+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Corynebacterium cystitidis

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D SAMEA4530656_0801 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D SAMEA4530656_0357 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C SAMEA4530656_0512 era; GTPase Era K03595 era; GTPase C SAMEA4530656_0441 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C SAMEA4530656_0866 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA C SAMEA4530656_1006 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB C SAMEA4530656_2076 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D SAMEA4530656_1583 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D SAMEA4530656_1026 fmu; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D SAMEA4530656_0845 rlmG; Ribosomal RNA large subunit methyltransferase G K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D SAMEA4530656_1232 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D SAMEA4530656_0506 rsmE; 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D SAMEA4530656_2606 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D SAMEA4530656_0725 rsmH; 16S rRNA m(4)C1402 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D SAMEA4530656_1595 rsmI; predicted methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D SAMEA4530656_1175 tlyA; predicted rRNA methylase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D SAMEA4530656_1431 rrmA; SAM-dependent methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D SAMEA4530656_0204 SpoU rRNA methylase family protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D SAMEA4530656_0829 rlmN; ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D SAMEA4530656_1175 tlyA; predicted rRNA methylase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D SAMEA4530656_2781 rluA; pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D SAMEA4530656_1163 rluB; pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D SAMEA4530656_0750 rluD; ribosomal large subunit pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C SAMEA4530656_1953 GNAT family acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C SAMEA4530656_0810 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM B rRNA processing factors C SAMEA4530656_0801 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C SAMEA4530656_0438 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] C SAMEA4530656_0996 yrrK; Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] B rRNA helicases C SAMEA4530656_1390 deaD; helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] B GTPases C SAMEA4530656_0512 era; GTPase Era K03595 era; GTPase C SAMEA4530656_1762 rsgA; Ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C SAMEA4530656_1161 der; GTP-binding protein Der K03977 engA; GTPase C SAMEA4530656_0441 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] C SAMEA4530656_0910 hflX; GTP-binding protein K03665 hflX; GTPase B Other maturation factors C SAMEA4530656_1357 rimN; putative translation factor (SUA5) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C SAMEA4530656_0981 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C SAMEA4530656_0868 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C SAMEA4530656_0865 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP C SAMEA4530656_2433 ribosome-associated protein K14761 rlbA; ribosome-associated protein C SAMEA4530656_0450 ybeB; Protein yqeL K09710 ybeB; ribosome-associated protein C SAMEA4530656_0508 metalloprotease K07042 ybeY; probable rRNA maturation factor C SAMEA4530656_1476 engD; GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase C SAMEA4530656_0800 metal-binding, possibly nucleic acid-binding protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024