+D GENES KO #

  KEGG Orthology (KO) - Clostridium botulinum B Eklund 17B (NRP)

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:cbk00010] D CLL_A2056 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CLL_A3397 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CLL_A0403 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CLL_A3337 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLL_A0769 phosphofructokinase family protein K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CLL_A2533 fbp; fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D CLL_A3113 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLL_A1301 probable fructose-bisphosphate aldolase 1 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLL_A3064 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CLL_A3066 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CLL_A3065 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CLL_A3058 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CLL_A3055 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CLL_A2841 pyruvate kinase family protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLL_A3336 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLL_A0557 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLL_A0910 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D CLL_A3389 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLL_A0790 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CLL_A2353 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CLL_A2569 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CLL_A3511 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CLL_A1665 aldehyde dehydrogenase, dimeric NADP-preferring K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CLL_A1114 CoA-binding domain protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D CLL_A2461 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CLL_A2040 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9] D CLL_A2094 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CLL_A1497 glycosyl hydrolase, family 4 K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CLL_A1519 putative beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CLL_A3422 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CLL_A3423 PTS system, glucose-like IIB component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] C 00020 Citrate cycle (TCA cycle) [PATH:cbk00020] D CLL_A0129 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CLL_A2649 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CLL_A3389 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLL_A0278 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D CLL_A0279 fumB; fumarate hydratase, class I K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D CLL_A1699 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D CLL_A0790 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CLL_A2353 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:cbk00030] D CLL_A0403 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CLL_A2914 conserved hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D CLL_A1312 gnd; 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CLL_A1223 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CLL_A3355 transketolase, pyridine binding subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLL_A3356 transketolase, thiamine diphosphate binding subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLL_A3528 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLL_A1583 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLL_A3529 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLL_A1586 putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CLL_A0486 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CLL_A0734 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D CLL_A1527 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D CLL_A1582 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D CLL_A2461 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CLL_A2222 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CLL_A0149 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CLL_A1659 gp63 K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CLL_A2040 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9] D CLL_A1310 gntK; gluconokinase K25031 gntK; gluconokinase [EC:2.7.1.12] D CLL_A3358 PTS system, IIc component K17466 dgaC; D-glucosaminate PTS system EIIC component D CLL_A3113 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLL_A1301 probable fructose-bisphosphate aldolase 1 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLL_A2533 fbp; fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D CLL_A3337 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLL_A0769 phosphofructokinase family protein K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:cbk00040] D CLL_A3172 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLL_A3261 putative hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D CLL_A3262 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D CLL_A1223 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CLL_A2955 araB; ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16] D CLL_A3333 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D CLL_A3334 L-iditol 2-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] C 00051 Fructose and mannose metabolism [PATH:cbk00051] D CLL_A3455 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CLL_A2057 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CLL_A3124 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CLL_A0368 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CLL_A3337 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLL_A0769 phosphofructokinase family protein K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CLL_A2533 fbp; fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D CLL_A0401 sorbitol-6-phosphate 2-dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140] D CLL_A2297 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D CLL_A3334 L-iditol 2-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D CLL_A3113 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLL_A1301 probable fructose-bisphosphate aldolase 1 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLL_A3064 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CLL_A0538 dhaKL; dihydroxyacetone kinase, DhaK/DhaL subunit K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15] D CLL_A0486 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CLL_A2296 PTS system, fructose-specific component family K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CLL_A2126 PTS system, fructose-specific component family K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CLL_A3360 PTS system fructose IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D CLL_A1373 PTS system, mannose/fructose/sorbose family, IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D CLL_A1374 PTS system sorbose-specific iic component K02795 manY; mannose PTS system EIIC component D CLL_A1375 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component D CLL_A3357 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component D CLL_A0400 PTS system, glucitol/sorbitol-specific, IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D CLL_A0397 PTS system, glucitol/sorbitol-specific, IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component D CLL_A3359 PTS system sorbose subfamily IIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206] C 00052 Galactose metabolism [PATH:cbk00052] D CLL_A1708 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CLL_A3241 NDP-sugar dehydratase or epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CLL_A2330 NAD dependent epimerase/dehydratase family K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CLL_A3172 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLL_A2461 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CLL_A2056 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CLL_A3397 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CLL_A3126 pfkB; 1-phosphofructokinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144] D CLL_A3337 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLL_A0769 phosphofructokinase family protein K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CLL_A3127 class II aldolase, tagatose bisphosphate family K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40] D CLL_A3456 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D CLL_A0330 glycosyl hydrolase, family 13 K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D CLL_A0135 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D CLL_A3534 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D CLL_A3128 PTS system fructose IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D CLL_A3133 PTS system, mannose/fructose/sorbose family, IIB component K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D CLL_A3132 PTS system sorbose-specific iic component K02746 agaW; N-acetylgalactosamine PTS system EIIC component D CLL_A3131 PTS system mannose/fructose/sorbose family IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component D CLL_A3129 AgaS K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-] C 00053 Ascorbate and aldarate metabolism [PATH:cbk00053] D CLL_A3266 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CLL_A3532 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CLL_A3531 PTS sysytem, mannitol-specific enzyme II, B component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CLL_A3264 putative PTS system, L-Ascorbate family, IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CLL_A3265 ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component D CLL_A3530 ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component D CLL_A3267 metal-dependent hydrolase K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-] D CLL_A3261 putative hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D CLL_A3262 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D CLL_A1665 aldehyde dehydrogenase, dimeric NADP-preferring K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:cbk00500] D CLL_A3060 phosphotransferase system domain protein K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D CLL_A3458 pts system, sucrose-specific iibc component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D CLL_A3456 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D CLL_A0330 glycosyl hydrolase, family 13 K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D CLL_A3172 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLL_A1500 PTS system, lactose/cellobiose-specific family, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CLL_A2093 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CLL_A2096 PTS system, diacetylchitobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CLL_A1499 PTS system, lactose/cellobiose-specific family, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CLL_A1503 PTS system, lactose/cellobiose family IIC component K02761 celB; cellobiose PTS system EIIC component D CLL_A2095 PTS system, lactose/cellobiose family IIC component K02761 celB; cellobiose PTS system EIIC component D CLL_A2094 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CLL_A1497 glycosyl hydrolase, family 4 K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CLL_A1519 putative beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CLL_A2338 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D CLL_A3412 glgD; glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CLL_A3413 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CLL_A3416 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D CLL_A3417 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CLL_A0977 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D CLL_A3415 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D CLL_A1700 amyX; alpha-dextran endo-1,6-alpha-glucosidase K01200 pulA; pullulanase [EC:3.2.1.41] D CLL_A2978 pulA; pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41] D CLL_A2370 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D CLL_A2022 neopullulanase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D CLL_A3414 amylopullulanase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D CLL_A0135 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D CLL_A3534 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D CLL_A0976 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D CLL_A3422 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CLL_A0331 pts system, iibc component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208] D CLL_A0332 endonuclease/exonuclease/phosphatase family protein K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90] D CLL_A1821 treP; pts system, trehalose-specific iibc component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D CLL_A1820 treC; alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93] D CLL_A2058 alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93] D CLL_A2461 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CLL_A2056 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CLL_A3397 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CLL_A0403 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CLL_A3455 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cbk00520] D CLL_A3146 chitinase B K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D CLL_A2471 chitinase B K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D CLL_A0620 chitinase A K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D CLL_A1378 chiA; chitinase A K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D CLL_A1445 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D CLL_A3422 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CLL_A0718 nagE; pts system, N-acetylglucosamine-specific iibc component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D CLL_A3135 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D CLL_A0716 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D CLL_A0717 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D CLL_A3455 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CLL_A0338 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CLL_A0300 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CLL_A0148 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CLL_A3059 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D CLL_A0501 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CLL_A3552 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CLL_A3343 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CLL_A2336 sialic acid synthase K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56] D CLL_A0489 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CLL_A3370 UDP-glucose 6-dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D CLL_A3174 lipopolysaccharide biosynthesis protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D CLL_A3371 hexapeptide transferase family protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D CLL_A3182 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] D CLL_A0832 sialic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97] D CLL_A1553 UDP-N-acetylglucosamine 2-epimerase K18429 legG; GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing) [EC:3.2.1.184] D CLL_A1556 spore coat polysaccharide biosynthesis protein SpsE K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101] D CLL_A0691 transcriptional regulator, AraC family K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D CLL_A3423 PTS system, glucose-like IIB component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D CLL_A2056 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CLL_A3397 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CLL_A2461 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CLL_A3172 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLL_A1708 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CLL_A3241 NDP-sugar dehydratase or epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CLL_A2330 NAD dependent epimerase/dehydratase family K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CLL_A3360 PTS system fructose IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D CLL_A1373 PTS system, mannose/fructose/sorbose family, IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D CLL_A1374 PTS system sorbose-specific iic component K02795 manY; mannose PTS system EIIC component D CLL_A1375 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component D CLL_A3357 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component D CLL_A0403 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CLL_A2057 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CLL_A3124 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CLL_A0368 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CLL_A2338 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D CLL_A2337 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D CLL_A2328 DegT/DnrJ/EryC1/StrS aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1] D CLL_A3412 glgD; glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CLL_A3413 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:cbk00620] D CLL_A0790 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CLL_A2353 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CLL_A3389 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLL_A2573 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CLL_A1465 acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] D CLL_A1235 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CLL_A1234 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CLL_A2841 pyruvate kinase family protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLL_A3336 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLL_A0557 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLL_A1156 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CLL_A1152 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CLL_A1154 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CLL_A1155 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CLL_A1665 aldehyde dehydrogenase, dimeric NADP-preferring K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CLL_A1989 propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D CLL_A1114 CoA-binding domain protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D CLL_A1364 oxidase, FAD-binding K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436] D CLL_A0365 FAD/FMN-containing dehydrogenase K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436] D CLL_A0364 electron transfer flavoprotein, alpha subunit/FixB family protein K26114 lctC; lactate dehydrogenase (NAD+,ferredoxin) subunit LctC D CLL_A0363 electron transfer flavoprotein, beta subunit/FixA family protein K26115 lctB; lactate dehydrogenase (NAD+,ferredoxin) subunit LctB D CLL_A2569 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CLL_A3511 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CLL_A1844 oxidoreductase, aldo/keto reductase family K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-] D CLL_A1033 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CLL_A3577 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CLL_A1699 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D CLL_A0278 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D CLL_A0279 fumB; fumarate hydratase, class I K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D CLL_A0910 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D CLL_A0490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLL_A1322 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D CLL_A0128 nifV; homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cbk00630] D CLL_A0129 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CLL_A0490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLL_A1060 HAD hydrolase, family IA K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D CLL_A3032 probable hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D CLL_A0073 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLL_A1084 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLL_A3389 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLL_A1570 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D CLL_A2354 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] C 00640 Propanoate metabolism [PATH:cbk00640] D CLL_A1989 propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D CLL_A1114 CoA-binding domain protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D CLL_A1235 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CLL_A1234 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CLL_A3389 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLL_A2573 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CLL_A0374 bcd; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CLL_A1988 acyl-coa dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CLL_A1365 acyl-coa dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CLL_A1156 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CLL_A1152 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CLL_A1154 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CLL_A1155 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CLL_A2569 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CLL_A3511 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CLL_A0571 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D CLL_A0537 dhaD; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D CLL_A1018 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D CLL_A1844 oxidoreductase, aldo/keto reductase family K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-] D CLL_A2098 1,3-propanediol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202] D CLL_A1748 ethanolamine utilization protein EutE K13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87] D CLL_A2134 ethanolamine utilization protein EutE K13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87] C 00650 Butanoate metabolism [PATH:cbk00650] D CLL_A0490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLL_A0377 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CLL_A0373 crt; 3-hydroxybutyryl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D CLL_A1990 3-hydroxybutyryl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D CLL_A0374 bcd; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CLL_A1988 acyl-coa dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CLL_A1365 acyl-coa dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CLL_A0698 CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D CLL_A2133 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D CLL_A2132 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D CLL_A0699 CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D CLL_A0297 buk; butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7] D CLL_A0296 ptb; phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19] D CLL_A1465 acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] D CLL_A2510 bdhA; NADH-dependent butanol dehydrogenase K00100 bdhAB; butanol dehydrogenase [EC:1.1.1.-] D CLL_A2573 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CLL_A0790 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CLL_A2353 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CLL_A2135 putative acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4] D CLL_A1797 adh; NADP-dependent alcohol dehydrogenase K23259 adh; isopropanol dehydrogenase (NADP+) [EC:1.1.1.80] D CLL_A3272 thiamine pyrophosphate enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLL_A2334 thiamine pyrophosphate enzyme TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLL_A0326 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLL_A0727 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLL_A0321 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CLL_A0726 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CLL_A0664 (R,R)-butanediol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] C 00660 C5-Branched dibasic acid metabolism [PATH:cbk00660] D CLL_A3272 thiamine pyrophosphate enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLL_A2334 thiamine pyrophosphate enzyme TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLL_A0326 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLL_A0727 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLL_A0321 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CLL_A0726 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CLL_A0322 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CLL_A0323 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CLL_A0324 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:cbk00562] D CLL_A2118 phospholipase C zinc-binding K01114 plc; phospholipase C [EC:3.1.4.3] D CLL_A1305 inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D CLL_A0700 oxidoreductase family protein K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-] D CLL_A1306 inosose dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44] D CLL_A1304 probable malonic semialdehyde oxidative decarboxylase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D CLL_A1303 myo-inositol catabolism protein IolB K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D CLL_A1302 protein IolC K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D CLL_A3064 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:cbk00190] D CLL_A2309 putative iron hydrogenase, gamma subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D CLL_A2308 putative iron hydrogenase, electron-transfer subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D CLL_A2307 iron hydrogenase 1 K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D CLL_A0496 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CLL_A0498 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CLL_A0497 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CLL_A0495 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CLL_A0499 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CLL_A0492 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CLL_A0494 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CLL_A0493 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CLL_A2861 ntpA; V-type sodium ATPase, catalytic A subunit K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D CLL_A2860 ntpB; V-type sodium ATPase, B subunit K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D CLL_A2863 ntpC; V-type sodium ATPase, C subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D CLL_A2859 ntpD; V-type sodium ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D CLL_A2864 ntpE; V-type sodium ATPase, E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D CLL_A2862 ntpG; V-type sodium ATPase, G subunit K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D CLL_A2867 putative V-type ATPase subunit K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H D CLL_A2866 ntpI; V-type sodium ATPase, I subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D CLL_A2865 ntpK; V-type sodium ATPase, K subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D CLL_A0867 putative manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:cbk00710] D CLL_A3065 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CLL_A3066 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CLL_A3113 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLL_A1301 probable fructose-bisphosphate aldolase 1 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLL_A2533 fbp; fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D CLL_A3355 transketolase, pyridine binding subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLL_A3356 transketolase, thiamine diphosphate binding subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLL_A3528 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLL_A1583 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLL_A3529 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLL_A0486 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CLL_A3064 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CLL_A1223 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CLL_A1586 putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CLL_A0910 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00720 Other carbon fixation pathways [PATH:cbk00720] D CLL_A0790 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CLL_A2353 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CLL_A0910 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D CLL_A1699 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D CLL_A0278 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D CLL_A0279 fumB; fumarate hydratase, class I K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D CLL_A0490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLL_A2649 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CLL_A0129 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CLL_A1156 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CLL_A1152 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CLL_A1154 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CLL_A1155 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CLL_A0173 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D CLL_A2405 folD; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CLL_A2454 methenyltetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D CLL_A2856 metF; methylenetetrahydrofolate reductase (NAD(P)H) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D CLL_A1234 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CLL_A1235 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:cbk00680] D CLL_A1084 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLL_A3055 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CLL_A0538 dhaKL; dihydroxyacetone kinase, DhaK/DhaL subunit K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15] D CLL_A3113 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLL_A1301 probable fructose-bisphosphate aldolase 1 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLL_A2533 fbp; fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D CLL_A3337 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLL_A0769 phosphofructokinase family protein K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CLL_A1235 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CLL_A1234 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CLL_A3058 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CLL_A3438 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CLL_A0084 putative 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] C 00910 Nitrogen metabolism [PATH:cbk00910] D CLL_A0893 ferredoxin-nitrite reductase K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1] D CLL_A2045 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D CLL_A0736 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D CLL_A1869 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D CLL_A0543 oxidoreductase, 2-nitropropane dioxygenase family K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D CLL_A0779 gluD; glutamate dehydrogenase, NAD-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CLL_A0073 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLL_A1048 gltA; glutamate synthase, NADPH, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CLL_A3213 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CLL_A3048 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CLL_A1049 gltD; glutamate synthase, NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CLL_A0666 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CLL_A0624 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D CLL_A0345 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D CLL_A1432 carbonate dehydratase K01743 E4.2.1.1; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:cbk00920] D CLL_A1275 DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D CLL_A3041 asrA; sulfite reductase, subunit A K16950 asrA; anaerobic sulfite reductase subunit A D CLL_A3040 asrB; sulfite reductase, subunit B K16951 asrB; anaerobic sulfite reductase subunit B D CLL_A3039 asrC; sulfite reductase, subunit C K00385 asrC; anaerobic sulfite reductase subunit C D CLL_A3079 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CLL_A3318 cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47] D CLL_A3080 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D CLL_A1571 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D CLL_A2913 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:cbk00061] D CLL_A1156 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CLL_A1152 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CLL_A1154 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CLL_A1155 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CLL_A1239 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D CLL_A1147 acyl carrier protein K02078 acpP; acyl carrier protein D CLL_A1149 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CLL_A1146 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CLL_A0673 putative 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CLL_A1151 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CLL_A1150 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLL_A1087 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLL_A1160 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLL_A1153 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CLL_A1148 putative enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:cbk00071] D CLL_A0490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLL_A0374 bcd; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CLL_A1988 acyl-coa dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CLL_A1365 acyl-coa dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CLL_A1665 aldehyde dehydrogenase, dimeric NADP-preferring K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:cbk00561] D CLL_A2354 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CLL_A1665 aldehyde dehydrogenase, dimeric NADP-preferring K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CLL_A0538 dhaKL; dihydroxyacetone kinase, DhaK/DhaL subunit K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15] D CLL_A0109 dhaK; dihydroxyacetone kinase, DhaK subunit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D CLL_A0110 dhaL; dihydroxyacetone kinase, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D CLL_A0111 dihydroxyacetone kinase, phosphotransfer subunit K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D CLL_A0537 dhaD; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D CLL_A1018 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D CLL_A1043 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CLL_A1238 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CLL_A3077 plsD; glycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CLL_A3469 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CLL_A0905 diacylglycerol kinase/PAP2 family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D CLL_A3316 lipA; triacylglycerol lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D CLL_A1759 putative membrane associated lipase, alpha/beta hydrolase family K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D CLL_A3317 putative lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D CLL_A0478 putative monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D CLL_A0449 arylsulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D CLL_A3401 sulfatase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D CLL_A2105 glycerol dehydratase large subunit K06120 dhaB; glycerol dehydratase large subunit [EC:4.2.1.30] D CLL_A2104 propanediol utilization: dehydratase, medium subunit K06121 dhbC; glycerol dehydratase medium subunit [EC:4.2.1.30] D CLL_A2103 coenzyme B12-dependent glycerol dehydratase, small subunit K06122 dhbE; glycerol dehydratase small subunit [EC:4.2.1.30] D CLL_A2098 1,3-propanediol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202] C 00564 Glycerophospholipid metabolism [PATH:cbk00564] D CLL_A1204 NAD-dependent glycerol-3-phosphate dehydrogenase family protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D CLL_A1044 glycerol-3-phosphate dehydrogenase, glpa K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D CLL_A3077 plsD; glycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CLL_A3469 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CLL_A0905 diacylglycerol kinase/PAP2 family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D CLL_A2118 phospholipase C zinc-binding K01114 plc; phospholipase C [EC:3.1.4.3] D CLL_A1734 lysophospholipase l2 pldb, hydrolase of alpha/beta superfamily K01048 pldB; lysophospholipase [EC:3.1.1.5] D CLL_A2313 lysophospholipase l2 pldb, hydrolase of alpha/beta superfamily K01048 pldB; lysophospholipase [EC:3.1.1.5] D CLL_A1826 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CLL_A3544 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CLL_A1263 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D CLL_A3086 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CLL_A0050 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D CLL_A1286 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CLL_A3147 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D CLL_A2311 cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D CLL_A2956 L-arabinose utilization protein K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] D CLL_A1369 pyridine nucleotide-disulphide oxidoreductase domain protein K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11] D CLL_A1370 pyridine nucleotide-disulphide oxidoreductase domain protein K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11] C 00565 Ether lipid metabolism D CLL_A2118 phospholipase C zinc-binding K01114 plc; phospholipase C [EC:3.1.4.3] C 00600 Sphingolipid metabolism [PATH:cbk00600] D CLL_A1445 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D CLL_A0451 lipolytic enzyme, G-D-S-L K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:cbk00230] D CLL_A1314 nudix-family hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D CLL_A1582 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D CLL_A2461 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CLL_A2222 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CLL_A0149 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CLL_A1659 gp63 K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CLL_A1105 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CLL_A1109 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D CLL_A1107 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CLL_A1102 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D CLL_A1106 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D CLL_A1103 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D CLL_A1104 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D CLL_A1292 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CLL_A1108 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CLL_A1030 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CLL_A1838 2,3-cyclic-nucleotide 2'phosphodiesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D CLL_A2858 nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D CLL_A2994 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CLL_A1703 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D CLL_A1585 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D CLL_A2969 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D CLL_A1194 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CLL_A1003 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D CLL_A0171 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D CLL_A0388 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CLL_A0992 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CLL_A0418 rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CLL_A1697 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D CLL_A0636 putative xanthine dehydrogenase, molybdopterin-binding subunit K00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4] D CLL_A0637 putative xanthine dehydrogenase, FAD-binding subunit K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4] D CLL_A0389 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CLL_A0635 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D CLL_A1211 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CLL_A0284 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CLL_A0285 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CLL_A0127 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CLL_A0912 deoxynucleotide triphosphohydrolase family protein K01129 dgt; dGTPase [EC:3.1.5.1] D CLL_A1031 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CLL_A2563 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D CLL_A3159 RelA/spoT family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D CLL_A1707 GTP-pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D CLL_A2601 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D CLL_A3123 adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1] D CLL_A3576 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CLL_A1394 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D CLL_A0092 5'-nucleotidase family protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D CLL_A0259 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CLL_A0631 conserved hypothetical protein K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D CLL_A0624 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:cbk00240] D CLL_A0824 ATP domain protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CLL_A0071 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CLL_A0070 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CLL_A2581 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CLL_A2580 aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D CLL_A2579 pyrC; dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3] D CLL_A2576 dihydroorotate dehydrogenase, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D CLL_A0629 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D CLL_A2577 pyrK; dihydroorotate dehydrogenase, electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D CLL_A2575 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CLL_A2578 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D CLL_A1260 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CLL_A0992 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CLL_A0561 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D CLL_A0476 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D CLL_A1804 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CLL_A3110 putative threonyl-tRNA synthetase/uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D CLL_A1056 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D CLL_A1838 2,3-cyclic-nucleotide 2'phosphodiesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D CLL_A2858 nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D CLL_A2994 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CLL_A1580 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D CLL_A0487 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D CLL_A2431 pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CLL_A0092 5'-nucleotidase family protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D CLL_A0735 pdp; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D CLL_A2970 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D CLL_A0127 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CLL_A2648 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D CLL_A0284 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CLL_A0285 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CLL_A0488 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D CLL_A1347 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D CLL_A0198 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D CLL_A0763 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CLL_A0480 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D CLL_A1349 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CLL_A3448 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CLL_A2318 hypothetical oxidoreductase YeiT K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D CLL_A2317 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D CLL_A0634 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:cbk00250] D CLL_A0792 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CLL_A3292 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D CLL_A1207 ansA; L-asparaginase, type II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CLL_A2568 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D CLL_A1395 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CLL_A2544 conserved domain protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CLL_A3114 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CLL_A3115 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CLL_A3576 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CLL_A1292 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CLL_A2581 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CLL_A2580 aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D CLL_A1048 gltA; glutamate synthase, NADPH, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CLL_A3213 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CLL_A3048 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CLL_A1049 gltD; glutamate synthase, NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CLL_A0666 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CLL_A0779 gluD; glutamate dehydrogenase, NAD-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CLL_A0073 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLL_A0824 ATP domain protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CLL_A0071 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CLL_A0070 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CLL_A0338 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CLL_A1105 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:cbk00260] D CLL_A1282 dapG; aspartate kinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4] D CLL_A1047 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CLL_A2485 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CLL_A1041 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CLL_A2897 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D CLL_A2898 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CLL_A1084 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLL_A2354 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CLL_A3058 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CLL_A3438 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CLL_A2339 putative flavin containing amine oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D CLL_A3389 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLL_A3086 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CLL_A3108 sdaAA; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CLL_A3109 sdaAB; L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CLL_A1070 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CLL_A1973 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:cbk00270] D CLL_A3079 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CLL_A3318 cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47] D CLL_A3080 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D CLL_A1571 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D CLL_A3320 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CLL_A2853 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CLL_A0515 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CLL_A1011 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D CLL_A1013 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D CLL_A3431 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D CLL_A1194 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CLL_A1701 amidohydrolase family protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D CLL_A0608 DNA-cytosine methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CLL_A3319 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D CLL_A2855 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D CLL_A1282 dapG; aspartate kinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4] D CLL_A1047 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CLL_A2485 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CLL_A1041 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CLL_A2913 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D CLL_A0347 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D CLL_A1088 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CLL_A0794 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CLL_A1666 gshAB; glutamate--cysteine ligase/gamma-glutamylcysteine synthetase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D CLL_A0792 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CLL_A3292 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D CLL_A2569 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CLL_A3511 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CLL_A3108 sdaAA; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CLL_A3109 sdaAB; L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CLL_A3438 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:cbk00280] D CLL_A1088 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CLL_A0794 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CLL_A3389 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLL_A0374 bcd; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CLL_A1988 acyl-coa dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CLL_A1365 acyl-coa dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CLL_A1665 aldehyde dehydrogenase, dimeric NADP-preferring K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CLL_A0490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cbk00290] D CLL_A1070 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CLL_A0322 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CLL_A0323 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CLL_A0324 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D CLL_A3272 thiamine pyrophosphate enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLL_A2334 thiamine pyrophosphate enzyme TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLL_A0326 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLL_A0727 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLL_A0321 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CLL_A0726 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CLL_A0327 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CLL_A0325 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CLL_A1088 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CLL_A0794 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CLL_A1322 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:cbk00300] D CLL_A1041 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CLL_A1282 dapG; aspartate kinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4] D CLL_A1047 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CLL_A2485 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CLL_A2486 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CLL_A3477 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CLL_A2487 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CLL_A2496 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D CLL_A3119 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CLL_A2428 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CLL_A3286 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CLL_A3000 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16] D CLL_A2445 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CLL_A2444 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:cbk00310] D CLL_A3389 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLL_A0490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLL_A0698 CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D CLL_A2133 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D CLL_A2132 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D CLL_A0699 CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D CLL_A1665 aldehyde dehydrogenase, dimeric NADP-preferring K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:cbk00220] D CLL_A3120 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D CLL_A3114 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CLL_A3115 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CLL_A0073 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLL_A0824 ATP domain protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CLL_A0071 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CLL_A0070 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CLL_A0624 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D CLL_A0779 gluD; glutamate dehydrogenase, NAD-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CLL_A0792 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CLL_A3292 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D CLL_A3117 argJ; glutamate N-acetyltransferase/amino-acid acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D CLL_A3118 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D CLL_A3116 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D CLL_A3119 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:cbk00330] D CLL_A1012 arginine 2-monooxygenase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D CLL_A1017 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D CLL_A1013 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D CLL_A1011 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D CLL_A1015 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D CLL_A1665 aldehyde dehydrogenase, dimeric NADP-preferring K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CLL_A2178 acetyltransferase, GNAT family K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D CLL_A2145 spermine/spermidine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D CLL_A2339 putative flavin containing amine oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D CLL_A3578 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D CLL_A0062 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CLL_A0063 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D CLL_A0792 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CLL_A3292 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:cbk00340] D CLL_A3211 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D CLL_A2893 hisJ; histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D CLL_A1665 aldehyde dehydrogenase, dimeric NADP-preferring K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CLL_A2339 putative flavin containing amine oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] C 00350 Tyrosine metabolism [PATH:cbk00350] D CLL_A0792 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CLL_A3292 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D CLL_A2339 putative flavin containing amine oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] C 00360 Phenylalanine metabolism [PATH:cbk00360] D CLL_A2339 putative flavin containing amine oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D CLL_A0377 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CLL_A0792 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CLL_A3292 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D CLL_A1367 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D CLL_A1978 enr; 2-enoate reductase K10797 enr; 2-enoate reductase [EC:1.3.1.31] C 00380 Tryptophan metabolism [PATH:cbk00380] D CLL_A3389 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLL_A0490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLL_A2339 putative flavin containing amine oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D CLL_A1665 aldehyde dehydrogenase, dimeric NADP-preferring K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CLL_A1367 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cbk00400] D CLL_A3144 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CLL_A3137 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CLL_A3143 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D CLL_A2227 aroD; 3-dehydroquinate dehydratase, type I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D CLL_A3138 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D CLL_A3142 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D CLL_A3141 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CLL_A3003 trpF; N-(5'phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D CLL_A1973 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CLL_A3140 chorismate mutase/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D CLL_A2896 putative ACT domain protein K06209 pheB; chorismate mutase [EC:5.4.99.5] D CLL_A3136 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CLL_A0792 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CLL_A3292 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:cbk00410] D CLL_A1665 aldehyde dehydrogenase, dimeric NADP-preferring K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D CLL_A2318 hypothetical oxidoreductase YeiT K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D CLL_A2317 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D CLL_A0634 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D CLL_A0374 bcd; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CLL_A1988 acyl-coa dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D CLL_A1365 acyl-coa dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] C 00430 Taurine and hypotaurine metabolism [PATH:cbk00430] D CLL_A1234 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D CLL_A1235 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:cbk00450] D CLL_A3320 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CLL_A2853 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CLL_A0768 aminotransferase, class V K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D CLL_A3210 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CLL_A0208 putative thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CLL_A2535 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CLL_A0646 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D CLL_A0112 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:cbk00460] D CLL_A1207 ansA; L-asparaginase, type II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CLL_A2568 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D CLL_A1084 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:cbk00470] D CLL_A1573 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CLL_A3075 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CLL_A0687 dltA; D-alanine--poly(phosphoribitol) ligase, subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D CLL_A0689 dltC; D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D CLL_A0074 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CLL_A0183 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CLL_A2428 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CLL_A3286 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:cbk00480] D CLL_A1666 gshAB; glutamate--cysteine ligase/gamma-glutamylcysteine synthetase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D CLL_A0558 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D CLL_A2649 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CLL_A1312 gnd; 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CLL_A1013 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:cbk00511] D CLL_A1445 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00540 Lipopolysaccharide biosynthesis [PATH:cbk00540] D CLL_A2335 putative phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D CLL_A2455 O-antigen polymerase family K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cbk00541] D CLL_A3172 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLL_A1708 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CLL_A3241 NDP-sugar dehydratase or epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CLL_A2330 NAD dependent epimerase/dehydratase family K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CLL_A3253 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CLL_A3251 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CLL_A3252 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CLL_A3435 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CLL_A3249 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D CLL_A3243 lipopolysaccharide biosynthesis protein RffA K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D CLL_A2338 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D CLL_A2337 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D CLL_A2328 DegT/DnrJ/EryC1/StrS aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1] D CLL_A2057 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CLL_A3124 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CLL_A0368 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CLL_A0148 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CLL_A0489 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CLL_A2336 sialic acid synthase K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56] D CLL_A0832 sialic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97] D CLL_A3370 UDP-glucose 6-dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D CLL_A3174 lipopolysaccharide biosynthesis protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D CLL_A3371 hexapeptide transferase family protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D CLL_A3182 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] C 00550 Peptidoglycan biosynthesis [PATH:cbk00550] D CLL_A0501 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CLL_A3552 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CLL_A3343 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CLL_A0145 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CLL_A0183 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CLL_A2445 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CLL_A3075 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CLL_A2444 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CLL_A1262 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CLL_A2911 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CLL_A2582 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CLL_A3452 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CLL_A2443 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CLL_A0788 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CLL_A1001 membrane carboxypeptidase MrcB K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CLL_A0566 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CLL_A2446 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D CLL_A3345 penicillin-binding protein K05364 pbpA; penicillin-binding protein A D CLL_A2367 dacF; serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CLL_A2362 putative D-alanyl-D-alanine carboxypeptidase DacB K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CLL_A0587 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CLL_A1481 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D CLL_A2585 Mur ligase family protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D CLL_A2586 glutamine amidotransferase, CobB/CobQ family K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:cbk00552] D CLL_A2582 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CLL_A3452 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CLL_A2459 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D CLL_A0687 dltA; D-alanine--poly(phosphoribitol) ligase, subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D CLL_A0689 dltC; D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D CLL_A0688 protein DltB K03739 dltB; membrane protein involved in D-alanine export D CLL_A0685 putative protein dltD K03740 dltD; D-alanine transfer protein D CLL_A0585 membrane-bound protein LytR K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D CLL_A0478 putative monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D CLL_A0449 arylsulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D CLL_A3401 sulfatase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D CLL_A3188 LicD family protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:cbk00543] D CLL_A3010 membrane-bound O-acyltransferase family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D CLL_A3079 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:cbk00730] D CLL_A3106 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D CLL_A1169 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CLL_A1999 putative thiazole biosynthesis protein K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D CLL_A1441 putative 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CLL_A2401 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CLL_A3105 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D CLL_A3104 thiE; thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D CLL_A0631 conserved hypothetical protein K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D CLL_A1222 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CLL_A1224 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D CLL_A0259 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CLL_A1417 TENA/THI-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:cbk00740] D CLL_A1297 riboflavin biosynthesis protein ribAB K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CLL_A1295 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CLL_A1298 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CLL_A1296 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CLL_A1277 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D CLL_A3105 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D CLL_A1314 nudix-family hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:cbk00750] D CLL_A3208 pyridoxine kinase family protein K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D CLL_A2898 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:cbk00760] D CLL_A2878 putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D CLL_A1703 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D CLL_A1585 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D CLL_A2969 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D CLL_A1838 2,3-cyclic-nucleotide 2'phosphodiesterase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D CLL_A2858 nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D CLL_A2994 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CLL_A0583 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D CLL_A1089 nadE; glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D CLL_A3395 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D CLL_A1660 nicotinamide phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] D CLL_A3387 NAD-dependent deacetylase, Sir2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D CLL_A2399 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:cbk00770] D CLL_A3272 thiamine pyrophosphate enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLL_A2334 thiamine pyrophosphate enzyme TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLL_A0326 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLL_A0727 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLL_A0321 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CLL_A0726 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CLL_A0327 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CLL_A0325 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CLL_A1138 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D CLL_A0174 coaX; pantothenate kinase, type III K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D CLL_A1213 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D CLL_A1230 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D CLL_A2644 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CLL_A3366 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D CLL_A1088 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CLL_A0794 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CLL_A2318 hypothetical oxidoreductase YeiT K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D CLL_A2317 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D CLL_A0634 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D CLL_A1665 aldehyde dehydrogenase, dimeric NADP-preferring K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:cbk00780] D CLL_A1151 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CLL_A1150 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLL_A1087 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLL_A1160 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLL_A1153 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CLL_A0722 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D CLL_A0358 radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6] D CLL_A0721 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D CLL_A2567 biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:cbk00785] D CLL_A3388 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CLL_A3389 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00790 Folate biosynthesis [PATH:cbk00790] D CLL_A3449 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CLL_A2503 tetrahydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D CLL_A1297 riboflavin biosynthesis protein ribAB K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CLL_A1980 ExsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CLL_A2950 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D CLL_A1165 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CLL_A1164 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D CLL_A0650 conserved hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D CLL_A1162 conserved hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] C 00670 One carbon pool by folate [PATH:cbk00670] D CLL_A3449 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CLL_A0173 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D CLL_A2405 folD; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CLL_A2454 methenyltetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D CLL_A1084 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLL_A1107 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CLL_A1108 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CLL_A1216 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CLL_A2853 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CLL_A1349 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CLL_A3448 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CLL_A2856 metF; methylenetetrahydrofolate reductase (NAD(P)H) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D CLL_A0346 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:cbk00860] D CLL_A2909 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D CLL_A2904 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CLL_A2905 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CLL_A2907 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D CLL_A2906 uroporphyrinogen III synthase/methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D CLL_A2908 precorrin-2 dehydrogenase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D CLL_A2939 sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D CLL_A2903 anaerobic Cobalt chelatase, CbiK K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D CLL_A2933 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D CLL_A2930 cobJ; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D CLL_A2932 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D CLL_A2931 CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D CLL_A2929 cobK; precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D CLL_A2936 cbiD; cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D CLL_A2934 cbiT; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196] D CLL_A2935 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289] D CLL_A2937 cobH; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D CLL_A2938 cobB; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D CLL_A2924 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D CLL_A2917 cobQ; cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D CLL_A2919 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D CLL_A2923 conserved hypothetical protein K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D CLL_A2921 conserved hypothetical protein K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D CLL_A2922 cobS; cobalamin-5-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D CLL_A2928 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D CLL_A2920 phosphoglycerate mutase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cbk00130] D CLL_A2945 flavodoxin K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:cbk00900] D CLL_A1441 putative 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CLL_A2401 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CLL_A1265 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D CLL_A0216 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D CLL_A0471 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D CLL_A0353 ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D CLL_A1267 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D CLL_A1805 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945 RP-S1; small subunit ribosomal protein S1 D CLL_A0490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLL_A2402 putative geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CLL_A1262 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CLL_A2911 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:cbk00906] D CLL_A1832 phytoene dehydrogenase family protein K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D CLL_A1665 aldehyde dehydrogenase, dimeric NADP-preferring K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CLL_A3355 transketolase, pyridine binding subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLL_A3356 transketolase, thiamine diphosphate binding subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLL_A3528 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLL_A1583 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLL_A3529 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:cbk00523] D CLL_A3253 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CLL_A3251 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CLL_A3252 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CLL_A3435 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CLL_A3249 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D CLL_A3251 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:cbk00946] D CLL_A0692 NADPH-dependent fmn reductase domain protein K26176 flr; flavone/flavonol reductase C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis [PATH:cbk00311] D CLL_A2615 penicillin amidase K24041 yxeI; penicillin V amidase [EC:3.5.1.11] D CLL_A2831 conserved hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:cbk00332] D CLL_A0062 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CLL_A0063 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:cbk00261] D CLL_A1282 dapG; aspartate kinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4] D CLL_A1047 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CLL_A2485 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CLL_A2486 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CLL_A3477 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CLL_A2487 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:cbk00521] D CLL_A2056 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CLL_A3397 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CLL_A2461 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CLL_A1305 inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D CLL_A3253 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CLL_A3251 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CLL_A3252 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CLL_A3435 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CLL_A3249 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D CLL_A2056 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D CLL_A3397 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:cbk00525] D CLL_A3253 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CLL_A3251 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:cbk00401] D CLL_A3136 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CLL_A0792 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CLL_A3292 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D CLL_A1149 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CLL_A1150 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLL_A1087 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLL_A1160 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D CLL_A1239 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D CLL_A1147 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D CLL_A0515 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:cbk00362] D CLL_A0377 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CLL_A0490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation D CLL_A0698 CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D CLL_A2133 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D CLL_A2132 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D CLL_A0699 CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:cbk00625] D CLL_A1665 aldehyde dehydrogenase, dimeric NADP-preferring K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation D CLL_A2007 hupL; [Ni/Fe] hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D CLL_A2008 hupS; [Ni/Fe] hydrogenase, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] C 00642 Ethylbenzene degradation C 00643 Styrene degradation D CLL_A1989 propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:cbk03020] D CLL_A0231 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CLL_A0232 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CLL_A0267 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CLL_A1212 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:cbk03010] D CLL_A0556 putative 30S ribosomal protein S1 homolog K02945 RP-S1; small subunit ribosomal protein S1 D CLL_A1805 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945 RP-S1; small subunit ribosomal protein S1 D CLL_A1258 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CLL_A0244 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CLL_A0266 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CLL_A0255 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CLL_A3587 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CLL_A0234 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CLL_A0252 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CLL_A0274 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CLL_A0237 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CLL_A0265 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CLL_A0233 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CLL_A0264 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CLL_A0251 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CLL_A1278 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CLL_A1246 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CLL_A0247 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CLL_A3585 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CLL_A0242 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CLL_A0883 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CLL_A0899 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CLL_A0228 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CLL_A0241 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CLL_A0238 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CLL_A0239 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CLL_A0250 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CLL_A0253 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CLL_A0230 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CLL_A3582 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CLL_A0229 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CLL_A0227 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CLL_A0273 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CLL_A0248 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CLL_A0257 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CLL_A0245 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CLL_A0268 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CLL_A0254 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CLL_A1250 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CLL_A2477 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CLL_A0578 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CLL_A0243 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CLL_A0240 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CLL_A0249 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CLL_A2223 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CLL_A2224 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CLL_A0580 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CLL_A1225 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CLL_A0246 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CLL_A0256 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CLL_A0479 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CLL_A1237 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CLL_A3604 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CLL_A2478 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CLL_A0263 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CLL_A0008 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3488 rrsG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3502 rrsJ; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A0186 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3516 rrsK; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3411 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3484 rrsF; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3493 rrsH; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3498 rrsI; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3421 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A0438 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3409 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3419 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3482 rrlF; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3486 rrlG; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A0190 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A0010 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3514 rrlK; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A0441 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3496 rrlI; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3500 rrlJ; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3491 rrlH; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3418 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3490 rrfH; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3499 rrfJ; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3408 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A0191 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3485 rrfG; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3481 rrfF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3508 rrfN; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3495 rrfI; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3513 rrfK; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A0011 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3383 rrfM; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:cbk00970] D CLL_A0013 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CLL_A3406 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CLL_A0187 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CLL_A0422 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLL_A2596 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLL_A2051 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLL_A2049 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLL_A0436 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLL_A0030 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLL_A3466 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLL_A0179 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CLL_A0181 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CLL_A0180 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CLL_A0442 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CLL_A3565 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CLL_A3569 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CLL_A3561 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CLL_A0193 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CLL_A1767 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CLL_A0424 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CLL_A0431 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CLL_A3563 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CLL_A3567 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CLL_A3571 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CLL_A2943 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CLL_A0421 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLL_A0428 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLL_A0427 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLL_A0434 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLL_A0435 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLL_A0423 tRNA-His K14226 tRNA-His; tRNA His D CLL_A0430 tRNA-His K14226 tRNA-His; tRNA His D CLL_A0188 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CLL_A0439 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CLL_A0162 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLL_A0168 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLL_A0165 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLL_A0426 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLL_A0433 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLL_A2795 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLL_A3512 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLL_A0429 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLL_A0425 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLL_A2050 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLL_A3507 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLL_A0432 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLL_A2048 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLL_A0012 tRNA-Met K14230 tRNA-Met; tRNA Met D CLL_A3407 tRNA-Met K14230 tRNA-Met; tRNA Met D CLL_A0164 tRNA-Met K14230 tRNA-Met; tRNA Met D CLL_A0167 tRNA-Met K14230 tRNA-Met; tRNA Met D CLL_A0163 tRNA-Met K14230 tRNA-Met; tRNA Met D CLL_A0166 tRNA-Met K14230 tRNA-Met; tRNA Met D CLL_A1082 tRNA-Met K14230 tRNA-Met; tRNA Met D CLL_A0192 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CLL_A3382 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CLL_A0420 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CLL_A0019 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLL_A0021 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLL_A0020 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLL_A0022 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLL_A3451 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLL_A0223 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CLL_A0510 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CLL_A0513 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CLL_A3568 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CLL_A3564 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CLL_A0534 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CLL_A0542 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CLL_A0508 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CLL_A0514 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CLL_A0511 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CLL_A0509 tRNA-Val K14237 tRNA-Val; tRNA Val D CLL_A3570 tRNA-Val K14237 tRNA-Val; tRNA Val D CLL_A3562 tRNA-Val K14237 tRNA-Val; tRNA Val D CLL_A3566 tRNA-Val K14237 tRNA-Val; tRNA Val D CLL_A0512 tRNA-Val K14237 tRNA-Val; tRNA Val D CLL_A2555 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D CLL_A0411 glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CLL_A0412 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CLL_A0410 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CLL_A1174 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CLL_A1751 dhha1 domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CLL_A1036 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CLL_A2506 aspS; aspartate--tRNA ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D CLL_A0142 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CLL_A0182 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CLL_A0348 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CLL_A0018 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CLL_A0218 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CLL_A0112 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CLL_A1216 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CLL_A2505 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CLL_A3149 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CLL_A0093 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CLL_A0178 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CLL_A2562 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CLL_A0217 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CLL_A1035 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CLL_A2473 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CLL_A2472 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CLL_A3166 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CLL_A1702 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CLL_A3171 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:cbk03060] D CLL_A0258 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D CLL_A0225 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D CLL_A3053 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D CLL_A1028 protein export protein SecD K12257 secDF; SecD/SecF fusion protein D CLL_A1026 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D CLL_A3602 putative sporulation protein/membrane protein insertase, OxaA family K03217 yidC; YidC/Oxa1 family membrane protein insertase D CLL_A0520 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CLL_A1245 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CLL_A3605 srpB; bacterial signal recognition particle RNA K01983 ffs; SRP RNA D CLL_A1243 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CLL_A3284 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CLL_A3285 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CLL_A2828 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CLL_A3505 putative membrane protein K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:cbk04122] D CLL_A1169 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CLL_A1171 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CLL_A1165 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CLL_A1164 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] C 03050 Proteasome C 03018 RNA degradation [PATH:cbk03018] D CLL_A3055 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CLL_A1279 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CLL_A3545 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D CLL_A3051 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CLL_A3470 ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CLL_A1340 dbpA; ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CLL_A1477 cold-shock deAd box protein a K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CLL_A1339 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CLL_A3093 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CLL_A2347 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CLL_A0477 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D CLL_A1288 conserved hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D CLL_A1179 RNA-metabolising metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D CLL_A1590 metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D CLL_A3337 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLL_A0891 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CLL_A0386 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CLL_A1816 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein B B 09124 Replication and repair C 03030 DNA replication [PATH:cbk03030] D CLL_A2019 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLL_A2570 exonuclease, RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLL_A3338 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CLL_A1268 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D CLL_A3447 dnaX; DNA polymerase III, gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CLL_A0200 DNA polymerase III subunits gamma and tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CLL_A0882 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CLL_A0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CLL_A3580 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CLL_A0928 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CLL_A0913 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CLL_A3586 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CLL_A2769 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CLL_A3368 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D CLL_A2275 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D CLL_A1933 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D CLL_0019 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CLL_A1252 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CLL_A2645 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CLL_A0409 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:cbk03410] D CLL_A0379 8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D CLL_A3076 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CLL_A3379 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CLL_A0132 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D CLL_A1732 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CLL_A0712 AP endonuclease, family 2 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CLL_A2645 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CLL_A0784 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CLL_A0409 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:cbk03420] D CLL_A0152 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CLL_A3348 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D CLL_A3349 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D CLL_A3344 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D CLL_A0408 helicase, UvrD/Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CLL_A3281 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CLL_A2877 helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CLL_A2851 putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CLL_A2645 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CLL_A0409 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:cbk03430] D CLL_A1823 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D CLL_A2463 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D CLL_A1818 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D CLL_A0606 DNA mismatch repair enzyme MutH K03573 mutH; DNA mismatch repair protein MutH D CLL_A0408 helicase, UvrD/Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CLL_A3281 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CLL_A2877 helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CLL_A2851 putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CLL_A2404 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CLL_A2403 conserved domain protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CLL_A0784 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CLL_A3586 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CLL_A2769 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CLL_A3368 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D CLL_A2275 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D CLL_A1933 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D CLL_0019 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CLL_A3338 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CLL_A1268 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D CLL_A0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CLL_A3447 dnaX; DNA polymerase III, gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CLL_A0882 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CLL_A0200 DNA polymerase III subunits gamma and tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CLL_A2019 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLL_A2570 exonuclease, RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLL_A0409 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:cbk03440] D CLL_A0784 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CLL_A3586 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CLL_A2769 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CLL_A3368 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D CLL_A2275 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D CLL_A1933 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D CLL_0019 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CLL_A0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D CLL_A0907 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CLL_A3445 recR; recombination protein RecR K06187 recR; recombination protein RecR D CLL_A1287 recA; protein RecA K03553 recA; recombination protein RecA D CLL_A2645 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CLL_A1022 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CLL_A1023 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CLL_A1228 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CLL_A0516 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CLL_A3338 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CLL_A1268 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D CLL_A0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CLL_A3447 dnaX; DNA polymerase III, gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CLL_A0882 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CLL_A0200 DNA polymerase III subunits gamma and tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CLL_A2019 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLL_A2570 exonuclease, RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLL_A1214 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:cbk02010] D CLL_A1389 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D CLL_A3045 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D CLL_A1390 putative membrane protein K02018 modB; molybdate transport system permease protein D CLL_A1391 spermidine/putrescine import ATP-binding protein PotA K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D CLL_A1133 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D CLL_A0384 ABC transporter, substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D CLL_A0993 potD; spermidine/putrescine-binding periplasmic protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein D CLL_A0994 spermidine/putrescine transport system permease protein PotC K11070 potC; spermidine/putrescine transport system permease protein D CLL_A0995 potB; spermidine/putrescine ABC transporter, permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein D CLL_A0996 spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D CLL_A2925 glycine betaine/carnitine/choline transport system permease protein opucb K05845 opuC; osmoprotectant transport system substrate-binding protein D CLL_A2926 glycine betaine/L-proline ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CLL_A1424 glycine betaine/carnitine/choline transport ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CLL_A0973 multiple sugar-binding transport ATP-binding protein MsmK K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CLL_A2023 putative bacterial extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D CLL_A2025 maltose:maltodextrin transport system permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D CLL_A2024 maltose:maltodextrin transport system permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D CLL_A0136 sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D CLL_A0137 ABC-type sugar transport system, permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D CLL_A0138 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D CLL_A2974 lipoprotein, bmp family K07335 bmpA; basic membrane protein A and related proteins D CLL_A2972 sugar ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein D CLL_A2971 sugar ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein D CLL_A2973 sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D CLL_A1531 D-ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein D CLL_A1530 ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein D CLL_A1529 ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CLL_A1528 high affinity ribose transport protein RbsD K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D CLL_A2524 D-galactose-binding periplasmic protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D CLL_A2600 D-galactose-binding periplasmic protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D CLL_A1197 periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D CLL_A1198 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein D CLL_A1199 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D CLL_A1200 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CLL_A3280 amino acid ABC transporter K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D CLL_A3279 amino acid ABC transporter, amino acid-binding/permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein D CLL_A3278 glutamine transport ATP-binding protein GlnQ K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D CLL_A0745 D-methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D CLL_A0744 D-methionine transport system permease protein MetI K02072 metI; D-methionine transport system permease protein D CLL_A0743 methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein D CLL_A2488 oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D CLL_A2494 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CLL_A0414 putative extracellular solute-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CLL_A2492 oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein D CLL_A2491 oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D CLL_A2490 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D CLL_A2489 oligopeptide transport ATP-binding protein AppF K10823 oppF; oligopeptide transport system ATP-binding protein D CLL_A0549 periplasmic solute binding protein family K09815 znuA; zinc transport system substrate-binding protein D CLL_A0772 putative metal ion ABC transporter, permease protein K09816 znuB; zinc transport system permease protein D CLL_A0773 putative metal ion ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CLL_A0655 cobalt/cobalamin transport protein CbiN K02009 cbiN; cobalt/nickel transport protein D CLL_A2030 cobalamin K02007 cbiM; cobalt/nickel transport system permease protein D CLL_A0654 cbiM; cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D CLL_A2029 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D CLL_A0652 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D CLL_A2028 cobalt import ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein D CLL_A0653 cobalt import ATP-binding protein CbiO 2 K02006 cbiO; cobalt/nickel transport system ATP-binding protein D CLL_A2836 BioY protein K03523 bioY; biotin transport system substrate-specific component D CLL_A0720 BioY family protein K03523 bioY; biotin transport system substrate-specific component D CLL_A0271 cobalt transport permease, CbiQ family K16785 ecfT; energy-coupling factor transport system permease protein D CLL_A0269 cobalt import ATP-binding protein CbiO 3 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CLL_A0270 cobalt import ATP-binding protein CbiO 2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CLL_A3248 rfbA; O-antigen export system ATP-binding protein RfbA K09692 tagG; teichoic acid transport system permease protein D CLL_A3247 rfbB; O-antigen export system ATP-binding protein RfbB K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4] D CLL_A1121 ABC transporter, permease K11632 bceB; bacitracin transport system permease protein D CLL_A1122 bacitracin export ATP-binding protein BceA K11631 bceA; bacitracin transport system ATP-binding protein D CLL_A2210 putative lantibiotic ABC transporter, permease protein K20491 nisE; lantibiotic transport system permease protein D CLL_A2209 putative lantibiotic ABC transporter, permease protein K20492 nisG; lantibiotic transport system permease protein D CLL_A2211 antibiotic ABC transporter, ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein D CLL_A3096 ABC-type antimicrobial peptide transport system, permease component K19084 braE; bacitracin transport system permease protein D CLL_A3097 bacitracin export ATP-binding protein BceA K19083 braD; bacitracin transport system ATP-binding protein D CLL_A3352 efflux ABC transporter, permease protein, FtsX family K09811 ftsX; cell division transport system permease protein D CLL_A3353 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CLL_A1674 putative membrane protein K16919 ytrC_D; acetoin utilization transport system permease protein D CLL_A1673 ABC transporter, ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein D CLL_A0724 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D CLL_A2953 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D CLL_A0725 lipid A export ATP-binding/permease protein MsbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D CLL_A2952 lipid A export ATP-binding/permease protein MsbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D CLL_A2014 ABC transporter, ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:cbk02060] D CLL_A0286 ptsP; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CLL_A1290 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr D CLL_A3423 PTS system, glucose-like IIB component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D CLL_A3422 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CLL_A0718 nagE; pts system, N-acetylglucosamine-specific iibc component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D CLL_A0331 pts system, iibc component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208] D CLL_A3060 phosphotransferase system domain protein K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D CLL_A3458 pts system, sucrose-specific iibc component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D CLL_A1518 PTS system, beta-glucoside-specific IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CLL_A1821 treP; pts system, trehalose-specific iibc component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D CLL_A1500 PTS system, lactose/cellobiose-specific family, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CLL_A2093 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CLL_A2096 PTS system, diacetylchitobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CLL_A1499 PTS system, lactose/cellobiose-specific family, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CLL_A1503 PTS system, lactose/cellobiose family IIC component K02761 celB; cellobiose PTS system EIIC component D CLL_A2095 PTS system, lactose/cellobiose family IIC component K02761 celB; cellobiose PTS system EIIC component D CLL_A3360 PTS system fructose IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D CLL_A1373 PTS system, mannose/fructose/sorbose family, IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D CLL_A1374 PTS system sorbose-specific iic component K02795 manY; mannose PTS system EIIC component D CLL_A1375 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component D CLL_A3357 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component D CLL_A3359 PTS system sorbose subfamily IIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206] D CLL_A3128 PTS system fructose IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D CLL_A3133 PTS system, mannose/fructose/sorbose family, IIB component K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D CLL_A3132 PTS system sorbose-specific iic component K02746 agaW; N-acetylgalactosamine PTS system EIIC component D CLL_A3131 PTS system mannose/fructose/sorbose family IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component D CLL_A3358 PTS system, IIc component K17466 dgaC; D-glucosaminate PTS system EIIC component D CLL_A0400 PTS system, glucitol/sorbitol-specific, IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D CLL_A0397 PTS system, glucitol/sorbitol-specific, IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component D CLL_A3266 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CLL_A3532 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CLL_A3531 PTS sysytem, mannitol-specific enzyme II, B component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CLL_A3264 putative PTS system, L-Ascorbate family, IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CLL_A3265 ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component D CLL_A3530 ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component D CLL_A2296 PTS system, fructose-specific component family K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CLL_A2126 PTS system, fructose-specific component family K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CLL_A2297 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:cbk03070] D CLL_A1028 protein export protein SecD K12257 secDF; SecD/SecF fusion protein D CLL_A0225 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D CLL_A3053 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D CLL_A0258 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D CLL_A1026 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D CLL_A3602 putative sporulation protein/membrane protein insertase, OxaA family K03217 yidC; YidC/Oxa1 family membrane protein insertase D CLL_A0520 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CLL_A1243 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CLL_A1245 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:cbk02020] D CLL_A1196 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CLL_A2639 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CLL_A1195 alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D CLL_A0381 alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D CLL_A1505 alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D CLL_A1130 phoP; alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D CLL_A3016 response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D CLL_A1197 periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D CLL_A0456 peptidase, S1B family K04771 degP; serine protease Do [EC:3.4.21.107] D CLL_A3427 flagellin K02406 fliC; flagellin D CLL_A0818 flagellin K02406 fliC; flagellin D CLL_A0820 flagellin K02406 fliC; flagellin D CLL_A0836 flagellin K02406 fliC; flagellin D CLL_A0862 RNA polymerase sigma-D factor K02405 fliA; RNA polymerase sigma factor FliA D CLL_A3510 putative chemotaxis protein MotA K02556 motA; chemotaxis protein MotA D CLL_A0851 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA D CLL_A0981 sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D CLL_A0982 KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D CLL_A0978 kdpA; K+-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D CLL_A0979 kdpB; K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D CLL_A0980 kdpC; K+-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit D CLL_A2531 transcriptional regulatory protein ResD K07775 resD; two-component system, OmpR family, response regulator ResD D CLL_A3180 alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07668 vicR; two-component system, OmpR family, response regulator VicR D CLL_A0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CLL_A1122 bacitracin export ATP-binding protein BceA K11631 bceA; bacitracin transport system ATP-binding protein D CLL_A1121 ABC transporter, permease K11632 bceB; bacitracin transport system permease protein D CLL_A3096 ABC-type antimicrobial peptide transport system, permease component K19084 braE; bacitracin transport system permease protein D CLL_A3097 bacitracin export ATP-binding protein BceA K19083 braD; bacitracin transport system ATP-binding protein D CLL_A3098 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D CLL_A3099 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D CLL_A0687 dltA; D-alanine--poly(phosphoribitol) ligase, subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D CLL_A0688 protein DltB K03739 dltB; membrane protein involved in D-alanine export D CLL_A0689 dltC; D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D CLL_A0685 putative protein dltD K03740 dltD; D-alanine transfer protein D CLL_A0088 sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D CLL_A0087 DNA-binding response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR D CLL_A2532 two-component sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D CLL_A3542 sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D CLL_A1387 regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR D CLL_A3074 regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR D CLL_A1481 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D CLL_A2206 putative lantibiotic biosynthesis sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D CLL_A2207 putative lantibiotic biosynthesis regulatory protein K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR D CLL_A2211 antibiotic ABC transporter, ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein D CLL_A2210 putative lantibiotic ABC transporter, permease protein K20491 nisE; lantibiotic transport system permease protein D CLL_A2209 putative lantibiotic ABC transporter, permease protein K20492 nisG; lantibiotic transport system permease protein D CLL_A2395 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D CLL_A3577 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CLL_A0739 accessory gene regulator protein B K07813 agrB; accessory gene regulator B D CLL_A0742 two-component sensor histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D CLL_A1134 hexose phosphate transport protein K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT D CLL_A0811 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D CLL_A3428 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D CLL_A0073 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLL_A0698 CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D CLL_A2133 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D CLL_A2132 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D CLL_A0699 CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D CLL_A0490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLL_A3068 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D CLL_A3300 putative type IV pilin K02650 pilA; type IV pilus assembly protein PilA D CLL_A2008 hupS; [Ni/Fe] hydrogenase, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D CLL_A2007 hupL; [Ni/Fe] hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D CLL_A0799 cheR; chemotaxis protein methyltransferase, CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CLL_A0061 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D CLL_A1067 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A0667 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A1855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A2652 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A2195 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A2996 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D CLL_A1972 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D CLL_A3150 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A3212 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A3277 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A1019 HAMP/methyl-accepting chemotaxis signalling domain protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A0803 chemotaxis signal transduction protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CLL_A0796 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CLL_A0800 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CLL_A0802 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CLL_A0798 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CLL_A1563 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D CLL_A0705 CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CLL_A3043 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CLL_A2106 DNA-binding response regulator, AraC family K07720 yesN; two-component system, response regulator YesN D CLL_A1842 transcriptional regulatory protein K07720 yesN; two-component system, response regulator YesN D CLL_A0489 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CLL_A0806 negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:cbk02024] D CLL_A3319 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D CLL_A2855 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D CLL_A1816 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D CLL_A0982 KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D CLL_A0705 CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CLL_A3043 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CLL_A1295 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CLL_A3555 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CLL_A1558 hypothetical Membrane Spanning Protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CLL_A0739 accessory gene regulator protein B K07813 agrB; accessory gene regulator B D CLL_A0742 two-component sensor histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D CLL_A2808 tetanolysin O K11031 slo; thiol-activated cytolysin D CLL_A0088 sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D CLL_A0087 DNA-binding response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR D CLL_A2488 oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D CLL_A2494 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CLL_A0414 putative extracellular solute-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CLL_A2492 oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein D CLL_A2491 oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D CLL_A2490 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D CLL_A2489 oligopeptide transport ATP-binding protein AppF K10823 oppF; oligopeptide transport system ATP-binding protein D CLL_A3602 putative sporulation protein/membrane protein insertase, OxaA family K03217 yidC; YidC/Oxa1 family membrane protein insertase D CLL_A1028 protein export protein SecD K12257 secDF; SecD/SecF fusion protein D CLL_A0225 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D CLL_A3053 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D CLL_A0258 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D CLL_A1026 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D CLL_A0520 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CLL_A1243 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CLL_A1245 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CLL_A2395 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D CLL_A2118 phospholipase C zinc-binding K01114 plc; phospholipase C [EC:3.1.4.3] D CLL_A2206 putative lantibiotic biosynthesis sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D CLL_A2207 putative lantibiotic biosynthesis regulatory protein K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR D CLL_A2211 antibiotic ABC transporter, ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein D CLL_A2210 putative lantibiotic ABC transporter, permease protein K20491 nisE; lantibiotic transport system permease protein D CLL_A2209 putative lantibiotic ABC transporter, permease protein K20492 nisG; lantibiotic transport system permease protein C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:cbk02030] D CLL_A0061 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D CLL_A1067 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A0667 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A1855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A2652 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A2195 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A2996 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D CLL_A1972 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D CLL_A3150 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A3212 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A3277 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A1019 HAMP/methyl-accepting chemotaxis signalling domain protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A1531 D-ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein D CLL_A2524 D-galactose-binding periplasmic protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D CLL_A2600 D-galactose-binding periplasmic protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D CLL_A0800 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CLL_A0803 chemotaxis signal transduction protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CLL_A0796 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CLL_A0802 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CLL_A0801 cheC; chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC D CLL_A0798 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CLL_A1563 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D CLL_A0797 chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D CLL_A0799 cheR; chemotaxis protein methyltransferase, CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CLL_A0841 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D CLL_A0804 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D CLL_A0805 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CLL_A3510 putative chemotaxis protein MotA K02556 motA; chemotaxis protein MotA D CLL_A0851 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA D CLL_A0852 motB; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB D CLL_A3509 putative chemotaxis MotB protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:cbk02040] D CLL_A0839 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D CLL_A0840 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D CLL_A0841 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D CLL_A0842 flagellar assembly protein K02411 fliH; flagellar assembly protein FliH D CLL_A0843 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CLL_A0844 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D CLL_A0845 putative flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D CLL_A0853 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D CLL_A1861 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D CLL_A0804 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D CLL_A0805 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CLL_A0854 putative flagellar biosynthesis protein K02418 fliO; flagellar protein FliO/FliZ D CLL_A0855 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D CLL_A0856 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D CLL_A0858 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CLL_A0857 flagellar biosynthetic protein FliR/FlhB K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB D CLL_A0837 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D CLL_A0838 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D CLL_A0846 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D CLL_A0848 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D CLL_A0849 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D CLL_A0865 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF D CLL_A0866 flagellar hook-basal body complex protein FlhP K02392 flgG; flagellar basal-body rod protein FlgG D CLL_A0808 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D CLL_A0809 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D CLL_A3427 flagellin K02406 fliC; flagellin D CLL_A0818 flagellin K02406 fliC; flagellin D CLL_A0820 flagellin K02406 fliC; flagellin D CLL_A0836 flagellin K02406 fliC; flagellin D CLL_A0815 flagellar cap protein FliD K02407 fliD; flagellar hook-associated protein 2 D CLL_A0814 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D CLL_A3510 putative chemotaxis protein MotA K02556 motA; chemotaxis protein MotA D CLL_A0851 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA D CLL_A0852 motB; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB D CLL_A3509 putative chemotaxis MotB protein K02557 motB; chemotaxis protein MotB D CLL_A0806 negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D CLL_A0914 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D CLL_A0047 RNA polymerase sigma-F factor K03086 rpoD; RNA polymerase primary sigma factor D CLL_A3068 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D CLL_A0862 RNA polymerase sigma-D factor K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CLL_A3055 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D CLL_A2853 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:cbk01501] D CLL_A2488 oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D CLL_A2494 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CLL_A0414 putative extracellular solute-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CLL_A2492 oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein D CLL_A2491 oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D CLL_A2490 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D CLL_A2489 oligopeptide transport ATP-binding protein AppF K10823 oppF; oligopeptide transport system ATP-binding protein D CLL_A1970 putative beta-lactamase regulatory protein 1 K02172 blaR1; bla regulator protein blaR1 D CLL_A2154 peptidase, M56 family protein K02172 blaR1; bla regulator protein blaR1 D CLL_A0391 methicillin resistance protein MecR1 K02172 blaR1; bla regulator protein blaR1 D CLL_A2155 penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D CLL_A1971 penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D CLL_A2831 conserved hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6] D CLL_A1001 membrane carboxypeptidase MrcB K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CLL_A0566 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:cbk01502] D CLL_A2532 two-component sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D CLL_A3542 sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D CLL_A1387 regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR D CLL_A3074 regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR D CLL_A3075 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CLL_A1573 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CLL_A2444 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CLL_A2443 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CLL_A0788 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CLL_A1481 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cbk01503] D CLL_A0276 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLL_A3204 surface protein PspC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLL_A0613 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLL_A3205 surface protein PspC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLL_A0456 peptidase, S1B family K04771 degP; serine protease Do [EC:3.4.21.107] D CLL_A0687 dltA; D-alanine--poly(phosphoribitol) ligase, subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D CLL_A0688 protein DltB K03739 dltB; membrane protein involved in D-alanine export D CLL_A0689 dltC; D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D CLL_A0685 putative protein dltD K03740 dltD; D-alanine transfer protein B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:cbk01000] C 01001 Protein kinases [BR:cbk01001] D CLL_A1221 serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CLL_A1196 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CLL_A2639 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CLL_A0981 sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D CLL_A3098 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D CLL_A0088 sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D CLL_A2532 two-component sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D CLL_A3542 sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D CLL_A2206 putative lantibiotic biosynthesis sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D CLL_A0742 two-component sensor histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D CLL_A1843 two-component sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D CLL_A0800 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:cbk01009] D CLL_A3337 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLL_A2988 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D CLL_A1220 protein phosphatase PrpC K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D CLL_A1604 putative stage II sporulation protein E K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:cbk01002] D CLL_A3505 putative membrane protein K03101 lspA; signal peptidase II [EC:3.4.23.36] D CLL_A3303 leader peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CLL_A0884 gpr; GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78] D CLL_A2006 hydrogenase maturation protease superfamily K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D CLL_A1189 spoIIGA; sigma-E processing peptidase spoiiga K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-] D CLL_A1534 pcp; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D CLL_A0389 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CLL_0011 lipoprotein, nlpC/p60 family K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CLL_A3376 SagA protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CLL_A2215 putative exported peptidoglycan lytic protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CLL_A2231 surface protective antigen SpaB K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CLL_A1901 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CLL_A1105 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CLL_A1048 gltA; glutamate synthase, NADPH, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CLL_A0338 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CLL_A1395 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CLL_A2544 conserved domain protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CLL_A0783 protein ThiJ K03152 thiJ; protein deglycase [EC:3.5.1.124] D CLL_A2615 penicillin amidase K24041 yxeI; penicillin V amidase [EC:3.5.1.11] D CLL_A0739 accessory gene regulator protein B K07813 agrB; accessory gene regulator B D CLL_A3394 caax amino protease family protein K07052 K07052; CAAX protease family protein D CLL_A0776 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D CLL_A1484 colG; collagenase K01387 colA; microbial collagenase [EC:3.4.24.3] D CLL_A3235 neprilysin K07386 pepO; putative endopeptidase [EC:3.4.24.-] D CLL_A3035 endopeptidase O K07386 pepO; putative endopeptidase [EC:3.4.24.-] D CLL_A1481 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D CLL_A1086 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D CLL_A2228 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D CLL_A0558 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D CLL_A1341 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CLL_A0260 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CLL_A0103 Xaa-Pro aminopeptidase 1 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D CLL_0038 botA; bontoxilysin A K06011 boNT; botulinum neurotoxin [EC:3.4.24.69] D CLL_A2646 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D CLL_A0290 iadA; beta-aspartyl peptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-] D CLL_A3282 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CLL_A0172 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CLL_A1326 aminopeptidase, M42 family K01269 yhfE; aminopeptidase [EC:3.4.11.-] D CLL_A0574 sterol-regulatory element binding protein K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-] D CLL_A1266 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D CLL_A1970 putative beta-lactamase regulatory protein 1 K02172 blaR1; bla regulator protein blaR1 D CLL_A2154 peptidase, M56 family protein K02172 blaR1; bla regulator protein blaR1 D CLL_A0391 methicillin resistance protein MecR1 K02172 blaR1; bla regulator protein blaR1 D CLL_A0456 peptidase, S1B family K04771 degP; serine protease Do [EC:3.4.21.107] D CLL_A0078 CspB K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-] D CLL_A3557 subtilase family protein K17734 aprX; serine protease AprX [EC:3.4.21.-] D CLL_A2367 dacF; serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CLL_A2362 putative D-alanyl-D-alanine carboxypeptidase DacB K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CLL_A0587 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CLL_A2889 clpP; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CLL_A2258 peptidase S14, ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CLL_A3581 lonC; ATP-dependent protease, Lon family K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D CLL_A2887 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D CLL_A1814 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D CLL_A3284 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CLL_A3285 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CLL_A2828 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CLL_A3351 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D CLL_A0469 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6] D CLL_A0777 rhomboid family protein K19225 gluP; rhomboid protease GluP [EC:3.4.21.105] D CLL_A2396 spoIVB; stage IV sporulation protein B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116] D CLL_A2470 muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D CLL_A2507 LD-carboxypeptidase family protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D CLL_A0039 phage prohead protease, HK97 family K06904 GP4; Escherichia/Staphylococcus phage prohead protease D CLL_A0945 phage prohead protease, HK97 family K06904 GP4; Escherichia/Staphylococcus phage prohead protease D CLL_A2464 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-] D CLL_A1183 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D CLL_A0448 TldD/PmbA family protein K03592 pmbA; PmbA protein D CLL_A0447 TldD protein K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:cbk01003] D CLL_A0478 putative monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D CLL_A3416 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D CLL_A1001 membrane carboxypeptidase MrcB K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CLL_A2459 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D CLL_A2012 glycosyl transferase, group 36 family protein K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397] C 01005 Lipopolysaccharide biosynthesis proteins [BR:cbk01005] D CLL_A2455 O-antigen polymerase family K02847 waaL; O-antigen ligase [EC:2.4.99.26] D CLL_A2335 putative phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D CLL_A3242 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D CLL_A2508 bactoprenol glucosyl transferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cbk01011] D CLL_A0501 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CLL_A3552 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CLL_A3343 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CLL_A0145 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CLL_A0183 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CLL_A2445 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CLL_A3075 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CLL_A1573 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CLL_A0074 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CLL_A2470 muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D CLL_A2507 LD-carboxypeptidase family protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D CLL_A2443 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CLL_A0788 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CLL_A2582 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CLL_A3452 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CLL_A2458 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D CLL_A1001 membrane carboxypeptidase MrcB K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CLL_A0566 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CLL_A2446 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D CLL_A0618 penicillin-binding protein 3 K21467 pbpC; penicillin-binding protein 3 D CLL_A3345 penicillin-binding protein K05364 pbpA; penicillin-binding protein A D CLL_A2367 dacF; serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CLL_A2362 putative D-alanyl-D-alanine carboxypeptidase DacB K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CLL_A0587 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CLL_A1481 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D CLL_0011 lipoprotein, nlpC/p60 family K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CLL_A3376 SagA protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CLL_A2215 putative exported peptidoglycan lytic protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CLL_A2231 surface protective antigen SpaB K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CLL_A1901 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CLL_A2643 transglycosylase, SLT family K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D CLL_A0709 putative membrane protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D CLL_A1181 conserved hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D CLL_A0502 spoIID; stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D CLL_A0276 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLL_A3204 surface protein PspC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLL_A0613 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLL_A3205 surface protein PspC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:cbk01004] D CLL_A1149 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CLL_A1146 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CLL_A0673 putative 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CLL_A1151 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CLL_A1150 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLL_A1087 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLL_A1160 oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLL_A1153 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CLL_A1148 putative enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D CLL_A0451 lipolytic enzyme, G-D-S-L K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D CLL_A1114 CoA-binding domain protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D CLL_A1238 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CLL_A3077 plsD; glycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CLL_A3469 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:cbk01006] D CLL_A2402 putative geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CLL_A1262 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CLL_A2911 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CLL_A1817 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] C 01007 Amino acid related enzymes [BR:cbk01007] D CLL_A2555 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D CLL_A3166 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CLL_A1702 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CLL_A3171 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CLL_A0218 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CLL_A2562 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CLL_A0112 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CLL_A0093 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CLL_A2505 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CLL_A3149 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CLL_A0178 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CLL_A1036 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CLL_A0142 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CLL_A2506 aspS; aspartate--tRNA ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D CLL_A1035 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CLL_A0182 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CLL_A0018 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CLL_A0217 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CLL_A0348 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CLL_A1174 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CLL_A1751 dhha1 domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CLL_A2473 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CLL_A2472 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CLL_A0792 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CLL_A3292 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D CLL_A2976 aspartate aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-] D CLL_A2495 aminotransferase, classes I and II K10907 K10907; aminotransferase [EC:2.6.1.-] D CLL_A3119 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CLL_A2904 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CLL_A1088 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CLL_A0794 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CLL_A3243 lipopolysaccharide biosynthesis protein RffA K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:cbk00194] D CLL_A0499 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CLL_A0498 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CLL_A0497 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CLL_A0496 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CLL_A0495 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CLL_A0494 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CLL_A0493 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CLL_A0492 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:cbk03000] D CLL_A0608 DNA-cytosine methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CLL_A0703 transcriptional regulator, AraC/XylS family K13653 K13653; AraC family transcriptional regulator D CLL_A2017 LysR-family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D CLL_A0733 deoxyribose operon repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D CLL_A2298 lactose phosphotransferase system repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D CLL_A0504 spoIIID; stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D D CLL_A1299 DNA-binding protein IolR K06608 iolR; DeoR family transcriptional regulator, myo-inositol catabolism operon repressor D CLL_A0909 CBS domain protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator D CLL_A0094 catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CLL_A0134 transcriptional regulator, lacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CLL_A0975 HTH-type transcriptional regulator MalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CLL_A1532 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CLL_A2975 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CLL_A2060 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CLL_A3457 sucrose repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D CLL_A1819 treR; trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor D CLL_A0715 GntR-family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D CLL_A3130 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D CLL_A0360 transcriptional regulator, FadR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D CLL_A1672 transcriptional regulator YtrA K07979 ytrA; GntR family transcriptional regulator D CLL_A0051 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator D CLL_A2550 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D CLL_A3521 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D CLL_A1987 transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D CLL_A3526 MarR family regulatory protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D CLL_A1178 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D CLL_A0771 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D CLL_A2882 transcriptional regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D CLL_A0705 CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CLL_A3043 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CLL_A1976 putative transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D CLL_A2037 Crp-family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D CLL_A0732 cyclic nucleotide-binding domain protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D CLL_A1560 cyclic nucleotide-binding domain protein K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator D CLL_A1168 Rrf2 family protein K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D CLL_A2293 putative arsenical resistance operon repressor ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D CLL_A0370 cadmium efflux system accessory protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D CLL_A2190 transcription regulator, ArsR family K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons D CLL_A2661 lineage-specific thermal regulator protein K10947 K10947; PadR family transcriptional regulator D CLL_A1783 putative iron-dependent repressor K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D CLL_A2155 penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D CLL_A1971 penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D CLL_A2567 biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CLL_A0146 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D CLL_A1796 signal-transduction and transcriptional-control protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D CLL_A0663 aco operon expression regulatory protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D CLL_A0621 hypothetical sigma-54-dependent transcriptional regulator YgeV K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D CLL_A3216 signal-transduction and transcriptional-control protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D CLL_A2356 putative carbohydrate diacid regulator K02647 cdaR; carbohydrate diacid regulator D CLL_A0372 rex; redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D CLL_A1257 codY; GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor D CLL_A3323 transcription regulator, Cro/CI family -related protein K07727 K07727; putative transcriptional regulator D CLL_A2186 conserved domain protein K07729 K07729; putative transcriptional regulator D CLL_A2604 conserved domain protein K07729 K07729; putative transcriptional regulator D CLL_A2157 conserved domain protein K07729 K07729; putative transcriptional regulator D CLL_A0596 conserved domain protein K07729 K07729; putative transcriptional regulator D CLL_A1951 conserved domain protein K07729 K07729; putative transcriptional regulator D CLL_A1955 putative transcriptional regulator K07729 K07729; putative transcriptional regulator D CLL_A2598 conserved domain protein K07729 K07729; putative transcriptional regulator D CLL_0052 transcriptional regulator, Cro/CI family K07729 K07729; putative transcriptional regulator D CLL_A1520 transcription antiterminator LicT K03488 licT; beta-glucoside operon transcriptional antiterminator D CLL_A3424 transcriptional antiterminator, BglG family K03480 glcT; transcriptional antiterminator D CLL_A3533 putative phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K03483 mtlR; mannitol operon transcriptional activator D CLL_A0395 putative transcription antiterminator K03491 licR; probable licABCH operon transcriptional regulator D CLL_A3312 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D CLL_A1755 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D CLL_A1946 conserved domain protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D CLL_A0154 spoVT; stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D CLL_A3595 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CLL_A2276 ParB protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CLL_A3597 protein YyaA K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CLL_A1053 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D CLL_A0728 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D CLL_A1042 glycerol uptake operon antiterminator regulatory protein K02443 glpP; glycerol uptake operon antiterminator D CLL_A0350 glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator D CLL_A2398 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D CLL_A3335 ROK family protein K02565 nagC; N-acetylglucosamine repressor D CLL_A0889 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D CLL_A1417 TENA/THI-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D CLL_A0204 transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response D CLL_A3067 transcriptional regulator, SorC family K05311 cggR; central glycolytic genes regulator D CLL_A2431 pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CLL_A1193 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D CLL_A2449 mraZ; MraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:cbk03021] D CLL_A0267 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CLL_A0231 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CLL_A0232 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CLL_A1212 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CLL_A0914 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D CLL_A0047 RNA polymerase sigma-F factor K03086 rpoD; RNA polymerase primary sigma factor D CLL_A0545 RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CLL_A3006 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CLL_A3537 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CLL_A2668 specialized sigma subunit of RNA polymerase K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CLL_A2221 RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CLL_A1190 sigE; RNA polymerase sigma-E factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D CLL_A1191 sigG; RNA polymerase sigma-G factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D CLL_A1185 sigK; RNA polymerase sigma-K factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D CLL_A0876 sigF; RNA polymerase sigma-F factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D CLL_A0222 sigH; RNA polymerase sigma-H factor K27000 sigH; RNA polymerase sigma-H factor D CLL_A2320 sigma factor SgiI K03093 sigI; RNA polymerase sigma-I factor D CLL_A3068 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D CLL_A0862 RNA polymerase sigma-D factor K02405 fliA; RNA polymerase sigma factor FliA D CLL_A1270 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D CLL_A2406 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D CLL_A0226 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D CLL_A0177 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D CLL_A2119 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D CLL_A0477 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:cbk03019] D CLL_A0577 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D CLL_A1240 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CLL_A1179 RNA-metabolising metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D CLL_A1590 metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D CLL_A1288 conserved hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D CLL_A3051 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CLL_A0313 putative ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D CLL_A0711 HD hydrolase superfamily protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D CLL_A3545 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D CLL_A3470 ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CLL_A1340 dbpA; ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CLL_A1477 cold-shock deAd box protein a K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CLL_A1339 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CLL_A3093 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CLL_A2347 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CLL_A3055 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CLL_A1279 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CLL_A0477 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D CLL_A3337 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLL_A0891 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CLL_A0386 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CLL_A1816 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D CLL_A0811 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D CLL_A3428 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D CLL_A3342 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:cbk03011] D CLL_A0556 putative 30S ribosomal protein S1 homolog K02945 RP-S1; small subunit ribosomal protein S1 D CLL_A1805 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945 RP-S1; small subunit ribosomal protein S1 D CLL_A1258 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CLL_A0244 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CLL_A0266 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CLL_A0255 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CLL_A3587 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CLL_A0234 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CLL_A0252 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CLL_A0274 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CLL_A0237 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CLL_A0265 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CLL_A0233 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CLL_A0264 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CLL_A0251 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CLL_A1278 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CLL_A1246 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CLL_A0247 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CLL_A3585 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CLL_A0242 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CLL_A0883 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CLL_A0899 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CLL_A0228 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CLL_A0241 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CLL_A0238 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CLL_A0239 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CLL_A0250 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CLL_A0253 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CLL_A3582 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CLL_A0229 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CLL_A0227 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CLL_A0230 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CLL_A0273 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CLL_A0248 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CLL_A0257 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CLL_A0245 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CLL_A0268 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CLL_A0254 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CLL_A1250 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CLL_A2477 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CLL_A0578 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CLL_A0243 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CLL_A0240 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CLL_A0249 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CLL_A0580 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CLL_A1225 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CLL_A0246 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CLL_A0256 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CLL_A0479 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CLL_A1237 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CLL_A3604 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CLL_A2478 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CLL_A0263 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CLL_A2223 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CLL_A2224 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CLL_A3418 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3490 rrfH; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3499 rrfJ; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3408 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A0191 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3485 rrfG; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3481 rrfF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3508 rrfN; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3495 rrfI; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3513 rrfK; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A0011 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3383 rrfM; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A0008 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3488 rrsG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3502 rrsJ; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A0186 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3516 rrsK; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3411 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3484 rrsF; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3493 rrsH; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3498 rrsI; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3421 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A0438 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3409 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3419 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3482 rrlF; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3486 rrlG; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A0190 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A0010 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3514 rrlK; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A0441 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3496 rrlI; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3500 rrlJ; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3491 rrlH; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:cbk03009] D CLL_A1240 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CLL_A0906 era; GTP-binding protein Era K03595 era; GTPase D CLL_A0581 GTPase, Obg family K03979 obgE; GTPase [EC:3.6.5.-] D CLL_A1270 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D CLL_A2406 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D CLL_A0226 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D CLL_A0407 rluB; ribosomal large subunit pseudouridine synthase B K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D CLL_A3322 RNA pseudouridine synthase family protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D CLL_A0116 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CLL_A1218 sun; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CLL_A1229 rsmD; RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D CLL_A0896 conserved surface protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D CLL_A3598 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CLL_A2448 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CLL_A3374 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CLL_A1397 conserved hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D CLL_A2400 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D CLL_A0220 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D CLL_A3548 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D CLL_A0085 putative RNA methylase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D CLL_A1487 methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D CLL_A1219 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D CLL_A3330 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D CLL_A1677 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D CLL_A2873 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D CLL_A2432 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CLL_A0586 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CLL_A2511 ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D CLL_A0530 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D CLL_A3425 acetyltransferase, GNAT family K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D CLL_A1248 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D CLL_A1285 conserved hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D CLL_A0983 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D CLL_A0895 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D CLL_A0577 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D CLL_A1176 conserved hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D CLL_A0219 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D CLL_A3470 ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CLL_A1340 dbpA; ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CLL_A1477 cold-shock deAd box protein a K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CLL_A1339 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CLL_A1222 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CLL_A1203 engA; ribosome-associated GTPase EngA K03977 engA; GTPase D CLL_A1251 GTP-binding protein K14540 rbgA; ribosome biogenesis GTPase A D CLL_A1004 GTP binding protein K03665 hflX; GTPase D CLL_A0485 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CLL_A1031 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CLL_A1274 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D CLL_A1269 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP D CLL_A0003 yaaA; S4 domain protein YaaA K14761 rlbA; ribosome-associated protein D CLL_A0904 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor D CLL_A0582 CRS1/YhbY domain protein K07574 yhbY; RNA-binding protein D CLL_A0519 ribosome-associated protein Y K05808 hpf; ribosome hibernation promoting factor D CLL_A2452 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D CLL_A1236 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:cbk03016] D CLL_A1059 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D CLL_A3478 conserved hypothetical protein K00784 rnz; ribonuclease Z [EC:3.1.26.11] D CLL_A0313 putative ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D CLL_A1679 tRNA nucleotidyltransferase/poly(A) polymerase family protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D CLL_A0217 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CLL_A0093 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CLL_A3149 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CLL_A0112 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CLL_A2562 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CLL_A0178 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CLL_A1036 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CLL_A1174 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CLL_A1751 dhha1 domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CLL_A0142 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CLL_A0182 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CLL_A0348 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CLL_A0018 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CLL_A0218 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CLL_A2505 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CLL_A1035 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CLL_A2473 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CLL_A2472 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CLL_A3166 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CLL_A1702 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CLL_A3171 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CLL_A1032 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D CLL_A0898 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CLL_A0894 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D CLL_A0272 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CLL_A1276 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D CLL_A1169 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CLL_A0485 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CLL_A1817 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CLL_A3600 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D CLL_A3599 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CLL_A0646 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D CLL_A3603 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D CLL_A3606 bacterial RNase P class A K01978 rnpB; M1 RNA D CLL_A0417 rph; tRNA nucleotidyltransferase K00989 rph; ribonuclease PH [EC:2.7.7.56] D CLL_A2506 aspS; aspartate--tRNA ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D CLL_A2555 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D CLL_A1809 ybaK; YbaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D CLL_A3453 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D CLL_A0175 nifR; NifR3 family protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D CLL_A1808 miaB; tRNA-I(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D CLL_A0897 conserved hypothetical protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D CLL_A1249 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CLL_A0915 conserved hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D CLL_A3070 RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D CLL_A2474 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family D CLL_A1171 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CLL_A2234 ExsB family protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D CLL_A1024 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D CLL_A1980 ExsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CLL_A3078 iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D CLL_A1025 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D CLL_A0170 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D CLL_A0531 glycoprotease family protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D CLL_A0454 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D CLL_A0532 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D CLL_A3430 thiF domain protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D CLL_A1233 protein YlbM K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D CLL_A3051 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CLL_A1279 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:cbk03012] D CLL_A1273 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CLL_A2479 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CLL_A0764 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D CLL_A1372 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D CLL_A2984 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D CLL_A1259 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D CLL_A0224 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D CLL_A0236 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D CLL_A0235 fusA; translation elongation factor G K02355 fusA; elongation factor G D CLL_A3399 fusA; translation elongation factor G K02355 fusA; elongation factor G D CLL_A0483 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D CLL_A1261 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D CLL_A0482 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CLL_A0151 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CLL_A0262 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D CLL_A2417 efp; translation elongation factor P K02356 efp; elongation factor P D CLL_A0522 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D CLL_A3219 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:cbk03110] D CLL_A0752 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D CLL_A0207 negative regulator of genetic competence MecB/ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D CLL_A2888 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D CLL_A2988 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D CLL_A0891 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CLL_A1656 chaperone protein, Hsp70 family K04045 hscC; molecular chaperone HscC D CLL_A0386 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CLL_A0892 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CLL_A1601 chaperone protein DnaJ K05516 cbpA; curved DNA-binding protein D CLL_A2482 hslO; chaperonin HslO K04083 hslO; molecular chaperone Hsp33 D CLL_A0890 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE D CLL_A3471 hypothetical protein K13993 HSP20; HSP20 family protein D CLL_A0385 groS; chaperonin GroS K04078 groES; chaperonin GroES D CLL_A0456 peptidase, S1B family K04771 degP; serine protease Do [EC:3.4.21.107] D CLL_A3282 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CLL_A0172 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CLL_A0492 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CLL_A2005 hydrogenase expression/synthesis, HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D CLL_A1472 hydrogenase nickel incorporation protein K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D CLL_A1470 hypB; hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D CLL_A0078 CspB K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-] D CLL_A1445 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D CLL_A0075 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D CLL_A0668 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D CLL_A0153 putative peptidyl-prolyl cis-trans isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D CLL_A3378 foldase protein PrsA K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D CLL_A3209 trx; thioredoxin K03671 TXN; thioredoxin D CLL_A2807 trx; thioredoxin K03671 TXN; thioredoxin D CLL_A2536 trx; thioredoxin K03671 TXN; thioredoxin D CLL_A3522 thioredoxin K03671 TXN; thioredoxin D CLL_A0210 glutaredoxin-like protein, YruB-family K03676 grxC; glutaredoxin 3 C 04131 Membrane trafficking [BR:cbk04131] D CLL_A0992 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CLL_A3066 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CLL_A2841 pyruvate kinase family protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLL_A3336 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLL_A0557 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLL_A2988 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:cbk04121] C 03051 Proteasome [BR:cbk03051] D CLL_A2988 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:cbk03032] D CLL_A0608 DNA-cytosine methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CLL_A0157 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D CLL_A0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CLL_A3580 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CLL_A0928 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CLL_A3560 dnaC family protein K02315 dnaC; DNA replication protein DnaC D CLL_A0913 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CLL_A3586 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CLL_A2769 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CLL_A3368 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D CLL_A2275 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D CLL_A1933 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D CLL_0019 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CLL_A3338 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CLL_A1268 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D CLL_A0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CLL_A0882 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CLL_A0200 DNA polymerase III subunits gamma and tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CLL_A2019 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLL_A2570 exonuclease, RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLL_A3447 dnaX; DNA polymerase III, gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CLL_A1252 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CLL_A2645 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CLL_A0409 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CLL_A0007 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CLL_A0006 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CLL_A0782 DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D CLL_A0781 DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D CLL_A1256 topA; DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CLL_A2636 DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1] D CLL_A1688 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:cbk03036] D CLL_A0608 DNA-cytosine methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CLL_A1240 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CLL_A0157 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D CLL_A1601 chaperone protein DnaJ K05516 cbpA; curved DNA-binding protein D CLL_A0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CLL_A1816 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D CLL_A1242 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D CLL_A2366 ScpA/B protein K05896 scpA; segregation and condensation protein A D CLL_A2365 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B D CLL_A1187 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D CLL_A3353 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CLL_A1284 putative stage III sporulation protein E K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CLL_A2447 cell division protein FtsL homolog K03586 ftsL; cell division protein FtsL D CLL_A2441 putative cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D CLL_A2442 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW D CLL_A3352 efflux ABC transporter, permease protein, FtsX family K09811 ftsX; cell division transport system permease protein D CLL_A1188 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CLL_A0276 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLL_A3204 surface protein PspC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLL_A0613 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLL_A3205 surface protein PspC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLL_A0567 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D CLL_A0568 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D CLL_A0569 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D CLL_A2433 putative septum site-determining protein divIVA K04074 divIVA; cell division initiation protein D CLL_A2436 conserved hypothetical protein K09772 sepF; cell division inhibitor SepF D CLL_A0563 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D CLL_A0505 mbl; Mbl protein K03569 mreB; rod shape-determining protein MreB and related proteins D CLL_A0564 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D CLL_A0565 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D CLL_A0570 stage V sporulation protein E K05837 rodA; rod shape determining protein RodA D CLL_A3596 soj; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D CLL_A2277 Soj protein K03496 parA; chromosome partitioning protein D CLL_A3595 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CLL_A2276 ParB protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CLL_A3597 protein YyaA K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CLL_A0782 DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D CLL_A0781 DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D CLL_A3599 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CLL_A3598 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CLL_A2368 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D CLL_A2762 phage integrase K04763 xerD; integrase/recombinase XerD D CLL_A2394 DNA integration/recombination protein K04763 xerD; integrase/recombinase XerD D CLL_A1810 site-specific recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD D CLL_A0156 MazG family protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein D CLL_A2886 GTP-binding protein K03978 engB; GTP-binding protein D CLL_A3340 conserved hypothetical protein K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:cbk03400] D CLL_A1704 methylated-DNA-[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CLL_A3379 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CLL_A0132 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D CLL_A0379 8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D CLL_A3076 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CLL_A2065 mutT; MutT/NUDIX family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CLL_A1658 hydrolase, NUDIX family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CLL_A0763 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CLL_A1732 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CLL_A0712 AP endonuclease, family 2 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CLL_A0784 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CLL_A0409 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CLL_A2645 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CLL_A3348 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D CLL_A3349 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D CLL_A3344 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D CLL_A0408 helicase, UvrD/Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CLL_A3281 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CLL_A2877 helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CLL_A2851 putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CLL_A0231 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CLL_A0232 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CLL_A0267 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CLL_A1212 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CLL_A0152 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CLL_A1823 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D CLL_A2463 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D CLL_A1818 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D CLL_A0606 DNA mismatch repair enzyme MutH K03573 mutH; DNA mismatch repair protein MutH D CLL_A2404 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CLL_A2403 conserved domain protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CLL_A3338 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CLL_A1268 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D CLL_A0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CLL_A0882 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CLL_A0200 DNA polymerase III subunits gamma and tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CLL_A2019 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLL_A2570 exonuclease, RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLL_A3447 dnaX; DNA polymerase III, gamma and tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CLL_A3586 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CLL_A2769 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CLL_A3368 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D CLL_A2275 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D CLL_A1933 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D CLL_0019 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CLL_A0516 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CLL_A1287 recA; protein RecA K03553 recA; recombination protein RecA D CLL_A1022 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CLL_A1023 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CLL_A1214 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CLL_A2990 sbcC; exonuclease SbcCD, C subunit K03546 sbcC; DNA repair protein SbcC/Rad50 D CLL_A2780 conserved hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50 D CLL_A2991 sbcD; exonuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11 D CLL_A0547 Ser/Thr protein phosphatase family protein K03547 sbcD; DNA repair protein SbcD/Mre11 D CLL_A0212 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D CLL_A0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D CLL_A1228 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CLL_A0907 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CLL_A3445 recR; recombination protein RecR K06187 recR; recombination protein RecR D CLL_A2397 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D CLL_A0025 addA; ATP-dependent nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D CLL_A0024 addB; ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D CLL_A0007 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CLL_A0006 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CLL_A1256 topA; DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CLL_A0157 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D CLL_A3093 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CLL_A2347 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CLL_A1814 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D CLL_A2529 regulatory protein RecX K03565 recX; regulatory protein D CLL_A1693 putative exonuclease K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D CLL_A0284 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CLL_A0285 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CLL_A1275 DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:cbk03029] D CLL_A1273 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CLL_A2479 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CLL_A1259 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D CLL_A0224 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D CLL_A0236 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D CLL_A0235 fusA; translation elongation factor G K02355 fusA; elongation factor G D CLL_A3399 fusA; translation elongation factor G K02355 fusA; elongation factor G D CLL_A2225 ATP-dependent RNA helicase, superfamily II K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6] D CLL_A0906 era; GTP-binding protein Era K03595 era; GTPase D CLL_A3166 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CLL_A1702 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CLL_A3149 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CLL_A1036 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CLL_A0182 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CLL_A2562 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CLL_A0411 glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CLL_A0412 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CLL_A0410 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CLL_A3586 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CLL_A2769 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CLL_A3368 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D CLL_A2275 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D CLL_A1933 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein D CLL_0019 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D CLL_A0891 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CLL_A0890 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE D CLL_A0386 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CLL_A0385 groS; chaperonin GroS K04078 groES; chaperonin GroES D CLL_A0892 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CLL_A1169 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CLL_A3602 putative sporulation protein/membrane protein insertase, OxaA family K03217 yidC; YidC/Oxa1 family membrane protein insertase D CLL_A1593 hypothetical protein K21356 MFN1; mitofusin 1 [EC:3.6.5.-] D CLL_A2988 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:cbk02000] D CLL_A0724 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D CLL_A2953 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D CLL_A0725 lipid A export ATP-binding/permease protein MsbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D CLL_A2952 lipid A export ATP-binding/permease protein MsbA K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D CLL_A2538 lipid A export ATP-binding/permease protein MsbA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D CLL_A2014 ABC transporter, ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein D CLL_A1830 ABC transporter ATP-binding protein uup K15738 uup; ABC transport system ATP-binding/permease protein D CLL_A1389 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D CLL_A3045 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D CLL_A1390 putative membrane protein K02018 modB; molybdate transport system permease protein D CLL_A1391 spermidine/putrescine import ATP-binding protein PotA K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D CLL_A1133 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D CLL_A0384 ABC transporter, substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D CLL_A0993 potD; spermidine/putrescine-binding periplasmic protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein D CLL_A0994 spermidine/putrescine transport system permease protein PotC K11070 potC; spermidine/putrescine transport system permease protein D CLL_A0995 potB; spermidine/putrescine ABC transporter, permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein D CLL_A0996 spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D CLL_A2925 glycine betaine/carnitine/choline transport system permease protein opucb K05845 opuC; osmoprotectant transport system substrate-binding protein D CLL_A2926 glycine betaine/L-proline ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CLL_A1424 glycine betaine/carnitine/choline transport ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CLL_A2631 periplasmic binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D CLL_A2541 ABC transporter, substrate-binding lipoprotein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D CLL_A2633 ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein D CLL_A2540 ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein D CLL_A2632 aliphatic sulfonates import ATP-binding protein SsuB K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D CLL_A2539 aliphatic sulfonates import ATP-binding protein SsuB K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D CLL_A0973 multiple sugar-binding transport ATP-binding protein MsmK K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CLL_A2653 maltose-binding protein K25086 musE; maltose transport system substrate-binding protein D CLL_A2654 ABC transporter, permease protein K25087 musF; maltose transport system permease protein D CLL_A2655 ABC transporter, permease protein K25088 musG; maltose transport system permease protein D CLL_A2023 putative bacterial extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D CLL_A2025 maltose:maltodextrin transport system permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D CLL_A2024 maltose:maltodextrin transport system permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D CLL_A0136 sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D CLL_A0137 ABC-type sugar transport system, permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D CLL_A0138 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D CLL_A2524 D-galactose-binding periplasmic protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D CLL_A2600 D-galactose-binding periplasmic protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D CLL_A1531 D-ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein D CLL_A1530 ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein D CLL_A1529 ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CLL_A2974 lipoprotein, bmp family K07335 bmpA; basic membrane protein A and related proteins D CLL_A2972 sugar ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein D CLL_A2971 sugar ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein D CLL_A2973 sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D CLL_A2064 sugar ABC transporter periplasmic protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D CLL_A3192 bacterial extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D CLL_A0459 putative arabinose-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D CLL_A3191 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein D CLL_A2063 sugar ABC transporter permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein D CLL_A2062 sugar ABC transporter K02026 ABC.MS.P1; multiple sugar transport system permease protein D CLL_A3190 sugar transport system permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein D CLL_A1197 periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D CLL_A1198 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein D CLL_A1199 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D CLL_A1200 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CLL_A3280 amino acid ABC transporter K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D CLL_A3279 amino acid ABC transporter, amino acid-binding/permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein D CLL_A3278 glutamine transport ATP-binding protein GlnQ K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D CLL_A0745 D-methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D CLL_A0744 D-methionine transport system permease protein MetI K02072 metI; D-methionine transport system permease protein D CLL_A0743 methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein D CLL_A1097 amino acid ABC transporter, substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CLL_A1098 glutamine ABC transporter, permease/substrate-binding protein K02029 ABC.PA.P; polar amino acid transport system permease protein D CLL_A1099 ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D CLL_A2488 oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D CLL_A2494 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CLL_A0414 putative extracellular solute-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CLL_A2492 oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein D CLL_A2491 oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D CLL_A2490 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D CLL_A2489 oligopeptide transport ATP-binding protein AppF K10823 oppF; oligopeptide transport system ATP-binding protein D CLL_A2116 iron compound ABC transporter, iron compound-binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein D CLL_A2115 fhuB; ferrichrome transport system permease protein FhuB K25288 fhuB; ferric hydroxamate/heme transport system permease protein D CLL_A2114 fhuG; ferrichrome transport system permease protein FhuG K25289 fhuG; ferric hydroxamate/heme transport system permease protein D CLL_A2113 ferrichrome transport ATP-binding protein FhuC K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16] D CLL_A1473 putative iron chelate uptake ABC transporter, solute-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CLL_A0640 putative iron chelate uptake ABC transporter, solute-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CLL_A1474 Fe uptake system integral membrane protein K02015 ABC.FEV.P; iron complex transport system permease protein D CLL_A0641 iron chelate uptake ABC transporter, FeCT family, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D CLL_A1475 iron chelate uptake ABC transporter, FeCT family, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CLL_A0642 putative iron ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CLL_A1402 iron chelate uptake ABC transporter, FeCT family, solute-binding protein K25034 btuF; cobalamin transport system substrate-binding protein D CLL_A1403 iron(III) dicitrate transport system permease protein FecD K25027 btuC; cobalamin transport system permease protein D CLL_A1404 ferrichrome transport ATP-binding protein FhuC K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D CLL_A0549 periplasmic solute binding protein family K09815 znuA; zinc transport system substrate-binding protein D CLL_A0772 putative metal ion ABC transporter, permease protein K09816 znuB; zinc transport system permease protein D CLL_A0773 putative metal ion ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CLL_A0655 cobalt/cobalamin transport protein CbiN K02009 cbiN; cobalt/nickel transport protein D CLL_A2029 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D CLL_A0652 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D CLL_A2030 cobalamin K02007 cbiM; cobalt/nickel transport system permease protein D CLL_A0654 cbiM; cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D CLL_A2028 cobalt import ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein D CLL_A0653 cobalt import ATP-binding protein CbiO 2 K02006 cbiO; cobalt/nickel transport system ATP-binding protein D CLL_A2836 BioY protein K03523 bioY; biotin transport system substrate-specific component D CLL_A0720 BioY family protein K03523 bioY; biotin transport system substrate-specific component D CLL_A3020 integral membrane protein K16923 qrtT; energy-coupling factor transport system substrate-specific component D CLL_A3094 hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component D CLL_A0271 cobalt transport permease, CbiQ family K16785 ecfT; energy-coupling factor transport system permease protein D CLL_A0269 cobalt import ATP-binding protein CbiO 3 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CLL_A0270 cobalt import ATP-binding protein CbiO 2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CLL_A0533 putative ABC transporter substrate-binding lipoprotein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D CLL_A3248 rfbA; O-antigen export system ATP-binding protein RfbA K09692 tagG; teichoic acid transport system permease protein D CLL_A3247 rfbB; O-antigen export system ATP-binding protein RfbB K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4] D CLL_A2210 putative lantibiotic ABC transporter, permease protein K20491 nisE; lantibiotic transport system permease protein D CLL_A2209 putative lantibiotic ABC transporter, permease protein K20492 nisG; lantibiotic transport system permease protein D CLL_A2211 antibiotic ABC transporter, ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein D CLL_A1121 ABC transporter, permease K11632 bceB; bacitracin transport system permease protein D CLL_A1122 bacitracin export ATP-binding protein BceA K11631 bceA; bacitracin transport system ATP-binding protein D CLL_A3096 ABC-type antimicrobial peptide transport system, permease component K19084 braE; bacitracin transport system permease protein D CLL_A3097 bacitracin export ATP-binding protein BceA K19083 braD; bacitracin transport system ATP-binding protein D CLL_A1674 putative membrane protein K16919 ytrC_D; acetoin utilization transport system permease protein D CLL_A1673 ABC transporter, ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein D CLL_A3352 efflux ABC transporter, permease protein, FtsX family K09811 ftsX; cell division transport system permease protein D CLL_A3353 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CLL_A3441 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CLL_A2204 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CLL_A1408 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CLL_A0681 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CLL_A3306 ABC transporter domain protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CLL_A1775 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CLL_A1407 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CLL_A3442 putative bacitracin transport ATP-binding protein BcrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CLL_A2205 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CLL_A3013 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CLL_A1381 putative ABC transporter permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D CLL_A1863 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D CLL_A3462 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D CLL_A3519 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D CLL_A1123 putative ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D CLL_A1382 lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CLL_A1862 macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CLL_A2833 macrolide export ATP-binding/permease protein MacB 2 K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CLL_A3461 lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CLL_A3520 bacitracin export ATP-binding protein BceA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CLL_A1124 bacitracin export ATP-binding protein BceA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CLL_A1329 mate efflux family protein K26939 norM; MATE family, multidrug efflux pump D CLL_A2520 mate efflux family protein K26939 norM; MATE family, multidrug efflux pump D CLL_A2613 mate efflux family protein K26939 norM; MATE family, multidrug efflux pump D CLL_A1694 mate efflux family protein K26937 dinF; MATE family, multidrug efflux pump D CLL_A1668 putative integral membrane protein K26937 dinF; MATE family, multidrug efflux pump D CLL_A2301 mate efflux family protein K26937 dinF; MATE family, multidrug efflux pump D CLL_A2593 mate efflux family protein K26937 dinF; MATE family, multidrug efflux pump D CLL_A1698 mate efflux family protein K26937 dinF; MATE family, multidrug efflux pump D CLL_A1589 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump D CLL_A1094 Na+ driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump D CLL_A1488 mate efflux family protein K26937 dinF; MATE family, multidrug efflux pump D CLL_A0096 mate efflux family protein K26937 dinF; MATE family, multidrug efflux pump D CLL_A1412 mate efflux family protein K26937 dinF; MATE family, multidrug efflux pump D CLL_A1516 mate efflux family protein K26937 dinF; MATE family, multidrug efflux pump D CLL_A0340 mate efflux family protein K26937 dinF; MATE family, multidrug efflux pump D CLL_A1725 transporter, major facilitator family K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D CLL_A2055 transporter, major facilitator family K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D CLL_A1134 hexose phosphate transport protein K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT D CLL_A0351 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D CLL_A1420 transporter, major facilitator family K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein D CLL_A1421 transporter, major facilitator family K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein D CLL_A0693 lincomycin resistance protein LmrB K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D CLL_A1875 major facilitator superfamily MFS_1 K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D CLL_A0286 ptsP; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CLL_A1290 phosphocarrier, HPr family K02784 ptsH; phosphocarrier protein HPr D CLL_A3422 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CLL_A3423 PTS system, glucose-like IIB component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D CLL_A0718 nagE; pts system, N-acetylglucosamine-specific iibc component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D CLL_A0331 pts system, iibc component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208] D CLL_A3060 phosphotransferase system domain protein K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D CLL_A3458 pts system, sucrose-specific iibc component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D CLL_A1518 PTS system, beta-glucoside-specific IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CLL_A1821 treP; pts system, trehalose-specific iibc component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D CLL_A2296 PTS system, fructose-specific component family K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CLL_A2126 PTS system, fructose-specific component family K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CLL_A1500 PTS system, lactose/cellobiose-specific family, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CLL_A2093 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CLL_A2096 PTS system, diacetylchitobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CLL_A1499 PTS system, lactose/cellobiose-specific family, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CLL_A1503 PTS system, lactose/cellobiose family IIC component K02761 celB; cellobiose PTS system EIIC component D CLL_A2095 PTS system, lactose/cellobiose family IIC component K02761 celB; cellobiose PTS system EIIC component D CLL_A0400 PTS system, glucitol/sorbitol-specific, IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D CLL_A0397 PTS system, glucitol/sorbitol-specific, IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component D CLL_A1373 PTS system, mannose/fructose/sorbose family, IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D CLL_A3360 PTS system fructose IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D CLL_A1374 PTS system sorbose-specific iic component K02795 manY; mannose PTS system EIIC component D CLL_A1375 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component D CLL_A3357 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component D CLL_A3359 PTS system sorbose subfamily IIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206] D CLL_A3128 PTS system fructose IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D CLL_A3133 PTS system, mannose/fructose/sorbose family, IIB component K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D CLL_A3132 PTS system sorbose-specific iic component K02746 agaW; N-acetylgalactosamine PTS system EIIC component D CLL_A3131 PTS system mannose/fructose/sorbose family IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component D CLL_A3358 PTS system, IIc component K17466 dgaC; D-glucosaminate PTS system EIIC component D CLL_A3266 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CLL_A3532 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CLL_A3531 PTS sysytem, mannitol-specific enzyme II, B component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CLL_A3264 putative PTS system, L-Ascorbate family, IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CLL_A3265 ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component D CLL_A3530 ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component D CLL_A0111 dihydroxyacetone kinase, phosphotransfer subunit K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D CLL_A2097 glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator D CLL_A0108 glpF; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator D CLL_A3042 formate/nitrite family of transporter K02598 nirC; nitrite transporter D CLL_A0343 formate/nitrite transporter family protein K02598 nirC; nitrite transporter D CLL_A2031 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel D CLL_A2469 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel D CLL_A3589 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel D CLL_A1867 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D CLL_A3510 putative chemotaxis protein MotA K02556 motA; chemotaxis protein MotA D CLL_A0851 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA D CLL_A0852 motB; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB D CLL_A3509 putative chemotaxis MotB protein K02557 motB; chemotaxis protein MotB D CLL_A0194 magnesium and cobalt transporter K03284 corA; magnesium transporter D CLL_A3436 CBS/transporter domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CLL_A3454 putative membrane CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CLL_0033 ha70; hemagglutinin component HA70 K16626 ha-70; hemagglutinin components HA-22/23/53 D CLL_A2634 LrgA family protein K06518 cidA; holin-like protein D CLL_A1743 propanediol utilization protein PduA K27260 pduA; bacterial microcompartment shell protein D CLL_A1399 D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter D CLL_A3169 spore germination protein K06296 gerKB; spore germination protein KB D CLL_A0141 gufA; GufA protein K07238 TC.ZIP; zinc transporter, ZIP family D CLL_A2958 zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family D CLL_A3555 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CLL_A1558 hypothetical Membrane Spanning Protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CLL_A1311 gluconate transporter K06155 gntT; Gnt-I system high-affinity gluconate transporter D CLL_A2355 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D CLL_A1363 lctP; L-lactate permease K03303 lutP; lactate permease D CLL_A1074 K+-dependent Na+/Ca+ exchanger protein K07301 yrbG; cation:H+ antiporter D CLL_A1561 sodium/calcium exchanger protein K07301 yrbG; cation:H+ antiporter D CLL_A3148 putP; sodium/proline symporter K11928 putP; sodium/proline symporter D CLL_A0342 cell volume regulation protein A K11105 cvrA; potassium/hydrogen antiporter D CLL_A2192 transporter, monovalent cation:proton antiporter-2 (CPA2) family K26730 napA; Na+:H+ antiporter D CLL_A2476 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein D CLL_A1845 V-type sodium ATP synthase subunit J K03498 trkH; trk/ktr system potassium uptake protein D CLL_A2475 potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D CLL_A2948 pyrP; uracil permease K02824 uraA; uracil permease D CLL_A0639 xanthine permease K16169 pbuX; xanthine permease D CLL_A1208 inner membrane protein YicO K06901 pbuG; adenine/guanine/hypoxanthine permease D CLL_A1315 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease D CLL_A1469 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease D CLL_A1967 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease D CLL_A2616 inner membrane protein YicO K06901 pbuG; adenine/guanine/hypoxanthine permease D CLL_A1101 voltage gated chloride channel family K03281 clcA; chloride channel protein, CIC family D CLL_A2611 voltage-gated chloride channel K03281 clcA; chloride channel protein, CIC family D CLL_A0287 chrA; chromate transport protein K07240 chrA; chromate transporter D CLL_A0288 putative chromate transport protein K07240 chrA; chromate transporter D CLL_A3476 sulfate permease family protein K03321 TC.SULP; sulfate permease, SulP family D CLL_A0275 Na/Pi-cotransporter family protein/PhoU family protein K03324 yjbB; phosphate:Na+ symporter D CLL_A1058 Na/Pi-cotransporter family protein/PhoU family protein K03324 yjbB; phosphate:Na+ symporter D CLL_A2871 spoVB; stage V sporulation protein B K06409 spoVB; stage V sporulation protein B D CLL_A2872 polysaccharide biosynthesis family protein K06409 spoVB; stage V sporulation protein B D CLL_A0155 putative stage V sporulation protein B K06409 spoVB; stage V sporulation protein B D CLL_A2458 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D CLL_A0529 riboflavin transporter K23675 fmnP; riboflavin transporter D CLL_A2964 conserved hypothetical protein K23675 fmnP; riboflavin transporter D CLL_A1416 thiamine transporter protein K16789 thiT; thiamine transporter D CLL_A0123 probable proton-coupled thiamine transporter YuaJ K16789 thiT; thiamine transporter D CLL_A2852 putative membrane protein K16788 niaX; niacin transporter D CLL_A2442 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW D CLL_A3052 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D CLL_A2806 cytochrome C biogenesis protein transmembrane region family K06196 ccdA; cytochrome c-type biogenesis protein D CLL_A1782 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D CLL_A3029 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D CLL_A2558 feoA; ferrous ion transport protein A K04758 feoA; ferrous iron transport protein A D CLL_A3028 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D CLL_A2559 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D CLL_A1781 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D CLL_A2637 TspO/MBR family protein K05770 TSPO; translocator protein D CLL_A1825 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D CLL_A1827 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:cbk02044] D CLL_A3303 leader peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CLL_A3300 putative type IV pilin K02650 pilA; type IV pilus assembly protein PilA D CLL_A3302 type IV pilus assembly protein TapB K02652 pilB; type IV pilus assembly protein PilB D CLL_A3301 bacterial type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC D CLL_A3299 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D CLL_A3298 fimbrial assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN D CLL_A3297 conserved hypothetical protein K02664 pilO; type IV pilus assembly protein PilO D CLL_A1186 pilT; twitching motility protein PilT K02669 pilT; twitching motility protein PilT D CLL_A2435 yggt family protein K02221 yggT; YggT family protein D CLL_A0589 DNA-binding protein, ComEA family K02237 comEA; competence protein ComEA D CLL_A0488 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D CLL_A0881 putative competence protein K02238 comEC; competence protein ComEC D CLL_A1884 metallo beta-lactamase family protein K02238 comEC; competence protein ComEC D CLL_A0615 metallo beta-lactamase family protein K02238 comEC; competence protein ComEC D CLL_A2468 metallo-beta-lactamase family protein K02238 comEC; competence protein ComEC D CLL_A2554 metallo-beta-lactamase family protein K02238 comEC; competence protein ComEC D CLL_A1837 metallo-beta-lactamase family protein K02238 comEC; competence protein ComEC D CLL_A3260 surface protein PspC K02238 comEC; competence protein ComEC D CLL_A1680 conserved hypothetical protein K02241 comFB; competence protein ComFB D CLL_A0518 competence protein F K02242 comFC; competence protein ComFC D CLL_A0858 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CLL_A3164 flagella-associated protein K04061 flhB2; flagellar biosynthesis protein D CLL_A0840 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D CLL_A0842 flagellar assembly protein K02411 fliH; flagellar assembly protein FliH D CLL_A0843 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CLL_A0805 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CLL_A0854 putative flagellar biosynthesis protein K02418 fliO; flagellar protein FliO/FliZ D CLL_A0855 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D CLL_A0856 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D CLL_A0857 flagellar biosynthetic protein FliR/FlhB K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB D CLL_A0520 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CLL_A1028 protein export protein SecD K12257 secDF; SecD/SecF fusion protein D CLL_A0225 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D CLL_A3053 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D CLL_A0258 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D CLL_A1245 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CLL_A1243 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CLL_A1026 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D CLL_A3602 putative sporulation protein/membrane protein insertase, OxaA family K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:cbk02042] D CLL_0038 botA; bontoxilysin A K06011 boNT; botulinum neurotoxin [EC:3.4.24.69] D CLL_0037 ntnH; botulinum neurotoxin type B, nontoxic-nonhemagglutinin component, NTNH K16623 ntnH; botulinum neurotoxin type non-toxic component D CLL_0035 ha33; hemagglutinin component HA33 K16624 ha-33; main hemagglutinin component D CLL_0034 ha17; hemagglutinin component HA17 K16625 ha-17; hemagglutinin component HA-17 D CLL_0033 ha70; hemagglutinin component HA70 K16626 ha-70; hemagglutinin components HA-22/23/53 D CLL_A2808 tetanolysin O K11031 slo; thiol-activated cytolysin D CLL_A3436 CBS/transporter domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CLL_A3454 putative membrane CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CLL_A0056 channel protein, hemolysin III family K11068 hlyIII; hemolysin III D CLL_A2118 phospholipase C zinc-binding K01114 plc; phospholipase C [EC:3.1.4.3] D CLL_A1484 colG; collagenase K01387 colA; microbial collagenase [EC:3.4.24.3] C 02022 Two-component system [BR:cbk02022] D CLL_A1196 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CLL_A2639 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CLL_A1195 alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D CLL_A0381 alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D CLL_A1505 alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D CLL_A1130 phoP; alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D CLL_A3016 response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D CLL_A0981 sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D CLL_A0982 KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D CLL_A2531 transcriptional regulatory protein ResD K07775 resD; two-component system, OmpR family, response regulator ResD D CLL_A3180 alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07668 vicR; two-component system, OmpR family, response regulator VicR D CLL_A3098 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3] D CLL_A3099 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR D CLL_A0088 sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3] D CLL_A0087 DNA-binding response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR D CLL_A2532 two-component sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D CLL_A3542 sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D CLL_A1387 regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR D CLL_A3074 regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR D CLL_A2206 putative lantibiotic biosynthesis sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D CLL_A2207 putative lantibiotic biosynthesis regulatory protein K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR D CLL_A0150 two-component response regulator K02483 K02483; two-component system, OmpR family, response regulator D CLL_A2395 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D CLL_A0742 two-component sensor histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D CLL_A1843 two-component sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D CLL_A0800 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CLL_A0802 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CLL_A0798 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CLL_A1563 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D CLL_A2106 DNA-binding response regulator, AraC family K07720 yesN; two-component system, response regulator YesN D CLL_A1842 transcriptional regulatory protein K07720 yesN; two-component system, response regulator YesN C 02035 Bacterial motility proteins [BR:cbk02035] D CLL_A0800 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CLL_A0803 chemotaxis signal transduction protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CLL_A0796 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CLL_A0801 cheC; chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC D CLL_A0797 chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D CLL_A0799 cheR; chemotaxis protein methyltransferase, CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CLL_A0798 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CLL_A0802 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CLL_A1563 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D CLL_A0061 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D CLL_A1067 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A0667 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A1855 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A2652 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A2195 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A2996 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D CLL_A1972 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D CLL_A3150 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A3212 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A3277 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A1019 HAMP/methyl-accepting chemotaxis signalling domain protein K03406 mcp; methyl-accepting chemotaxis protein D CLL_A0842 flagellar assembly protein K02411 fliH; flagellar assembly protein FliH D CLL_A0843 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CLL_A0844 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D CLL_A0854 putative flagellar biosynthesis protein K02418 fliO; flagellar protein FliO/FliZ D CLL_A0855 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D CLL_A0856 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D CLL_A0857 flagellar biosynthetic protein FliR/FlhB K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB D CLL_A0858 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CLL_A0841 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D CLL_A0804 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D CLL_A0805 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CLL_A0840 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D CLL_A0853 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D CLL_A1861 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D CLL_A0839 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D CLL_A0845 putative flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D CLL_A0837 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D CLL_A0838 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D CLL_A0846 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D CLL_A0865 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF D CLL_A0866 flagellar hook-basal body complex protein FlhP K02392 flgG; flagellar basal-body rod protein FlgG D CLL_A0848 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D CLL_A0849 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D CLL_A0808 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D CLL_A0809 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D CLL_A0701 FliB family protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-] D CLL_A0392 FliB domain protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-] D CLL_A0834 putative FliB family protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-] D CLL_A2122 FliB family protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-] D CLL_A1787 FliB family protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-] D CLL_A3427 flagellin K02406 fliC; flagellin D CLL_A0818 flagellin K02406 fliC; flagellin D CLL_A0820 flagellin K02406 fliC; flagellin D CLL_A0836 flagellin K02406 fliC; flagellin D CLL_A0815 flagellar cap protein FliD K02407 fliD; flagellar hook-associated protein 2 D CLL_A0814 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D CLL_A0862 RNA polymerase sigma-D factor K02405 fliA; RNA polymerase sigma factor FliA D CLL_A3510 putative chemotaxis protein MotA K02556 motA; chemotaxis protein MotA D CLL_A0851 motA; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA D CLL_A0852 motB; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB D CLL_A3509 putative chemotaxis MotB protein K02557 motB; chemotaxis protein MotB D CLL_A0810 fliW; flagellar assembly factor FliW K13626 fliW; flagellar assembly factor FliW D CLL_A0806 negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D CLL_A0812 flaG family protein K06603 flaG; flagellar protein FlaG D CLL_A0850 conserved domain protein K02385 flbD; flagellar protein FlbD D CLL_A0859 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D CLL_A0860 flhG; flagellar biosynthesis protein FlhG K04562 flhG; flagellar biosynthesis protein FlhG D CLL_A1186 pilT; twitching motility protein PilT K02669 pilT; twitching motility protein PilT D CLL_A3300 putative type IV pilin K02650 pilA; type IV pilus assembly protein PilA D CLL_A3302 type IV pilus assembly protein TapB K02652 pilB; type IV pilus assembly protein PilB D CLL_A3301 bacterial type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC D CLL_A3303 leader peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CLL_A3297 conserved hypothetical protein K02664 pilO; type IV pilus assembly protein PilO D CLL_A3298 fimbrial assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN D CLL_A3299 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:cbk04812] D CLL_A0563 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D CLL_A0505 mbl; Mbl protein K03569 mreB; rod shape-determining protein MreB and related proteins D CLL_0047 putative ATPase K18640 parM; plasmid segregation protein ParM D CLL_A1188 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CLL_A1187 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D CLL_A0567 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D CLL_A0568 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D CLL_A0569 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D CLL_A3596 soj; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D CLL_A2277 Soj protein K03496 parA; chromosome partitioning protein D CLL_A3595 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CLL_A2276 ParB protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CLL_A3597 protein YyaA K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:cbk04147] D CLL_A2988 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D CLL_A3055 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CLL_A3066 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CLL_A3065 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CLL_A2841 pyruvate kinase family protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLL_A3336 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLL_A0557 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLL_A1086 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D CLL_A0386 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CLL_A0891 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D CLL_A0403 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CLL_A0388 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CLL_A0224 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D CLL_A0236 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D CLL_A0898 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CLL_A2569 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CLL_A3511 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CLL_A0490 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CLL_A0259 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CLL_A1030 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CLL_A3115 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CLL_A3114 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CLL_A0634 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D CLL_A3417 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CLL_A1043 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CLL_A0073 glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLL_A2905 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CLL_A3438 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CLL_A1108 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CLL_A3389 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLL_A1362 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D CLL_A0376 electron transfer flavoprotein, alpha subunit/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit D CLL_A3064 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:cbk02048] D CLL_A2083 type I site-specific restriction-modification system, R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D CLL_A2082 Sau1hsdS1 K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D CLL_A2081 hsdM; type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D CLL_A0608 DNA-cytosine methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CLL_A2263 Gp54 protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D CLL_A3362 endoribonuclease EndoA K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D CLL_A1188 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CLL_A0563 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D CLL_A0505 mbl; Mbl protein K03569 mreB; rod shape-determining protein MreB and related proteins D CLL_A0782 DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D CLL_A0781 DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D CLL_A1169 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:cbk04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides [BR:cbk04052] D CLL_A1660 nicotinamide phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] C 04515 Cell adhesion molecules C 04090 CD molecules [BR:cbk04090] C 01504 Antimicrobial resistance genes [BR:cbk01504] D CLL_A0989 spermine/spermidine acetyltransferase K18815 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82] D CLL_A1735 GTP-binding elongation factor, TetM/TetO family K18220 tetM; ribosomal protection tetracycline resistance protein D CLL_A2014 ABC transporter, ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein D CLL_A2128 chloramphenicol O-acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28] D CLL_A2166 chloramphenicol O-acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28] D CLL_A1970 putative beta-lactamase regulatory protein 1 K02172 blaR1; bla regulator protein blaR1 D CLL_A2154 peptidase, M56 family protein K02172 blaR1; bla regulator protein blaR1 D CLL_A0391 methicillin resistance protein MecR1 K02172 blaR1; bla regulator protein blaR1 D CLL_A2155 penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D CLL_A1971 penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D CLL_A2831 conserved hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6] D CLL_A2532 two-component sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D CLL_A3542 sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D CLL_A1481 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D CLL_A1387 regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR D CLL_A3074 regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR D CLL_A0687 dltA; D-alanine--poly(phosphoribitol) ligase, subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D CLL_A0688 protein DltB K03739 dltB; membrane protein involved in D-alanine export D CLL_A0689 dltC; D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D CLL_A0685 putative protein dltD K03740 dltD; D-alanine transfer protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cbk00537] D CLL_A1086 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:cbk03100] D CLL_A0013 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CLL_A3406 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CLL_A0187 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CLL_A0422 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLL_A2596 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLL_A2051 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLL_A2049 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLL_A0436 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLL_A0030 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLL_A3466 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLL_A0179 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CLL_A0181 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CLL_A0180 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CLL_A0442 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CLL_A3565 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CLL_A3569 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CLL_A3561 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CLL_A0193 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CLL_A1767 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CLL_A0424 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CLL_A0431 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CLL_A3563 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CLL_A3567 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CLL_A3571 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CLL_A2943 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CLL_A0421 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLL_A0428 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLL_A0427 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLL_A0434 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLL_A0435 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLL_A0423 tRNA-His K14226 tRNA-His; tRNA His D CLL_A0430 tRNA-His K14226 tRNA-His; tRNA His D CLL_A0188 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CLL_A0439 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CLL_A0162 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLL_A0168 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLL_A0165 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLL_A0426 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLL_A0433 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLL_A2795 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLL_A3512 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLL_A0429 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLL_A0425 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLL_A2050 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLL_A3507 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLL_A0432 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLL_A2048 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLL_A0012 tRNA-Met K14230 tRNA-Met; tRNA Met D CLL_A3407 tRNA-Met K14230 tRNA-Met; tRNA Met D CLL_A0164 tRNA-Met K14230 tRNA-Met; tRNA Met D CLL_A0167 tRNA-Met K14230 tRNA-Met; tRNA Met D CLL_A0163 tRNA-Met K14230 tRNA-Met; tRNA Met D CLL_A0166 tRNA-Met K14230 tRNA-Met; tRNA Met D CLL_A1082 tRNA-Met K14230 tRNA-Met; tRNA Met D CLL_A0192 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CLL_A3382 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CLL_A0420 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CLL_A0019 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLL_A0021 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLL_A0020 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLL_A0022 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLL_A3451 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLL_A0223 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CLL_A0510 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CLL_A0513 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CLL_A3568 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CLL_A3564 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CLL_A0534 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CLL_A0542 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CLL_A0508 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CLL_A0514 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CLL_A0511 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CLL_A0509 tRNA-Val K14237 tRNA-Val; tRNA Val D CLL_A3570 tRNA-Val K14237 tRNA-Val; tRNA Val D CLL_A3562 tRNA-Val K14237 tRNA-Val; tRNA Val D CLL_A3566 tRNA-Val K14237 tRNA-Val; tRNA Val D CLL_A0512 tRNA-Val K14237 tRNA-Val; tRNA Val D CLL_A0008 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3488 rrsG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3502 rrsJ; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A0186 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3516 rrsK; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3411 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3484 rrsF; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3493 rrsH; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3498 rrsI; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3421 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A0438 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLL_A3409 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3419 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3482 rrlF; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3486 rrlG; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A0190 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A0010 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3514 rrlK; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A0441 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3496 rrlI; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3500 rrlJ; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3491 rrlH; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLL_A3418 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3490 rrfH; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3499 rrfJ; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3408 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A0191 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3485 rrfG; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3481 rrfF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3508 rrfN; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3495 rrfI; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3513 rrfK; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A0011 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3383 rrfM; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLL_A3605 srpB; bacterial signal recognition particle RNA K01983 ffs; SRP RNA D CLL_A3606 bacterial RNase P class A K01978 rnpB; M1 RNA D CLL_A0690 ssrA; ssrA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CLL_A2112 2,5-diketo-d-gluconic acid reductase a K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D CLL_A0638 putative xanthine dehydrogenase, iron-sulfur binding subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D CLL_A3327 putative xanthine dehydrogenase, iron-sulfur binding subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D CLL_A1014 saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55] D CLL_A2201 FMN-dependent NADH-azoreductase family protein K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D CLL_A2270 cotJC protein K07217 ydbD; manganese catalase [EC:1.11.1.6] D CLL_A2751 cotJC protein K07217 ydbD; manganese catalase [EC:1.11.1.6] D CLL_A3314 redoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CLL_A2000 periplasmic [Fe] hydrogenase 1 K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3] D CLL_A0052 hydrogenase-1 K00532 E1.12.7.2; ferredoxin hydrogenase [EC:1.12.7.2] D CLL_A2041 oxidoreductase NAD-binding domain protein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D CLL_A3049 conserved electron-transfer protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CLL_A3214 conserved electron-transfer protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CLL_A0665 conserved electron-transfer protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CLL_A2292 arsenate reductase family protein K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D CLL_A0131 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D CLL_A2572 pflA; pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CLL_A1840 pyruvate formate-lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CLL_A1512 glycyl-radical enzyme activating family protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CLL_A0080 radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CLL_A1454 benzylsuccinate synthase activating enzyme K20037 cutD; choline trimethylamine-lyase activating enzyme [EC:1.97.1.-] D CLL_A2606 tehB; tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265] D CLL_A0826 putative O-methyltransferase K05303 K05303; O-methyltransferase [EC:2.1.1.-] D CLL_A2333 conserved hypothetical protein K05303 K05303; O-methyltransferase [EC:2.1.1.-] D CLL_A2430 methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D CLL_A1995 transferase, hexapeptide repeat family K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D CLL_A2165 maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D CLL_A2989 maa; maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D CLL_A2672 acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-] D CLL_A2061 conserved hypothetical protein K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340] D CLL_A2124 alpha amylase family protein K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352] D CLL_A2456 glycosyl transferase, group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D CLL_A0119 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D CLL_A2100 ATP:cob(I)alamin adenosyltransferase K27270 pduO; corrinoid adenosyltransferase [EC:2.5.1.-] D CLL_A1227 DAK2 domain protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D CLL_A3504 protein YqfL K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D CLL_A1963 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CLL_A0213 DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85] D CLL_A0293 conserved hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D CLL_A1414 conserved hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D CLL_A0875 spoIIAB; anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1] D CLL_A2846 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D CLL_A0206 putative ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D CLL_A2218 conserved hypothetical protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D CLL_A0169 spoIIE; stage II sporulation protein E K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16] D CLL_A2843 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D CLL_A2300 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D CLL_A3583 DHH family protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59] D CLL_A0903 putative hydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D CLL_A0113 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CLL_A0115 primase homolog K05985 rnmV; ribonuclease M5 [EC:3.1.26.8] D CLL_A2241 phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D CLL_A2709 cell wall binding repeat domain protein K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D CLL_A1888 phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D CLL_A2125 glycosyl hydrolase, family 38 K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-] D CLL_A2588 serine-type D-Ala-D-Ala carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D CLL_A3290 probable N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLL_A2185 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CLL_A2690 polypeptide deformylase family protein K01462 PDF; peptide deformylase [EC:3.5.1.88] D CLL_A1215 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CLL_A1525 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D CLL_A0443 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D CLL_A0760 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D CLL_A2498 chitooligosaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D CLL_A2587 peptidoglycan N-acetylglucosamine deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D CLL_A1554 GlcNAc-PI de-N-acetylase family K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-] D CLL_A2453 pdaA; delta-lactam-biosynthetic de-N-acetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-] D CLL_A0628 hydroxydechloroatrazine ethylaminohydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32] D CLL_A0677 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D CLL_A0630 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D CLL_A2513 uvdE; UV damage endonuclease UvdE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-] D CLL_A1723 4-hydroxyphenylacetate decarboxylase, catalytic subunit K18427 hpdB; 4-hydroxyphenylacetate decarboxylase large subunit [EC:4.1.1.83] D CLL_A1724 4-hydroxyphenylacetate decarboxylase, regulatory subunit K18428 hpdC; 4-hydroxyphenylacetate decarboxylase small subunit [EC:4.1.1.83] D CLL_A1824 splB; spore photoproduct lyase K03716 splB; spore photoproduct lyase [EC:4.1.99.14] D CLL_A2829 myosin-cross-reactive antigen K10254 ohyA; oleate hydratase [EC:4.2.1.53] D CLL_A1991 monoamine oxidase family protein, membrane associated K10254 ohyA; oleate hydratase [EC:4.2.1.53] D CLL_A3365 YjeF family protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D CLL_A0625 dpaL; diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15] D CLL_A1453 formate C-acetyltransferase K20038 cutC; choline trimethylamine-lyase [EC:4.3.99.4] D CLL_A0649 hgdC; 2-hydroxyglutaryl-CoA dehydratase component A K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9] D CLL_A0470 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D CLL_A1510 cation-transporting ATPase PacL K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D CLL_A0868 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D CLL_A0359 cation-transporting ATPase, P-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D CLL_A0880 ATPase family protein K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D CLL_A0371 cadA; cadmium-exporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D CLL_A1427 mgtA; magnesium-importing ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] D CLL_A3468 P-type ATPase - metal cation transport K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] D CLL_A1426 probable cation-transporting ATPase E K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] C 99981 Carbohydrate metabolism D CLL_A2237 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A D CLL_A2102 glycerol dehydratase reactivation factor large subunit K27264 pduG; propanediol dehydratase-reactivating factor large subunit D CLL_A2101 glycerol dehydratase reactivation factor, small subunit K27265 pduH; propanediol dehydratase-reactivating factor small subunit C 99982 Energy metabolism D CLL_A0122 conserved domain protein K05337 fer; ferredoxin D CLL_A1170 nifU; FeS cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins D CLL_A0707 flavodoxin K03839 fldA; flavodoxin I D CLL_A2039 flavodoxin K03839 fldA; flavodoxin I D CLL_A2809 4Fe-4S ferredoxin, iron-sulfur binding K02574 napH; ferredoxin-type protein NapH D CLL_A0375 electron transfer flavoprotein, beta subunit/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D CLL_A2895 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D CLL_A3069 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D CLL_A0126 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D CLL_A1119 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D CLL_A2968 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D CLL_A0458 ethanolamine transporter K04023 eutH; ethanolamine transporter D CLL_A1745 ethanolamine utilization protein EutJ K04024 eutJ; ethanolamine utilization protein EutJ D CLL_A1458 ethanolamine utilization protein EutJ K04024 eutJ; ethanolamine utilization protein EutJ D CLL_A1456 lysine-sensitive aspartokinase III K04029 eutP; ethanolamine utilization protein EutP D CLL_A1463 transcriptional regulator K04030 eutQ; ethanolamine utilization protein EutQ D CLL_A1455 bacterial microcompartment family protein K04031 eutS; ethanolamine utilization protein EutS D CLL_A2068 lactoylglutathione lyase K08234 yaeR; glyoxylase I family protein D CLL_A2437 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D CLL_A0291 spore-cortex-lytic enzyme, sleb K01449 cwlJ; cell wall hydrolase C 99987 Cofactor metabolism D CLL_A0101 ABC1 family protein kinase K03688 ubiB; ubiquinone biosynthesis protein D CLL_A3402 aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein D CLL_A1461 respiratory-chain NADH dehydrogenase domain, 51 kda subunit K27271 pduS; cobalamin reductase D CLL_A1749 ethanolamine utilization Fe-S center protein eut K27271 pduS; cobalamin reductase C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D CLL_A0396 glucitol operon activator protein K02466 gutM; glucitol operon activator protein D CLL_A1515 conserved domain protein K03704 cspA; cold shock protein D CLL_A0924 AntB K07741 antB; anti-repressor protein D CLL_A2788 antirepressor, phage associated K07741 antB; anti-repressor protein D CLL_A0526 tex domain protein K06959 tex; protein Tex D CLL_A1210 protein YlzA K09777 remA; extracellular matrix regulatory protein A D CLL_A0005 conserved hypothetical protein K24648 remB; extracellular matrix regulatory protein B C 99974 Translation D CLL_A0161 putative RNA-binding protein K07571 K07571; S1 RNA binding domain protein C 99975 Protein processing D CLL_A0205 McsA K19411 mcsA; protein arginine kinase activator D CLL_A2890 tig; trigger factor K03545 tig; trigger factor D CLL_A3050 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D CLL_A2003 hypC; hydrogenase assembly chaperone HypC/HupF K04653 hypC; hydrogenase expression/formation protein HypC D CLL_A2001 hydrogenase isoenzymes formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D CLL_A2002 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D CLL_A2004 hypF; [NiFe] hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D CLL_A1254 Mg chelatase family protein K07391 comM; magnesium chelatase family protein D CLL_A0644 selenium-dependent molybdenum hydroxylase system protein, YqeB family K07402 xdhC; xanthine dehydrogenase accessory factor D CLL_A0651 putative xanthine dehydrogenase accessory factor K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D CLL_A0747 ribonuclease HI K06993 K06993; ribonuclease H-related protein D CLL_A0562 DNA repair protein RadC K03630 radC; DNA repair protein RadC D CLL_A1253 endonuclease K07460 yraN; putative endonuclease D CLL_A0328 GIY-YIG domain protein K07461 K07461; putative endonuclease D CLL_A1255 dprA; DNA uptake protein K04096 smf; DNA processing protein D CLL_A2745 phage terminase, small subunit, PBSX family K07474 xtmA; phage terminase small subunit D CLL_A2262 conserved hypothetical protein K07474 xtmA; phage terminase small subunit D CLL_A2744 phage terminase, large subunit, pbsx family K06909 xtmB; phage terminase large subunit D CLL_A1167 ATPase, AAA family K07478 ycaJ; putative ATPase D CLL_A0034 hypothetical protein K06919 K06919; putative DNA primase/helicase C 99979 Viral proteins C 99998 Others D CLL_A0554 phage shock protein A K03969 pspA; phage shock protein A D CLL_A3446 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CLL_A2315 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D CLL_A0335 cation/multidrug efflux pump K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D CLL_A3538 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D CLL_A1307 Na+/myo-inositol cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family D CLL_A0055 sodium:neurotransmitter symporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CLL_A2980 sodium/proline symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CLL_A2912 sodium transporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CLL_A2941 sodium:neurotransmitter symporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CLL_A1000 amino acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CLL_A3173 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D CLL_A1077 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D CLL_A0731 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D CLL_A1581 nucleoside permease NupC K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D CLL_A2036 ric; iron-sulfur cluster repair di-iron protein K07322 ytfE; regulator of cell morphogenesis and NO signaling D CLL_A3443 bofA; sigma-K factor processing regulatory protein BofA K06317 bofA; inhibitor of the pro-sigma K processing machinery D CLL_A3037 cotJB; CotJB protein K06333 cotJB; spore coat protein JB D CLL_A3038 cotJC; CotJC protein K06334 cotJC; spore coat protein JC D CLL_A3601 R3H domain protein K06346 jag; spoIIIJ-associated protein D CLL_A0098 spmA; spore maturation protein A K06373 spmA; spore maturation protein A D CLL_A0099 spmB; spore maturation protein B K06374 spmB; spore maturation protein B D CLL_A0874 spoIIAA; anti-sigma F factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D CLL_A2369 spoIIM; stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M D CLL_A0885 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P D CLL_A0472 spoIIR; stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R D CLL_A2415 spoIIIAA; stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA D CLL_A2414 spoIIIAB; stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB D CLL_A2413 spoIIIAC; stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC D CLL_A2412 spoIIIAD; stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD D CLL_A2411 spoIIIAE; stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE D CLL_A2410 spoIIIAF; stage III sporulation protein AF K06395 spoIIIAF; stage III sporulation protein AF D CLL_A2409 spoIIIAG; stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG D CLL_A2408 putative stage III sporulation protein AH K06397 spoIIIAH; stage III sporulation protein AH D CLL_A1205 spoIVA; stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A D CLL_A2290 phage site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase D CLL_A0877 spoVAC; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC D CLL_A0878 spoVAD; stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD D CLL_A0879 spoVAE; stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE D CLL_A2545 stage V sporulation protein AF K06408 spoVAF; stage V sporulation protein AF D CLL_A0147 spoVG; stage V sporulation protein G K06412 spoVG; stage V sporulation protein G D CLL_A3090 stage V sporulation protein R K06415 spoVR; stage V sporulation protein R D CLL_A1289 spoVS; stage V sporulation protein S K06416 spoVS; stage V sporulation protein S D CLL_A0827 cytidylyltransferase K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF D CLL_A0544 conserved domain protein K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP) D CLL_A0753 conserved domain protein K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP) D CLL_A0466 sporulation peptidase YabG K06436 yabG; spore coat assemly protein D CLL_A0902 yqfD; sporulation protein YqfD K06438 yqfD; similar to stage IV sporulation protein D CLL_A3167 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC C 99993 Cell motility D CLL_A2674 TfoX C-domain superfamily K07343 tfoX; DNA transformation protein and related proteins C 99995 Signaling proteins D CLL_A1180 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein D CLL_A1717 ACT domain protein K07166 K07166; ACT domain-containing protein D CLL_A3092 non-specific serine/threonine protein kinase K07180 prkA; serine protein kinase C 99992 Structural proteins D CLL_A0966 autolytic lysozyme K07273 acm; lysozyme D CLL_A2348 lysozyme M1 K07273 acm; lysozyme D CLL_A3072 glycosyl hydrolase, family 25 K07273 acm; lysozyme D CLL_A2834 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D CLL_A1740 propanediol utilization protein PduB K27263 pduB; bacterial microcompartment shell protein D CLL_A1742 propanediol utilization protein PduA K27266 pduJ; bacterial microcompartment shell protein D CLL_A1741 putative propanediol utilization protein K27267 pduK; bacterial microcompartment shell protein D CLL_A1462 microcompartments protein K27272 pduT; bacterial microcompartment shell protein D CLL_A1750 ethanolamine utilization protein EutM K27272 pduT; bacterial microcompartment shell protein C 99994 Others D CLL_A1201 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D CLL_A3392 nitrogen-fixing NifU domain protein K02192 bfd; bacterioferritin-associated ferredoxin D CLL_A0719 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein D CLL_A1335 putative conserved hypothetical protein K07216 hr; hemerythrin D CLL_A1468 iron-binding protein, hemerythrin K07216 hr; hemerythrin D CLL_A1847 iron-binding protein, hemerythrin K07216 hr; hemerythrin D CLL_A3044 DNA binding domain, excisionase family K07219 K07219; putative molybdopterin biosynthesis protein D CLL_A2191 conserved membrane protein YvaZ K26996 sdpI; immunity protein, SdpI family B B 09194 Poorly characterized C 99996 General function prediction only D CLL_A0064 acetyltransferase K02348 elaA; ElaA protein D CLL_A0988 PHP domain protein K04477 ycdX; putative hydrolase D CLL_A3103 conserved protein YqhO K07001 K07001; NTE family protein D CLL_A3503 phospholipase, patatin family K07001 K07001; NTE family protein D CLL_A0825 putative hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D CLL_A1686 conserved hypothetical protein K07038 K07038; inner membrane protein D CLL_A3369 YihY family protein K07058 K07058; membrane protein D CLL_A2592 membrane protein, DedA family K03975 dedA; membrane-associated protein D CLL_A1587 putative phage infection protein K01421 yhgE; putative membrane protein D CLL_A2640 putative phage infection protein K01421 yhgE; putative membrane protein D CLL_A2641 phage infection protein K01421 yhgE; putative membrane protein D CLL_A2966 putative membrane protein K08974 K08974; putative membrane protein D CLL_A0066 bacterial membrane flanked domain protein K08981 K08981; putative membrane protein D CLL_A1975 phnA; alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA C 99997 Function unknown D CLL_A2986 heme biosynthesis K06871 K06871; uncharacterized protein D CLL_A2156 conserved hypothetical protein K06872 K06872; uncharacterized protein D CLL_A2169 alpha/beta hydrolase K06889 K06889; uncharacterized protein D CLL_A1683 alpha/beta hydrolase K06889 K06889; uncharacterized protein D CLL_A1762 HD domain protein K06950 K06950; uncharacterized protein D CLL_A1737 sodium:dicarboxylate symporter family protein K06956 K06956; uncharacterized protein D CLL_A1247 conserved domain protein K06960 K06960; uncharacterized protein D CLL_A0221 tetracycline resistance protein K06962 K06962; uncharacterized protein D CLL_A1217 conserved protein YugP K06973 K06973; uncharacterized protein D CLL_A1137 regulatory protein K07035 K07035; uncharacterized protein D CLL_A1997 conserved domain protein K07069 K07069; uncharacterized protein D CLL_A1334 putative permease K07089 K07089; uncharacterized protein D CLL_A3479 transporter K07090 K07090; uncharacterized protein D CLL_A0419 phosphodiesterase, family K07095 K07095; uncharacterized protein D CLL_A2152 phosphoesterase K07098 K07098; uncharacterized protein D CLL_A1324 Ser/Thr protein phosphatase family protein K07098 K07098; uncharacterized protein D CLL_A3163 Ser/Thr protein phosphatase family protein K07099 K07099; uncharacterized protein D CLL_A0015 transcriptional regulator, biotin repressor family K07105 K07105; uncharacterized protein D CLL_A0067 short chain dehydrogenase K07124 K07124; uncharacterized protein D CLL_A1848 Sel1 repeat family K07126 K07126; uncharacterized protein D CLL_A0295 oxidoreductase, FAD-binding K07137 K07137; uncharacterized protein D CLL_A0083 radical SAM protein, family K07139 K07139; uncharacterized protein D CLL_A0627 YczE K07149 K07149; uncharacterized protein D CLL_A0738 putative membrane protein K07149 K07149; uncharacterized protein D CLL_A2799 integral membrane protein K07150 K07150; uncharacterized protein D CLL_A1038 putative membrane protein K07150 K07150; uncharacterized protein D CLL_A0900 GatB/Yqey domain protein K09117 K09117; uncharacterized protein D CLL_A2035 putative hemerythrin HHE cation binding domain subfamily K09155 K09155; uncharacterized protein D CLL_A1718 conserved hypothetical protein K09157 K09157; uncharacterized protein D CLL_A0065 bacterial membrane flanked domain protein K09167 K09167; uncharacterized protein D CLL_A1994 conserved hypothetical protein K09702 K09702; uncharacterized protein D CLL_A1398 conserved hypothetical protein K09705 K09705; uncharacterized protein D CLL_A0795 conserved hypothetical protein K09749 K09749; uncharacterized protein D CLL_A2229 conserved hypothetical protein K09749 K09749; uncharacterized protein D CLL_A1576 conserved hypothetical protein K09764 K09764; uncharacterized protein D CLL_A3160 conserved hypothetical protein K09766 K09766; uncharacterized protein D CLL_A0404 Emg2 protein K09768 K09768; uncharacterized protein D CLL_A2542 conserved hypothetical protein K09770 K09770; uncharacterized protein D CLL_A2551 conserved domain protein K09779 K09779; uncharacterized protein D CLL_A1291 hypothetical protein K09779 K09779; uncharacterized protein D CLL_A3091 yhbH; sporulation protein YhbH K09786 K09786; uncharacterized protein D CLL_A1244 helix-turn-helix protein, YlxM/p13 family K09787 K09787; uncharacterized protein D CLL_A2546 S1 RNA binding domain protein K00243 K00243; uncharacterized protein D CLL_A2361 conserved hypothetical protein K09861 K09861; uncharacterized protein D CLL_A1502 outer surface protein K09963 K09963; uncharacterized protein D CLL_A3061 outer surface protein K09963 K09963; uncharacterized protein D CLL_A0579 conserved hypothetical protein K07584 ysxB; uncharacterized protein D CLL_A3539 conserved hypothetical protein TIGR00153 K07220 K07220; uncharacterized protein D CLL_A1271 conserved hypothetical protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 11, 2024