+F Repair protein KO #

  DNA Repair and Recombination Proteins - Coprinopsis cinerea (gray shag)

% ! AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D CC1G_11101 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CC1G_14649 photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E CC1G_10296 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E CC1G_09247 hypothetical protein K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29] E CC1G_15688 A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E CC1G_11852 hypothetical protein K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-] E CC1G_01194 N-glycosylase/DNA lyase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] E CC1G_03889 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E CC1G_13815 endonuclease IV K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2] E CC1G_01133 DNA-(apurinic or apyrimidinic site) lyase K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2] E CC1G_05939 DNA-(apurinic or apyrimidinic site) lyase 2 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2] D Long Patch-BER factors E DNA polymerase delta complex F CC1G_05692 delta DNA polymerase K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] F CC1G_11690 delta DNA polymerase K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] F CC1G_03792 DNA polymerase subunit delta-2 K02328 POLD2; DNA polymerase delta subunit 2 F CC1G_00910 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3 F CC1G_14810 hypothetical protein K03505 POLD4; DNA polymerase delta subunit 4 E DNA polymerase epsilon complex F CC1G_09909 DNA polymerase epsilon catalytic subunit A K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7] F CC1G_00389 epsilon DNA polymerase K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7] F CC1G_12238 hypothetical protein K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7] F CC1G_02946 hypothetical protein K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7] E CC1G_05633 PCNA K04802 PCNA; proliferating cell nuclear antigen E CC1G_08033 flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] E CC1G_07679 hypothetical protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] E CC1G_11289 DNA ligase I K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Short Patch-BER factors E CC1G_00661 hypothetical protein K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-] D Other BER factors E CC1G_01574 hypothetical protein K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-] E CC1G_04299 hypothetical protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] E CC1G_05202 polynucleotide kinase 3'-phosphatase K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78] E CC1G_01597 DNA polymerase lambda K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-] E CC1G_04200 poly(ADP)-ribose polymerase K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30] C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex F CC1G_13076 DNA repair protein rhp42 K10838 XPC; xeroderma pigmentosum group C-complementing protein F CC1G_06820 hypothetical protein K10839 RAD23; UV excision repair protein RAD23 E Cul4-DDB2 complex F CC1G_08674 Rbx1 protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] F CC1G_02887 Cullin-4B K10609 CUL4; cullin 4 F CC1G_02971 hypothetical protein K10610 DDB1; DNA damage-binding protein 1 E NER4 complex F CC1G_14031 DNA dependent ATPase K15082 RAD7; DNA repair protein RAD7 F CC1G_09941 DNA repair protein rad16 K15083 RAD16; DNA repair protein RAD16 D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex F CC1G_11229 RNA polymerase II large subunit K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] F CC1G_15845 DNA-dependent RNA polymerase II second largest subunit K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] F CC1G_01891 DNA-directed RNA polymerase II polypeptide K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 F CC1G_00908 hypothetical protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 F CC1G_06442 DNA-directed RNA polymerase I K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 F CC1G_01807 subunit common to RNA polymerase I K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 F CC1G_04529 DNA-directed RNA polymerase II subunit K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 F CC1G_03663 RNA polymerase I K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 F CC1G_07076 DNA-directed RNA polymerase II K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 F CC1G_02497 DNA-directed RNA polymerase II K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 E Cul4-CSA complex F CC1G_08674 Rbx1 protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] F CC1G_02887 Cullin-4B K10609 CUL4; cullin 4 F CC1G_02971 hypothetical protein K10610 DDB1; DNA damage-binding protein 1 E Other TCR factor F CC1G_04229 hypothetical protein K25829 ELOF1; transcription elongation factor 1 D TFIIH complex E CC1G_06434 DNA helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] E CC1G_04251 transcription factor TFIIH complex subunit Rad15 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] E CC1G_03201 hypothetical protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 E CC1G_04544 RNA polymerase II transcription factor K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 E CC1G_04479 basic transcription factor 2.35KD subunit K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 E CC1G_10045 transcription factor TFIIH complex subunit Tfb2 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 E CC1G_09807 hypothetical protein K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit E CC1G_00997 CMGC/CDK/CDK7 protein kinase K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E CC1G_03645 cyclin-dependent protein kinase regulator K06634 CCNH; cyclin H E CC1G_05169 transcription/repair factor TFIIH subunit Tfb3 K10842 MNAT1; CDK-activating kinase assembly factor MAT1 D RPA (replication factor A) E CC1G_01113 replication factor-A protein 1 K07466 RFA1; replication factor A1 E CC1G_13904 hypothetical protein K10739 RFA2; replication factor A2 E CC1G_02450 hypothetical protein K10740 RPA3; replication factor A3 D Other NER factors E CC1G_13604 hydrophilic protein K10847 XPA; DNA-repair protein complementing XP-A cells E CC1G_04546 DNA excision repair protein ERCC-1 K10849 ERCC1; DNA excision repair protein ERCC-1 E CC1G_02791 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] E CC1G_06293 flap structure-specific endonuclease K10846 ERCC5; DNA excision repair protein ERCC-5 E CC1G_11289 DNA ligase I K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] E CC1G_08995 hypothetical protein K15075 MET18; DNA repair/transcription protein MET18/MMS19 E CC1G_14444 ubiquitin ligase SCF complex subunit Cullin K03869 CUL3; cullin 3 E CC1G_08493 hypothetical protein K03872 ELOC; elongin-C E CC1G_01156 hypothetical protein K15077 ELA1; elongin-A C MMR (mismatch excision repair) D Mismatch and loop recognition factors E CC1G_05221 DNA mismatch repair protein MSH2 K08735 MSH2; DNA mismatch repair protein MSH2 E CC1G_03897 DNA mismatch repair protein MSH3 K08736 MSH3; DNA mismatch repair protein MSH3 E CC1G_07657 DNA mismatch repair protein msh6 K08737 MSH6; DNA mismatch repair protein MSH6 D MutL homologs E CC1G_05322 DNA binding protein K08734 MLH1; DNA mismatch repair protein MLH1 E CC1G_07970 DNA mismatch repair protein K10858 PMS2; DNA mismatch repair protein PMS2 E CC1G_14675 hypothetical protein K08739 MLH3; DNA mismatch repair protein MLH3 D DNA polymerase delta complex E CC1G_05692 delta DNA polymerase K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] E CC1G_11690 delta DNA polymerase K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] E CC1G_03792 DNA polymerase subunit delta-2 K02328 POLD2; DNA polymerase delta subunit 2 E CC1G_00910 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3 E CC1G_14810 hypothetical protein K03505 POLD4; DNA polymerase delta subunit 4 D RPA (replication factor A) E CC1G_01113 replication factor-A protein 1 K07466 RFA1; replication factor A1 E CC1G_13904 hypothetical protein K10739 RFA2; replication factor A2 E CC1G_02450 hypothetical protein K10740 RPA3; replication factor A3 D RFC (replication factor C) E CC1G_11113 purine nucleotide binding protein K10754 RFC1; replication factor C subunit 1 E CC1G_01803 replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4 E CC1G_10825 replication factor C K10755 RFC2_4; replication factor C subunit 2/4 E CC1G_00877 DNA replication factor K10756 RFC3_5; replication factor C subunit 3/5 E CC1G_11164 DNA clamp loader K10756 RFC3_5; replication factor C subunit 3/5 D Other MMR factors E CC1G_05633 PCNA K04802 PCNA; proliferating cell nuclear antigen E CC1G_02550 exodeoxyribonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-] E CC1G_11289 DNA ligase I K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] E CC1G_04195 hypothetical protein K24755 WDR76; WD repeat-containing protein 76 B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex E CC1G_10319 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11 E CC1G_03010 RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex E CC1G_10319 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11 E CC1G_03010 RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] D BRCA complex E CC1G_06567 hypothetical protein K08775 BRCA2; breast cancer 2 susceptibility protein E CC1G_10538 Rah1 K04482 RAD51; DNA repair protein RAD51 D RecA family proteins E CC1G_10538 Rah1 K04482 RAD51; DNA repair protein RAD51 E CC1G_02546 hypothetical protein K10870 RAD51L2; RAD51-like protein 2 E CC1G_06263 hypothetical protein K10871 RAD51L3; RAD51-like protein 3 E CC1G_06798 recA/RAD51 family protein K10879 XRCC2; DNA-repair protein XRCC2 E CC1G_03822 Rad51B protein K10958 RAD57; DNA repair protein RAD57 D Rad52 family proteins E CC1G_07736 RAD52 DNA repair protein RADC K10873 RAD52; DNA repair and recombination protein RAD52 D Rad54 family proteins E CC1G_04178 SNF2 family domain-containing protein K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-] E CC1G_14217 RAD54B protein K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-] D RecQ family DNA helicases E CC1G_15741 ATP-dependent DNA helicase K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4] E CC1G_03338 hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4] D Bloom's syndrome complex (BTR) E CC1G_03338 hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4] E CC1G_02333 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] D RPA (replication factor A) E CC1G_01113 replication factor-A protein 1 K07466 RFA1; replication factor A1 E CC1G_13904 hypothetical protein K10739 RFA2; replication factor A2 E CC1G_02450 hypothetical protein K10740 RPA3; replication factor A3 D Protein phosphatase 4 E CC1G_10873 phsophatase-2a K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16] E CC1G_04318 HEAT repeat family protein K15424 PPP4R1; serine/threonine-protein phosphatase 4 regulatory subunit 1 E CC1G_03888 hypothetical protein K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2 E CC1G_01412 nuclear protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3 D AP-5 complex D SMC5-SMC6 complex E CC1G_12433 chromosome structural maintenance protein smc5 K22803 SMC5; structural maintenance of chromosomes protein 5 E CC1G_05412 hypothetical protein K22804 SMC6; structural maintenance of chromosomes protein 6 E CC1G_11940 hypothetical protein K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27] E CC1G_03460 hypothetical protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-] E CC1G_01911 Smc5-6 complex non-SMC subunit Nse4 K22825 NSMCE4; non-structural maintenance of chromosomes element 4 D Other HR factors E CC1G_02679 hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1 E CC1G_14206 structure-specific endonuclease catalytic subunit K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-] E CC1G_03074 hypothetical protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-] E CC1G_07381 hypothetical protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-] E CC1G_15397 hypothetical protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-] E CC1G_02678 hypothetical protein K11339 MORF4L1; mortality factor 4-like protein 1 E CC1G_08248 metal-dependent phosphohydrolase K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] E CC1G_04492 hypothetical protein K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7 E CC1G_13736 hypothetical protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-] E CC1G_07591 hypothetical protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-] E CC1G_08618 DEAH family protein K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4] C NHEJ (non-homologous end-joining) D DNA-PK complex E CC1G_08102 Ku70 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1 E CC1G_08633 Ku80 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2 D MRX complex E CC1G_10319 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11 E CC1G_03010 RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] D DNA Ligase 4 complex E CC1G_14831 DNA ligase IV K10777 LIG4; DNA ligase 4 [EC:6.5.1.1] E CC1G_14863 hypothetical protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1] D X-family DNA polymerases E CC1G_01597 DNA polymerase lambda K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-] E CC1G_00661 hypothetical protein K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-] E CC1G_09351 DNA polymerase mu K10981 POL4; DNA polymerase IV [EC:2.7.7.7] D Other NHEJ factors E CC1G_04299 hypothetical protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] E CC1G_09825 hypothetical protein K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-] E CC1G_12162 hypothetical protein K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-] E CC1G_07086 hypothetical protein K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-] C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors D Bloom's syndrome complex (BTR) E CC1G_03338 hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4] E CC1G_02333 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] D FANCD2-I complex D Downstream FA components E CC1G_06567 hypothetical protein K08775 BRCA2; breast cancer 2 susceptibility protein D Other FA pathway factors E CC1G_01329 hypothetical protein K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1] E CC1G_10538 Rah1 K04482 RAD51; DNA repair protein RAD51 E CC1G_02546 hypothetical protein K10870 RAD51L2; RAD51-like protein 2 E CC1G_03814 telomeric DNA binding protein K11137 TELO2; telomere length regulation protein E CC1G_02644 hypothetical protein K15361 WDR48; WD repeat-containing protein 48 C Other DSBR factors D Protein phosphatase 6 E CC1G_02102 protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16] D Ubiquitin ligases D Others E CC1G_01529 guanyl nucleotide binding protein K23314 WRAP53; telomerase Cajal body protein 1 E CC1G_13608 transcription factor K24752 WDR70; WD repeat-containing protein 70 E CC1G_04195 hypothetical protein K24755 WDR76; WD repeat-containing protein 76 B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases D CC1G_12976 eta DNA polymerase K03509 POLH; DNA polymerase eta [EC:2.7.7.7] D CC1G_14181 DNA polymerase IV K03511 POLK; DNA polymerase kappa [EC:2.7.7.7] D CC1G_06070 REV1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-] C B-family DNA polymerases D CC1G_13640 REV3 K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7] C A-family DNA polymerase C Rad6 epistasis group D CC1G_08562 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23] D CC1G_11517 hypothetical protein K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27] D CC1G_00528 DNA repair protein RAD5 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-] D CC1G_01912 hypothetical protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27] D CC1G_05934 ubiquitin-conjugating enzyme K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant D CC1G_15409 ubiquitin-conjugating enzyme E2 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23] C Other TLS factors D CC1G_05633 PCNA K04802 PCNA; proliferating cell nuclear antigen D CC1G_03737 hypothetical protein K26957 GCNA; germ cell nuclear acidic protein B Check point factors C Rad9-Hus1-Rad1 complex D CC1G_03214 hypothetical protein K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2] D CC1G_08064 hypothetical protein K10903 HUS1; HUS1 checkpoint protein D CC1G_03866 hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2] C HRAD17(Rad24)-RFC complex D CC1G_06464 hypothetical protein K06662 HRAD17; cell cycle checkpoint protein D CC1G_01803 replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4 D CC1G_10825 replication factor C K10755 RFC2_4; replication factor C subunit 2/4 D CC1G_00877 DNA replication factor K10756 RFC3_5; replication factor C subunit 3/5 D CC1G_11164 DNA clamp loader K10756 RFC3_5; replication factor C subunit 3/5 C Rad17-Mec3-Ddc1 complex D CC1G_03866 hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2] C FPC (fork protection complex) D CC1G_07534 topoisomerase 1-associated factor 1 K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1 D CC1G_01311 hypothetical protein K11272 MRC1; mediator of replication checkpoint protein 1 C Triple T complex D CC1G_03814 telomeric DNA binding protein K11137 TELO2; telomere length regulation protein D CC1G_01850 hypothetical protein K20403 TTI1; TELO2-interacting protein 1 C BAG6-UBL4A-GET4 complex D CC1G_11085 ubiquitin family protein K23388 UBL4; ubiquitin-like protein 4 D CC1G_10037 cytoplasmic protein K23387 GET4; golgi to ER traffic protein 4 C Other check point factors D CC1G_08126 atypical/PIKK/ATR protein kinase K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1] D CC1G_00839 atypical/PIKK/ATM protein kinase K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1] D CC1G_02812 CAMK/CAMKL/CHK1 protein kinase K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1] D CC1G_03913 tyrosine phosphatase K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48] D CC1G_00275 SGF14A K06630 YWHAE; 14-3-3 protein epsilon D CC1G_01418 hypothetical protein K06630 YWHAE; 14-3-3 protein epsilon D CC1G_09319 CAMK/RAD53 protein kinase K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-] D CC1G_01961 other/WEE protein kinase K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1] D CC1G_13597 katanin p60 ATPase domain-containing protein K12196 VPS4; vacuolar protein-sorting-associated protein 4 D CC1G_06310 hypothetical protein K25059 SDE2; replication stress response regulator SDE2 B Other factors with a suspected DNA repair function C DNA polymerases D CC1G_03896 DNA-directed DNA polymerase K02331 POL5; DNA polymerase phi [EC:2.7.7.7] C Nucleases D CC1G_05711 DNA cross-link repair protein pso2/snm1 K15340 DCLRE1A; DNA cross-link repair 1A protein D CC1G_06585 hypothetical protein K17815 EXO5; exonuclease V [EC:3.1.-.-] D CC1G_05313 hypothetical protein K05986 NUCS; nuclease S1 [EC:3.1.30.1] C Helicases D CC1G_11203 hypothetical protein K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-] C PSO4 complex D CC1G_10289 nuclear matrix protein NMP200 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27] D CC1G_11763 CDC5 K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1 D CC1G_04420 hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27 D CC1G_14323 pre-mRNA-splicing factor PRP46 K12862 PLRG1; pleiotropic regulator 1 C Modulation of nucleotide pools D CC1G_05544 nudix-type domain-containing protein 1 isoform p22 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CC1G_00125 dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CC1G_03383 hypothetical protein K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1] D CC1G_00200 ribonucleotide reductase small subunit K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] D CC1G_00201 ribonucleotide reductase small subunit K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D CC1G_11101 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CC1G_14649 photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E CC1G_10296 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E CC1G_14150 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] E CC1G_15688 A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E CC1G_03765 AtMMH-1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] E CC1G_03889 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D RecJ D DNA ligase D DNA polymerase I C NER (nucleotide excision repair) D GGR (global genome repair) factors E CC1G_14395 ATP-dependent DNA helicase pcra K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) E TRCF (transcription-repair coupling factor) C MMR (mismatch excision repair) D Mismatch and loop recognition factors D Molecular matchmaker D Strand discrimination factor D DNA exonucleases D DNA polymerase III holoenzyme D DNA ligase D Other MMR factors E CC1G_14395 ATP-dependent DNA helicase pcra K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins D RecFOR pathway proteins D AddAB pathway proteins D Other HR factor D Archaeal homologous recombinant proteins C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex D SHIIR (short-homology-independent illegitimate recombination) E Facilitator E Supressor D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway E Facilitator E Supressor B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C Other SOS response factors B Other factors with a suspected DNA repair function C DNA polymerase C DNA helicases C Modulation of nucleotide pools D CC1G_05544 nudix-type domain-containing protein 1 isoform p22 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CC1G_00125 dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] C Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024