+F Chromosome and associated proteins KO
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Chromosome and Associated Proteins - Clostridium acetobutylicum EA 2018
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AEukaryotic type
B Sister chromatid cohesion proteins
C Cohesin complex
C Adherin complex
C CTF18-RFC complex
C Fork protection complex
C Other sister chromatid cohesion factors
B Meiosis-specific proteins
C Cohesin complex and associated proteins
C Synaptonemal complex
C DSB formation-related proteins
C Others
B Nucleosome assembly factors
C Histones
C Histone chaperones
D Nucleoplasmins
D NAPs (Nucleosome assembly proteins)
D CAF-1
D FACT complex
D Other Histone chaperones and regulators
C HMG (high mobility group) proteins
B Histone modification proteins
C HATs (histone acetyltransferases)
C HAT complexes
D PCAF complex
D STAGA complex
D TFTC complex
D TIP60 complex
D HBO1 complex
D MOZ/MORF complex
D SAGA complex
D SLIK complex
D ADA-HAT complex
D HAT-A2 complex
D ATAC complex
D HATB complex
D NSL complex
D MSL complex
D NuA3 complex
D NuA4 complex
D SAS complex
C HDACs (histone deacetylases)
D Class I HDACs
D Class II HDACs
D SIRTs (sirtuins, class III HDACs)
D Class IV HDACs
C HDAC complexes
D Sin3A-HDAC complex
D BRAF-HDAC complex
D REST complex
D SHIP complex
D MiDAC complex
D SMART complex
D Other HDAC associated proteins
C HMTs (histone methyltransferases)
D HKMTs (histone lysine methyltransferases)
D PRMTs (protein arginine metyltransferases)
C HMT complexes
D COMPASS/SET1 complex
D COMPASS/SET1 complex (yeast)
D MLL-HCF complex
D MLL3/MLL4 complex
D Dot1-containing complex
C Histone demethylases
C Polycomb repressive complex (PRC) and associated proteins
D Canonical PRC1 (PRC1.2/1.4)
E PRC1.4 specific proteins
D Noncanonical PRC1 (PRC1.1)
D Noncanonical PRC1 (PRC1.3/1.5)
D Noncanonical PRC1 (PRC1.6)
D PRC2.1
D PRC2.2
D PR-DUB complex
D Other PRC associated proteins
C Sir proteins
C Other histone modification proteins
B Chromosome condensation proteins
C Condensin I
C Condensin II
C Other regulators of chromosome condensation
B Centromeric chromatin formation proteins
C Kinetochore proteins
D Centromere proteins
D CPC (chromosomal passenger complex)
D KMN network proteins
E MIS12 complex
E NDC80 complex
D Mis6 complex
D COMA complex
D NMS complex
E NDC80 complex
E MIND kinetochore complex
D MIS16-MIS18 complex
D DASH complex
D CBF3 complex
D Others
C SAC (spindle assembly checkpoint) factors
D Core SAC proteins
D Motor proteins
E RZZ complex
E Dynein complex
D Protein kinases
D Others
C Other centromeric chromatin formation proteins
D Shugoshin
D PP2A (protein phosphatase 2A)
B Heterochromatin formation proteins
C HP1 (heterochromatin protein 1)
C MBPs (metylated DNA binding proteins)
C Other heterochromatin formation proteins
D CEA_G1234 DNA-methyltransferase (cytosine-specific) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CEA_G1517 DNA-methyltransferase (cytosine-specific) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Gene silencing
C RISC (RNA-induced silencing complex)
C piRNA pathway
C RNA interference (RNAi) pathway
D RITS (RNA-induced transcriptional silencing) complex
D RDRC (RNA-directed RNA polymerase complex)
D Other RNAi proteins
C microRNA pathway
D Microprocessor complex
E CEA_G1761 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RISC loading complex
D Other miRNA pathway proteins
C Transposable elements
B Centrosome formation proteins
C Centriole proteins
C Pericentriolar materials (PCM)
D Centriolar satellite
D Other PCM proteins
C Cyclins
C Kinases and associated factors
D Kinase anchoring protein
C Microtubules and associated factors
D gamma-tubulin ring complex
D Other tubulins
D Dynactin complex
D BRISC complex
D Microtubule-associated proteins
C Augmin complex
C Centrosome duplication proteins
D Centriole replication proteins
D Regulators of centriole replication
D Other centrosome duplication proteins
C Nde1-Su48 complex
C LINC complex
C 3M complex
C Other centriole associated proteins
D CEA_P0063 alf; fructose-1,6-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
C Spindle formation proteins
B Sister chromatid separation proteins
C Securin and associated proteins
C Separase
C APC/C complex
C Aurora kinases
D Regulators of Aurora kinases
C TACC proteins
C Polo kinases
C Early mitotic inhibitors
B Chromatin remodeling factors
C BAF complex
C PBAF complex
C GBAF(ncBAF) complex
C CHRAC complex
C RSF complex
C WICH complex
C B-WICH complex
C NORC complex
C BRF complex
C NuRD complex
C NuRF complex
C NuRF complex (fruit fly)
C CERF complex
C SRCAP complex
C INO80 complex
C INO80 complex (yeast)
C RSC complex
C SWI/SNF complex
C SWR1 complex
C ASTRA complex
C Other chromatin remodeling factors
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AProkaryotic type
B Nucleoid associated proteins
C HNS (histone-like nucleoid structuring protein)
C HU (heat unstable protein)
D CEA_G3215 hbs; DNA binding protein HU K03530 hupB; DNA-binding protein HU-beta
C IHF (integration host factor)
C Other nucleoid associated proteins
D CEA_G0001 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D CEA_G1847 Host factor I protein Hfq K03666 hfq; host factor-I protein
D CEA_G1483 Transcriptional regulator, Lrp family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
B Chromosome partitioning proteins
C MukBEF complex
C Condensin-like complex
D CEA_G1764 smc; Chromosome segregation SMC protein, ATPase K03529 smc; chromosome segregation protein
D CEA_G2075 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D CEA_G2074 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
C Divisome proteins
D CEA_G1705 ftsA; Cell division protein, ftsA K03590 ftsA; cell division protein FtsA
D CEA_G0508 ftsE; Cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D CEA_G0418 DNA segregation ATP-ase FtsK/SpoIIIE (three ATPase), contains FHA domain K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CEA_G3716 DNA segregation ATPase, FtsK/SpoIIIE family K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CEA_G0039 DNA segregation ATPase FtsK/SpoIIIE family protein, contains FHA domain protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CEA_G1825 Sporulation protein SpoIIIE, DNA segregation ATPase K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CEA_G2145 Conserved hypothetical protein K03586 ftsL; cell division protein FtsL
D CEA_G2139 divIB; Cell division septal protein divIB/FtsQ K03589 ftsQ; cell division protein FtsQ
D CEA_G2140 spoVE; Stage V sporulation protein E, FtsW/MrdB/SpoVE family K03588 ftsW; cell division protein FtsW
D CEA_G0509 ftsX; Cell division protein (ftsX) K09811 ftsX; cell division transport system permease protein
D CEA_G2670 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CEA_G1706 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CEA_G2369 Conserved hypothetical protein K09888 zapA; cell division protein ZapA
D CEA_G3098 amidase, germination specific K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C Inhibitors of FtsZ assembly
D CEA_G1261 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC
D CEA_G1262 minD; Septum site-determining protein MinD, ATPase K03609 minD; septum site-determining protein MinD
D CEA_G1263 Cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D CEA_G2132 Cell division protein DivIVA K04074 divIVA; cell division initiation protein
D CEA_G2134 Conserved hypothetical protein K09772 sepF; cell division inhibitor SepF
C Other chromosome partitioning proteins
D CEA_G2865 mreV; Shape-determining protein envB (HSP70 family charepones) K03569 mreB; rod shape-determining protein MreB and related proteins
D CEA_G1255 mreB; mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CEA_G1256 mreC; Shape-determining protein mreC K03570 mreC; rod shape-determining protein MreC
D CEA_G1257 membrane protein K03571 mreD; rod shape-determining protein MreD
D CEA_G1264 rodA; Cell division protein, rodA/ftsW/spoVE family K05837 rodA; rod shape determining protein RodA
D CEA_G3737 soj; Chromosome partitioning MinD-family ATPase, SOJ K03496 parA; chromosome partitioning protein
D CEA_G3736 spoOJ; Stage 0 sporulation J, ParB family of DNA-binding proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CEA_G3738 Stage 0 sporulation J, ParB family of DNA-binding proteins K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CEA_G1642 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CEA_G1641 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CEA_G3740 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CEA_G3739 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CEA_G2080 Integrase/recombinase XerD family K04763 xerD; integrase/recombinase XerD
D CEA_G1843 site-specific recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD
D CEA_G1182 xerC; site-specific tyrosine recombinase XerC K04763 xerD; integrase/recombinase XerD
D CEA_G3216 Fusion of Uroporphyrinogen-III methylase related protein and MAZG family protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D CEA_G2988 MinD family ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CEA_G2645 GTPase EngB K03978 engB; GTP-binding protein
D CEA_G0524 Conserved hypothetical protein K09762 whiA; cell division protein WhiA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 16, 2024