00110 deoxycytidine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D UP12_11620 competence protein ComE K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D UP12_00205 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D UP12_17295 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D UP12_09785 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:bpus00250]
D UP12_12205 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D UP12_06030 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D UP12_18205 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D UP12_02925 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D UP12_13735 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D UP12_05400 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D UP12_01880 nitrilase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D UP12_15080 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D UP12_18200 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D UP12_15755 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D UP12_13185 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D UP12_13180 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D UP12_18935 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D UP12_03345 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D UP12_07540 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D UP12_02170 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D UP12_02180 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D UP12_09295 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D UP12_09290 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D UP12_10325 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D UP12_18020 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D UP12_01905 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D UP12_08500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UP12_05590 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D UP12_07555 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D UP12_05585 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D UP12_07550 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D UP12_07175 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D UP12_01550 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D UP12_03360 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D UP12_01080 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D UP12_03370 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:bpus00260]
D UP12_08200 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D UP12_12835 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D UP12_02140 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D UP12_08195 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D UP12_15190 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D UP12_15180 serine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D UP12_08880 pyridoxal-5'-phosphate-dependent protein subunit beta K01733 thrC; threonine synthase [EC:4.2.3.1]
D UP12_15185 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D UP12_17225 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D UP12_16175 bifunctional glyoxylate/hydroxypyruvate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D UP12_18570 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D UP12_04565 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D UP12_15915 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D UP12_10375 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D UP12_05105 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D UP12_12990 haloacid dehalogenase K25528 ysaA; phosphoserine phosphatase [EC:3.1.3.3]
D UP12_08330 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D UP12_08325 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D UP12_11110 glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D UP12_11105 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D UP12_11115 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D UP12_07075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_02615 acoL; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_06230 acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_10895 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_15440 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D UP12_14100 alcohol dehydrogenase K11440 gbsB; choline dehydrogenase [EC:1.1.1.1]
D UP12_14105 betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D UP12_11885 cystathionine gamma-synthase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D UP12_07720 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D UP12_07725 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D UP12_09760 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D UP12_10155 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D UP12_10160 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D UP12_05450 2,4-diaminobutyrate 4-aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D UP12_05455 2,4-diaminobutyrate decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
D UP12_03940 2,4-diaminobutyrate decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:bpus00270]
D UP12_00615 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D UP12_05445 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D UP12_13525 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D UP12_00440 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D UP12_11885 cystathionine gamma-synthase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D UP12_05930 cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D UP12_14835 cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D UP12_11890 cysteine synthase K17216 mccA; cystathionine beta-synthase (O-acetyl-L-serine) [EC:2.5.1.134]
D UP12_01455 mmuM; homocysteine methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D UP12_05485 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D UP12_05490 homocysteine methyltransferase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D UP12_06415 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D UP12_13740 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D UP12_13035 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D UP12_17460 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D UP12_11895 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D UP12_06560 mtnK; methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D UP12_07480 laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D UP12_13290 hypothetical protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D UP12_06555 mtnA; methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D UP12_06580 mtnB; methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D UP12_06570 mtnW; 2,3-diketo-5-methylthiopentyl-1-phosphate enolase K08965 mtnW; 2,3-diketo-5-methylthiopentyl-1-phosphate enolase [EC:5.3.2.5]
D UP12_06575 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87]
D UP12_06585 acireductone dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D UP12_06565 aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D UP12_13355 histidine kinase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D UP12_19520 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D UP12_12740 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D UP12_11900 SAM-dependent methyltransferase K17462 yrrT; putative AdoMet-dependent methyltransferase [EC:2.1.1.-]
D UP12_13840 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D UP12_08200 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D UP12_12835 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D UP12_02140 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D UP12_08195 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D UP12_15190 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D UP12_09835 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D UP12_05925 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D UP12_04600 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D UP12_17970 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D UP12_12435 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D UP12_01715 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D UP12_13075 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D UP12_07720 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D UP12_07725 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D UP12_10375 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D UP12_05105 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:bpus00280]
D UP12_17970 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D UP12_12435 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D UP12_10905 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D UP12_10890 2-oxoisovalerate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D UP12_10885 2-oxoisovalerate dehydrogenase K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D UP12_10880 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D UP12_07075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_02615 acoL; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_06230 acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_10895 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_15455 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D UP12_10830 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D UP12_10835 glyoxalase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D UP12_06735 oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D UP12_08990 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D UP12_17720 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09105 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09505 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_02170 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D UP12_09135 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D UP12_11955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_17395 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:bpus00290]
D UP12_09760 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D UP12_12405 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D UP12_12400 isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D UP12_12410 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D UP12_12430 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D UP12_16925 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D UP12_01820 acetohydroxyacid synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D UP12_12425 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D UP12_12420 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D UP12_09810 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D UP12_17970 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D UP12_12435 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D UP12_10905 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D UP12_12415 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:bpus00300]
D UP12_15190 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D UP12_08200 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D UP12_12835 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D UP12_02140 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D UP12_08195 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D UP12_05975 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D UP12_08205 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D UP12_01855 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D UP12_10085 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D UP12_05580 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D UP12_13535 dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D UP12_15145 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D UP12_10510 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D UP12_06870 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D UP12_06755 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D UP12_06875 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D UP12_07360 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D UP12_02490 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:bpus00310]
D UP12_09525 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D UP12_07075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_02615 acoL; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_06230 acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_10895 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_11955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_17395 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_02170 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D UP12_02180 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D UP12_09665 lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D UP12_03415 CoA-transferase K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D UP12_03420 CoA-transferase K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D UP12_04935 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D UP12_17720 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09105 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09505 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:bpus00220]
D UP12_05595 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D UP12_13185 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D UP12_13180 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D UP12_01050 arginase K01476 rocF; arginase [EC:3.5.3.1]
D UP12_03895 nitric oxide synthase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D UP12_07175 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D UP12_01550 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D UP12_03360 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D UP12_08500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UP12_05590 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D UP12_07555 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D UP12_05585 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D UP12_07550 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D UP12_10325 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D UP12_18020 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D UP12_05570 N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D UP12_05575 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D UP12_05565 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D UP12_05580 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D UP12_03425 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:bpus00330]
D UP12_01970 hydantoin utilization protein A K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D UP12_01975 hydantoin utilization protein B K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D UP12_07090 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D UP12_17455 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D UP12_17460 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D UP12_13035 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D UP12_17720 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09105 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09505 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_02980 aminoglycoside adenylyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D UP12_01500 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D UP12_03895 nitric oxide synthase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D UP12_01050 arginase K01476 rocF; arginase [EC:3.5.3.1]
D UP12_15945 rocD; ornithine--oxo-acid aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D UP12_09340 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D UP12_06270 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D UP12_10720 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D UP12_01900 proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D UP12_01905 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D UP12_09335 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D UP12_06375 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D UP12_09330 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D UP12_06380 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D UP12_04935 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:bpus00340]
D UP12_16275 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D UP12_16280 ATP phosphoribosyltransferase K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D UP12_16245 phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D UP12_16255 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D UP12_16260 hisH; imidazole glycerol phosphate synthase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D UP12_16250 imidazole glycerol phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D UP12_16265 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D UP12_10150 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D UP12_13345 histidinol phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D UP12_16270 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D UP12_17720 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09105 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09505 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:bpus00350]
D UP12_10150 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D UP12_01515 dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D UP12_02180 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D UP12_06095 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00360 Phenylalanine metabolism [PATH:bpus00360]
D UP12_03510 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D UP12_17390 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D UP12_10150 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D UP12_06095 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D UP12_04935 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D UP12_01500 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:bpus00380]
D UP12_09525 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D UP12_07075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_02615 acoL; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_06230 acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_10895 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_11955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_17395 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_17720 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09105 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09505 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_08650 NADPH--cytochrome P450 reductase K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
D UP12_01500 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D UP12_04835 catalase K03781 katE; catalase [EC:1.11.1.6]
D UP12_19060 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bpus00400]
D UP12_13420 chorismate mutase K13853 aroG; 3-deoxy-7-phosphoheptulonate synthase / chorismate mutase [EC:2.5.1.54 5.4.99.5]
D UP12_10190 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D UP12_01815 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D UP12_11065 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D UP12_11660 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D UP12_01850 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D UP12_10140 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D UP12_10195 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D UP12_10180 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D UP12_10175 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D UP12_10165 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D UP12_10170 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D UP12_10155 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D UP12_10160 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D UP12_10185 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D UP12_12225 ACT domain-containing protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D UP12_10145 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D UP12_12220 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D UP12_10150 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:bpus00410]
D UP12_10045 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D UP12_02170 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D UP12_17720 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09105 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09505 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_10050 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D UP12_08990 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:bpus00430]
D UP12_06185 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D UP12_04780 aminotransferase K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D UP12_15080 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D UP12_10325 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D UP12_17580 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D UP12_13195 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:bpus00450]
D UP12_05925 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D UP12_05930 cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D UP12_14835 cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D UP12_05485 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D UP12_05490 homocysteine methyltransferase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D UP12_06415 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D UP12_15385 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D UP12_16190 aminotransferase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D UP12_16230 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D UP12_07590 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D UP12_00255 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:bpus00460]
D UP12_06185 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D UP12_18205 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D UP12_02925 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D UP12_17225 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D UP12_10805 nitrilase K18282 cynD; cyanide dihydratase [EC:3.5.5.-]
C 00470 D-Amino acid metabolism [PATH:bpus00470]
D UP12_02535 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D UP12_06090 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D UP12_04935 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D UP12_02485 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D UP12_12465 alanine-phosphoribitol ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D UP12_12455 alanine-phosphoribitol ligase K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D UP12_07175 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D UP12_01550 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D UP12_03360 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D UP12_12530 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D UP12_07370 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D UP12_06305 L-alanine-DL-glutamate epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D UP12_06030 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D UP12_15145 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D UP12_10510 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:bpus00480]
D UP12_06185 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D UP12_02250 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D UP12_15100 aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D UP12_13080 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D UP12_10795 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D UP12_10755 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D UP12_09825 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D UP12_17460 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
D UP12_16745 beta-N-acetylhexosaminidase K23989 lytD; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:3.2.1.96]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:bpus00542]
D UP12_16620 glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bpus00541]
D UP12_16700 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D UP12_17830 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D UP12_16645 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D UP12_16950 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D UP12_16650 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D UP12_17650 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D UP12_17645 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D UP12_17635 spore coat protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D UP12_17640 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D UP12_17670 spore coat protein K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210]
D UP12_03715 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D UP12_03720 sugar dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D UP12_16750 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D UP12_00315 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D UP12_16695 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:bpus00550]
D UP12_17155 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D UP12_17315 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D UP12_07385 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D UP12_13440 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D UP12_07370 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D UP12_07360 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D UP12_02485 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D UP12_02490 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D UP12_11480 diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D UP12_08060 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D UP12_14695 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D UP12_17030 UDP-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D UP12_08550 bacitracin ABC transporter permease K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D UP12_07365 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D UP12_07380 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D UP12_10010 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D UP12_05145 penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D UP12_14865 penicillin-binding protein K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D UP12_17465 penicillin-binding protein K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D UP12_07350 penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B
D UP12_07355 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D UP12_11315 penicillin-binding protein K21465 pbpA; penicillin-binding protein A
D UP12_06745 penicillin-binding protein K21466 pbpH; penicillin-binding protein H
D UP12_10435 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D UP12_10565 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D UP12_00075 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D UP12_09265 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D UP12_01005 esterase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D UP12_09630 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:bpus00552]
D UP12_14695 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D UP12_17030 UDP-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D UP12_08550 bacitracin ABC transporter permease K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D UP12_16620 glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D UP12_16735 N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D UP12_16740 CDP-glycerol:glycerophosphate glycerophosphotransferase K21285 tagB; teichoic acid glycerol-phosphate primase [EC:2.7.8.44]
D UP12_16720 CDP-glycerol:glycerophosphate glycerophosphotransferase K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D UP12_16715 hypothetical protein K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D UP12_16725 poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D UP12_12465 alanine-phosphoribitol ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D UP12_12455 alanine-phosphoribitol ligase K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D UP12_12460 alanine transporter K03739 dltB; membrane protein involved in D-alanine export
D UP12_12450 alanine transporter K03740 dltD; D-alanine transfer protein
D UP12_16690 trascriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D UP12_16615 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D UP12_16840 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D UP12_05270 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D UP12_09840 diacylglycerol glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D UP12_04590 glycerol phosphate lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D UP12_03935 glycerol phosphate lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D UP12_15670 hypothetical protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D UP12_11245 hypothetical protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D UP12_04315 glycosyltransferase K25617 csbB; lipoteichoic acid polyisoprenyl-phosphate beta-N-acetylglucosaminyltransferase [EC:2.4.-.-]
D UP12_04320 hypothetical protein K25619 yfhO; lipoteichoic acid glycosylation protein
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:bpus00543]
D UP12_16620 glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D UP12_00615 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D UP12_05445 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:bpus00730]
D UP12_12175 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D UP12_05840 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D UP12_05835 thiamine biosynthesis protein MoeB K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D UP12_13325 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UP12_12040 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UP12_12210 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UP12_13320 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D UP12_05820 glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D UP12_10965 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D UP12_05830 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D UP12_05815 transcriptional regulator K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D UP12_17895 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D UP12_17890 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D UP12_03120 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D UP12_07685 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D UP12_04855 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D UP12_07695 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D UP12_00830 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D UP12_05810 thiaminase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D UP12_18320 TenA family transcriptional regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:bpus00740]
D UP12_03835 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D UP12_18125 GTP cyclohydrolase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D UP12_18130 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D UP12_03850 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D UP12_05540 phosphatase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D UP12_02245 hypothetical protein K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D UP12_16845 hypothetical protein K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D UP12_10465 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D UP12_10475 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D UP12_08150 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D UP12_17785 NADPH-dependent oxidoreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D UP12_17895 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D UP12_10620 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:bpus00750]
D UP12_17740 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D UP12_05105 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D UP12_08880 pyridoxal-5'-phosphate-dependent protein subunit beta K01733 thrC; threonine synthase [EC:4.2.3.1]
D UP12_15185 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D UP12_00085 pyridoxal biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D UP12_00090 glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:bpus00760]
D UP12_12205 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D UP12_12195 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D UP12_12200 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D UP12_14990 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D UP12_10570 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D UP12_09635 purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D UP12_15255 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D UP12_03975 cpdB; 2', 3'-cyclic nucleotide 2'-phosphodiesterase K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5]
D UP12_11650 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D UP12_01775 NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D UP12_13230 ppnK; inorganic polyphosphate kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D UP12_05790 ppnK; inorganic polyphosphate kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D UP12_02180 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:bpus00770]
D UP12_12430 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D UP12_16925 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D UP12_01820 acetohydroxyacid synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D UP12_12425 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D UP12_12420 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D UP12_09810 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D UP12_10055 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D UP12_07325 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D UP12_10050 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D UP12_10700 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D UP12_00425 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D UP12_07645 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D UP12_07280 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D UP12_13045 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D UP12_02525 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D UP12_02040 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D UP12_17970 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D UP12_12435 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D UP12_10045 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D UP12_17720 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09105 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09505 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:bpus00780]
D UP12_05645 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D UP12_01265 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D UP12_06240 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_08265 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_07750 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_13170 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_06730 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_06235 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_16990 hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D UP12_05845 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D UP12_14685 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D UP12_12805 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D UP12_10060 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:bpus00785]
D UP12_11095 octanoyltransferase K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D UP12_15230 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D UP12_17525 octanoyl-[GcvH]:protein N-octanoyltransferase K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D UP12_05190 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D UP12_07075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_02615 acoL; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_06230 acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_10895 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_07060 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D UP12_07065 2-oxoisovalerate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D UP12_02610 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D UP12_06225 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D UP12_07070 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D UP12_09530 2-oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D UP12_09525 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D UP12_10890 2-oxoisovalerate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D UP12_10885 2-oxoisovalerate dehydrogenase K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D UP12_10880 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D UP12_11110 glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D UP12_11105 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D UP12_11115 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D UP12_15440 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:bpus00790]
D UP12_10230 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D UP12_04855 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D UP12_00465 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D UP12_00470 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D UP12_00460 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D UP12_09780 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D UP12_12310 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D UP12_03835 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D UP12_18125 GTP cyclohydrolase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D UP12_00450 anthranilate synthase component II K25575 pabA; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component II [EC:2.6.1.123]
D UP12_00445 aminobenzoate synthetase K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123]
D UP12_00455 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D UP12_06630 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D UP12_06635 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D UP12_06625 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D UP12_06640 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D UP12_17120 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D UP12_03150 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D UP12_06930 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D UP12_13190 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D UP12_06920 molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D UP12_06910 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:bpus00670]
D UP12_09780 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D UP12_09830 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D UP12_10985 5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D UP12_17225 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D UP12_03380 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D UP12_03385 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D UP12_07660 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D UP12_11115 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D UP12_05485 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D UP12_05490 homocysteine methyltransferase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D UP12_09785 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D UP12_06370 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D UP12_11270 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:bpus00860]
D UP12_12360 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D UP12_04425 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D UP12_12335 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D UP12_12340 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D UP12_12350 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D UP12_09230 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D UP12_12345 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D UP12_05150 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D UP12_05005 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D UP12_11575 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D UP12_05160 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D UP12_05155 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D UP12_17585 heme peroxidase K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D UP12_07600 uroporphyrin-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D UP12_07610 precorrin-2 dehydrogenase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D UP12_07605 sirohydrochlorin ferrochelatase K03794 sirB; sirohydrochlorin ferrochelatase [EC:4.99.1.4]
D UP12_07205 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D UP12_07200 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:bpus00130]
D UP12_10215 ubiquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D UP12_13915 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D UP12_18980 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D UP12_13910 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D UP12_13905 esterase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D UP12_13890 O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D UP12_13895 O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D UP12_13900 dihydroxynaphthoic acid synthetase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D UP12_14955 esterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D UP12_13920 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D UP12_13295 NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D UP12_02185 NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D UP12_08865 flavodoxin K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D UP12_19065 NAD(P)H:quinone oxidoreductase, type IV K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D UP12_04685 hypothetical protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D UP12_08605 NmrA family protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:bpus00900]
D UP12_10965 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D UP12_08070 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D UP12_00600 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D UP12_00295 ipk; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D UP12_00605 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D UP12_11350 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D UP12_11410 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D UP12_11955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_17395 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_10280 isopentenyl pyrophosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D UP12_10970 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D UP12_10220 heptaprenyl diphosphate synthase K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D UP12_10210 heptaprenyl diphosphate synthase K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D UP12_08060 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:bpus00906]
D UP12_05410 capsular biosynthesis protein CpsH K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D UP12_05415 phytoene synthase K10208 crtM; 4,4'-diapophytoene synthase [EC:2.5.1.96]
D UP12_05405 phytoene desaturase K10209 crtN; 4,4'-diapophytoene desaturase [EC:1.3.8.2]
D UP12_13760 phytoene dehydrogenase K10210 crtP; diapolycopene oxygenase [EC:1.14.99.44]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D UP12_17720 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09105 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09505 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:bpus00907]
D UP12_09135 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D UP12_15455 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D UP12_08700 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:bpus00523]
D UP12_17650 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D UP12_17645 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D UP12_17635 spore coat protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D UP12_17640 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:bpus01054]
D UP12_02000 peptide synthetase K15654 srfAA; surfactin/lichenysin synthetase A
D UP12_02005 peptide synthetase K15655 srfAB; surfactin/lichenysin synthetase B
D UP12_02010 peptide synthetase K15656 srfAC; surfactin/lichenysin synthetase C
D UP12_06030 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:bpus01053]
D UP12_13915 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D UP12_18980 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D UP12_18990 Isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D UP12_18975 2,3-dihydroxybenzoate-2,3-dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D UP12_18985 entE; enterobactin synthase subunit E K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D UP12_18995 diguanylate cyclase K04780 dhbF; glyine---[glycyl-carrier protein] ligase [EC:6.2.1.66]
C 01055 Biosynthesis of vancomycin group antibiotics
D UP12_17645 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D UP12_01885 cephalosporin deacetylase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
C 00332 Carbapenem biosynthesis [PATH:bpus00332]
D UP12_09335 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D UP12_06375 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D UP12_09330 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D UP12_06380 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:bpus00261]
D UP12_19000 protein mbtH K05375 mbtH; MbtH protein
D UP12_07590 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D UP12_08200 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D UP12_12835 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D UP12_02140 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D UP12_08195 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D UP12_05975 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D UP12_08205 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D UP12_01855 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D UP12_10085 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:bpus00521]
D UP12_11250 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D UP12_04805 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D UP12_07110 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D UP12_17650 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D UP12_17645 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D UP12_17635 spore coat protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D UP12_17640 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D UP12_11250 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:bpus00525]
D UP12_17650 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D UP12_17645 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:bpus00401]
D UP12_10145 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D UP12_10150 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D UP12_10180 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D UP12_07745 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D UP12_06240 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_08265 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_07750 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_13170 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_06730 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_06235 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_05845 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:bpus00998]
D UP12_01740 NTD biosynthesis operon oxidoreductase NtdC K18652 ntdC; glucose-6-phosphate 3-dehydrogenase [EC:1.1.1.361]
D UP12_01730 NTD biosynthesis operon protein NtdA K18653 ntdA; 3-dehydro-glucose-6-phosphate---glutamate transaminase [EC:2.6.1.104]
D UP12_01735 HAD family hydrolase K18654 ntdB; kanosamine-6-phosphate phosphatase [EC:3.1.3.92]
D UP12_07755 acyl carrier protein K02078 acpP; acyl carrier protein
D UP12_17605 bacilysin biosynthesis protein BacA K19546 bacA; prephenate decarboxylase [EC:4.1.1.100]
D UP12_17610 cupin K19547 bacB; 3-[(4R)-4-hydroxycyclohexa-1,5-dien-1-yl]-2-oxopropanoate isomerase [EC:5.3.3.19]
D UP12_17630 bacilysin biosynthesis protein BacA K19550 bacG; bacilysin biosynthesis oxidoreductase BacG [EC:1.3.1.-]
D UP12_17625 aspartate aminotransferase K19549 bacF; bacilysin biosynthesis transaminase BacF [EC:2.6.1.-]
D UP12_17615 oxidoreductase K19548 bacC; dihydroanticapsin dehydrogenase [EC:1.1.1.385]
D UP12_17620 carboxylate--amine ligase K13037 bacD; L-alanine-L-anticapsin ligase [EC:6.3.2.49]
C 00999 Biosynthesis of various plant secondary metabolites [PATH:bpus00999]
D UP12_13740 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D UP12_11660 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:bpus00362]
D UP12_15455 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D UP12_18120 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D UP12_17480 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D UP12_03235 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D UP12_17570 S-adenosylmethionine: 2-demethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D UP12_15460 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D UP12_12865 enoyl-CoA hydratase K13767 fadB; enoyl-CoA hydratase [EC:4.2.1.17]
D UP12_03510 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D UP12_17390 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D UP12_11955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_17395 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:bpus00627]
D UP12_01500 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D UP12_03900 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D UP12_03415 CoA-transferase K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D UP12_03420 CoA-transferase K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D UP12_08650 NADPH--cytochrome P450 reductase K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:bpus00625]
D UP12_01515 dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D UP12_17720 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09105 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_09505 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D UP12_11870 aldehyde dismutase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D UP12_18120 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation
D UP12_06095 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00622 Xylene degradation [PATH:bpus00622]
D UP12_06095 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D UP12_18120 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D UP12_17480 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D UP12_15455 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:bpus00643]
D UP12_01500 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D UP12_18120 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D UP12_17480 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:bpus00626]
D UP12_01515 dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:bpus03020]
D UP12_00680 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D UP12_00685 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D UP12_00865 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D UP12_07640 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D UP12_17345 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:bpus03010]
D UP12_10285 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D UP12_08040 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D UP12_00755 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D UP12_13360 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D UP12_00810 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D UP12_19100 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D UP12_00700 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D UP12_00795 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D UP12_00900 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D UP12_00720 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D UP12_00860 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D UP12_00695 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D UP12_00855 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D UP12_00790 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D UP12_17115 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D UP12_08155 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D UP12_07785 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D UP12_00770 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D UP12_19090 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D UP12_00745 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D UP12_11600 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D UP12_11530 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D UP12_00660 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D UP12_00740 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D UP12_00725 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D UP12_00730 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D UP12_00785 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D UP12_00800 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D UP12_00670 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D UP12_19025 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D UP12_00665 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D UP12_00655 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D UP12_00895 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D UP12_00775 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D UP12_00820 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D UP12_00760 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D UP12_00870 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D UP12_00805 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D UP12_07810 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D UP12_12955 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D UP12_12250 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D UP12_00750 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D UP12_00735 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D UP12_00780 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D UP12_00325 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D UP12_12240 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D UP12_07705 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D UP12_00765 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D UP12_00815 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D UP12_13860 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D UP12_17300 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D UP12_07310 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D UP12_17105 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D UP12_11275 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D UP12_12960 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D UP12_00850 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D UP12_00690 50S ribosomal protein L7 K07590 RP-L7A; large subunit ribosomal protein L7A
D UP12_03095 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_00040 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_00550 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_00960 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_14050 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_00160 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_00490 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_04450 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_00555 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_00175 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_04455 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_00055 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_00495 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_00965 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_03100 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_14045 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_04460 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_00060 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_00180 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_00500 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_00560 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_00970 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_03105 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_14040 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:bpus00970]
D UP12_00050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UP12_14500 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UP12_00545 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UP12_13995 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UP12_00170 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UP12_00535 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UP12_16140 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UP12_12505 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UP12_03085 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UP12_14005 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UP12_00975 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D UP12_04465 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D UP12_02625 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D UP12_13945 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D UP12_03115 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D UP12_18905 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D UP12_13970 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D UP12_04490 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D UP12_04530 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D UP12_01045 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D UP12_02640 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D UP12_11205 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D UP12_04520 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D UP12_01025 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UP12_00390 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UP12_04475 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UP12_18910 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UP12_02635 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UP12_13935 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UP12_13955 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UP12_04525 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UP12_03090 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UP12_14015 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UP12_04635 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UP12_00525 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UP12_04515 tRNA-His K14226 tRNA-His; tRNA His
D UP12_13960 tRNA-His K14226 tRNA-His; tRNA His
D UP12_00045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D UP12_00165 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D UP12_13950 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D UP12_02655 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UP12_00520 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UP12_00530 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UP12_04535 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UP12_04540 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UP12_02650 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UP12_14010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UP12_14020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UP12_00515 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D UP12_02645 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D UP12_14025 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D UP12_18915 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D UP12_00385 tRNA-Met K14230 tRNA-Met; tRNA Met
D UP12_03110 tRNA-Met K14230 tRNA-Met; tRNA Met
D UP12_13985 tRNA-Met K14230 tRNA-Met; tRNA Met
D UP12_04485 tRNA-Met K14230 tRNA-Met; tRNA Met
D UP12_13975 tRNA-Met K14230 tRNA-Met; tRNA Met
D UP12_13990 tRNA-Met K14230 tRNA-Met; tRNA Met
D UP12_04495 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D UP12_13965 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D UP12_18900 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D UP12_00540 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D UP12_14000 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D UP12_00105 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UP12_02630 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UP12_13980 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UP12_04470 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UP12_13940 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UP12_00980 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D UP12_00510 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D UP12_04500 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D UP12_14030 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D UP12_01035 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D UP12_04510 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D UP12_01040 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D UP12_04505 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D UP12_00505 tRNA-Val K14237 tRNA-Val; tRNA Val
D UP12_05935 tRNA-Val K14237 tRNA-Val; tRNA Val
D UP12_01030 tRNA-Val K14237 tRNA-Val; tRNA Val
D UP12_04480 tRNA-Val K14237 tRNA-Val; tRNA Val
D UP12_14035 tRNA-Val K14237 tRNA-Val; tRNA Val
D UP12_00610 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D UP12_03580 gatA; glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D UP12_03585 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D UP12_03575 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D UP12_11985 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D UP12_12060 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D UP12_10030 asnC; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D UP12_11460 glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D UP12_11455 glycine-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D UP12_04125 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D UP12_13000 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D UP12_00095 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D UP12_00620 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D UP12_00255 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D UP12_07660 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D UP12_12315 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D UP12_13655 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D UP12_07510 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D UP12_00485 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D UP12_17440 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D UP12_08080 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D UP12_01315 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D UP12_12065 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D UP12_12920 pheS; phenylalanine--tRNA ligase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D UP12_12915 phenylalanyl-tRNA synthase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D UP12_13390 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D UP12_05685 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:bpus03060]
D UP12_00825 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D UP12_00645 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D UP12_15815 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D UP12_12105 preprotein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D UP12_12130 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D UP12_19175 OxaA-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UP12_10815 OxaA-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UP12_16500 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D UP12_07780 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D UP12_07770 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D UP12_03160 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D UP12_03165 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D UP12_04595 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D UP12_05285 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D UP12_06980 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D UP12_07520 peptidase A8 K03101 lspA; signal peptidase II [EC:3.4.23.36]
D UP12_11140 signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:bpus04122]
D UP12_13325 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UP12_12040 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UP12_12210 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UP12_01305 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D UP12_12035 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D UP12_06930 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D UP12_17120 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D UP12_06935 molybdenum cofactor biosynthesis protein MoaD K03636 moaD; sulfur-carrier protein
D UP12_06915 thiamine biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D UP12_03150 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D UP12_13190 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D UP12_13320 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D UP12_05825 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D UP12_05835 thiamine biosynthesis protein MoeB K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:bpus03018]
D UP12_15910 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UP12_08160 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D UP12_15805 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D UP12_02505 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D UP12_13235 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D UP12_10355 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D UP12_09480 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D UP12_17305 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D UP12_08300 ribonuclease K18682 rny; ribonucrease Y [EC:3.1.-.-]
D UP12_07030 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D UP12_08210 Zn-dependent hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D UP12_13110 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D UP12_11560 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D UP12_03190 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D UP12_08440 RNA-binding protein Hfq K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:bpus03030]
D UP12_13130 dnaE; DNA polymerase III DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D UP12_08085 polC; DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D UP12_00135 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D UP12_00220 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D UP12_11605 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D UP12_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UP12_14415 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D UP12_18955 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D UP12_11435 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D UP12_19095 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UP12_19455 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UP12_09865 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D UP12_09875 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D UP12_07820 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D UP12_12910 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D UP12_13060 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D UP12_03475 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:bpus03410]
D UP12_10020 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D UP12_17725 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D UP12_04360 DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D UP12_13055 5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D UP12_04075 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D UP12_11395 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D UP12_13060 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D UP12_12090 recombinase RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D UP12_03475 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:bpus03420]
D UP12_00340 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D UP12_16375 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D UP12_16380 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D UP12_12840 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D UP12_05900 ATP-dependent DNA helicase Rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D UP12_03470 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D UP12_13060 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D UP12_03475 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:bpus03430]
D UP12_08355 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D UP12_12890 recombination and DNA strand exchange inhibitor protein K07456 mutS2; DNA mismatch repair protein MutS2
D UP12_08360 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D UP12_05900 ATP-dependent DNA helicase Rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D UP12_03470 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D UP12_10980 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D UP12_10975 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D UP12_12090 recombinase RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D UP12_19095 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UP12_19455 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UP12_13130 dnaE; DNA polymerase III DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D UP12_08085 polC; DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D UP12_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UP12_00135 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D UP12_11605 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D UP12_00220 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D UP12_03475 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:bpus03440]
D UP12_12090 recombinase RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D UP12_19095 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UP12_19455 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UP12_00020 recombinase RecF K03629 recF; DNA replication and repair protein RecF
D UP12_11465 DNA recombination protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D UP12_00145 recombinase RecR K06187 recR; recombination protein RecR
D UP12_08295 recombinase RecA K03553 recA; recombination protein RecA
D UP12_13060 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D UP12_12155 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D UP12_12150 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D UP12_07730 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D UP12_12025 hypothetical protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D UP12_13130 dnaE; DNA polymerase III DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D UP12_08085 polC; DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D UP12_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UP12_00135 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D UP12_11605 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D UP12_00220 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D UP12_07650 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:bpus03450]
D UP12_08585 DNA repair protein K10979 ku; DNA end-binding protein Ku
D UP12_08580 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:bpus02010]
D UP12_15675 molybdenum ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D UP12_15680 molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein
D UP12_01690 glycine/betaine ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein
D UP12_01685 glycine/betaine ABC transporter K02001 proW; glycine betaine/proline transport system permease protein
D UP12_01680 glycine/betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D UP12_19080 glycine/betaine ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein
D UP12_15850 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D UP12_15845 amino acid ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D UP12_15855 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D UP12_19085 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D UP12_15860 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D UP12_04965 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D UP12_18515 cyclodextrin-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D UP12_18520 arabinogalactan ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D UP12_18525 arabinogalactan oligomer transport system permease GanQ K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D UP12_09010 binding protein msmE K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D UP12_09005 glycerol-3-phosphate ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D UP12_09000 maltose ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D UP12_14890 CD4+ T-cell-stimulating antigen K07335 bmpA; basic membrane protein A and related proteins
D UP12_05505 ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D UP12_14900 branched-chain amino acid ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D UP12_14905 sugar ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D UP12_14895 heme ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D UP12_16765 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D UP12_16760 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D UP12_16755 ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D UP12_16910 D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein
D UP12_16905 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D UP12_16900 D-ribose transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D UP12_16895 ribose ABC transporter K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D UP12_11310 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D UP12_11305 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D UP12_11300 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D UP12_11290 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D UP12_11295 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D UP12_17935 glutamine ABC transporter substrate-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D UP12_17930 nickel transporter K10037 glnP; glutamine transport system permease protein
D UP12_17925 peptide ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D UP12_12000 amino acid ABC transporter substrate-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D UP12_12005 glutamine ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D UP12_12010 glutamine ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D UP12_11995 amino acid ABC transporter ATPase K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D UP12_01925 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D UP12_02080 L-cystine-binding protein TcyA K02424 tcyA; L-cystine transport system substrate-binding protein
D UP12_01920 cysteine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D UP12_02075 cysteine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D UP12_02070 amino acid ABC transporter ATPase K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D UP12_11820 amino acid ABC transporter substrate-binding protein K16957 tcyK; L-cystine transport system substrate-binding protein
D UP12_11825 amino acid ABC transporter permease K16958 tcyL; L-cystine transport system permease protein
D UP12_11830 ABC transporter permease K16959 tcyM; L-cystine transport system permease protein
D UP12_11815 amino acid ABC transporter ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D UP12_02110 ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D UP12_02115 ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D UP12_02120 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D UP12_10860 ABC transporter substrate-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D UP12_10855 arginine ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D UP12_10850 peptide ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D UP12_15405 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D UP12_15410 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D UP12_15415 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D UP12_05690 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D UP12_05695 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D UP12_05700 diguanylate cyclase K15582 oppC; oligopeptide transport system permease protein
D UP12_05705 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D UP12_05710 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D UP12_06295 cytochrome C K16199 dppE; dipeptide transport system substrate-binding protein
D UP12_06280 peptide ABC transporter permease K16200 dppB1; dipeptide transport system permease protein
D UP12_06285 diguanylate cyclase K16201 dppC; dipeptide transport system permease protein
D UP12_06290 peptide ABC transporter ATP-binding protein K16202 dppD; dipeptide transport system ATP-binding protein
D UP12_16120 nickel ABC transporter substrate-binding protein K15584 nikA; nickel transport system substrate-binding protein
D UP12_15995 nickel ABC transporter substrate-binding protein K15584 nikA; nickel transport system substrate-binding protein
D UP12_16115 nickel transporter permease NikB K15585 nikB; nickel transport system permease protein
D UP12_15990 nickel transporter permease NikB K15585 nikB; nickel transport system permease protein
D UP12_16110 peptide ABC transporter permease K15586 nikC; nickel transport system permease protein
D UP12_15985 nikC; nickel transporter permease NikC K15586 nikC; nickel transport system permease protein
D UP12_16105 ABC transporter ATP-binding protein K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D UP12_15980 nickel ABC transporter ATP-binding protein K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D UP12_16100 peptide ABC transporter ATP-binding protein K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D UP12_15975 nickel ABC transporter ATP-binding protein K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D UP12_15730 manganese ABC transporter substrate-binding protein K19975 mntC; manganese transport system substrate-binding protein
D UP12_15725 manganese ABC transporter permease K19976 mntB; manganese transport system permease protein
D UP12_15720 manganese transporter K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D UP12_13855 adhesin K09815 znuA; zinc transport system substrate-binding protein
D UP12_11375 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D UP12_11380 ABC transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D UP12_15085 biotin biosynthesis protein BioC K03523 bioY; biotin transport system substrate-specific component
D UP12_11965 biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component
D UP12_00885 cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D UP12_18305 cobalt transporter K16785 ecfT; energy-coupling factor transport system permease protein
D UP12_18835 membrane protein K16785 ecfT; energy-coupling factor transport system permease protein
D UP12_00875 cbiO; cobalt transporter ATP-binding subunit K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D UP12_00880 cbiO; cobalt transporter ATP-binding subunit K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D UP12_16710 Teichoic acid translocation permease TagG K09692 tagG; teichoic acid transport system permease protein
D UP12_16705 teichoic acid ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D UP12_01595 protein natB K09696 natB; sodium transport system permease protein
D UP12_01590 ABC transporter ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D UP12_13285 bacitracin ABC transporter permease K11632 bceB; bacitracin transport system permease protein
D UP12_13280 bacitracin ABC transporter ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein
D UP12_16465 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D UP12_16470 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D UP12_13675 macrolide ABC transporter permease K16918 ytrF; acetoin utilization transport system permease protein
D UP12_13685 ABC transporter ATP-binding protein K16919 ytrC_D; acetoin utilization transport system permease protein
D UP12_13690 antibiotic ABC transporter ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D UP12_13680 ABC transporter ATP-binding protein K16920 ytrE; acetoin utilization transport system ATP-binding protein
D UP12_04945 multidrug ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D UP12_04950 multidrug ABC transporter permease K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D UP12_09305 multidrug ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D UP12_09310 ABC transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D UP12_18045 ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D UP12_18050 ATP-binding/permease CydC K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D UP12_16095 ABC transporter K19349 vga; pleuromutilin/lincosamide/streptogramin A transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:bpus02060]
D UP12_06710 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D UP12_06705 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D UP12_06700 PTS system glucose-specific transporter subunit IICBA K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D UP12_09970 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D UP12_03915 PTS sugar transporter K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D UP12_17755 PTS system sucrose-specific transporter subuits IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D UP12_01010 PTS sugar transporter subunit IIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D UP12_18285 PTS beta-glucoside transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D UP12_18625 PTS beta-glucoside transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D UP12_01380 PTS beta-glucoside transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D UP12_03645 PTS alpha-glucoside transporter subunit IIBC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D UP12_03955 trehalose permease IIC protein K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D UP12_02205 PTS mannitol transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D UP12_02200 PTS system mannitol-specific transporter subunit IIBC K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D UP12_17990 PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D UP12_18145 PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D UP12_10775 PTS dihydroxyacetone transporter K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D UP12_18000 PTS mannose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D UP12_18150 PTS cellobiose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D UP12_10780 PTS mannose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D UP12_17995 oligo-beta-mannoside permease IIC protein K02761 celB; cellobiose PTS system EIIC component
D UP12_18165 PTS lactose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D UP12_10770 oligo-beta-mannoside permease IIC protein K02761 celB; cellobiose PTS system EIIC component
D UP12_07465 PTS sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D UP12_07460 PTS sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D UP12_07455 PTS sorbitol transporter subunit IIC K02783 srlA; glucitol/sorbitol PTS system EIIC component
D UP12_06190 PTS lichenan transporter subunit IIC K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D UP12_06200 PTS galactitol transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D UP12_06195 gatC; PTS system galactitol-specific transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D UP12_09030 PTS lactose transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D UP12_09025 PTS beta-glucoside transporter subunit IIBC K03475 ulaA; ascorbate PTS system EIIC component
D UP12_09070 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D UP12_01420 FruA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D UP12_06975 PTS fructose transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D UP12_01425 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D UP12_09065 PTS fructose transporter subunit IIBC K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D UP12_01430 PTS glucose transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D UP12_06970 phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:bpus03070]
D UP12_12105 preprotein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D UP12_00645 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D UP12_15815 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D UP12_00825 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D UP12_12130 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D UP12_19175 OxaA-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UP12_10815 OxaA-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UP12_16500 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D UP12_07770 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D UP12_07780 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D UP12_03160 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D UP12_03165 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D UP12_19315 conjugal transfer protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:bpus02020]
D UP12_13065 alkaline phosphatase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D UP12_13070 chemotaxis protein CheY K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D UP12_04855 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D UP12_11310 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D UP12_15505 histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D UP12_15500 transcriptional regulator K07770 cssR; two-component system, OmpR family, response regulator CssR
D UP12_06265 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D UP12_15495 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D UP12_05960 flagellin K02406 fliC; flagellin
D UP12_06110 flagellin K02406 fliC; flagellin
D UP12_06115 flagellin K02406 fliC; flagellin
D UP12_06120 flagellin K02406 fliC; flagellin
D UP12_06125 flagellin K02406 fliC; flagellin
D UP12_08030 RNA polymerase sigma factor SigD K02405 fliA; RNA polymerase sigma factor FliA
D UP12_06610 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D UP12_10395 histidine kinase K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D UP12_10400 transcriptional regulator K07775 resD; two-component system, OmpR family, response regulator ResD
D UP12_07200 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D UP12_18890 histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D UP12_18895 PhoP family transcriptional regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D UP12_08975 transcriptional regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D UP12_00005 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D UP12_13265 histidine kinase K11629 bceS; two-component system, OmpR family, bacitracin resistance sensor histidine kinase BceS [EC:2.7.13.3]
D UP12_13260 PhoB family transcriptional regulator K11630 bceR; two-component system, OmpR family, bacitracin resistance response regulator BceR
D UP12_13280 bacitracin ABC transporter ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein
D UP12_13285 bacitracin ABC transporter permease K11632 bceB; bacitracin transport system permease protein
D UP12_12465 alanine-phosphoribitol ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D UP12_12460 alanine transporter K03739 dltB; membrane protein involved in D-alanine export
D UP12_12455 alanine-phosphoribitol ligase K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D UP12_12450 alanine transporter K03740 dltD; D-alanine transfer protein
D UP12_04255 phosphatidylglycerol lysyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D UP12_09630 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D UP12_06430 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D UP12_06425 PhoB family transcriptional regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D UP12_16415 transcriptional regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D UP12_06750 sporulation kinase K02491 kinA; two-component system, sporulation sensor kinase A [EC:2.7.13.3]
D UP12_14840 sporulation kinase K07697 kinB; two-component system, sporulation sensor kinase B [EC:2.7.13.3]
D UP12_14850 kinase K06347 kapB; kinase-associated protein B
D UP12_07010 sporulation kinase K07698 kinC; two-component system, sporulation sensor kinase C [EC:2.7.13.3]
D UP12_06595 sporulation kinase K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D UP12_06545 sporulation kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D UP12_17330 chemotaxis protein CheY K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D UP12_12235 sporulation protein K06375 spo0B; stage 0 sporulation protein B (sporulation initiation phosphotransferase) [EC:2.7.-.-]
D UP12_10940 chemotaxis protein CheY K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D UP12_03860 histidine kinase K11637 citS; two-component system, CitB family, sensor histidine kinase CitS [EC:2.7.13.3]
D UP12_03865 transcriptional regulator K11638 K11638; two-component system, CitB family, response regulator CitT
D UP12_03875 citrate transporter K11639 citM; Mg2+/citrate complex secondary transporter
D UP12_02440 histidine kinase K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3]
D UP12_02445 chemotaxis protein CheY K11692 K11692; two-component system, CitB family, response regulator DctR
D UP12_14880 histidine kinase K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D UP12_14885 transcriptional regulator K11615 malR; two-component system, CitB family, response regulator MalR
D UP12_13485 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D UP12_17290 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D UP12_13125 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D UP12_14910 malate permease K11616 maeN; malate:Na+ symporter
D UP12_12985 histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D UP12_12980 two-component response regulator K07705 lytT; two-component system, LytTR family, response regulator LytT
D UP12_12975 antiholin LrgA K05338 lrgA; holin-like protein
D UP12_12970 antiholin LrgB K05339 lrgB; holin-like protein LrgB
D UP12_01580 histidine kinase K11640 natK; two-component system, LytTR family, sensor histidine kinase NatK [EC:2.7.13.3]
D UP12_01585 LuxR family transcriptional regulator K11641 natR; two-component system, LytTR family, response regulator NatR
D UP12_01590 ABC transporter ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D UP12_01595 protein natB K09696 natB; sodium transport system permease protein
D UP12_16540 carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D UP12_14965 histidine kinase K07680 comP; two-component system, NarL family, sensor histidine kinase ComP [EC:2.7.13.3]
D UP12_14960 transcriptional regulator K07691 comA; two-component system, NarL family, competent response regulator ComA
D UP12_16605 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D UP12_16600 chemotaxis protein CheY K07692 degU; two-component system, NarL family, response regulator DegU
D UP12_13245 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D UP12_13250 transcriptional regulatory protein DesR K07693 desR; two-component system, NarL family, response regulator DesR
D UP12_13240 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D UP12_15545 histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D UP12_15540 LuxR family transcriptional regulator K11618 liaR; two-component system, NarL family, response regulator LiaR
D UP12_15565 membrane protein K11619 liaI; lia operon protein LiaI
D UP12_15560 protein LiaH K11620 liaH; lia operon protein LiaH
D UP12_15555 hypothetical protein K11621 liaG; lia operon protein LiaG
D UP12_15550 liaF K11622 liaF; lia operon protein LiaF
D UP12_02960 histidine kinase K11623 ydfH; two-component system, NarL family, sensor histidine kinase YdfH [EC:2.7.13.3]
D UP12_02965 chemotaxis protein CheY K11624 ydfI; two-component system, NarL family, response regulator YdfI
D UP12_02955 hypothetical protein K11625 ydfJ; membrane protein YdfJ
D UP12_02750 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D UP12_17060 nitrogen regulatory PII K04751 glnB; nitrogen regulatory protein P-II 1
D UP12_08500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UP12_03415 CoA-transferase K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D UP12_03420 CoA-transferase K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D UP12_11955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_17395 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_02450 glutamate:protein symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D UP12_15960 RNA polymerase sigma54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D UP12_10200 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D UP12_04730 histidine kinase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D UP12_03945 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_14720 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_14725 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_14730 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_14735 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_01955 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_02215 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_06725 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_16510 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_08015 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D UP12_10820 chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D UP12_08010 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D UP12_07960 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D UP12_08005 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D UP12_06775 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D UP12_02435 C4-dicarboxylate ABC transporter K11688 dctP; C4-dicarboxylate-binding protein DctP
D UP12_17560 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D UP12_01555 histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D UP12_15750 histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D UP12_01560 transcriptional regulator K07719 glnL; two-component system, response regulator GlnL
D UP12_15745 transcriptional regulator K07719 glnL; two-component system, response regulator GlnL
D UP12_07175 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D UP12_01550 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D UP12_01545 sodium:alanine symporter K11626 glnT; putative sodium/glutamine symporter
D UP12_16775 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D UP12_16770 response regulator K07720 yesN; two-component system, response regulator YesN
D UP12_18060 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D UP12_13870 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D UP12_18055 cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D UP12_13875 membrane protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D UP12_03995 phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D UP12_16695 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D UP12_09270 pectin esterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D UP12_08090 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D UP12_16570 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D UP12_01050 arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:bpus02024]
D UP12_13840 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D UP12_08440 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D UP12_10180 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D UP12_01980 ABC transporter ATP-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D UP12_01995 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D UP12_01990 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D UP12_01985 sugar ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D UP12_18040 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D UP12_12875 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D UP12_05195 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D UP12_03835 GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D UP12_03845 wd domain protein K20332 toxC; toxoflavin biosynthesis protein ToxC
D UP12_03840 serine/threonine protein kinase K20333 toxD; toxoflavin biosynthesis protein ToxD
D UP12_18130 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D UP12_03850 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D UP12_09090 membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D UP12_09100 membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D UP12_05690 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D UP12_05695 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D UP12_05700 diguanylate cyclase K15582 oppC; oligopeptide transport system permease protein
D UP12_05705 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D UP12_05710 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D UP12_05665 peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D UP12_04405 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D UP12_05670 diguanylate cyclase K02033 ABC.PE.P; peptide/nickel transport system permease protein
D UP12_04410 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D UP12_05675 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D UP12_04415 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D UP12_05655 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D UP12_04395 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D UP12_05660 peptide ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D UP12_19175 OxaA-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UP12_10815 OxaA-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UP12_08655 peptidase K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19]
D UP12_14970 quorum-sensing protein K02251 comQ; competence protein ComQ
D UP12_14965 histidine kinase K07680 comP; two-component system, NarL family, sensor histidine kinase ComP [EC:2.7.13.3]
D UP12_14960 transcriptional regulator K07691 comA; two-component system, NarL family, competent response regulator ComA
D UP12_05240 competence protein K02250 comK; competence protein ComK
D UP12_02000 peptide synthetase K15654 srfAA; surfactin/lichenysin synthetase A
D UP12_02005 peptide synthetase K15655 srfAB; surfactin/lichenysin synthetase B
D UP12_02010 peptide synthetase K15656 srfAC; surfactin/lichenysin synthetase C
D UP12_02025 thioesterase K15657 srfATE; external thioesterase TEII
D UP12_12105 preprotein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D UP12_00645 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D UP12_15815 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D UP12_00825 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D UP12_12130 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D UP12_16500 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D UP12_07770 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D UP12_07780 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D UP12_08565 aspartate phosphatase K06369 rapK; response regulator aspartate phosphatase K [EC:3.1.-.-]
D UP12_18610 aspartate phosphatase K06369 rapK; response regulator aspartate phosphatase K [EC:3.1.-.-]
D UP12_11690 aspartate phosphatase K06366 rapH; response regulator aspartate phosphatase H [EC:3.1.-.-]
D UP12_05995 aspartate phosphatase K06366 rapH; response regulator aspartate phosphatase H [EC:3.1.-.-]
D UP12_14115 aspartate phosphatase K06366 rapH; response regulator aspartate phosphatase H [EC:3.1.-.-]
D UP12_06070 aspartate phosphatase K06359 rapA; response regulator aspartate phosphatase A (stage 0 sporulation protein L) [EC:3.1.-.-]
D UP12_10650 aspartate phosphatase K06359 rapA; response regulator aspartate phosphatase A (stage 0 sporulation protein L) [EC:3.1.-.-]
D UP12_06385 aspartate phosphatase K06359 rapA; response regulator aspartate phosphatase A (stage 0 sporulation protein L) [EC:3.1.-.-]
D UP12_16600 chemotaxis protein CheY K07692 degU; two-component system, NarL family, response regulator DegU
D UP12_17330 chemotaxis protein CheY K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D UP12_12235 sporulation protein K06375 spo0B; stage 0 sporulation protein B (sporulation initiation phosphotransferase) [EC:2.7.-.-]
D UP12_10940 chemotaxis protein CheY K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D UP12_04270 transcriptional regulator K20480 nprR; HTH-type transcriptional regulator, quorum sensing regulator NprR
D UP12_16415 transcriptional regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:bpus02030]
D UP12_03945 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_14720 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_14725 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_14730 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_14735 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_01955 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_02215 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_06725 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_16510 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_16910 D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein
D UP12_08010 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D UP12_08015 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D UP12_10820 chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D UP12_07960 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D UP12_08020 chemotaxis protein CheY K03410 cheC; chemotaxis protein CheC
D UP12_08005 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D UP12_04730 histidine kinase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D UP12_06775 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D UP12_08025 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D UP12_10200 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D UP12_07900 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D UP12_07950 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D UP12_07955 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D UP12_06610 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D UP12_06605 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:bpus02040]
D UP12_07890 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D UP12_07895 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D UP12_07900 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D UP12_07905 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D UP12_07910 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D UP12_07915 fliJ; flagellar biosynthesis chaperone K02413 fliJ; flagellar protein FliJ
D UP12_07925 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D UP12_07945 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D UP12_07950 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D UP12_07955 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D UP12_07965 flagella biosynthesis protein FliZ K02418 fliO; flagellar protein FliO/FliZ
D UP12_07970 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP
D UP12_07975 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D UP12_07980 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D UP12_07990 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D UP12_07985 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D UP12_07880 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D UP12_07885 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D UP12_07930 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D UP12_07935 flgG; flagellar basal body rod protein FlgG K02390 flgE; flagellar hook protein FlgE
D UP12_17005 flagellar basal body rod protein FlgC K02391 flgF; flagellar basal-body rod protein FlgF
D UP12_17000 flagellar hook-basal body protein FlhP K02392 flgG; flagellar basal-body rod protein FlgG
D UP12_16560 flagellar hook protein FlgK K02396 flgK; flagellar hook-associated protein 1
D UP12_16555 flagellar hook protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D UP12_05960 flagellin K02406 fliC; flagellin
D UP12_06110 flagellin K02406 fliC; flagellin
D UP12_06115 flagellin K02406 fliC; flagellin
D UP12_06120 flagellin K02406 fliC; flagellin
D UP12_06125 flagellin K02406 fliC; flagellin
D UP12_16530 fliD; flagellar capping protein K02407 fliD; flagellar hook-associated protein 2
D UP12_16525 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D UP12_16520 flagellar assembly protein FliT K02423 fliT; flagellar protein FliT
D UP12_06610 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D UP12_06605 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D UP12_16570 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D UP12_01925 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D UP12_02080 L-cystine-binding protein TcyA K02424 tcyA; L-cystine transport system substrate-binding protein
D UP12_11430 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D UP12_15960 RNA polymerase sigma54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D UP12_08030 RNA polymerase sigma factor SigD K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D UP12_15910 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D UP12_05485 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:bpus01501]
D UP12_01000 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D UP12_05690 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D UP12_05695 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D UP12_05700 diguanylate cyclase K15582 oppC; oligopeptide transport system permease protein
D UP12_05705 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D UP12_05710 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D UP12_10010 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D UP12_05145 penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D UP12_11805 beta-lactamase K17838 oxa; beta-lactamase class D [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:bpus01502]
D UP12_02485 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D UP12_02535 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D UP12_06090 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D UP12_02490 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D UP12_07365 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D UP12_07380 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D UP12_09630 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bpus01503]
D UP12_00935 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D UP12_12560 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D UP12_12070 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D UP12_16675 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D UP12_08475 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D UP12_06265 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D UP12_15495 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D UP12_12465 alanine-phosphoribitol ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D UP12_12460 alanine transporter K03739 dltB; membrane protein involved in D-alanine export
D UP12_12455 alanine-phosphoribitol ligase K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D UP12_12450 alanine transporter K03740 dltD; D-alanine transfer protein
D UP12_04255 phosphatidylglycerol lysyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:bpus01000]
C 01001 Protein kinases [BR:bpus01001]
D UP12_07680 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D UP12_02560 serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D UP12_02575 serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D UP12_00405 serine/threonine protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D UP12_16055 tyrosine protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D UP12_13065 alkaline phosphatase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D UP12_15505 histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D UP12_10395 histidine kinase K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D UP12_18890 histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D UP12_13265 histidine kinase K11629 bceS; two-component system, OmpR family, bacitracin resistance sensor histidine kinase BceS [EC:2.7.13.3]
D UP12_06430 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D UP12_14965 histidine kinase K07680 comP; two-component system, NarL family, sensor histidine kinase ComP [EC:2.7.13.3]
D UP12_16605 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D UP12_13245 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D UP12_15545 histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D UP12_02960 histidine kinase K11623 ydfH; two-component system, NarL family, sensor histidine kinase YdfH [EC:2.7.13.3]
D UP12_04810 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D UP12_06750 sporulation kinase K02491 kinA; two-component system, sporulation sensor kinase A [EC:2.7.13.3]
D UP12_14840 sporulation kinase K07697 kinB; two-component system, sporulation sensor kinase B [EC:2.7.13.3]
D UP12_07010 sporulation kinase K07698 kinC; two-component system, sporulation sensor kinase C [EC:2.7.13.3]
D UP12_06595 sporulation kinase K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D UP12_06545 sporulation kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D UP12_03860 histidine kinase K11637 citS; two-component system, CitB family, sensor histidine kinase CitS [EC:2.7.13.3]
D UP12_02440 histidine kinase K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3]
D UP12_14880 histidine kinase K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D UP12_12985 histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D UP12_01580 histidine kinase K11640 natK; two-component system, LytTR family, sensor histidine kinase NatK [EC:2.7.13.3]
D UP12_08010 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D UP12_01555 histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D UP12_15750 histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D UP12_16775 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:bpus01009]
D UP12_13110 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D UP12_07675 protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:bpus01002]
D UP12_07520 peptidase A8 K03101 lspA; signal peptidase II [EC:3.4.23.36]
D UP12_11595 peptidase K06012 gpr; spore protease [EC:3.4.24.78]
D UP12_07425 peptidase K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D UP12_03270 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D UP12_04860 peptidoglycan-binding protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D UP12_09550 D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase K19220 cwlS; peptidoglycan DL-endopeptidase CwlS [EC:3.4.-.-]
D UP12_16235 peptidase C40 K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D UP12_06310 peptidase K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D UP12_03370 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D UP12_09295 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D UP12_01080 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D UP12_13735 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D UP12_05400 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D UP12_14715 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D UP12_04155 peptidase C60 K07284 srtA; sortase A [EC:3.4.22.70]
D UP12_04740 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70]
D UP12_02060 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70]
D UP12_18080 sortase K08600 srtB; sortase B [EC:3.4.22.71]
D UP12_06800 L,D-transpeptidase K16291 erfK; L,D-transpeptidase ErfK/SrfK
D UP12_10350 CAAX protease K07052 K07052; CAAX protease family protein
D UP12_03180 peptidase K07052 K07052; CAAX protease family protein
D UP12_03280 abortive phage infection protein K07052 K07052; CAAX protease family protein
D UP12_05750 oligopeptidase PepB K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D UP12_18345 protease K09607 ina; immune inhibitor A [EC:3.4.24.-]
D UP12_11240 hypothetical protein K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11]
D UP12_09630 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D UP12_15100 aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D UP12_13535 dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D UP12_18240 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D UP12_10825 hypothetical protein K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D UP12_05130 peptidase M20 K01436 yhaA; amidohydrolase [EC:3.5.1.-]
D UP12_02125 hydrolase K21613 scmP; N-acetylcysteine deacetylase [EC:3.5.1.-]
D UP12_01705 amidohydrolase K14665 amhX; amidohydrolase [EC:3.5.1.-]
D UP12_06875 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D UP12_15240 peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D UP12_00835 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D UP12_03910 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D UP12_11060 Xaa-Pro dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D UP12_06995 peptidase M29 K19689 ampS; aminopeptidase [EC:3.4.11.-]
D UP12_09925 peptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D UP12_00420 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D UP12_05175 peptidase M42 K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D UP12_06520 protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D UP12_12255 stage IV sporulation protein FB K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-]
D UP12_08075 zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D UP12_06275 D-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D UP12_11135 spore coat protein K06336 tasA; spore coat-associated protein N
D UP12_10315 protease K24131 prsW; protease PrsW [EC:3.4.-.-]
D UP12_08655 peptidase K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19]
D UP12_06265 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D UP12_15495 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D UP12_10600 peptidase S8 K01342 aprE; subtilisin [EC:3.4.21.62]
D UP12_02845 hypothetical protein K01342 aprE; subtilisin [EC:3.4.21.62]
D UP12_05210 peptidase S8 K01342 aprE; subtilisin [EC:3.4.21.62]
D UP12_18400 hypothetical protein K01342 aprE; subtilisin [EC:3.4.21.62]
D UP12_01435 peptidase S8 K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D UP12_06420 serine protease K13275 isp; major intracellular serine protease [EC:3.4.21.-]
D UP12_17770 peptidase S8 K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D UP12_01495 peptidase S8 K13277 epr; minor extracellular protease Epr [EC:3.4.21.-]
D UP12_08395 serine protease K17734 aprX; serine protease AprX [EC:3.4.21.-]
D UP12_10435 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D UP12_10565 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D UP12_00075 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D UP12_01005 esterase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D UP12_09265 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D UP12_16150 Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D UP12_12375 peptidase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D UP12_12380 Lon protease K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53]
D UP12_07295 hypothetical protein K07177 K07177; Lon-like protease
D UP12_08680 XRE family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D UP12_04595 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D UP12_05285 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D UP12_06980 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D UP12_11140 signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D UP12_01540 alpha/beta hydrolase K22369 EPHX4; epoxide hydrolase 4 [EC:3.3.-.-]
D UP12_16450 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D UP12_09615 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D UP12_13225 signal peptide protein K04773 sppA; protease IV [EC:3.4.21.-]
D UP12_13530 peptidase S51 K05995 pepE; dipeptidase E [EC:3.4.13.21]
D UP12_11260 peptidase S54 K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
D UP12_10945 peptidase S55 K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D UP12_06300 peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D UP12_17435 peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D UP12_03075 peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D UP12_17420 peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D UP12_12640 peptidase U35 K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D UP12_07865 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D UP12_06185 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D UP12_11935 protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D UP12_11940 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D UP12_08670 hypothetical protein K23598 iseA; iseA protein
C 01003 Glycosyltransferases [BR:bpus01003]
D UP12_09840 diacylglycerol glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D UP12_10010 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D UP12_05145 penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D UP12_14865 penicillin-binding protein K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D UP12_17465 penicillin-binding protein K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D UP12_16735 N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D UP12_16725 poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D UP12_16620 glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D UP12_04315 glycosyltransferase K25617 csbB; lipoteichoic acid polyisoprenyl-phosphate beta-N-acetylglucosaminyltransferase [EC:2.4.-.-]
D UP12_04320 hypothetical protein K25619 yfhO; lipoteichoic acid glycosylation protein
D UP12_16040 glycosyl transferase K19423 epsE; glycosyltransferase EpsE [EC:2.4.-.-]
D UP12_16035 glycosyl transferase K19424 epsF; glycosyltransferase EpsF [EC:2.4.-.-]
D UP12_16025 glycosyl transferase K19425 epsH; glycosyltransferase EpsH [EC:2.4.-.-]
D UP12_16655 glycosyl transferase family 1 K16697 tuaC; teichuronic acid biosynthesis glycosyltransferase TuaC [EC:2.4.-.-]
D UP12_16630 glycosyl transferase K16698 tuaG; teichuronic acid biosynthesis glycosyltransferase TuaG [EC:2.4.-.-]
D UP12_16625 teichuronic acid biosynthesis glycosyltransferase tuaH K16699 tuaH; teichuronic acid biosynthesis glycosyltransferase TuaH [EC:2.4.-.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:bpus01005]
D UP12_16620 glycosyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bpus01011]
D UP12_17155 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D UP12_17315 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D UP12_07385 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D UP12_13440 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D UP12_07370 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D UP12_07360 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D UP12_02485 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D UP12_02535 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D UP12_06090 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D UP12_12530 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D UP12_06300 peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D UP12_17435 peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D UP12_03075 peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D UP12_17420 peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D UP12_07365 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D UP12_07380 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D UP12_14695 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D UP12_17030 UDP-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D UP12_08550 bacitracin ABC transporter permease K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D UP12_10010 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D UP12_05145 penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D UP12_14865 penicillin-binding protein K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D UP12_17465 penicillin-binding protein K21464 pbpG; penicillin-binding protein 2D [EC:2.4.99.28 3.4.16.4]
D UP12_07350 penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B
D UP12_07355 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D UP12_11315 penicillin-binding protein K21465 pbpA; penicillin-binding protein A
D UP12_06745 penicillin-binding protein K21466 pbpH; penicillin-binding protein H
D UP12_03745 penicillin-binding protein K21467 pbpC; penicillin-binding protein 3
D UP12_11915 penicillin-binding protein K21468 pbpI; penicillin-binding protein 4B
D UP12_10435 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D UP12_10565 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D UP12_00075 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D UP12_09265 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D UP12_01005 esterase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D UP12_06800 L,D-transpeptidase K16291 erfK; L,D-transpeptidase ErfK/SrfK
D UP12_09630 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D UP12_04860 peptidoglycan-binding protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D UP12_16235 peptidase C40 K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D UP12_09550 D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase K19220 cwlS; peptidoglycan DL-endopeptidase CwlS [EC:3.4.-.-]
D UP12_15240 peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D UP12_04155 peptidase C60 K07284 srtA; sortase A [EC:3.4.22.70]
D UP12_04740 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70]
D UP12_02060 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70]
D UP12_18080 sortase K08600 srtB; sortase B [EC:3.4.22.71]
D UP12_11950 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D UP12_10310 spore cortex-lytic protein K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D UP12_17150 stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D UP12_00935 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D UP12_12560 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D UP12_12070 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D UP12_16675 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D UP12_08475 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:bpus01004]
D UP12_07745 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D UP12_05640 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D UP12_05645 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D UP12_01265 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D UP12_06240 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_08265 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_07750 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_13170 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_06730 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_06235 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D UP12_16990 hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D UP12_05845 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D UP12_04370 enoyl-ACP reductase K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D UP12_13240 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D UP12_13310 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UP12_13395 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UP12_09120 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D UP12_12875 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D UP12_05195 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D UP12_09150 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D UP12_07740 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D UP12_08785 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D UP12_04880 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:bpus01008]
D UP12_09905 chalcone synthase K16167 bpsA; alkylresorcinol/alkylpyrone synthase
D UP12_02000 peptide synthetase K15654 srfAA; surfactin/lichenysin synthetase A
D UP12_02005 peptide synthetase K15655 srfAB; surfactin/lichenysin synthetase B
D UP12_02010 peptide synthetase K15656 srfAC; surfactin/lichenysin synthetase C
D UP12_19000 protein mbtH K05375 mbtH; MbtH protein
D UP12_18990 Isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D UP12_18985 entE; enterobactin synthase subunit E K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D UP12_18995 diguanylate cyclase K04780 dhbF; glyine---[glycyl-carrier protein] ligase [EC:6.2.1.66]
D UP12_01825 cupin K14673 whiEII; putative monooxygenase
D UP12_09900 hypothetical protein K16168 bpsB; methyltransferase
D UP12_02025 thioesterase K15657 srfATE; external thioesterase TEII
D UP12_06030 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:bpus01006]
D UP12_10970 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D UP12_10220 heptaprenyl diphosphate synthase K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D UP12_10210 heptaprenyl diphosphate synthase K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D UP12_08060 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D UP12_05415 phytoene synthase K10208 crtM; 4,4'-diapophytoene synthase [EC:2.5.1.96]
D UP12_08435 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D UP12_13920 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D UP12_07205 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:bpus01007]
D UP12_00610 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D UP12_13390 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D UP12_05685 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D UP12_00620 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D UP12_17440 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D UP12_00255 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D UP12_07510 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D UP12_12315 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D UP12_13655 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D UP12_00485 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D UP12_12060 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D UP12_10030 asnC; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D UP12_12065 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D UP12_11460 glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D UP12_11455 glycine-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D UP12_00095 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D UP12_08080 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D UP12_01315 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D UP12_04125 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D UP12_13000 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D UP12_11985 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D UP12_12920 pheS; phenylalanine--tRNA ligase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D UP12_12915 phenylalanyl-tRNA synthase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D UP12_06565 aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D UP12_06755 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D UP12_14815 aromatic amino acid aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D UP12_10150 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D UP12_08330 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D UP12_14835 cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D UP12_15945 rocD; ornithine--oxo-acid aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D UP12_05580 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D UP12_02170 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D UP12_05450 2,4-diaminobutyrate 4-aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D UP12_04780 aminotransferase K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D UP12_04425 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D UP12_12335 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D UP12_04935 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D UP12_17970 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D UP12_12435 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D UP12_05105 MFS transporter K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D UP12_15280 aminotransferase V K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
C 00199 Cytochrome P450 [BR:bpus00199]
D UP12_08650 NADPH--cytochrome P450 reductase K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
D UP12_18945 cytochrome P450 K23138 CYP109; cytochrome P450 family 109 [EC:1.14.-.-]
D UP12_09345 cytochrome P450 K23138 CYP109; cytochrome P450 family 109 [EC:1.14.-.-]
C 00194 Photosynthesis proteins [BR:bpus00194]
D UP12_17175 ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D UP12_17180 ATP F0F1 synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D UP12_17185 ATP synthase F0F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D UP12_17190 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D UP12_17195 ATP synthase F0F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D UP12_17200 ATP synthase F0F1 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D UP12_17205 ATP synthase F0F1 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D UP12_17210 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D UP12_17215 ATP synthase I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:bpus03000]
D UP12_19520 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D UP12_12740 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D UP12_04200 ABC transporter substrate-binding protein K21701 btr; AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
D UP12_19005 AraC family transcriptional regulator K21701 btr; AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
D UP12_06350 cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D UP12_09300 LysR family transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D UP12_06040 LysR family transcriptional regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D UP12_03700 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D UP12_18505 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D UP12_06965 DeoR faimly transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D UP12_17015 stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D UP12_09170 DNA-binding protein K06608 iolR; DeoR family transcriptional regulator, myo-inositol catabolism operon repressor
D UP12_11450 transcriptional repressor CcpN K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D UP12_16885 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D UP12_09015 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D UP12_13415 catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D UP12_18510 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D UP12_18670 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D UP12_01860 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D UP12_16800 LacI family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D UP12_01725 NTD biosynthesis operon regulator NtdR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D UP12_15605 LacI family transcriptional regulator K26609 exuR; LacI family transcriptional regulator, galacturonate utilization repressor
D UP12_11765 GntR family transcriptional regulator K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D UP12_03965 trehalose operon transcriptional repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D UP12_18720 GntR family transcriptional regulator K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA
D UP12_10760 GntR family transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D UP12_16340 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D UP12_08230 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D UP12_15955 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D UP12_05255 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D UP12_02165 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D UP12_13695 GntR family transcriptional regulator K07979 ytrA; GntR family transcriptional regulator
D UP12_12870 TetR family transcriptional regulator K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein
D UP12_01250 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D UP12_10490 transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D UP12_06055 transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D UP12_01205 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D UP12_01505 transcriptional regulator K18939 lmrA; TetR/AcrR family transcriptional regulator, lmrAB and yxaGH operons repressor
D UP12_08645 TetR family transcriptional regulator K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon
D UP12_13350 transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D UP12_01940 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D UP12_17595 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D UP12_16935 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D UP12_12785 LuxR family transcriptional regulator K01994 gerE; LuxR family transcriptional regulator, transcriptional regulator of spore coat protein
D UP12_05085 transcriptional regulator Hpr K09682 hpr; MarR family transcriptional regulator, protease production regulatory protein HPr
D UP12_03005 transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D UP12_06480 MarR family transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D UP12_06600 transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D UP12_06400 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D UP12_05945 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D UP12_15660 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D UP12_05955 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D UP12_08495 MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D UP12_18435 transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D UP12_04890 MerR family transcriptional regulator K11923 cueR; MerR family transcriptional regulator, copper efflux regulator
D UP12_02865 transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D UP12_06470 MerR family transcriptional regulator K23776 tnrA; MerR family transcriptional regulator, global nitrogen regulator
D UP12_03795 MerR family transcriptional regulator K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon
D UP12_10590 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D UP12_11370 Fur family transcriptional regulator K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D UP12_04435 Fur family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D UP12_04840 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D UP12_12045 Rrf2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D UP12_08835 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D UP12_09435 ArsR family transcriptional regulator K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D UP12_11130 transcriptional regulator K19449 sinR; XRE family transcriptional regulator, master regulator for biofilm formation
D UP12_03025 DNA-binding protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D UP12_16065 transcriptional regulator K19417 slrR; XRE family transcriptional regulator, biofilm formation regulator
D UP12_03890 PadR family transcriptional regulator K26739 padR; PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulator
D UP12_01465 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D UP12_06330 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D UP12_13275 DNA-binding protein K10947 K10947; PadR family transcriptional regulator
D UP12_11090 manganese transport transcriptional regulator K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D UP12_03640 RpiR family transcriptional regulator K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator
D UP12_18255 RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D UP12_18470 RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D UP12_01015 RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D UP12_12805 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D UP12_10060 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D UP12_04270 transcriptional regulator K20480 nprR; HTH-type transcriptional regulator, quorum sensing regulator NprR
D UP12_15835 XRE family transcriptional regulator K22299 rghR; HTH-type transcriptional regulator, competence development regulator
D UP12_15830 XRE family transcriptional regulator K22299 rghR; HTH-type transcriptional regulator, competence development regulator
D UP12_14110 transcriptional regulator K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator
D UP12_15865 MarR family transcriptional regulator K22301 opcR; HTH-type transcriptional regulator, osmoprotectant uptake regulator
D UP12_00300 purine operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D UP12_02620 acetoin dehydrogenase K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D UP12_04350 hypothetical protein K26990 rsoA; sigma-O factor regulatory protein RsoA
D UP12_09185 carbohydrate diacid regulator K02647 cdaR; carbohydrate diacid regulator
D UP12_18580 sugar diacid utilization regulator K02647 cdaR; carbohydrate diacid regulator
D UP12_09670 ATPase AAA K06714 rocR; arginine utilization regulatory protein
D UP12_15950 ATPase AAA K06714 rocR; arginine utilization regulatory protein
D UP12_03155 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D UP12_07875 transcriptional repressor CodY K03706 codY; transcriptional pleiotropic repressor
D UP12_01190 XRE family transcriptional regulator K07729 K07729; putative transcriptional regulator
D UP12_18655 XRE family transcriptional regulator K07729 K07729; putative transcriptional regulator
D UP12_02540 antitoxin endoai K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D UP12_18290 transcription antiterminator LicT K03488 licT; beta-glucoside operon transcriptional antiterminator
D UP12_01375 transcription antiterminator LicT K03488 licT; beta-glucoside operon transcriptional antiterminator
D UP12_18615 transcription antiterminator BglG K03488 licT; beta-glucoside operon transcriptional antiterminator
D UP12_17760 levansucrase K26932 sacT; sacPA operon transcriptional antiterminator
D UP12_06695 PtsGHI operon antiterminator K03480 glcT; transcriptional antiterminator
D UP12_02295 PTS sugar transporter subunit IIA K03483 mtlR; mannitol operon transcriptional activator
D UP12_09035 PTS N-acetylgalactosamine transporter subunit IID K03483 mtlR; mannitol operon transcriptional activator
D UP12_18005 PTS fructose transporter subunit IIA K03491 licR; probable licABCH operon transcriptional regulator
D UP12_18170 transcriptional regulator K03491 licR; probable licABCH operon transcriptional regulator
D UP12_01405 transcription antiterminator K03491 licR; probable licABCH operon transcriptional regulator
D UP12_15775 transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D UP12_03405 transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D UP12_04775 family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D UP12_15265 transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D UP12_01910 hypothetical protein K23253 putR; PucR family transcriptional regulator, proline-responsive transcriptional activator
D UP12_07005 AbrB family transcriptional regulator K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D UP12_00250 transition state regulator Abh K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D UP12_02065 transcriptional regulator K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D UP12_15820 transition state regulator Abh K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D UP12_00345 stage VI sporulation protein D K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D UP12_19135 plasmid partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D UP12_19150 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D UP12_02855 transcription factor YdeB K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D UP12_08380 transcription factor YdeB K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D UP12_04785 glycerol-3-phosphate responsive antiterminator GlpP K02443 glpP; glycerol uptake operon antiterminator
D UP12_10955 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D UP12_09370 XylR family transcriptional regulator K02565 nagC; N-acetylglucosamine repressor
D UP12_11570 HrcA family transcriptional regulator K03705 hrcA; heat-inducible transcriptional repressor
D UP12_05810 thiaminase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D UP12_18320 TenA family transcriptional regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D UP12_05815 transcriptional regulator K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D UP12_00565 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D UP12_16355 membrane protein K03973 pspC; phage shock protein C
D UP12_15935 central glycolytic genes regulator K05311 cggR; central glycolytic genes regulator
D UP12_18380 RNA polymerase sigma70 K05346 deoR; deoxyribonucleoside regulator
D UP12_07440 transcriptional regulator K05346 deoR; deoxyribonucleoside regulator
D UP12_05625 transcriptional regulator K05519 med; transcriptional activator of comK gene
D UP12_10225 transcription attenuation protein MtrB K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein)
D UP12_07530 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D UP12_17505 Prespore-specific transcriptional regulator RsfA K06314 rsfA; prespore-specific regulator
D UP12_06715 transcriptional regulator K06315 splA; transcriptional regulator of the spore photoproduct lyase operon
D UP12_03205 protease K07734 paiB; transcriptional regulator
D UP12_13025 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D UP12_05240 competence protein K02250 comK; competence protein ComK
D UP12_07335 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
D UP12_04335 integral inner membrane protein K26991 yvrL; membrane-bound negative regulator
C 03021 Transcription machinery [BR:bpus03021]
D UP12_00865 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D UP12_00680 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D UP12_00685 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D UP12_17345 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D UP12_07640 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D UP12_11430 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D UP12_01055 RNA polymerase sigma factor SigW K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D UP12_10390 RNA polymerase sigma factor SigX K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D UP12_18035 RNA polymerase sigma factor SigY K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D UP12_07125 RNA polymerase sigma70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D UP12_19050 RNA polymerase sigma70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D UP12_04875 RNA polymerase sigma factor SigM K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D UP12_04220 RNA polymerase sigma70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D UP12_02580 RNA polymerase sigma factor SigB K03090 sigB; RNA polymerase sigma-B factor
D UP12_11695 RNA polymerase sigma 70 K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D UP12_10550 sporulation sigma factor SigF K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D UP12_07430 sporulation sigma factor SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D UP12_07435 sporulation sigma factor SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D UP12_00640 RNA polymerase factor sigma-70 K27000 sigH; RNA polymerase sigma-H factor
D UP12_06500 RNA polymerase sigma factor SigI K03093 sigI; RNA polymerase sigma-I factor
D UP12_04345 RNA polymerase sigma70 K26992 sigO; RNA polymerase sigma-O factor
D UP12_15960 RNA polymerase sigma54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D UP12_08030 RNA polymerase sigma factor SigD K02405 fliA; RNA polymerase sigma factor FliA
D UP12_14650 positive control sigma-like factor K24072 xpf; positive control factor
D UP12_08115 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D UP12_10990 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D UP12_00650 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D UP12_02560 serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D UP12_02555 RsbT antagonist protein RsbS K17762 rsbS; rsbT antagonist protein RsbS
D UP12_02550 RsbT co-antagonist protein RsbRA K17763 rsbR; rsbT co-antagonist protein RsbR
D UP12_11200 RsbT co-antagonist protein RsbRD K17763 rsbR; rsbT co-antagonist protein RsbR
D UP12_08665 RsbT co-antagonist protein RsbRB K17763 rsbR; rsbT co-antagonist protein RsbR
D UP12_02135 histidine kinase K17763 rsbR; rsbT co-antagonist protein RsbR
D UP12_02565 phosphoserine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D UP12_02585 phosphoserine phosphatase K05518 rsbX; phosphoserine phosphatase RsbX [EC:3.1.3.3]
D UP12_02570 anti-sigma-B factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D UP12_02575 serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D UP12_11920 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D UP12_17305 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:bpus03019]
D UP12_07760 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D UP12_07030 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D UP12_08210 Zn-dependent hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D UP12_08300 ribonuclease K18682 rny; ribonucrease Y [EC:3.1.-.-]
D UP12_15805 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D UP12_05050 3'-5' exonuclease K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D UP12_02505 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D UP12_13235 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D UP12_11400 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D UP12_10355 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D UP12_09480 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D UP12_15910 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UP12_08160 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D UP12_17305 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D UP12_13110 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D UP12_11560 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D UP12_03190 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D UP12_08440 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D UP12_16540 carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D UP12_16220 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:bpus03011]
D UP12_10285 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D UP12_08040 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D UP12_00755 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D UP12_13360 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D UP12_00810 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D UP12_19100 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D UP12_00700 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D UP12_00795 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D UP12_00900 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D UP12_00720 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D UP12_00860 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D UP12_00695 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D UP12_00855 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D UP12_00790 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D UP12_17115 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D UP12_08155 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D UP12_07785 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D UP12_00770 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D UP12_19090 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D UP12_00745 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D UP12_11600 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D UP12_11530 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D UP12_00660 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D UP12_00740 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D UP12_00725 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D UP12_00730 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D UP12_00785 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D UP12_00800 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D UP12_19025 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D UP12_00665 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D UP12_00655 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D UP12_00670 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D UP12_00895 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D UP12_00775 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D UP12_00820 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D UP12_00760 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D UP12_00870 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D UP12_00805 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D UP12_07810 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D UP12_12955 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D UP12_12250 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D UP12_00750 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D UP12_00735 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D UP12_00780 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D UP12_12240 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D UP12_07705 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D UP12_00765 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D UP12_00815 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D UP12_13860 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D UP12_17300 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D UP12_07310 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D UP12_17105 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D UP12_11275 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D UP12_12960 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D UP12_00850 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D UP12_00325 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D UP12_00690 50S ribosomal protein L7 K07590 RP-L7A; large subunit ribosomal protein L7A
D UP12_04460 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_00060 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_00180 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_00500 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_00560 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_00970 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_03105 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_14040 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_03095 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_00040 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_00550 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_00960 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_14050 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_00160 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_00490 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_04450 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_00555 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_00175 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_04455 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_00055 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_00495 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_00965 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_03100 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_14045 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:bpus03009]
D UP12_07760 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D UP12_11470 era; GTPase Era K03595 era; GTPase
D UP12_12230 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D UP12_08115 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D UP12_10990 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D UP12_00650 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D UP12_13550 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D UP12_00275 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D UP12_07665 16S rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D UP12_00675 16S rRNA methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D UP12_07275 rRNA methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D UP12_11545 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D UP12_19155 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D UP12_07340 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D UP12_00245 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D UP12_10960 RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D UP12_00630 RNA methyltransferase TrmH K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D UP12_18830 50S rRNA methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D UP12_17915 50S rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D UP12_07670 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D UP12_04080 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D UP12_03610 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D UP12_10420 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D UP12_05795 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D UP12_07525 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D UP12_04745 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D UP12_03135 alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D UP12_11340 alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D UP12_09325 alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D UP12_02415 GCN5 family acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D UP12_07800 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D UP12_11550 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D UP12_11975 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D UP12_00625 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D UP12_02505 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D UP12_13235 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D UP12_11400 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D UP12_07685 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D UP12_10260 engA; GTP-binding protein Der K03977 engA; GTPase
D UP12_07815 GTPase K14540 rbgA; ribosome biogenesis GTPase A
D UP12_08485 GTPase K03665 hflX; GTPase
D UP12_11665 GTPase K06948 yqeH; 30S ribosome assembly GTPase
D UP12_17250 tRNA threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D UP12_12080 (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D UP12_08140 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D UP12_08110 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D UP12_00015 hypothetical protein K14761 rlbA; ribosome-associated protein
D UP12_11640 ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D UP12_11485 rRNA maturation factor K07042 ybeY; probable rRNA maturation factor
D UP12_11655 RNA-binding protein K07574 yhbY; RNA-binding protein
D UP12_16505 sigma-54 modulation protein K05808 hpf; ribosome hibernation promoting factor
D UP12_19105 GTP-binding protein K06942 ychF; ribosome-binding ATPase
D UP12_07305 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:bpus03016]
D UP12_10750 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D UP12_10065 tRNA CCA-pyrophosphorylase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D UP12_08080 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D UP12_01315 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D UP12_07510 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D UP12_13655 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D UP12_00255 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D UP12_17440 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D UP12_00485 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D UP12_12060 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D UP12_11985 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D UP12_10030 asnC; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D UP12_04125 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D UP12_13000 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D UP12_00095 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D UP12_00620 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D UP12_12315 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D UP12_12065 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D UP12_12920 pheS; phenylalanine--tRNA ligase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D UP12_12915 phenylalanyl-tRNA synthase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D UP12_13390 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D UP12_05685 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D UP12_12075 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D UP12_05110 protein hit K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D UP12_13495 tRNA (guanine-N7)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D UP12_00890 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D UP12_08145 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D UP12_13325 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UP12_12040 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UP12_12210 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UP12_17250 tRNA threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D UP12_08435 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D UP12_19165 tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D UP12_19160 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D UP12_19180 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D UP12_19185 bacterial RNase P K01978 rnpB; M1 RNA
D UP12_12520 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D UP12_13520 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D UP12_11460 glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D UP12_11455 glycine-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D UP12_00610 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D UP12_03695 prolyl-tRNA synthetase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D UP12_00130 adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D UP12_00480 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D UP12_08340 dimethylallyladenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D UP12_11540 30S ribosomal protein S12 methylthiotransferase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D UP12_18420 SAM-dependent methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D UP12_07855 gid; tRNA (uracil-5-)-methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D UP12_07805 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D UP12_11420 SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D UP12_04655 tRNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D UP12_12925 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D UP12_12035 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D UP12_01305 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D UP12_15140 hypothetical protein K13628 iscA; iron-sulfur cluster assembly protein
D UP12_12140 S-adenosylmethionine tRNA ribosyltransferase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D UP12_06625 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D UP12_06630 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D UP12_06635 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D UP12_06640 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D UP12_04645 epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D UP12_12135 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D UP12_13320 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D UP12_00410 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D UP12_03130 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D UP12_03140 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D UP12_03125 ATP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D UP12_12055 hypothetical protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D UP12_07300 hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D UP12_15805 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D UP12_08160 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:bpus03012]
D UP12_08130 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D UP12_12965 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D UP12_03145 multidrug ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D UP12_08045 elongation factor Ts K02357 tsf; elongation factor Ts
D UP12_00710 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D UP12_00705 fusA; elongation factor G K02355 fusA; elongation factor G
D UP12_17275 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D UP12_08055 ribosome recycling factor K02838 frr; ribosome recycling factor
D UP12_17270 SAM-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D UP12_00330 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D UP12_00845 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D UP12_11055 elongation factor P K02356 efp; elongation factor P
D UP12_16495 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:bpus03110]
D UP12_00580 Clp protease ClpX K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D UP12_06615 Clp protease ClpX K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D UP12_12385 ATP-dependent protease K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D UP12_07870 Clp protease ATPase K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D UP12_11560 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D UP12_03190 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D UP12_11555 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D UP12_00430 heat shock protein Hsp33 K04083 hslO; molecular chaperone Hsp33
D UP12_11565 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D UP12_03765 hypothetical protein K13993 HSP20; HSP20 family protein
D UP12_09585 spore gernimation protein GerT K13993 HSP20; HSP20 family protein
D UP12_03185 hypothetical protein K04078 groES; chaperonin GroES
D UP12_06265 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D UP12_15495 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D UP12_00420 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D UP12_17210 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D UP12_10600 peptidase S8 K01342 aprE; subtilisin [EC:3.4.21.62]
D UP12_02845 hypothetical protein K01342 aprE; subtilisin [EC:3.4.21.62]
D UP12_05210 peptidase S8 K01342 aprE; subtilisin [EC:3.4.21.62]
D UP12_18400 hypothetical protein K01342 aprE; subtilisin [EC:3.4.21.62]
D UP12_01435 peptidase S8 K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D UP12_06420 serine protease K13275 isp; major intracellular serine protease [EC:3.4.21.-]
D UP12_17770 peptidase S8 K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D UP12_01495 peptidase S8 K13277 epr; minor extracellular protease Epr [EC:3.4.21.-]
D UP12_10500 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D UP12_05060 prsA; peptidylprolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D UP12_12845 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:bpus04131]
D UP12_10205 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D UP12_14085 membrane protein K07192 FLOT; flotillin
D UP12_06340 DNA-binding protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D UP12_15930 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D UP12_04565 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D UP12_13105 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D UP12_06770 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:bpus03032]
D UP12_09865 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D UP12_09875 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D UP12_19520 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D UP12_12740 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D UP12_10235 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D UP12_00005 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D UP12_14415 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D UP12_18955 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D UP12_12760 phage protein K02315 dnaC; DNA replication protein DnaC
D UP12_11435 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D UP12_13020 Replication initiation and membrane attachment protein K03346 dnaB; replication initiation and membrane attachment protein
D UP12_13015 primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D UP12_19095 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UP12_19455 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UP12_13130 dnaE; DNA polymerase III DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D UP12_08085 polC; DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D UP12_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UP12_11605 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D UP12_00220 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D UP12_00135 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D UP12_07820 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D UP12_12910 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D UP12_13060 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D UP12_03475 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D UP12_09885 5'-3' exonuclease K23786 exoA; 5'-3' exonuclease [EC:3.1.11.-]
D UP12_00035 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D UP12_00030 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D UP12_08805 DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D UP12_08800 gyrB; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D UP12_07850 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D UP12_19335 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D UP12_02355 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:bpus03036]
D UP12_19520 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D UP12_12740 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D UP12_07760 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D UP12_14085 membrane protein K07192 FLOT; flotillin
D UP12_06900 repressor K26248 rok; repressor Rok
D UP12_10235 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D UP12_00005 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D UP12_13825 general stress protein K04047 dps; starvation-inducible DNA-binding protein
D UP12_08440 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D UP12_01940 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D UP12_17595 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D UP12_16935 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D UP12_07765 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D UP12_10450 segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D UP12_10445 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D UP12_07410 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D UP12_00375 cell division protein DIVIC K13052 divIC; cell division protein DivIC
D UP12_16470 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D UP12_13445 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D UP12_15055 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D UP12_08225 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D UP12_07345 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D UP12_07390 dihydropteridine reductase K03589 ftsQ; cell division protein FtsQ
D UP12_07185 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D UP12_07375 stage V sporulation protein E K03588 ftsW; cell division protein FtsW
D UP12_14080 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D UP12_16465 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D UP12_07415 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D UP12_12905 cell division protein ZapA K09888 zapA; cell division protein ZapA
D UP12_00935 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D UP12_12560 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D UP12_12070 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D UP12_16675 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D UP12_08475 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D UP12_13340 septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator
D UP12_12270 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC
D UP12_12265 cell division inhibitor MinD K03609 minD; septum site-determining protein MinD
D UP12_07505 septum formation initiator K04074 divIVA; cell division initiation protein
D UP12_07490 cell division protein SepF K09772 sepF; cell division inhibitor SepF
D UP12_07000 rod-share determining protein MreBH K03569 mreB; rod shape-determining protein MreB and related proteins
D UP12_17010 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D UP12_12285 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D UP12_12280 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D UP12_12275 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D UP12_17790 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D UP12_14075 cell cycle protein K05837 rodA; rod shape determining protein RodA
D UP12_19140 sporulation initiation inhibitor Soj K03496 parA; chromosome partitioning protein
D UP12_19135 plasmid partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D UP12_19150 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D UP12_08805 DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D UP12_08800 gyrB; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D UP12_19160 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D UP12_19155 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D UP12_07855 gid; tRNA (uracil-5-)-methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D UP12_07860 recombinase XerC K03733 xerC; integrase/recombinase XerC
D UP12_10580 recombinase XerD K04763 xerD; integrase/recombinase XerD
D UP12_17280 MerR family transcriptional regulator K11686 racA; chromosome-anchoring protein RacA
D UP12_00355 hypothetical protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D UP12_00940 chromosome partitioning protein ParA K03593 mrp; ATP-binding protein involved in chromosome partitioning
D UP12_19660 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D UP12_12370 engB; GTP-binding protein K03978 engB; GTP-binding protein
D UP12_16210 sporulation regulator WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:bpus03400]
D UP12_06550 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D UP12_07195 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D UP12_17725 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D UP12_04360 DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D UP12_10020 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D UP12_16225 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D UP12_13795 7,8-dihydro-8-oxoguanine-triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D UP12_11710 DNA mismatch repair protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D UP12_06350 cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D UP12_04075 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D UP12_13055 5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D UP12_11395 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D UP12_12090 recombinase RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D UP12_03475 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D UP12_13060 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D UP12_16375 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D UP12_16380 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D UP12_12840 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D UP12_05900 ATP-dependent DNA helicase Rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D UP12_03470 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D UP12_00680 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D UP12_00685 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D UP12_00865 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D UP12_17345 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D UP12_07640 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D UP12_00340 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D UP12_08355 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D UP12_12890 recombination and DNA strand exchange inhibitor protein K07456 mutS2; DNA mismatch repair protein MutS2
D UP12_08360 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D UP12_10980 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D UP12_10975 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D UP12_13130 dnaE; DNA polymerase III DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D UP12_08085 polC; DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D UP12_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D UP12_11605 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D UP12_00220 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D UP12_00135 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D UP12_19095 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UP12_19455 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UP12_12025 hypothetical protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D UP12_08295 recombinase RecA K03553 recA; recombination protein RecA
D UP12_12155 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D UP12_12150 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D UP12_07650 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D UP12_05330 DNA repair exonuclease K03546 sbcC; DNA repair protein SbcC/Rad50
D UP12_05325 nuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D UP12_00585 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D UP12_00020 recombinase RecF K03629 recF; DNA replication and repair protein RecF
D UP12_07730 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D UP12_11465 DNA recombination protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D UP12_00145 recombinase RecR K06187 recR; recombination protein RecR
D UP12_10950 DNA recombination protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D UP12_10005 Holliday junction resolvase K03700 recU; recombination protein U
D UP12_05320 ATP-dependent helicase K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D UP12_05315 ATP-dependent helicase K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D UP12_08585 DNA repair protein K10979 ku; DNA end-binding protein Ku
D UP12_08580 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D UP12_00035 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D UP12_00030 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D UP12_07850 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D UP12_10235 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D UP12_14440 recombinase RecT K07455 recT; recombination protein RecT
D UP12_10355 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D UP12_09480 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D UP12_10800 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D UP12_19385 UV damage repair protein UvrX K03502 umuC; DNA polymerase V
D UP12_08680 XRE family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D UP12_04295 recombinase RecX K03565 recX; regulatory protein
D UP12_12895 hypothetical protein K02347 polX; DNA polymerase (family X)
D UP12_09930 ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D UP12_10040 DNA polymerase III subunit epsilon K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D UP12_08460 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D UP12_08465 ribonucleotide-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D UP12_13150 oligoribonuclease K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:bpus03029]
D UP12_08130 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D UP12_12965 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D UP12_08045 elongation factor Ts K02357 tsf; elongation factor Ts
D UP12_00710 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D UP12_00705 fusA; elongation factor G K02355 fusA; elongation factor G
D UP12_11470 era; GTPase Era K03595 era; GTPase
D UP12_13390 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D UP12_13655 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D UP12_12060 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D UP12_17440 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D UP12_03580 gatA; glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D UP12_03585 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D UP12_03575 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D UP12_19095 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UP12_19455 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D UP12_11560 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D UP12_11565 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D UP12_03190 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D UP12_03185 hypothetical protein K04078 groES; chaperonin GroES
D UP12_11555 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D UP12_13325 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UP12_12040 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UP12_12210 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UP12_00940 chromosome partitioning protein ParA K03593 mrp; ATP-binding protein involved in chromosome partitioning
D UP12_07205 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D UP12_07200 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D UP12_19175 OxaA-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UP12_10815 OxaA-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UP12_09745 cysteine ABC transporter ATP-binding protein K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:bpus02000]
D UP12_04390 multidrug ABC transporter ATP-binding protein K24708 K24708; ATP-binding cassette, subfamily B, putative efflux pump [EC:7.6.2.-]
D UP12_04945 multidrug ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D UP12_04950 multidrug ABC transporter permease K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D UP12_09305 multidrug ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D UP12_09310 ABC transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D UP12_04210 multidrug ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D UP12_17425 multidrug ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D UP12_17085 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D UP12_18045 ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D UP12_18050 ATP-binding/permease CydC K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D UP12_16095 ABC transporter K19349 vga; pleuromutilin/lincosamide/streptogramin A transport system ATP-binding/permease protein
D UP12_03790 multidrug ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D UP12_15675 molybdenum ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D UP12_15680 molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein
D UP12_01980 ABC transporter ATP-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D UP12_01995 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D UP12_01990 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D UP12_01985 sugar ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D UP12_01690 glycine/betaine ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein
D UP12_01685 glycine/betaine ABC transporter K02001 proW; glycine betaine/proline transport system permease protein
D UP12_01680 glycine/betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D UP12_19080 glycine/betaine ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein
D UP12_15850 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D UP12_15845 amino acid ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D UP12_15855 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D UP12_19085 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D UP12_15860 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D UP12_13780 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D UP12_13790 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D UP12_13785 spermidine/putrescine ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D UP12_04965 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D UP12_18515 cyclodextrin-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D UP12_18520 arabinogalactan ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D UP12_18525 arabinogalactan oligomer transport system permease GanQ K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D UP12_09010 binding protein msmE K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D UP12_09005 glycerol-3-phosphate ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D UP12_09000 maltose ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D UP12_16765 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D UP12_16760 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D UP12_16755 ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D UP12_16910 D-ribose transporter subunit RbsB K10439 rbsB; ribose transport system substrate-binding protein
D UP12_16905 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D UP12_16900 D-ribose transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D UP12_13635 peptide ABC transporter substrate-binding protein K25673 ytcQ; polygalacturonan/rhamnogalacturonan transport system substrate-binding protein
D UP12_13610 protein lplB K25674 yteP; polygalacturonan/rhamnogalacturonan transport system permease protein
D UP12_13640 ABC transporter permease K25675 ytcP; polygalacturonan/rhamnogalacturonan transport system permease protein
D UP12_14890 CD4+ T-cell-stimulating antigen K07335 bmpA; basic membrane protein A and related proteins
D UP12_05505 ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D UP12_14900 branched-chain amino acid ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D UP12_14905 sugar ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D UP12_14895 heme ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D UP12_17960 sugar ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D UP12_17950 sugar ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D UP12_17955 ABC transporter K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D UP12_11310 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D UP12_11305 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D UP12_11300 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D UP12_11290 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D UP12_11295 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D UP12_17935 glutamine ABC transporter substrate-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D UP12_17930 nickel transporter K10037 glnP; glutamine transport system permease protein
D UP12_17925 peptide ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D UP12_12000 amino acid ABC transporter substrate-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D UP12_12005 glutamine ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D UP12_12010 glutamine ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D UP12_11995 amino acid ABC transporter ATPase K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D UP12_01925 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D UP12_02080 L-cystine-binding protein TcyA K02424 tcyA; L-cystine transport system substrate-binding protein
D UP12_01920 cysteine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D UP12_02075 cysteine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D UP12_02070 amino acid ABC transporter ATPase K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D UP12_11820 amino acid ABC transporter substrate-binding protein K16957 tcyK; L-cystine transport system substrate-binding protein
D UP12_11825 amino acid ABC transporter permease K16958 tcyL; L-cystine transport system permease protein
D UP12_11830 ABC transporter permease K16959 tcyM; L-cystine transport system permease protein
D UP12_11815 amino acid ABC transporter ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D UP12_10860 ABC transporter substrate-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D UP12_10855 arginine ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D UP12_10850 peptide ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D UP12_15405 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D UP12_15410 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D UP12_15415 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D UP12_02110 ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D UP12_02115 ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D UP12_02120 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D UP12_17040 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D UP12_17045 cystine transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D UP12_17050 amino acid ABC transporter ATPase K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D UP12_05690 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D UP12_05695 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D UP12_05700 diguanylate cyclase K15582 oppC; oligopeptide transport system permease protein
D UP12_05705 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D UP12_05710 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D UP12_06295 cytochrome C K16199 dppE; dipeptide transport system substrate-binding protein
D UP12_06280 peptide ABC transporter permease K16200 dppB1; dipeptide transport system permease protein
D UP12_06285 diguanylate cyclase K16201 dppC; dipeptide transport system permease protein
D UP12_06290 peptide ABC transporter ATP-binding protein K16202 dppD; dipeptide transport system ATP-binding protein
D UP12_16120 nickel ABC transporter substrate-binding protein K15584 nikA; nickel transport system substrate-binding protein
D UP12_15995 nickel ABC transporter substrate-binding protein K15584 nikA; nickel transport system substrate-binding protein
D UP12_16115 nickel transporter permease NikB K15585 nikB; nickel transport system permease protein
D UP12_15990 nickel transporter permease NikB K15585 nikB; nickel transport system permease protein
D UP12_16110 peptide ABC transporter permease K15586 nikC; nickel transport system permease protein
D UP12_15985 nikC; nickel transporter permease NikC K15586 nikC; nickel transport system permease protein
D UP12_16105 ABC transporter ATP-binding protein K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D UP12_15980 nickel ABC transporter ATP-binding protein K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D UP12_16100 peptide ABC transporter ATP-binding protein K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D UP12_15975 nickel ABC transporter ATP-binding protein K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D UP12_05665 peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D UP12_04405 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D UP12_05670 diguanylate cyclase K02033 ABC.PE.P; peptide/nickel transport system permease protein
D UP12_04410 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D UP12_05675 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D UP12_04415 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D UP12_05655 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D UP12_04395 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D UP12_05660 peptide ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D UP12_13255 ABC transporter substrate-binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D UP12_04205 ABC transporter substrate-binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D UP12_15640 iron(3+)-hydroxamate-binding protein fhuD K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D UP12_16075 iron-hydroxamate ABC transporter substrate-binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D UP12_15635 ferrichrome ABC transporter permease K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D UP12_16085 ferrichrome ABC transporter permease K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D UP12_16080 iron ABC transporter permease K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D UP12_15630 iron ABC transporter permease K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D UP12_15625 fecE; iron-dicitrate transporter ATP-binding subunit K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D UP12_18095 heme ABC transporter substrate-binding protein K25113 htsA; heme transport system substrate-binding protein
D UP12_18090 ABC transporter permease K25114 htsB; heme transport system permease protein
D UP12_18085 iron ABC transporter ATP-binding protein K25115 htsC; heme transport system ATP-binding protein [EC:7.6.2.5]
D UP12_18105 cell surface protein K25118 isdC; iron-regulated surface determinant protein C
D UP12_15305 iron ABC transporter substrate-binding protein K25109 sirA; iron-siderophore transport system substrate-binding protein
D UP12_15300 siderophore ABC transporter permease K25110 sirB; iron-siderophore transport system permease protein
D UP12_15295 iron ABC transporter permease K25111 sirC; iron-siderophore transport system permease protein
D UP12_15480 ABC transporter K25130 fecE; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D UP12_18075 iron-hydroxamate ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D UP12_19010 iron-uptake system-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D UP12_18070 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D UP12_07470 molybdenum ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D UP12_18065 iron ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D UP12_15585 iron ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D UP12_15580 btuC; corrinoid ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D UP12_15575 iron ABC transporter K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D UP12_15730 manganese ABC transporter substrate-binding protein K19975 mntC; manganese transport system substrate-binding protein
D UP12_15725 manganese ABC transporter permease K19976 mntB; manganese transport system permease protein
D UP12_15720 manganese transporter K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D UP12_13855 adhesin K09815 znuA; zinc transport system substrate-binding protein
D UP12_11375 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D UP12_11380 ABC transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D UP12_15085 biotin biosynthesis protein BioC K03523 bioY; biotin transport system substrate-specific component
D UP12_11965 biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component
D UP12_18845 hypothetical protein K16924 mtsT; energy-coupling factor transport system substrate-specific component
D UP12_00885 cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D UP12_18305 cobalt transporter K16785 ecfT; energy-coupling factor transport system permease protein
D UP12_18835 membrane protein K16785 ecfT; energy-coupling factor transport system permease protein
D UP12_00875 cbiO; cobalt transporter ATP-binding subunit K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D UP12_00880 cbiO; cobalt transporter ATP-binding subunit K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D UP12_18840 heme ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D UP12_18310 ABC transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D UP12_18315 ABC transporter ATP-binding protein K16925 ykoE; energy-coupling factor transport system permease protein
D UP12_16710 Teichoic acid translocation permease TagG K09692 tagG; teichoic acid transport system permease protein
D UP12_16705 teichoic acid ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D UP12_01595 protein natB K09696 natB; sodium transport system permease protein
D UP12_01590 ABC transporter ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D UP12_13285 bacitracin ABC transporter permease K11632 bceB; bacitracin transport system permease protein
D UP12_13280 bacitracin ABC transporter ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein
D UP12_13675 macrolide ABC transporter permease K16918 ytrF; acetoin utilization transport system permease protein
D UP12_13685 ABC transporter ATP-binding protein K16919 ytrC_D; acetoin utilization transport system permease protein
D UP12_13680 ABC transporter ATP-binding protein K16920 ytrE; acetoin utilization transport system ATP-binding protein
D UP12_13690 antibiotic ABC transporter ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D UP12_06960 macrolide ABC transporter permease K24948 yknZ; antimicrobial peptide resistance transport system permease protein
D UP12_06955 macrolide ABC transporter ATP-binding protein K24949 yknY; antimicrobial peptide resistance transport system ATP-binding protein [EC:7.6.2.-]
D UP12_16465 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D UP12_16470 cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D UP12_05120 ecsB K25157 ecsB; ABC-2 type transport system permease protein
D UP12_05115 multidrug ABC transporter ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein
D UP12_05125 ecsC K25159 ecsC; protein EcsC
D UP12_02470 membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D UP12_01135 membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D UP12_18550 ABC transporter ATP-binding protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D UP12_18855 membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D UP12_01185 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D UP12_02465 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D UP12_04610 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D UP12_01130 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D UP12_01145 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D UP12_01180 sodium ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D UP12_18555 bacitracin ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D UP12_18860 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D UP12_15900 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D UP12_18595 ABC transporter ATP-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D UP12_18600 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D UP12_15395 iron ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D UP12_03750 anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D UP12_09560 multidrug transporter MatE K26939 norM; MATE family, multidrug efflux pump
D UP12_05420 transporter K26937 dinF; MATE family, multidrug efflux pump
D UP12_15970 damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D UP12_09260 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump
D UP12_01745 MFS transporter K08174 glcP; MFS transporter, FHS family, glucose/mannose:H+ symporter
D UP12_17130 MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D UP12_01835 glucarate transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D UP12_18680 MFS transporter K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D UP12_18690 MFS transporter K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D UP12_05970 transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D UP12_06045 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D UP12_19020 transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D UP12_01230 glpT; sn-glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D UP12_01475 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D UP12_15275 multidrug transporter K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein
D UP12_02945 multidrug MFS transporter K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein
D UP12_14860 MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D UP12_01320 major facilitator transporter K18567 pbuE; MFS transporter, DHA1 family, purine base/nucleoside efflux pump
D UP12_17590 arabinose transporter permease K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D UP12_17600 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D UP12_03705 MFS transporter K23361 sbnD; MFS transporter, DHA1 family, staphyloferrin B biosynthesis exporter
D UP12_04110 chemotaxis protein K08164 ybcL; MFS transporter, DHA1 family, putative efflux transporter
D UP12_03305 chemotaxis protein K08164 ybcL; MFS transporter, DHA1 family, putative efflux transporter
D UP12_18775 MFS transporter K08164 ybcL; MFS transporter, DHA1 family, putative efflux transporter
D UP12_02880 multidrug MFS transporter K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D UP12_05605 MFS transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D UP12_11235 MFS transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D UP12_08235 MFS transporter K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D UP12_03800 MFS transporter K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D UP12_03740 Fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D UP12_06770 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
D UP12_11320 hypothetical protein K08222 yqgE; MFS transporter, YQGE family, putative transporter
D UP12_01865 membrane protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D UP12_06710 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D UP12_06705 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D UP12_09970 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D UP12_06700 PTS system glucose-specific transporter subunit IICBA K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D UP12_03915 PTS sugar transporter K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D UP12_17755 PTS system sucrose-specific transporter subuits IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D UP12_01010 PTS sugar transporter subunit IIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D UP12_18285 PTS beta-glucoside transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D UP12_18625 PTS beta-glucoside transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D UP12_01380 PTS beta-glucoside transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D UP12_03955 trehalose permease IIC protein K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D UP12_03645 PTS alpha-glucoside transporter subunit IIBC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D UP12_09065 PTS fructose transporter subunit IIBC K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D UP12_01430 PTS glucose transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D UP12_09070 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D UP12_01420 FruA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D UP12_06975 PTS fructose transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D UP12_01425 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D UP12_02205 PTS mannitol transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D UP12_02200 PTS system mannitol-specific transporter subunit IIBC K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D UP12_17990 PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D UP12_18145 PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D UP12_10775 PTS dihydroxyacetone transporter K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D UP12_18000 PTS mannose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D UP12_18150 PTS cellobiose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D UP12_10780 PTS mannose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D UP12_17995 oligo-beta-mannoside permease IIC protein K02761 celB; cellobiose PTS system EIIC component
D UP12_18165 PTS lactose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D UP12_10770 oligo-beta-mannoside permease IIC protein K02761 celB; cellobiose PTS system EIIC component
D UP12_07465 PTS sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D UP12_07460 PTS sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D UP12_07455 PTS sorbitol transporter subunit IIC K02783 srlA; glucitol/sorbitol PTS system EIIC component
D UP12_06190 PTS lichenan transporter subunit IIC K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D UP12_06200 PTS galactitol transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D UP12_06195 gatC; PTS system galactitol-specific transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D UP12_09030 PTS lactose transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D UP12_09025 PTS beta-glucoside transporter subunit IIBC K03475 ulaA; ascorbate PTS system EIIC component
D UP12_04790 glycerol transporter K02440 glpF; glycerol uptake facilitator
D UP12_14775 potassium channel protein K10716 kch; voltage-gated potassium channel
D UP12_17055 ammonia channel protein K03320 amt; ammonium transporter, Amt family
D UP12_17140 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D UP12_17145 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D UP12_00400 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D UP12_16985 mechanosensitive ion channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D UP12_06885 mechanosensitive ion channel protein K22044 ybiO; moderate conductance mechanosensitive channel
D UP12_04040 mechanosensitive ion channel protein MscS K22044 ybiO; moderate conductance mechanosensitive channel
D UP12_06450 magnesium transporter K06213 mgtE; magnesium transporter
D UP12_06610 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D UP12_06605 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D UP12_04065 metal transporter K03284 corA; magnesium transporter
D UP12_04905 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D UP12_04910 chromosome condensation protein CrcB K06199 crcB; fluoride exporter
D UP12_14760 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D UP12_04895 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D UP12_04885 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D UP12_12975 antiholin LrgA K05338 lrgA; holin-like protein
D UP12_17905 holin K06518 cidA; holin-like protein
D UP12_03245 GABA permease K11735 gabP; GABA permease
D UP12_18665 D-alanine/D-serine/glycine permease K11737 cycA; D-serine/D-alanine/glycine transporter
D UP12_01450 amino acid transporter K16235 mmuP; S-methylmethionine transporter
D UP12_02085 amino acid permease K02205 rocE; arginine/ornithine permease
D UP12_15940 amino acid permease K02205 rocE; arginine/ornithine permease
D UP12_01765 transporter K16237 aroP; aromatic amino acid permease
D UP12_09440 Putrescine importer PuuP K14052 puuP; putrescine importer
D UP12_15645 arginine:ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D UP12_15525 spore gernimation protein K06289 gerAB; spore germination protein AB
D UP12_16820 spore gernimation protein K06292 gerBB; spore germination protein BB
D UP12_04170 ligand-binding protein SH3 K18924 ykkC; paired small multidrug resistance pump
D UP12_06355 multidrug resistance protein SMR K18924 ykkC; paired small multidrug resistance pump
D UP12_04165 multidrug resistance protein SMR K18925 ykkD; paired small multidrug resistance pump
D UP12_06360 multidrug resistance protein SMR K18925 ykkD; paired small multidrug resistance pump
D UP12_08415 multidrug transporter K11814 ebrA; multidrug resistance protein EbrA
D UP12_08410 multidrug transporter K11815 ebrB; multidrug resistance protein EbrB
D UP12_10790 glucose transporter GlcU K05340 glcU; glucose uptake protein
D UP12_09580 transporter K05786 rarD; chloramphenicol-sensitive protein RarD
D UP12_09090 membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D UP12_09100 membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D UP12_04215 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D UP12_18270 gluconate permease K06155 gntT; Gnt-I system high-affinity gluconate transporter
D UP12_15095 sodium:proton antiporter K07084 yuiF; putative amino acid transporter
D UP12_18460 permease DsdX K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D UP12_18575 gluconate:proton symporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D UP12_01720 L-lactate permease K03303 lutP; lactate permease
D UP12_13570 glycine/betaine ABC transporter permease K05020 opuD; glycine betaine transporter
D UP12_04020 cation transporter K07300 chaA; Ca2+:H+ antiporter
D UP12_07585 sulfate permease K16331 ylnA; sulfate permease
D UP12_17875 symporter K14393 actP; cation/acetate symporter
D UP12_03080 glutamate:protein symporter K11102 gltP; proton glutamate symport protein
D UP12_05180 glutamate:protein symporter K11102 gltP; proton glutamate symport protein
D UP12_15760 glutamate:protein symporter K11102 gltP; proton glutamate symport protein
D UP12_02450 glutamate:protein symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D UP12_18195 antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D UP12_15695 sodium:proton symporter K24163 nhaK; monovalent cation/hydrogen antiporter
D UP12_05020 K(+)/H(+) antiporter subunit KhtT K07228 khtT; K+:H+ antiporter subunit KhtT
D UP12_12100 hypothetical protein K07228 khtT; K+:H+ antiporter subunit KhtT
D UP12_05015 potassium transporter K26732 khtU; K+:H+ antiporter subunit KhtU
D UP12_05025 k+ h+ antiporter for k+ efflux K26733 khtS; K+:H+ antiporter modulator KhtS
D UP12_06525 Ktr system potassium uptake protein D K03498 trkH; trk/ktr system potassium uptake protein
D UP12_07020 potassium transporter Trk K03499 trkA; trk/ktr system potassium uptake protein
D UP12_07535 uracil permease K02824 uraA; uracil permease
D UP12_09915 xanthine permease K16169 pbuX; xanthine permease
D UP12_13540 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D UP12_03315 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D UP12_18370 pyrimidine nucleoside transporter NupC K11535 nupC; nucleoside transport protein
D UP12_16940 transporter K07240 chrA; chromate transporter
D UP12_16945 transporter K07240 chrA; chromate transporter
D UP12_00985 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D UP12_16165 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D UP12_02420 manganese transport protein MntH K03322 mntH; manganese transport protein
D UP12_02435 C4-dicarboxylate ABC transporter K11688 dctP; C4-dicarboxylate-binding protein DctP
D UP12_17560 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D UP12_11535 hypothetical protein K03324 yjbB; phosphate:Na+ symporter
D UP12_08830 arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D UP12_01915 arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D UP12_14920 cation:proton antiporter K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D UP12_14925 monovalent cation/H+ antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D UP12_14930 monovalent cation/H+ antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D UP12_14935 monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D UP12_14940 monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D UP12_14945 monovalent cation/H+ antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D UP12_14950 cation:proton antiporter K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D UP12_16660 Teichuronic acid biosynthesis protein TuaB K16694 tuaB; teichuronic acid exporter
D UP12_12115 stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D UP12_06670 multidrug transporter MatE K06409 spoVB; stage V sporulation protein B
D UP12_16015 membrane protein K19418 epsK; membrane protein EpsK
D UP12_17285 transporter K13936 mdcF; malonate transporter and related proteins
D UP12_04770 membrane protein K24180 mleP; malate permease and related proteins
D UP12_13305 LysE family L-lysine exporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D UP12_12180 lysine transporter LysE K06895 lysE; L-lysine exporter family protein LysE/ArgO
D UP12_03030 amino acid transporter LysE K11249 eamB; cysteine/O-acetylserine efflux protein
D UP12_03065 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D UP12_03060 branched-chain amino acid transporter AzlD K26606 azlD; branched chain amino acid efflux pump
D UP12_10370 riboflavin transporter FmnP K23675 fmnP; riboflavin transporter
D UP12_14055 thiamine biosynthesis protein ThiT K16789 thiT; thiamine transporter
D UP12_09870 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D UP12_15870 membrane protein K05595 marC; multiple antibiotic resistance protein
D UP12_07185 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D UP12_07375 stage V sporulation protein E K03588 ftsW; cell division protein FtsW
D UP12_14080 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D UP12_06340 DNA-binding protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D UP12_17245 membrane protein K23242 mntP; manganese efflux pump family protein
D UP12_08720 cytochrome C biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D UP12_06950 efflux permease K24950 yknX; membrane fusion protein, antimicrobial resistance system
D UP12_16055 tyrosine protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D UP12_16060 capsular biosynthesis protein K19420 epsA; protein tyrosine kinase modulator
D UP12_13930 membrane protein K05770 TSPO; translocator protein
D UP12_03565 methyltransferase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D UP12_06945 antimicrobial peptide abc transporter permease K24951 yknW; membrane protein, antimicrobial resistance system
D UP12_16030 membrane protein K19419 epsG; transmembrane protein EpsG
D UP12_02195 copper-binding protein K14166 ycnJ; copper transport protein
C 02044 Secretion system [BR:bpus02044]
D UP12_02750 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D UP12_07495 membrane protein K02221 yggT; YggT family protein
D UP12_11625 competence protein ComEA K02237 comEA; competence protein ComEA
D UP12_11620 competence protein ComE K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D UP12_11615 competence protein ComEC K02238 comEC; competence protein ComEC
D UP12_11630 competence protein K02239 comER; competence protein ComER
D UP12_16590 competence protein ComF K02240 comFA; competence protein ComFA
D UP12_16585 competence protein ComF K02241 comFB; competence protein ComFB
D UP12_16580 hypothetical protein K02242 comFC; competence protein ComFC
D UP12_11190 competence protein ComG K02243 comGA; competence protein ComGA
D UP12_11185 competence protein ComGB K02244 comGB; competence protein ComGB
D UP12_11180 competence protein ComG K02245 comGC; competence protein ComGC
D UP12_11175 competence protein ComGD K02246 comGD; competence protein ComGD
D UP12_11170 competence protein ComGE K02247 comGE; competence protein ComGE
D UP12_11165 competence protein ComGF K02248 comGF; competence protein ComGF
D UP12_11160 hypothetical protein K02249 comGG; competence protein ComGG
D UP12_12305 peptidase A24 K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D UP12_05240 competence protein K02250 comK; competence protein ComK
D UP12_14970 quorum-sensing protein K02251 comQ; competence protein ComQ
D UP12_05630 competence protein ComG K02254 comZ; competence protein ComZ
D UP12_07990 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D UP12_07985 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D UP12_07830 hypothetical protein K04061 flhB2; flagellar biosynthesis protein
D UP12_07895 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D UP12_07905 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D UP12_07910 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D UP12_07955 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D UP12_07965 flagella biosynthesis protein FliZ K02418 fliO; flagellar protein FliO/FliZ
D UP12_07970 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP
D UP12_07975 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D UP12_07980 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D UP12_19315 conjugal transfer protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D UP12_16500 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D UP12_12105 preprotein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D UP12_00645 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D UP12_15815 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D UP12_00825 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D UP12_07780 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D UP12_07770 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D UP12_12130 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D UP12_19175 OxaA-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UP12_10815 OxaA-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D UP12_03160 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D UP12_03165 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:bpus02042]
D UP12_14760 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D UP12_04895 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D UP12_04885 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D UP12_09770 hemolysin D K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:bpus02022]
D UP12_13065 alkaline phosphatase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D UP12_13070 chemotaxis protein CheY K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D UP12_15505 histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D UP12_15500 transcriptional regulator K07770 cssR; two-component system, OmpR family, response regulator CssR
D UP12_10395 histidine kinase K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D UP12_10400 transcriptional regulator K07775 resD; two-component system, OmpR family, response regulator ResD
D UP12_18890 histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D UP12_18895 PhoP family transcriptional regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D UP12_08975 transcriptional regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D UP12_13265 histidine kinase K11629 bceS; two-component system, OmpR family, bacitracin resistance sensor histidine kinase BceS [EC:2.7.13.3]
D UP12_13260 PhoB family transcriptional regulator K11630 bceR; two-component system, OmpR family, bacitracin resistance response regulator BceR
D UP12_06430 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D UP12_06425 PhoB family transcriptional regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D UP12_16415 transcriptional regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D UP12_15330 DeoR faimly transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D UP12_18760 heme transporter CcmC K02483 K02483; two-component system, OmpR family, response regulator
D UP12_14965 histidine kinase K07680 comP; two-component system, NarL family, sensor histidine kinase ComP [EC:2.7.13.3]
D UP12_14960 transcriptional regulator K07691 comA; two-component system, NarL family, competent response regulator ComA
D UP12_16605 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D UP12_16600 chemotaxis protein CheY K07692 degU; two-component system, NarL family, response regulator DegU
D UP12_13245 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D UP12_13250 transcriptional regulatory protein DesR K07693 desR; two-component system, NarL family, response regulator DesR
D UP12_15545 histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D UP12_15540 LuxR family transcriptional regulator K11618 liaR; two-component system, NarL family, response regulator LiaR
D UP12_02960 histidine kinase K11623 ydfH; two-component system, NarL family, sensor histidine kinase YdfH [EC:2.7.13.3]
D UP12_02965 chemotaxis protein CheY K11624 ydfI; two-component system, NarL family, response regulator YdfI
D UP12_04810 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D UP12_06750 sporulation kinase K02491 kinA; two-component system, sporulation sensor kinase A [EC:2.7.13.3]
D UP12_14840 sporulation kinase K07697 kinB; two-component system, sporulation sensor kinase B [EC:2.7.13.3]
D UP12_07010 sporulation kinase K07698 kinC; two-component system, sporulation sensor kinase C [EC:2.7.13.3]
D UP12_06595 sporulation kinase K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D UP12_06545 sporulation kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D UP12_17330 chemotaxis protein CheY K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D UP12_10940 chemotaxis protein CheY K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D UP12_03860 histidine kinase K11637 citS; two-component system, CitB family, sensor histidine kinase CitS [EC:2.7.13.3]
D UP12_03865 transcriptional regulator K11638 K11638; two-component system, CitB family, response regulator CitT
D UP12_02440 histidine kinase K11691 K11691; two-component system, CitB family, sensor histidine kinase DctS [EC:2.7.13.3]
D UP12_02445 chemotaxis protein CheY K11692 K11692; two-component system, CitB family, response regulator DctR
D UP12_14880 histidine kinase K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D UP12_14885 transcriptional regulator K11615 malR; two-component system, CitB family, response regulator MalR
D UP12_12985 histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D UP12_12980 two-component response regulator K07705 lytT; two-component system, LytTR family, response regulator LytT
D UP12_01580 histidine kinase K11640 natK; two-component system, LytTR family, sensor histidine kinase NatK [EC:2.7.13.3]
D UP12_01585 LuxR family transcriptional regulator K11641 natR; two-component system, LytTR family, response regulator NatR
D UP12_08010 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D UP12_07960 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D UP12_08005 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D UP12_04730 histidine kinase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D UP12_06775 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D UP12_01555 histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D UP12_15750 histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D UP12_01560 transcriptional regulator K07719 glnL; two-component system, response regulator GlnL
D UP12_15745 transcriptional regulator K07719 glnL; two-component system, response regulator GlnL
D UP12_16775 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D UP12_16770 response regulator K07720 yesN; two-component system, response regulator YesN
C 02035 Bacterial motility proteins [BR:bpus02035]
D UP12_08010 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D UP12_08015 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D UP12_10820 chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D UP12_08020 chemotaxis protein CheY K03410 cheC; chemotaxis protein CheC
D UP12_08025 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D UP12_10200 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D UP12_08005 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D UP12_04730 histidine kinase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D UP12_07960 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D UP12_06775 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D UP12_03945 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_14720 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_14725 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_14730 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_14735 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_01955 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_02215 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_06725 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_16510 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D UP12_05220 chemotaxis protein K06595 hemAT; heam-based aerotactic trancducer
D UP12_07905 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D UP12_07910 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D UP12_07915 fliJ; flagellar biosynthesis chaperone K02413 fliJ; flagellar protein FliJ
D UP12_07965 flagella biosynthesis protein FliZ K02418 fliO; flagellar protein FliO/FliZ
D UP12_07970 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP
D UP12_07975 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D UP12_07980 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D UP12_07990 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D UP12_07985 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D UP12_07900 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D UP12_07950 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D UP12_07955 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D UP12_07895 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D UP12_07945 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D UP12_07890 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D UP12_07925 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D UP12_07880 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D UP12_07885 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D UP12_07930 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D UP12_17005 flagellar basal body rod protein FlgC K02391 flgF; flagellar basal-body rod protein FlgF
D UP12_17000 flagellar hook-basal body protein FlhP K02392 flgG; flagellar basal-body rod protein FlgG
D UP12_07935 flgG; flagellar basal body rod protein FlgG K02390 flgE; flagellar hook protein FlgE
D UP12_16560 flagellar hook protein FlgK K02396 flgK; flagellar hook-associated protein 1
D UP12_16555 flagellar hook protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D UP12_05960 flagellin K02406 fliC; flagellin
D UP12_06110 flagellin K02406 fliC; flagellin
D UP12_06115 flagellin K02406 fliC; flagellin
D UP12_06120 flagellin K02406 fliC; flagellin
D UP12_06125 flagellin K02406 fliC; flagellin
D UP12_16530 fliD; flagellar capping protein K02407 fliD; flagellar hook-associated protein 2
D UP12_16525 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D UP12_16520 flagellar assembly protein FliT K02423 fliT; flagellar protein FliT
D UP12_08030 RNA polymerase sigma factor SigD K02405 fliA; RNA polymerase sigma factor FliA
D UP12_06610 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D UP12_06605 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D UP12_01925 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D UP12_02080 L-cystine-binding protein TcyA K02424 tcyA; L-cystine transport system substrate-binding protein
D UP12_16545 flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D UP12_16570 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D UP12_16535 flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D UP12_07940 hypothetical protein K02385 flbD; flagellar protein FlbD
D UP12_07995 flagellar biosynthesis regulator FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D UP12_08000 flagellum site-determining protein YlxH K04562 flhG; flagellar biosynthesis protein FlhG
D UP12_02750 type II/IV secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:bpus04812]
D UP12_07000 rod-share determining protein MreBH K03569 mreB; rod shape-determining protein MreB and related proteins
D UP12_17010 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D UP12_12285 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D UP12_19675 hypothetical protein K18640 parM; plasmid segregation protein ParM
D UP12_07415 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D UP12_07410 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D UP12_12270 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC
D UP12_12265 cell division inhibitor MinD K03609 minD; septum site-determining protein MinD
D UP12_19140 sporulation initiation inhibitor Soj K03496 parA; chromosome partitioning protein
D UP12_19135 plasmid partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D UP12_19150 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:bpus04147]
D UP12_15910 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D UP12_15930 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D UP12_15925 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D UP12_13105 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D UP12_06890 thioredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D UP12_14085 membrane protein K07192 FLOT; flotillin
D UP12_03190 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D UP12_11560 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D UP12_14790 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D UP12_00070 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D UP12_00710 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D UP12_05110 protein hit K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D UP12_01715 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D UP12_12875 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D UP12_05195 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D UP12_11955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_17395 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D UP12_00830 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D UP12_12085 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D UP12_13180 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D UP12_13185 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D UP12_17835 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D UP12_04795 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D UP12_08500 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D UP12_12340 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D UP12_04855 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D UP12_10375 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D UP12_03385 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D UP12_07075 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_02615 acoL; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_06230 acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_10895 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D UP12_12855 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D UP12_10755 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D UP12_15920 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D UP12_04565 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:bpus02048]
D UP12_15365 DEAD/DEAH box helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D UP12_15355 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D UP12_15350 type I restriction-modification protein subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D UP12_13200 hypothetical protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D UP12_19520 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D UP12_12740 DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D UP12_12665 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D UP12_05335 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D UP12_19340 hypothetical protein K07448 mrr; restriction system protein
D UP12_18710 restriction endonuclease K07448 mrr; restriction system protein
D UP12_02545 PemK family transcriptional regulator K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D UP12_02540 antitoxin endoai K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D UP12_16355 membrane protein K03973 pspC; phage shock protein C
D UP12_03625 transposase K21493 yxiD; toxin YxiD [EC:3.1.-.-]
D UP12_17540 transposase K21493 yxiD; toxin YxiD [EC:3.1.-.-]
D UP12_07415 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D UP12_07000 rod-share determining protein MreBH K03569 mreB; rod shape-determining protein MreB and related proteins
D UP12_17010 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D UP12_12285 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D UP12_08805 DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D UP12_08800 gyrB; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D UP12_13325 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UP12_12040 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D UP12_12210 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:bpus01504]
D UP12_01945 aminoglycoside phosphotransferase K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]
D UP12_16095 ABC transporter K19349 vga; pleuromutilin/lincosamide/streptogramin A transport system ATP-binding/permease protein
D UP12_05605 MFS transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D UP12_11235 MFS transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D UP12_09255 acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D UP12_06020 macrolide 2'-phosphotransferase K06979 mph; macrolide phosphotransferase
D UP12_05990 chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D UP12_08940 pentapeptide repeat protein K18555 qnr; fluoroquinolone resistance protein
D UP12_09630 peptidase M15 K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D UP12_12465 alanine-phosphoribitol ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D UP12_12460 alanine transporter K03739 dltB; membrane protein involved in D-alanine export
D UP12_12455 alanine-phosphoribitol ligase K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D UP12_12450 alanine transporter K03740 dltD; D-alanine transfer protein
D UP12_04255 phosphatidylglycerol lysyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:bpus00536]
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:bpus00537]
D UP12_04855 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:bpus03100]
D UP12_00050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UP12_14500 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UP12_00545 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UP12_13995 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UP12_00170 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D UP12_00535 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UP12_16140 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UP12_12505 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UP12_03085 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UP12_14005 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D UP12_00975 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D UP12_04465 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D UP12_02625 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D UP12_13945 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D UP12_03115 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D UP12_18905 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D UP12_13970 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D UP12_04490 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D UP12_04530 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D UP12_01045 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D UP12_02640 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D UP12_11205 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D UP12_04520 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D UP12_01025 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UP12_00390 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UP12_04475 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UP12_18910 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UP12_02635 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UP12_13935 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D UP12_13955 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UP12_04525 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UP12_03090 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UP12_14015 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UP12_04635 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UP12_00525 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D UP12_04515 tRNA-His K14226 tRNA-His; tRNA His
D UP12_13960 tRNA-His K14226 tRNA-His; tRNA His
D UP12_00045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D UP12_00165 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D UP12_13950 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D UP12_02655 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UP12_00520 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UP12_00530 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UP12_04535 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UP12_04540 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UP12_02650 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UP12_14010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UP12_14020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D UP12_00515 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D UP12_02645 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D UP12_14025 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D UP12_18915 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D UP12_00385 tRNA-Met K14230 tRNA-Met; tRNA Met
D UP12_03110 tRNA-Met K14230 tRNA-Met; tRNA Met
D UP12_13985 tRNA-Met K14230 tRNA-Met; tRNA Met
D UP12_04485 tRNA-Met K14230 tRNA-Met; tRNA Met
D UP12_13975 tRNA-Met K14230 tRNA-Met; tRNA Met
D UP12_13990 tRNA-Met K14230 tRNA-Met; tRNA Met
D UP12_04495 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D UP12_13965 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D UP12_18900 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D UP12_00540 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D UP12_14000 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D UP12_00105 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UP12_02630 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UP12_13980 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UP12_04470 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UP12_13940 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D UP12_00980 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D UP12_00510 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D UP12_04500 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D UP12_14030 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D UP12_01035 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D UP12_04510 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D UP12_01040 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D UP12_04505 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D UP12_00505 tRNA-Val K14237 tRNA-Val; tRNA Val
D UP12_05935 tRNA-Val K14237 tRNA-Val; tRNA Val
D UP12_01030 tRNA-Val K14237 tRNA-Val; tRNA Val
D UP12_04480 tRNA-Val K14237 tRNA-Val; tRNA Val
D UP12_14035 tRNA-Val K14237 tRNA-Val; tRNA Val
D UP12_03095 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_00040 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_00550 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_00960 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_14050 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_00160 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_00490 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_04450 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D UP12_00555 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_00175 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_04455 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_00055 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_00495 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_00965 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_03100 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_14045 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D UP12_04460 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_00060 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_00180 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_00500 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_00560 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_00970 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_03105 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_14040 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D UP12_19185 bacterial RNase P K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D UP12_15040 short-chain dehydrogenase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D UP12_01575 oxidoreductase K06607 iolS; myo-inositol catabolism protein IolS [EC:1.1.1.-]
D UP12_01355 alcohol dehydrogenase K08317 hcxA; hydroxycarboxylate dehydrogenase A [EC:1.1.1.-]
D UP12_14795 butanol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D UP12_14800 butanol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D UP12_02600 acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D UP12_06215 pyruvate dehydrogenase K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D UP12_02605 pyruvate dehydrogenase K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D UP12_06220 pyruvate dehydrogenase K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D UP12_05555 FAD-binding protein K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D UP12_17385 acyl-CoA dehydrogenase K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-]
D UP12_04235 NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D UP12_03815 alcohol dehydrogenase K00359 qorA; NADPH:quinone reductase [EC:1.6.5.5]
D UP12_10735 NADPH dehydrogenase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D UP12_08850 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D UP12_02280 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D UP12_15345 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D UP12_10320 hypothetical protein K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D UP12_09710 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D UP12_09705 peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D UP12_11835 manganese catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D UP12_06820 manganese catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D UP12_04430 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D UP12_13205 peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D UP12_06405 Organic hydroperoxide resistance protein OhrA K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D UP12_06395 Organic hydroperoxide resistance protein OhrA K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D UP12_01510 dioxygenase K07155 qodI; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D UP12_04845 nitric oxide dioxygenase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D UP12_05470 lysine 6-monooxygenase K27501 alcA; putrescine N-hydroxylase [EC:1.14.13.252]
D UP12_05010 ornithine monooxygenase K27501 alcA; putrescine N-hydroxylase [EC:1.14.13.252]
D UP12_02100 nitrilotriacetate monooxygenase K24116 scmK; N-acetyl-S-(2-succino)cysteine monooxygenase [EC:1.14.-.-]
D UP12_03240 copper oxidase K06324 cotA; spore coat protein A, manganese oxidase [EC:1.16.3.3]
D UP12_04195 thioredoxin reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D UP12_15125 ferredoxin-NADP reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D UP12_08825 arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D UP12_03010 NAD(P)H nitroreductase K15976 K15976; putative NAD(P)H nitroreductase [EC:1.-.-.-]
D UP12_09940 RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D UP12_03200 GNAT family acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D UP12_16200 acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D UP12_03400 beta-lysine acetyltransferase K21935 ablB; beta-lysine N6-acetyltransferase [EC:2.3.1.264]
D UP12_02975 GNAT family acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D UP12_16785 acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D UP12_13400 acetoin dehydrogenase K04766 acuA; acetoin utilization protein AcuA [EC:2.3.1.-]
D UP12_16005 acetyltransferase K19429 epsM; acetyltransferase EpsM [EC:2.3.1.-]
D UP12_02105 acetyltransferase K24117 scmL; S-(2-succino)cysteine N-acetyltransferase [EC:2.3.1.-]
D UP12_14740 transglutaminase K00686 tgl; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D UP12_10070 N-acetyl-alpha-D-glucosaminyl L-malate synthase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D UP12_16045 glycosyl transferase K19422 epsD; glycosyltransferase EpsD [EC:2.4.-.-]
D UP12_16320 diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D UP12_18135 fosfomycin resistance protein FosB K11210 fosB; metallothiol transferase [EC:2.5.1.-]
D UP12_16000 pyridoxal phosphate-dependent aminotransferase K19430 epsN; pyridoxal phosphate-dependent aminotransferase EpsN [EC:2.6.1.-]
D UP12_11365 transcriptional regulator K18673 bglK; beta-glucoside kinase [EC:2.7.1.85]
D UP12_03555 hypothetical protein K23983 amiN; amicoumacin kinase [EC:2.7.1.230]
D UP12_09075 1-phosphofructokinase K25602 tagK; D-tagatose-1-phosphate kinase [EC:2.7.1.234]
D UP12_07715 hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D UP12_11445 phosphotransferase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D UP12_04700 hypothetical protein K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D UP12_00590 DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D UP12_01065 membrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D UP12_09555 hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D UP12_10555 anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D UP12_16325 serine kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D UP12_00575 ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D UP12_16020 pyruvyl transferase K19426 epsI; pyruvyl transferase EpsI [EC:2.-.-.-]
D UP12_15810 carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D UP12_11680 hypothetical protein K23978 IAH1; isoamyl acetate esterase [EC:3.1.1.112]
D UP12_08770 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D UP12_12810 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D UP12_00395 stage II sporulation protein E K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D UP12_09165 protein tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D UP12_03560 alkaline phosphatase K23984 amiO; amicoumacin phosphatase [EC:3.1.3.107]
D UP12_11670 hypothetical protein K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D UP12_19030 hypothetical protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D UP12_11490 membrane protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D UP12_00260 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D UP12_00270 ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D UP12_17940 aspartate phosphatase K06362 rapD; response regulator aspartate phosphatase D [EC:3.1.-.-]
D UP12_16995 aspartate phosphatase K06362 rapD; response regulator aspartate phosphatase D [EC:3.1.-.-]
D UP12_02810 aspartate phosphatase K06367 rapI; response regulator aspartate phosphatase I [EC:3.1.-.-]
D UP12_19585 hypothetical protein K06368 rapJ; response regulator aspartate phosphatase J [EC:3.1.-.-]
D UP12_08390 response regulator K06368 rapJ; response regulator aspartate phosphatase J [EC:3.1.-.-]
D UP12_09355 1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D UP12_08100 glycoside hydrolase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D UP12_02870 beta-glucanase K01216 bglS; licheninase [EC:3.2.1.73]
D UP12_18530 galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D UP12_08980 glucuronoxylanase K15924 xynC; glucuronoarabinoxylan endo-1,4-beta-xylanase [EC:3.2.1.136]
D UP12_13605 glycosyl hydrolase family 88 K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D UP12_00120 spore gernimation protein K06306 sleL; cortical fragment-lytic enzyme [EC:3.2.1.-]
D UP12_01415 alpha-mannosidase K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-]
D UP12_06155 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D UP12_14135 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D UP12_14510 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D UP12_07045 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D UP12_07655 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D UP12_11720 hypothetical protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D UP12_11685 chitooligosaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D UP12_16090 hypothetical protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D UP12_08165 hypothetical protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D UP12_04930 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D UP12_09910 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D UP12_00955 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D UP12_10075 deacetylase K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D UP12_04055 polysaccharide deacetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D UP12_09565 deacetylase K22135 bshB2; N-acetylglucosamine malate deacetylase 2 [EC:3.5.1.-]
D UP12_00305 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D UP12_08885 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D UP12_03255 ATPase AAA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D UP12_17240 protein tyrosine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D UP12_17410 uvsE; UV damage repair endonuclease UvdE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-]
D UP12_03885 PadR family transcriptional regulator K13727 pdc; phenolic acid decarboxylase [EC:4.1.1.-]
D UP12_06720 radical SAM protein K03716 splB; spore photoproduct lyase [EC:4.1.99.14]
D UP12_09510 squalene-hopene cyclase K18115 sqhC; sporulenol synthase [EC:4.2.1.137]
D UP12_13720 tetraprenyl-beta-curcumene synthase K16188 ytpB; tetraprenyl-beta-curcumene synthase [EC:4.2.3.130]
D UP12_16865 capsule biosynthesis protein CapB K01932 capB; gamma-polyglutamate synthase [EC:6.3.2.-]
D UP12_07620 ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D UP12_06680 ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D UP12_15715 cadmium transporter K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D UP12_16205 phosphocarrier protein Chr K11184 chr; catabolite repression HPr-like protein
D UP12_13405 acetoin utilization protein AcuB K04767 acuB; acetoin utilization protein AcuB
D UP12_13410 histone deacetylase K04768 acuC; acetoin utilization protein AcuC
D UP12_08610 Fe-S oxidoreductase K18928 lldE; L-lactate dehydrogenase complex protein LldE
D UP12_08615 amino acid dehydrogenase K18929 lldF; L-lactate dehydrogenase complex protein LldF
D UP12_08620 lactate utilization protein C K00782 lldG; L-lactate dehydrogenase complex protein LldG
D UP12_10665 Expansin-YoaJ K20628 exlX; expansin
D UP12_07330 hypothetical protein K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D UP12_17125 formate dehydrogenase K02379 fdhD; FdhD protein
D UP12_10365 ferredoxin K05337 fer; ferredoxin
D UP12_11425 cytochrome C' K13300 cccA; cytochrome c550
D UP12_16475 cytochrome C' K12263 cccB; cytochrome c551
D UP12_15380 nitrogen fixation protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
D UP12_09540 hypothetical protein K04748 norQ; nitric oxide reductase NorQ protein
D UP12_06855 flavodoxin K03839 fldA; flavodoxin I
D UP12_06865 flavodoxin K03839 fldA; flavodoxin I
D UP12_12860 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D UP12_09750 DegV domain-containing protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D UP12_16595 DegV domain-containing protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D UP12_05515 DegV domain-containing protein YitS K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D UP12_08455 ribonucleotide reductase K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D UP12_07485 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D UP12_16050 polysaccharide biosynthesis protein EpsC K19421 epsC; polysaccharide biosynthesis protein EpsC
D UP12_16640 Teichuronic acid biosynthesis protein TuaE K16705 tuaE; teichuronic acid biosynthesis protein TuaE
D UP12_16635 Teichuronic acid biosynthesis protein TuaF K16706 tuaF; teichuronic acid biosynthesis protein TuaF
D UP12_01610 cell wall hydrolase K01449 cwlJ; cell wall hydrolase
D UP12_06665 peptigoglycan-binding protein LysM K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D UP12_10460 reductase K02859 ribT; riboflavin biosynthesis RibT protein
D UP12_06925 molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
D UP12_19075 ring-cleaving dioxygenase K15975 K15975; glyoxalase family protein
D UP12_06260 ring-cleaving dioxygenase K15975 K15975; glyoxalase family protein
D UP12_05305 oxidoreductase K15977 K15977; putative oxidoreductase
D UP12_19070 carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D UP12_09805 hypothetical protein K26958 brxA_B; bacilliredoxin
D UP12_10865 hypothetical protein K26958 brxA_B; bacilliredoxin
D UP12_13425 hypothetical protein K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D UP12_05265 barnase inhibitor K03623 yhcO; ribonuclease inhibitor
D UP12_04695 cold-shock protein K03704 cspA; cold shock protein
D UP12_02850 cold-shock protein K03704 cspA; cold shock protein
D UP12_09850 cold-shock protein K03704 cspA; cold shock protein
D UP12_05725 ArsR family transcriptional regulator K16509 spxA; regulatory protein spx
D UP12_11210 regulatory protein MgsR K16509 spxA; regulatory protein spx
D UP12_17855 antirepressor K19432 slrA; anti-repressor of SlrR
D UP12_02590 hypothetical protein K06959 tex; protein Tex
D UP12_07630 hypothetical protein K09777 remA; extracellular matrix regulatory protein A
D UP12_00025 hypothetical protein K24648 remB; extracellular matrix regulatory protein B
C 99974 Translation
D UP12_14810 general stress protein K07570 GSP13; general stress protein 13
D UP12_00380 hypothetical protein K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D UP12_00570 hypothetical protein K19411 mcsA; protein arginine kinase activator
D UP12_12390 tig; trigger factor K03545 tig; trigger factor
D UP12_15800 single-stranded DNA-binding protein K03664 smpB; SsrA-binding protein
D UP12_16290 thioredoxin K07396 K07396; putative protein-disulfide isomerase
D UP12_08925 dithiol-disulfide isomerase K07396 K07396; putative protein-disulfide isomerase
D UP12_10410 cytochrome C biogenesis protein K07399 resB; cytochrome c biogenesis protein
D UP12_11520 membrane protein K07403 nfeD; membrane-bound serine protease (ClpP class)
D UP12_05735 adapter protein MecA K16511 mecA1_2; adapter protein MecA 1/2
D UP12_10330 adaptor protein K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D UP12_12290 hypothetical protein K03630 radC; DNA repair protein RadC
D UP12_00240 hypothetical protein K07461 K07461; putative endonuclease
D UP12_07845 DNA repair protein Smf K04096 smf; DNA processing protein
D UP12_10025 DNA replication protein DnaD K02086 dnaD; DNA replication protein
D UP12_02705 DNA polymerase K07467 nicK; putative DNA relaxase
D UP12_14280 terminase K06909 xtmB; phage terminase large subunit
D UP12_14640 terminase K06909 xtmB; phage terminase large subunit
D UP12_15430 TOPRIM domain-containing protein K07476 yusF; toprim domain protein
D UP12_12050 recombinase RarA K07478 ycaJ; putative ATPase
D UP12_14495 integrase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D UP12_00140 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D UP12_09380 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D UP12_01220 D-alanine/D-serine/glycine permease K03293 TC.AAT; amino acid transporter, AAT family
D UP12_16425 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D UP12_18450 GABA permease (4-amino butyrate transport carrier) K03293 TC.AAT; amino acid transporter, AAT family
D UP12_01530 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D UP12_06255 serine/threonine protein kinase K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D UP12_03780 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D UP12_03595 Swarming motility protein SwrC K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D UP12_12790 damage-inducible protein CinA K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D UP12_18540 citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D UP12_02090 peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D UP12_06170 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D UP12_03570 proline:sodium symporter PutP K03307 TC.SSS; solute:Na+ symporter, SSS family
D UP12_09610 symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D UP12_11860 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D UP12_03990 transporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D UP12_13330 branched-chain amino acid transporter K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D UP12_13335 branched-chain amino acid transporter K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D UP12_09520 sodium transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D UP12_00990 hypothetical protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D UP12_00350 membrane protein K03328 TC.PST; polysaccharide transporter, PST family
C 99978 Cell growth
D UP12_00155 sigma-K factor-processing regulatory protein BofA K06317 bofA; inhibitor of the pro-sigma K processing machinery
D UP12_12160 BofC K06318 bofC; forespore regulator of the sigma-K checkpoint
D UP12_09685 CgeA K06319 cgeA; spore maturation protein CgeA
D UP12_09690 spore maturation protein K06320 cgeB; spore maturation protein CgeB
D UP12_09680 spore maturation protein K06321 cgeC; spore maturation protein CgeC
D UP12_09675 spore maturation protein K06322 cgeD; spore maturation protein CgeD
D UP12_11735 hypothetical protein K06327 cotD; spore coat protein D
D UP12_08350 spore coat protein K06328 cotE; spore coat protein E
D UP12_05375 spore coat protein K06330 cotH; spore coat protein H
D UP12_08735 spore coat protein K06335 cotM; spore coat protein M
D UP12_05875 spore coat protein K06340 cotV; spore coat protein V
D UP12_05870 spore coat protein K06341 cotW; spore coat protein W
D UP12_05865 spore coat protein K06342 cotX; spore coat protein X
D UP12_05860 spore coat protein K06343 cotY_Z; CotY/CotZ family spore coat protein
D UP12_05855 spore coat protein K06343 cotY_Z; CotY/CotZ family spore coat protein
D UP12_12185 spore cortex protein K06345 coxA; spore cortex protein
D UP12_19170 protein jag K06346 jag; spoIIIJ-associated protein
D UP12_14855 3'-5' exonuclease K06348 kapD; sporulation inhibitor KapD
D UP12_00950 KinB-signaling pathway activation protein K06349 kbaA; KinB signaling pathway activation protein
D UP12_02270 KipI antagonist K06350 kipA; antagonist of KipI
D UP12_02265 kinase inhibitor K06351 kipI; inhibitor of KinA
D UP12_12190 SpoVID-associated morphogenetic protein K06370 safA; morphogenetic protein associated with SpoVID
D UP12_11675 sporulation protein K06371 sda; developmental checkpoint coupling sporulation initiation to replication initiation
D UP12_10430 spore maturation protein K06373 spmA; spore maturation protein A
D UP12_10425 spore maturation protein K06374 spmB; spore maturation protein B
D UP12_06590 transcriptional regulator K06376 spo0E; stage 0 sporulation regulatory protein
D UP12_15090 sporulation protein K06377 spo0M; sporulation-control protein
D UP12_10560 anti-sigma F factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D UP12_12300 stage II sporulation protein B K06380 spoIIB; stage II sporulation protein B
D UP12_10595 stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M
D UP12_11590 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D UP12_17065 peptidase M23 K06386 spoIIQ; stage II sporulation protein Q
D UP12_17260 stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D UP12_06165 stage II sporulation protein SA K06388 spoIISA; stage II sporulation protein SA
D UP12_06160 stage II sporulation protein SB K06389 spoIISB; stage II sporulation protein SB
D UP12_11045 stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA
D UP12_11040 stage III sporulation protein SpoAB K06391 spoIIIAB; stage III sporulation protein AB
D UP12_11035 stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D UP12_11030 stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD
D UP12_11025 stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE
D UP12_11020 stage III sporulation protein AF K06395 spoIIIAF; stage III sporulation protein AF
D UP12_11015 stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG
D UP12_11010 stage III sporulation protein AH K06397 spoIIIAH; stage III sporulation protein AH
D UP12_10240 stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D UP12_12540 serine recombinase K06400 spoIVCA; site-specific DNA recombinase
D UP12_12260 stage IV sporulation protein FA K06401 spoIVFA; stage IV sporulation protein FA
D UP12_10545 stage V sporulation protein AA K06403 spoVAA; stage V sporulation protein AA
D UP12_10540 stage V sporulation protein AB K06404 spoVAB; stage V sporulation protein AB
D UP12_10535 stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D UP12_10530 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D UP12_10520 stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D UP12_10525 stage V sporulation protein AEB K06407 spoVAE; stage V sporulation protein AE
D UP12_10515 stage V sporulation protein AF K06408 spoVAF; stage V sporulation protein AF
D UP12_08185 dipicolinate synthase subunit A K06410 spoVFA; dipicolinate synthase subunit A
D UP12_08190 spoVFB; dipicolinate synthase subunit B K06411 spoVFB; dipicolinate synthase subunit B
D UP12_00310 septation protein spoVG K06412 spoVG; stage V sporulation protein G
D UP12_08480 stage V sporulation protein K K06413 spoVK; stage V sporulation protein K
D UP12_07700 spoVM; stage V sporulation protein M K06414 spoVM; stage V sporulation protein M
D UP12_04850 stage V sporulation protein R K06415 spoVR; stage V sporulation protein R
D UP12_08315 stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D UP12_12330 spore coat protein K06417 spoVID; stage VI sporulation protein D
D UP12_17660 spore coat protein K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF
D UP12_13315 spore protein K06418 SASP-A; small acid-soluble spore protein A (major alpha-type SASP)
D UP12_04960 spore protein K06419 SASP-B; small acid-soluble spore protein B (major beta-type SASP)
D UP12_06510 spore protein K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D UP12_04375 spore protein K06422 sspE; small acid-soluble spore protein E (minor gamma-type SASP)
D UP12_00290 protein sspF K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP)
D UP12_12930 small acid-soluble spore protein SspI K06426 sspI; small acid-soluble spore protein I (minor)
D UP12_15655 spore protein K06427 sspJ; small acid-soluble spore protein J (minor)
D UP12_04305 spore protein K K06428 sspK; small acid-soluble spore protein K (minor)
D UP12_09880 spore protein K06429 sspL; small acid-soluble spore protein L (minor)
D UP12_09995 spore protein K06430 sspM; small acid-soluble spore protein M (minor)
D UP12_08760 spore protein N K06431 sspN; small acid-soluble spore protein N (minor)
D UP12_08745 small, acid-soluble spore protein O K06432 sspO; small acid-soluble spore protein O (minor)
D UP12_08740 small, acid-soluble spore protein P K06433 sspP; small acid-soluble spore protein P (minor)
D UP12_08765 small acid-soluble spore protein Tlp K06434 tlp; small acid-soluble spore protein (thioredoxin-like protein)
D UP12_00280 peptidase K06436 yabG; spore coat assemly protein
D UP12_06905 sigmaE regulated sporulation protein K06437 yknT; sigma-E controlled sporulation protein
D UP12_11500 stage IV sporulation protein K06438 yqfD; similar to stage IV sporulation protein
D UP12_15520 spore gernimation protein K06288 gerAA; spore germination protein AA
D UP12_15530 spore gernimation protein K06290 gerAC; spore germination protein AC
D UP12_16815 spore gernimation protein K06291 gerBA; spore germination protein BA
D UP12_16825 spore gernimation protein GerA K06293 gerBC; spore germination protein BC
D UP12_00945 spore gernimation protein GerD K06294 gerD; spore germination protein D
D UP12_16870 spore gernimation protein GerK K06295 gerKA; spore germination protein KA
D UP12_09200 spore gernimation protein GerA K06295 gerKA; spore germination protein KA
D UP12_16880 spore gernimation protein LC K06297 gerKC; spore germination protein KC
D UP12_12525 sporulation protein K06298 gerM; germination protein M
D UP12_15010 spore gernimation protein K06299 gerPA; spore germination protein PA
D UP12_15015 spore gernimation protein K06299 gerPA; spore germination protein PA
D UP12_05365 spore gernimation protein GerPA K06299 gerPA; spore germination protein PA
D UP12_05360 spore gernimation protein GerPB K06300 gerPB; spore germination protein PB
D UP12_05355 spore gernimation protein GerPC K06301 gerPC; spore germination protein PC
D UP12_05350 spore gernimation protein GerPD K06302 gerPD; spore germination protein PD
D UP12_05345 spore gernimation protein K06303 gerPE; spore germination protein PE
D UP12_05340 spore gernimation protein GerPF K06304 gerPF; spore germination protein PF
D UP12_17695 spore coat protein K06305 gerQ; spore germination protein Q
D UP12_09210 spore gernimation protein K06308 yfkR; spore germination protein
D UP12_10305 sporulation protein K06313 ypeB; spore germination protein
C 99993 Cell motility
D UP12_11145 lipoprotein for biofilm formation K19433 tapA; TasA anchoring/assembly protein
C 99995 Signaling proteins
D UP12_18700 tellurium resistance protein K05792 terA; tellurite resistance protein TerA
D UP12_13800 stress protein K05795 terD; tellurium resistance protein TerD
D UP12_01635 chemical-damaging agent resistance protein C K05795 terD; tellurium resistance protein TerD
D UP12_01640 chemical-damaging agent resistance protein C K05795 terD; tellurium resistance protein TerD
D UP12_12935 carbon starvation protein CstA K06200 cstA; carbon starvation protein
D UP12_07145 GTP-binding protein TypA K06207 typA; GTP-binding protein
D UP12_11495 phosphate starvation protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D UP12_07165 hypothetical protein K07175 phoH2; PhoH-like ATPase
D UP12_04665 protein prkA K07180 prkA; serine protein kinase
D UP12_05495 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D UP12_16855 capsular biosynthesis protein K07282 capA; gamma-polyglutamate biosynthesis protein CapA
D UP12_16860 capsular biosynthesis protein K22116 capC; gamma-polyglutamate biosynthesis protein CapC
D UP12_12355 cytochrome C assembly protein K02497 hemX; HemX protein
C 99994 Others
B
B 09194 Poorly characterized
C 99996 General function prediction only
D UP12_10610 GNAT family acetyltransferase K02348 elaA; ElaA protein
D UP12_05745 competence protein K06198 coiA; competence protein CoiA
D UP12_09960 ATP-dependent helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D UP12_13450 tRNA-binding protein K06878 K06878; tRNA-binding protein
D UP12_09385 tRNA-binding protein K06878 K06878; tRNA-binding protein
D UP12_05765 thiol management oxidoreductase K06886 glbN; hemoglobin
D UP12_08240 membrane protein K06994 K06994; putative drug exporter of the RND superfamily
D UP12_08260 membrane protein K06994 K06994; putative drug exporter of the RND superfamily
D UP12_18765 MMPL domain-containing protein K06994 K06994; putative drug exporter of the RND superfamily
D UP12_07290 esterase K07001 K07001; NTE family protein
D UP12_11085 hypothetical protein K07001 K07001; NTE family protein
D UP12_15375 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D UP12_15390 Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D UP12_04355 membrane protein K07038 K07038; inner membrane protein
D UP12_15665 membrane protein K07038 K07038; inner membrane protein
D UP12_04005 ribonuclease K07058 K07058; membrane protein
D UP12_13100 exlusion protein FxsA K07113 fxsA; UPF0716 protein FxsA
D UP12_01360 sulfurtransferase K07146 K07146; UPF0176 protein
D UP12_01535 glyoxalase K04750 phnB; PhnB protein
D UP12_05215 phosphatase K15640 K15640; uncharacterized phosphatase
D UP12_07230 cytochrome C oxidase assembly protein K02862 ctaG; putative membrane protein
D UP12_02595 hypothetical protein K03095 sprL; SprT-like protein
D UP12_05170 hypothetical protein K01421 yhgE; putative membrane protein
D UP12_15050 integrase K01421 yhgE; putative membrane protein
D UP12_16350 membrane protein K08972 K08972; putative membrane protein
D UP12_09465 membrane protein K08976 K08976; putative membrane protein
D UP12_02515 membrane protein K08981 K08981; putative membrane protein
D UP12_18335 membrane protein K08987 K08987; putative membrane protein
D UP12_12885 membrane protein K08989 K08989; putative membrane protein
D UP12_15320 protein PsiE K13256 psiE; protein PsiE
D UP12_18565 alkylphosphonate utilization protein K06193 phnA; protein PhnA
C 99997 Function unknown
D UP12_17495 hypothetical protein K06885 K06885; uncharacterized protein
D UP12_01240 hypothetical protein K06888 K06888; uncharacterized protein
D UP12_05545 esterase K06889 K06889; uncharacterized protein
D UP12_10645 serine peptidase K06889 K06889; uncharacterized protein
D UP12_08790 CoA-binding protein K06929 K06929; uncharacterized protein
D UP12_15035 phosphohydrolase K06950 K06950; uncharacterized protein
D UP12_09820 phosphohydrolase K06950 K06950; uncharacterized protein
D UP12_07790 RNA-binding protein K06960 K06960; uncharacterized protein
D UP12_00635 hypothetical protein K06962 K06962; uncharacterized protein
D UP12_14765 peptidase K06973 K06973; uncharacterized protein
D UP12_18970 enterobactin esterase K07017 K07017; uncharacterized protein
D UP12_04765 glyoxalase bleomycin resistance protein dioxygenase K07032 K07032; uncharacterized protein
D UP12_09235 membrane protein K07034 K07034; uncharacterized protein
D UP12_13465 PTS sugar transporter subunit IIC K07035 K07035; uncharacterized protein
D UP12_01565 sec-c motif domain protein K07039 K07039; uncharacterized protein
D UP12_04290 multidrug MFS transporter K07071 K07071; uncharacterized protein
D UP12_01895 hypothetical protein K07074 K07074; uncharacterized protein
D UP12_01310 membrane protein K07090 K07090; uncharacterized protein
D UP12_16455 membrane protein K07090 K07090; uncharacterized protein
D UP12_12510 metallophosphatase K07095 K07095; uncharacterized protein
D UP12_06805 metallophosphoesterase K07098 K07098; uncharacterized protein
D UP12_10335 hypothetical protein K07098 K07098; uncharacterized protein
D UP12_12215 transcriptional regulator K07105 K07105; uncharacterized protein
D UP12_16295 hypothetical protein K07118 K07118; uncharacterized protein
D UP12_05290 membrane protein K07120 K07120; uncharacterized protein
D UP12_01255 oxidoreductase K07124 K07124; uncharacterized protein
D UP12_10710 oxidoreductase K07124 K07124; uncharacterized protein
D UP12_02905 oxidoreductase K07124 K07124; uncharacterized protein
D UP12_13710 hypothetical protein K07139 K07139; uncharacterized protein
D UP12_01170 membrane protein K07148 K07148; uncharacterized protein
D UP12_15335 hypothetical protein K07148 K07148; uncharacterized protein
D UP12_18930 membrane protein K07148 K07148; uncharacterized protein
D UP12_02050 membrane protein K07149 K07149; uncharacterized protein
D UP12_13845 hypothetical protein K08998 K08998; uncharacterized protein
D UP12_11525 hypothetical protein K09117 K09117; uncharacterized protein
D UP12_02510 membrane protein K09167 K09167; uncharacterized protein
D UP12_01760 hypothetical protein K09190 K09190; uncharacterized protein
D UP12_17490 hypothetical protein K09388 K09388; uncharacterized protein
D UP12_10455 hypothetical protein K09763 K09763; uncharacterized protein
D UP12_08135 hypothetical protein K09764 K09764; uncharacterized protein
D UP12_11440 hypothetical protein K09768 K09768; uncharacterized protein
D UP12_00215 hypothetical protein K09770 K09770; uncharacterized protein
D UP12_15105 membrane protein K09775 K09775; uncharacterized protein
D UP12_06830 hypothetical protein K09776 K09776; uncharacterized protein
D UP12_14805 membrane protein K09779 K09779; uncharacterized protein
D UP12_04670 stress response protein K09786 K09786; uncharacterized protein
D UP12_07775 hypothetical protein K09787 K09787; uncharacterized protein
D UP12_11330 membrane protein K09793 K09793; uncharacterized protein
D UP12_05500 hypothetical protein K00243 K00243; uncharacterized protein
D UP12_13575 hypothetical protein K09925 K09925; uncharacterized protein
D UP12_01770 methyltransferase K09967 K09967; uncharacterized protein
D UP12_08710 hypothetical protein K09976 K09976; uncharacterized protein
D UP12_08555 iron chaperone K05937 K05937; uncharacterized protein
D UP12_11360 nucleotidase K05967 K05967; uncharacterized protein
D UP12_10270 membrane protein K05739 seaA; uncharacterized protein
D UP12_09955 hypothetical protein K07502 yprB; uncharacterized protein
D UP12_12245 hypothetical protein K07584 ysxB; uncharacterized protein
D UP12_06175 hypothetical protein K07220 K07220; uncharacterized protein
D UP12_04385 hypothetical protein K07586 ygaC; uncharacterized protein
D UP12_08120 hypothetical protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024