+D GENES KO #

  KEGG Orthology (KO) - Caproicibacter fermentans

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:cfem00010] D HCR03_15295 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HCR03_18050 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HCR03_03510 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HCR03_05470 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HCR03_02975 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D HCR03_17070 diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D HCR03_01740 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D HCR03_07545 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D HCR03_05805 class II aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HCR03_11695 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HCR03_06765 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HCR03_17075 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HCR03_06705 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HCR03_06760 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D HCR03_07500 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D HCR03_06770 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D HCR03_09395 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HCR03_03045 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HCR03_13410 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D HCR03_06880 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HCR03_12875 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D HCR03_08805 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D HCR03_13170 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D HCR03_00275 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D HCR03_00280 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HCR03_18055 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D HCR03_12575 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HCR03_13065 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D HCR03_10015 family 1 glycosylhydrolase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D HCR03_05575 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HCR03_08865 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HCR03_10010 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HCR03_08875 PTS transporter subunit EIIC K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] C 00020 Citrate cycle (TCA cycle) [PATH:cfem00020] D HCR03_06715 citrate/2-methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D HCR03_01910 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D HCR03_01920 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D HCR03_06880 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HCR03_01005 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D HCR03_04930 fumarate hydratase C-terminal domain-containing protein K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D HCR03_13065 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D HCR03_12875 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:cfem00030] D HCR03_03510 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HCR03_12435 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D HCR03_03545 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HCR03_09625 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HCR03_16000 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HCR03_16005 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HCR03_00595 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HCR03_00600 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HCR03_01860 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D HCR03_16010 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D HCR03_07925 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D HCR03_03285 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D HCR03_05910 LacI family DNA-binding transcriptional regulator K00852 rbsK; ribokinase [EC:2.7.1.15] D HCR03_05915 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D HCR03_12285 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D HCR03_07895 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D HCR03_18755 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D HCR03_12575 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HCR03_13395 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D HCR03_02590 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D HCR03_00135 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D HCR03_02595 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D HCR03_03280 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D HCR03_07545 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D HCR03_05805 class II aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HCR03_11695 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HCR03_01740 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D HCR03_05470 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HCR03_02975 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D HCR03_17070 diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:cfem00040] D HCR03_06955 tagaturonate reductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58] D HCR03_06960 altronate dehydratase K01685 uxaA; altronate hydrolase [EC:4.2.1.7] D HCR03_11705 UxaA family hydrolase K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7] D HCR03_13080 UxaA family hydrolase K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7] D HCR03_18380 UxaA family hydrolase K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7] D HCR03_11710 UxaA family hydrolase K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7] D HCR03_13075 UxaA family hydrolase K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7] D HCR03_18385 UxaA family hydrolase K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7] D HCR03_01570 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D HCR03_17135 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D HCR03_01580 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D HCR03_19140 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HCR03_08110 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D HCR03_12435 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D HCR03_08105 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D HCR03_17840 hypothetical protein K00854 xylB; xylulokinase [EC:2.7.1.17] D HCR03_00220 FGGY-family carbohydrate kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D HCR03_00605 zinc-binding dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D HCR03_13070 dihydrodipicolinate synthase family protein K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28] D HCR03_16045 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D HCR03_00585 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D HCR03_00640 L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:cfem00051] D HCR03_08950 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D HCR03_07830 cupin domain-containing protein K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D HCR03_09585 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D HCR03_16045 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D HCR03_00585 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D HCR03_00640 L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D HCR03_05470 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HCR03_02975 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D HCR03_17070 diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D HCR03_01740 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D HCR03_07590 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17] D HCR03_16180 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17] D HCR03_08835 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D HCR03_10685 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D HCR03_00605 zinc-binding dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D HCR03_07545 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D HCR03_05805 class II aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HCR03_11695 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HCR03_06765 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HCR03_17075 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HCR03_01860 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D HCR03_16010 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D HCR03_08825 PTS sugar transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D HCR03_08830 PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D HCR03_09825 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D HCR03_09840 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component D HCR03_09835 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component D HCR03_07595 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197] D HCR03_07605 PTS mannitol transporter subunit IICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] C 00052 Galactose metabolism [PATH:cfem00052] D HCR03_18055 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D HCR03_12635 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HCR03_19140 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HCR03_12575 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HCR03_15295 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HCR03_18050 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HCR03_09755 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D HCR03_16050 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D HCR03_00130 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D HCR03_00620 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D HCR03_16055 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D HCR03_00125 PTS lactose transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D HCR03_00625 PTS fructose transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D HCR03_16060 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component D HCR03_00120 PTS maltose transporter subunit IIABC K02775 gatC; galactitol PTS system EIIC component D HCR03_00630 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component D HCR03_05470 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HCR03_02975 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D HCR03_17070 diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D HCR03_00115 dgoD; galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D HCR03_01500 mandelate racemase/muconate lactonizing enzyme family protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D HCR03_01510 mandelate racemase/muconate lactonizing enzyme family protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D HCR03_09770 DUF5110 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D HCR03_18280 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] C 00053 Ascorbate and aldarate metabolism [PATH:cfem00053] D HCR03_09425 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D HCR03_09430 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D HCR03_08110 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D HCR03_00280 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:cfem00500] D HCR03_09770 DUF5110 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D HCR03_08945 gtfA; sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7] D HCR03_19140 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HCR03_08045 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D HCR03_17015 glycosyl transferase K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20] D HCR03_10015 family 1 glycosylhydrolase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D HCR03_07290 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D HCR03_06695 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D HCR03_06685 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D HCR03_06700 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D HCR03_10710 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D HCR03_11445 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D HCR03_10035 glycoside hydrolase family 13 protein K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D HCR03_10895 alpha-glycosidase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D HCR03_12270 glycoside hydrolase family 13 protein K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D HCR03_18505 alpha-glycosidase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D HCR03_18280 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D HCR03_18300 glycoside hydrolase family 66 protein K05988 dexA; dextranase [EC:3.2.1.11] D HCR03_10690 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D HCR03_18150 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6] D HCR03_05575 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HCR03_08865 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HCR03_10010 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HCR03_08845 PTS transporter subunit EIIC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D HCR03_08860 6-phospho-alpha-glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122] D HCR03_12575 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HCR03_15295 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HCR03_18050 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HCR03_03510 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HCR03_08950 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cfem00520] D HCR03_06680 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D HCR03_18160 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D HCR03_00330 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D HCR03_07220 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D HCR03_05730 N,N'-diacetylchitobiose phosphorylase K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280] D HCR03_08160 N,N'-diacetylchitobiose phosphorylase K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280] D HCR03_05575 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HCR03_08865 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HCR03_10010 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HCR03_05580 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D HCR03_05690 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D HCR03_05695 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D HCR03_07195 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D HCR03_08950 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D HCR03_07615 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HCR03_17400 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D HCR03_13400 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D HCR03_15885 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D HCR03_00335 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D HCR03_02730 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HCR03_04950 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HCR03_05495 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HCR03_07200 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D HCR03_17320 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D HCR03_17325 Gfo/Idh/MocA family oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D HCR03_17310 N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D HCR03_17330 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] D HCR03_13660 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D HCR03_08875 PTS transporter subunit EIIC K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D HCR03_15295 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HCR03_18050 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HCR03_12575 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HCR03_19140 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HCR03_12635 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HCR03_09825 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D HCR03_09840 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component D HCR03_09835 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component D HCR03_03510 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HCR03_07830 cupin domain-containing protein K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D HCR03_09585 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D HCR03_07275 DegT/DnrJ/EryC1/StrS family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D HCR03_07290 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D HCR03_07285 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D HCR03_06695 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:cfem00620] D HCR03_12875 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D HCR03_06880 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HCR03_00275 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D HCR03_01960 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D HCR03_11755 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D HCR03_03045 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HCR03_01315 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D HCR03_01295 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D HCR03_01305 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D HCR03_01310 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D HCR03_00280 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HCR03_04465 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D HCR03_18985 FAD-binding oxidoreductase K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436] D HCR03_08805 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D HCR03_13170 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D HCR03_05305 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D HCR03_09100 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D HCR03_11885 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D HCR03_00940 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D HCR03_07675 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D HCR03_11700 larA; nickel-dependent lactate racemase K22373 larA; lactate racemase [EC:5.1.2.1] D HCR03_15810 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D HCR03_03435 oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D HCR03_03975 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D HCR03_10480 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D HCR03_18535 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D HCR03_01005 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D HCR03_04930 fumarate hydratase C-terminal domain-containing protein K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D HCR03_13065 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D HCR03_13410 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D HCR03_03715 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HCR03_18520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HCR03_05200 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D HCR03_07075 hypothetical protein K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14] D HCR03_07080 homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cfem00630] D HCR03_06715 citrate/2-methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D HCR03_01910 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D HCR03_03715 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HCR03_18520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HCR03_02610 VOC family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D HCR03_12895 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D HCR03_08030 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D HCR03_10070 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D HCR03_11870 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D HCR03_00590 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D HCR03_02390 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCR03_15470 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCR03_15540 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCR03_03565 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HCR03_06865 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D HCR03_06870 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D HCR03_06855 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D HCR03_06880 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HCR03_06860 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D HCR03_15610 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D HCR03_02590 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D HCR03_00135 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D HCR03_17370 cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9] C 00640 Propanoate metabolism [PATH:cfem00640] D HCR03_04465 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D HCR03_01960 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D HCR03_11755 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D HCR03_06880 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HCR03_03700 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D HCR03_18965 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D HCR03_01315 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D HCR03_01295 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D HCR03_01305 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D HCR03_01310 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D HCR03_02610 VOC family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D HCR03_05815 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D HCR03_08805 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D HCR03_13170 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D HCR03_13235 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D HCR03_18140 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] C 00650 Butanoate metabolism [PATH:cfem00650] D HCR03_03715 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HCR03_18520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HCR03_03705 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D HCR03_03710 enoyl-CoA hydratase/isomerase family protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D HCR03_03700 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D HCR03_18965 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D HCR03_03975 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D HCR03_10480 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D HCR03_18535 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D HCR03_03440 biotin/lipoyl-binding protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D HCR03_18530 biotin/lipoyl-binding protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D HCR03_18525 OadG family protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D HCR03_18540 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D HCR03_18545 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D HCR03_12875 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D HCR03_12910 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D HCR03_12940 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D HCR03_15970 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D HCR03_07280 GNAT family N-acetyltransferase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HCR03_10570 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HCR03_11965 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HCR03_11970 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:cfem00660] D HCR03_07280 GNAT family N-acetyltransferase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HCR03_10570 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HCR03_11965 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HCR03_11970 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D HCR03_05195 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D HCR03_12955 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D HCR03_05190 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D HCR03_12960 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D HCR03_05185 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:cfem00562] D HCR03_05770 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D HCR03_05790 iolE; myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44] D HCR03_05795 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D HCR03_05765 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D HCR03_05800 iolC; 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D HCR03_05815 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D HCR03_06765 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HCR03_17075 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:cfem00190] D HCR03_14555 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D HCR03_05685 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D HCR03_01975 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D HCR03_08995 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D HCR03_01970 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D HCR03_08990 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D HCR03_02000 V-type ATPase subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D HCR03_09005 V-type ATPase subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D HCR03_01965 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D HCR03_08985 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D HCR03_01980 hypothetical protein K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D HCR03_09010 hypothetical protein K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D HCR03_01985 V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D HCR03_09000 V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D HCR03_09025 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H D HCR03_01995 ATPase K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D HCR03_09020 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D HCR03_01990 hypothetical protein K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D HCR03_09015 V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D HCR03_16680 putative manganese-dependent inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:cfem00680] D HCR03_15485 4Fe-4S binding protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D HCR03_03565 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HCR03_12895 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D HCR03_09395 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HCR03_07545 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D HCR03_05805 class II aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HCR03_11695 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HCR03_01740 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D HCR03_05470 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HCR03_02975 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D HCR03_17070 diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D HCR03_01960 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D HCR03_11755 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D HCR03_07500 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D HCR03_06770 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D HCR03_10060 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HCR03_10290 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HCR03_16865 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HCR03_00635 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HCR03_10285 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00910 Nitrogen metabolism [PATH:cfem00910] D HCR03_07050 nitrogenase component I subunit alpha K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D HCR03_07055 nitrogenase molybdenum-iron protein subunit beta K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D HCR03_07035 nifH; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D HCR03_07975 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D HCR03_16315 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D HCR03_01285 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D HCR03_16860 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D HCR03_02390 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCR03_15470 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCR03_15540 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCR03_03340 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D HCR03_18925 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:cfem00920] D HCR03_08260 ATP-binding cassette domain-containing protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D HCR03_17040 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D HCR03_12510 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D HCR03_10595 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D HCR03_05180 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D HCR03_09080 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D HCR03_04850 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:cfem00061] D HCR03_01315 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D HCR03_01295 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D HCR03_01305 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D HCR03_01310 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D HCR03_01265 acyl carrier protein K02078 acpP; acyl carrier protein D HCR03_10485 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D HCR03_01275 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D HCR03_01260 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D HCR03_01290 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HCR03_01280 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HCR03_13110 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HCR03_01300 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D HCR03_01270 fabK; enoyl-[acyl-carrier-protein] reductase FabK K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:cfem00071] D HCR03_03715 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HCR03_18520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HCR03_03700 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D HCR03_18965 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D HCR03_00275 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D HCR03_00280 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:cfem00561] D HCR03_15610 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D HCR03_00280 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HCR03_03315 dhaK; dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D HCR03_03150 dhaL; dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D HCR03_03320 dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D HCR03_18140 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D HCR03_03145 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D HCR03_02095 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D HCR03_03120 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D HCR03_07725 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D HCR03_07755 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D HCR03_02890 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D HCR03_04410 lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D HCR03_09755 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:cfem00564] D HCR03_05175 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D HCR03_01540 NAD(P)/FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D HCR03_03135 NAD(P)/FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D HCR03_16025 NAD(P)/FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D HCR03_03120 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D HCR03_07725 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D HCR03_07755 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D HCR03_02890 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D HCR03_02215 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D HCR03_10600 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D HCR03_16740 phosphatase PAP2 family protein K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27] D HCR03_12205 CDP-alcohol phosphatidyltransferase family protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] D HCR03_17445 CDP-alcohol phosphatidyltransferase family protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:cfem00600] D HCR03_09755 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D HCR03_07220 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:cfem00230] D HCR03_12055 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D HCR03_07895 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D HCR03_18755 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D HCR03_12575 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HCR03_13395 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D HCR03_02425 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D HCR03_00875 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D HCR03_00860 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D HCR03_15905 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D HCR03_00855 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D HCR03_00850 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D HCR03_02420 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D HCR03_02430 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D HCR03_00870 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HCR03_00865 IMP cyclohydrolase K11176 purO; IMP cyclohydrolase [EC:3.5.4.10] D HCR03_03880 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D HCR03_07900 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D HCR03_19180 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D HCR03_03635 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D HCR03_15850 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HCR03_02120 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D HCR03_02440 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D HCR03_03420 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D HCR03_13280 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D HCR03_17235 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D HCR03_03025 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D HCR03_13340 yfbR; 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D HCR03_00935 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D HCR03_02965 phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D HCR03_02435 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D HCR03_19045 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D HCR03_06530 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D HCR03_10345 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D HCR03_00965 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D HCR03_10810 ureidoglycolate lyase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3] D HCR03_09920 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D HCR03_09925 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D HCR03_18925 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:cfem00240] D HCR03_02415 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D HCR03_02410 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D HCR03_10265 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D HCR03_10250 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D HCR03_10255 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D HCR03_02290 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D HCR03_10260 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D HCR03_02200 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D HCR03_00965 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D HCR03_11470 maf; septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D HCR03_01830 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D HCR03_02895 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D HCR03_00950 nucleoside kinase K00876 udk; uridine kinase [EC:2.7.1.48] D HCR03_01855 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D HCR03_06530 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D HCR03_07865 pseudouridine-5'-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70] D HCR03_07935 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D HCR03_13280 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D HCR03_17235 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D HCR03_17225 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D HCR03_13340 yfbR; 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D HCR03_06660 cytidine deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D HCR03_03930 deoxynucleoside kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D HCR03_11460 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D HCR03_03935 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:cfem00250] D HCR03_05875 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D HCR03_06905 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D HCR03_04015 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D HCR03_12670 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D HCR03_05385 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D HCR03_09470 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D HCR03_11040 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D HCR03_02435 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D HCR03_02430 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D HCR03_03340 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D HCR03_16860 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D HCR03_02390 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCR03_15470 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCR03_15540 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCR03_02415 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D HCR03_02410 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D HCR03_07615 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HCR03_02425 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:cfem00260] D HCR03_05445 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D HCR03_02700 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HCR03_05455 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D HCR03_05450 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D HCR03_03245 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D HCR03_15840 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D HCR03_03565 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HCR03_12895 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D HCR03_15610 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D HCR03_07500 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D HCR03_06770 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D HCR03_10060 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HCR03_10290 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HCR03_16865 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HCR03_00635 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HCR03_10285 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D HCR03_06865 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D HCR03_06870 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D HCR03_06855 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D HCR03_06880 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HCR03_06860 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D HCR03_04385 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D HCR03_04390 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D HCR03_05895 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D HCR03_05900 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D HCR03_10565 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D HCR03_00510 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:cfem00270] D HCR03_10595 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D HCR03_05180 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D HCR03_09080 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D HCR03_03065 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D HCR03_02950 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D HCR03_16950 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D HCR03_16960 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D HCR03_17375 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D HCR03_19180 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D HCR03_01395 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D HCR03_14375 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HCR03_14935 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HCR03_02740 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D HCR03_05445 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D HCR03_02700 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HCR03_05455 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D HCR03_06925 4Fe-4S binding protein K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin D HCR03_04850 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D HCR03_02330 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D HCR03_16940 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D HCR03_07130 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HCR03_08805 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D HCR03_13170 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D HCR03_04385 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D HCR03_04390 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D HCR03_05895 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D HCR03_05900 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D HCR03_10060 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HCR03_10290 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HCR03_16865 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HCR03_00635 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HCR03_10285 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:cfem00280] D HCR03_07130 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HCR03_06880 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HCR03_03700 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D HCR03_18965 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D HCR03_02610 VOC family protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D HCR03_05815 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D HCR03_00280 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HCR03_12910 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D HCR03_12940 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D HCR03_15970 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D HCR03_03715 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HCR03_18520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cfem00290] D HCR03_10565 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D HCR03_05195 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D HCR03_12955 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D HCR03_05190 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D HCR03_12960 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D HCR03_05185 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D HCR03_07280 GNAT family N-acetyltransferase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HCR03_10570 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HCR03_11965 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HCR03_11970 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D HCR03_11975 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D HCR03_03060 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D HCR03_17125 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D HCR03_07130 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HCR03_05200 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:cfem00300] D HCR03_05455 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D HCR03_05445 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D HCR03_02700 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HCR03_02705 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D HCR03_13545 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D HCR03_02710 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D HCR03_11370 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D HCR03_11015 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D HCR03_08145 Sapep family Mn(2+)-dependent dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D HCR03_02400 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D HCR03_02405 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D HCR03_16805 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D HCR03_05610 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D HCR03_15925 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D HCR03_04190 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:cfem00310] D HCR03_06880 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HCR03_03715 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HCR03_18520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HCR03_00310 KamA family radical SAM protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] D HCR03_06825 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21] D HCR03_00280 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:cfem00220] D HCR03_11010 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D HCR03_18920 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D HCR03_11040 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D HCR03_09920 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D HCR03_09925 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D HCR03_02390 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCR03_15470 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCR03_15540 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCR03_02415 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D HCR03_02410 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D HCR03_18925 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D HCR03_16860 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D HCR03_11025 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D HCR03_11020 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D HCR03_11035 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D HCR03_11015 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:cfem00330] D HCR03_18315 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D HCR03_16955 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01585 speA; arginine decarboxylase [EC:4.1.1.19] D HCR03_13565 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12] D HCR03_13560 aguB; N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D HCR03_16960 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D HCR03_16950 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D HCR03_16970 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D HCR03_00280 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HCR03_02665 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D HCR03_12540 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D HCR03_12545 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D HCR03_06825 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00340 Histidine metabolism [PATH:cfem00340] D HCR03_02245 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D HCR03_02240 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D HCR03_02275 hisE; phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D HCR03_02270 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D HCR03_02265 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D HCR03_03525 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D HCR03_03520 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D HCR03_02260 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D HCR03_02255 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D HCR03_02020 histidinol-phosphatase HisJ family protein K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D HCR03_02250 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D HCR03_00280 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:cfem00350] D HCR03_02255 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D HCR03_00275 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00360 Phenylalanine metabolism [PATH:cfem00360] D HCR03_03705 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D HCR03_02255 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D HCR03_16120 GNAT family N-acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D HCR03_06825 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21] D HCR03_00205 FAD-dependent oxidoreductase K10797 enr; 2-enoate reductase [EC:1.3.1.31] C 00380 Tryptophan metabolism [PATH:cfem00380] D HCR03_17370 cyclase family protein K07130 kynB; arylformamidase [EC:3.5.1.9] D HCR03_06880 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HCR03_03715 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HCR03_18520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HCR03_00280 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cfem00400] D HCR03_10500 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D HCR03_12395 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D HCR03_10510 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D HCR03_01620 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D HCR03_10515 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D HCR03_10520 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D HCR03_00485 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D HCR03_00490 bifunctional anthranilate synthase component II/anthranilate phosphoribosyltransferase K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18] D HCR03_00500 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D HCR03_00495 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D HCR03_00510 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D HCR03_10525 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D HCR03_10505 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D HCR03_02255 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:cfem00410] D HCR03_00280 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HCR03_03700 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D HCR03_18965 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D HCR03_05815 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:cfem00430] D HCR03_11755 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D HCR03_01960 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:cfem00440] D HCR03_10090 GNAT family N-acetyltransferase K09994 phnO; (aminoalkyl)phosphonate N-acetyltransferase [EC:2.3.1.280] D HCR03_07260 hypothetical protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] D HCR03_09760 hypothetical protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] D HCR03_01790 PHP domain-containing protein K20859 phnPP; phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase [EC:3.1.4.57] C 00450 Selenocompound metabolism [PATH:cfem00450] D HCR03_03065 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D HCR03_15585 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D HCR03_10190 FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D HCR03_13140 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D HCR03_16085 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:cfem00460] D HCR03_08045 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D HCR03_06905 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D HCR03_03565 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:cfem00470] D HCR03_15910 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D HCR03_06825 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21] D HCR03_06630 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HCR03_17940 hypothetical protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HCR03_08600 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D HCR03_08610 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D HCR03_10985 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HCR03_02400 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D HCR03_16805 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:cfem00480] D HCR03_06850 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D HCR03_01920 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D HCR03_10195 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D HCR03_16960 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:cfem00511] D HCR03_07220 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D HCR03_03175 glycoside hydrolase family 2 protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25] C 00540 Lipopolysaccharide biosynthesis [PATH:cfem00540] D HCR03_09590 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D HCR03_15290 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cfem00541] D HCR03_19140 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HCR03_12635 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HCR03_09520 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D HCR03_09515 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D HCR03_09535 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D HCR03_09570 sugar nucleotide-binding protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D HCR03_07290 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D HCR03_07285 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D HCR03_07830 cupin domain-containing protein K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D HCR03_09585 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D HCR03_07275 DegT/DnrJ/EryC1/StrS family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D HCR03_13400 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D HCR03_15885 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D HCR03_17320 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D HCR03_17325 Gfo/Idh/MocA family oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D HCR03_17310 N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D HCR03_17330 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] C 00550 Peptidoglycan biosynthesis [PATH:cfem00550] D HCR03_02730 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HCR03_04950 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HCR03_05495 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HCR03_02310 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D HCR03_10985 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HCR03_06630 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HCR03_17940 hypothetical protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HCR03_04190 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D HCR03_02210 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D HCR03_06495 undecaprenyl diphosphate synthase family protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D HCR03_01900 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HCR03_16360 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HCR03_18460 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HCR03_07630 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D HCR03_07970 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D HCR03_15415 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D HCR03_04965 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HCR03_04955 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D HCR03_05460 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HCR03_03895 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D HCR03_13225 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D HCR03_04975 PASTA domain-containing protein K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D HCR03_15900 penicillin-binding protein K05364 pbpA; penicillin-binding protein A D HCR03_03455 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D HCR03_03515 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D HCR03_06570 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D HCR03_19235 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D HCR03_19260 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D HCR03_03040 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D HCR03_04370 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D HCR03_19245 D-alanyl-D-alanine carboxypeptidase family protein K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14] C 00552 Teichoic acid biosynthesis [PATH:cfem00552] D HCR03_01900 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HCR03_16360 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HCR03_18460 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HCR03_07630 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D HCR03_07970 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D HCR03_15415 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D HCR03_08600 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D HCR03_08610 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D HCR03_08605 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export D HCR03_08615 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein D HCR03_13335 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D HCR03_16090 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D HCR03_00465 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:cfem00543] D HCR03_00165 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D HCR03_05265 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D HCR03_06730 MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D HCR03_01670 glycosyltransferase family 4 protein K20999 pslF; polysaccharide biosynthesis protein PslF D HCR03_10595 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:cfem00730] D HCR03_01350 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D HCR03_03670 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HCR03_12830 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HCR03_12835 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D HCR03_02360 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D HCR03_08210 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D HCR03_08220 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D HCR03_03370 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D HCR03_03365 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D HCR03_10345 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:cfem00740] D HCR03_05830 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D HCR03_05820 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D HCR03_05835 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D HCR03_05825 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D HCR03_12520 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D HCR03_08210 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D HCR03_12055 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D HCR03_05645 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:cfem00750] D HCR03_15545 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D HCR03_15890 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D HCR03_10285 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D HCR03_03245 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D HCR03_05400 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D HCR03_05405 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:cfem00760] D HCR03_05875 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D HCR03_05870 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D HCR03_05880 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D HCR03_15440 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D HCR03_07900 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D HCR03_02130 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D HCR03_00965 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D HCR03_11810 NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D HCR03_05300 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D HCR03_02370 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:cfem00770] D HCR03_07280 GNAT family N-acetyltransferase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HCR03_10570 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HCR03_11965 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HCR03_11970 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D HCR03_11975 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D HCR03_03060 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D HCR03_17125 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D HCR03_16795 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D HCR03_16800 ketopantoate reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D HCR03_17265 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D HCR03_12770 phosphopantothenate--cysteine ligase K21977 coaB; phosphopantothenate---cysteine ligase (CTP) [EC:6.3.2.5] D HCR03_12775 phosphopantothenoylcysteine decarboxylase K01598 PPCDC; phosphopantothenoylcysteine decarboxylase [EC:4.1.1.36] D HCR03_00965 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D HCR03_05000 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D HCR03_04305 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D HCR03_07130 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HCR03_00280 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:cfem00780] D HCR03_01290 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HCR03_01280 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HCR03_13110 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HCR03_01300 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D HCR03_05380 hydE; [FeFe] hydrogenase H-cluster radical SAM maturase HydE K01012 bioB; biotin synthase [EC:2.8.1.6] D HCR03_04325 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:cfem00785] D HCR03_06875 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D HCR03_06880 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HCR03_06865 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D HCR03_06870 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D HCR03_06855 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D HCR03_06860 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:cfem00790] D HCR03_18790 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D HCR03_18775 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D HCR03_18780 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D HCR03_18765 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D HCR03_04875 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D HCR03_18760 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D HCR03_05830 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D HCR03_07745 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D HCR03_14695 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D HCR03_15460 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D HCR03_13695 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] C 00670 One carbon pool by folate [PATH:cfem00670] D HCR03_18765 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D HCR03_01875 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D HCR03_02355 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D HCR03_03565 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HCR03_00860 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D HCR03_00870 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HCR03_03400 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D HCR03_06855 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D HCR03_03065 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D HCR03_03935 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D HCR03_07740 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D HCR03_12440 4Fe-4S dicluster domain-containing protein K25008 rnfC2; ion-translocating oxidoreductase complex subunit C [EC:7.-.-.-] D HCR03_03910 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:cfem00860] D HCR03_04365 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HCR03_05255 flavodoxin domain-containing protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D HCR03_06670 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cfem00130] D HCR03_05650 UbiA family prenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D HCR03_05655 menaquinone biosynthesis decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D HCR03_05645 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D HCR03_10865 NmrA family NAD(P)-binding protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D HCR03_10095 hypothetical protein K09834 VTE1; tocopherol cyclase [EC:5.5.1.24] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:cfem00900] D HCR03_02360 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D HCR03_02220 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D HCR03_18615 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D HCR03_02035 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D HCR03_18620 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D HCR03_02230 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D HCR03_03715 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HCR03_18520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HCR03_05645 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D HCR03_02805 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D HCR03_02210 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D HCR03_06495 undecaprenyl diphosphate synthase family protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis D HCR03_15510 hypothetical protein K10212 K10212; glycosyl-4,4'-diaponeurosporenoate acyltransferase [EC:2.3.1.-] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D HCR03_00280 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation D HCR03_12910 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D HCR03_12940 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D HCR03_15970 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D HCR03_03545 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HCR03_09625 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HCR03_16000 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HCR03_16005 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HCR03_00595 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HCR03_00600 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:cfem00523] D HCR03_09520 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D HCR03_09515 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D HCR03_09535 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D HCR03_09570 sugar nucleotide-binding protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D HCR03_07270 rfbH; lipopolysaccharide biosynthesis protein RfbH K13328 spnQ; dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:4.2.1.164] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D HCR03_09520 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:cfem00946] D HCR03_08045 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D HCR03_03790 choloylglycine hydrolase family protein K24041 yxeI; penicillin V amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis [PATH:cfem00332] D HCR03_12540 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D HCR03_12545 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:cfem00261] D HCR03_05445 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D HCR03_02700 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HCR03_02705 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D HCR03_13545 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D HCR03_02710 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D HCR03_11370 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:cfem00521] D HCR03_15295 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HCR03_18050 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HCR03_12575 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D HCR03_05770 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D HCR03_09520 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D HCR03_09515 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D HCR03_09535 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D HCR03_09570 sugar nucleotide-binding protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D HCR03_15295 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D HCR03_18050 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis D HCR03_09520 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:cfem00401] D HCR03_10505 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D HCR03_02255 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D HCR03_00485 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D HCR03_01275 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D HCR03_01280 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HCR03_13110 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D HCR03_01265 acyl carrier protein K02078 acpP; acyl carrier protein D HCR03_10485 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:cfem00999] D HCR03_02950 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D HCR03_08045 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:cfem00362] D HCR03_11525 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D HCR03_03975 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D HCR03_10480 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D HCR03_18535 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D HCR03_03440 biotin/lipoyl-binding protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D HCR03_18530 biotin/lipoyl-binding protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D HCR03_18525 OadG family protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D HCR03_03705 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D HCR03_03715 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HCR03_18520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation D HCR03_05645 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:cfem00625] D HCR03_00275 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D HCR03_00280 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D HCR03_07055 nitrogenase molybdenum-iron protein subunit beta K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D HCR03_07035 nifH; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D HCR03_07050 nitrogenase component I subunit alpha K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation D HCR03_15485 4Fe-4S binding protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:cfem00643] D HCR03_18540 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D HCR03_18545 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D HCR03_04465 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] C 00791 Atrazine degradation D HCR03_09920 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D HCR03_09925 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:cfem00626] D HCR03_00275 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:cfem03020] D HCR03_03005 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HCR03_03000 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HCR03_10305 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HCR03_03415 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:cfem03010] D HCR03_01815 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D HCR03_01440 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D HCR03_10420 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D HCR03_10310 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D HCR03_10365 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D HCR03_19135 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D HCR03_02990 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D HCR03_10380 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D HCR03_12415 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D HCR03_10455 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D HCR03_10315 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D HCR03_02995 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D HCR03_10320 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D HCR03_10385 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D HCR03_12525 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D HCR03_05040 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D HCR03_10405 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D HCR03_19125 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D HCR03_10430 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D HCR03_12695 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D HCR03_01610 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D HCR03_06600 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D HCR03_10435 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D HCR03_10450 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D HCR03_10445 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D HCR03_10390 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D HCR03_10375 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D HCR03_06590 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D HCR03_03650 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D HCR03_06595 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D HCR03_06605 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D HCR03_12410 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D HCR03_10400 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D HCR03_10355 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D HCR03_10415 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D HCR03_10300 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D HCR03_10370 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D HCR03_03275 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D HCR03_02070 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D HCR03_02800 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D HCR03_10425 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D HCR03_10440 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D HCR03_10395 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D HCR03_02790 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D HCR03_03485 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D HCR03_10410 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D HCR03_10360 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D HCR03_03035 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D HCR03_03495 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D HCR03_06620 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D HCR03_02065 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D HCR03_10325 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D HCR03_12340 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HCR03_04475 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:cfem00970] D HCR03_00705 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HCR03_14180 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HCR03_04840 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HCR03_12345 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HCR03_15705 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HCR03_16915 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HCR03_19210 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HCR03_13420 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HCR03_17460 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HCR03_15185 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HCR03_04470 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HCR03_04805 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HCR03_15740 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HCR03_01405 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HCR03_03195 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HCR03_03180 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D HCR03_17470 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HCR03_16145 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HCR03_12185 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HCR03_04480 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HCR03_04815 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HCR03_15730 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HCR03_18085 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HCR03_03185 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HCR03_19165 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HCR03_17455 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HCR03_17465 tRNA-His K14226 tRNA-His; tRNA His D HCR03_04835 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HCR03_12350 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HCR03_15710 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HCR03_16920 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HCR03_18035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HCR03_03860 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HCR03_04820 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HCR03_15725 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HCR03_17475 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HCR03_04400 tRNA-Ile K14230 tRNA-Met; tRNA Met D HCR03_12180 tRNA-Met K14230 tRNA-Met; tRNA Met D HCR03_16675 tRNA-Met K14230 tRNA-Met; tRNA Met D HCR03_03190 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D HCR03_15690 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HCR03_16150 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HCR03_05440 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HCR03_08130 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HCR03_08125 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HCR03_15165 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HCR03_03580 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HCR03_15615 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HCR03_01400 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HCR03_01605 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D HCR03_15620 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D HCR03_07685 tRNA-Val K14237 tRNA-Val; tRNA Val D HCR03_03200 tRNA-Val K14237 tRNA-Val; tRNA Val D HCR03_12190 tRNA-Val K14237 tRNA-Val; tRNA Val D HCR03_04365 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HCR03_17165 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D HCR03_17160 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D HCR03_17170 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D HCR03_04360 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D HCR03_03725 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HCR03_03890 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HCR03_13250 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HCR03_17175 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HCR03_05530 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D HCR03_11410 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D HCR03_06520 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HCR03_12170 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HCR03_10590 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HCR03_16085 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HCR03_03400 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D HCR03_04885 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HCR03_02145 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HCR03_00820 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HCR03_11595 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HCR03_06640 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HCR03_10470 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HCR03_13240 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HCR03_00895 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HCR03_00890 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HCR03_02385 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HCR03_15920 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:cfem03060] D HCR03_03615 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D HCR03_05515 protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D HCR03_05510 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D HCR03_02685 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D HCR03_12130 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D HCR03_12590 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HCR03_05045 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HCR03_02115 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HCR03_03265 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D HCR03_03270 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D HCR03_00825 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:cfem04122] D HCR03_03670 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HCR03_12830 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HCR03_12655 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D HCR03_13695 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D HCR03_12835 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] C 03050 Proteasome C 03018 RNA degradation [PATH:cfem03018] D HCR03_09395 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HCR03_12530 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D HCR03_03610 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D HCR03_07510 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HCR03_08120 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D HCR03_06525 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D HCR03_03660 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D HCR03_06740 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D HCR03_05470 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HCR03_12755 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HCR03_01035 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] B B 09124 Replication and repair C 03030 DNA replication [PATH:cfem03030] D HCR03_05475 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HCR03_02235 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D HCR03_03870 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HCR03_12105 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HCR03_03645 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D HCR03_03020 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D HCR03_19130 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HCR03_03665 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D HCR03_03255 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D HCR03_13035 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D HCR03_02875 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:cfem03410] D HCR03_11690 DNA-3-methyladenine glycosylase 2 family protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D HCR03_03570 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D HCR03_13160 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D HCR03_13850 endonuclease VIII K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D HCR03_13580 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D HCR03_19085 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D HCR03_11900 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D HCR03_13035 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D HCR03_00930 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HCR03_02875 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:cfem03420] D HCR03_13385 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D HCR03_02305 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D HCR03_15100 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D HCR03_02300 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D HCR03_05010 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D HCR03_03970 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HCR03_13035 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D HCR03_02875 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:cfem03430] D HCR03_00770 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D HCR03_05060 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D HCR03_00780 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D HCR03_03970 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HCR03_02815 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D HCR03_02810 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D HCR03_00930 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HCR03_19130 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HCR03_05475 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HCR03_02235 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D HCR03_12105 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HCR03_03870 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HCR03_02875 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D HCR03_14230 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D HCR03_14810 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:cfem03440] D HCR03_00930 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HCR03_19130 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HCR03_12095 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D HCR03_05075 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D HCR03_06375 recR; recombination protein RecR K06187 recR; recombination protein RecR D HCR03_10620 recA; recombinase RecA K03553 recA; recombination protein RecA D HCR03_15070 recA; recombinase RecA K03553 recA; recombination protein RecA D HCR03_13035 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D HCR03_17390 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D HCR03_17395 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D HCR03_17385 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D HCR03_06545 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HCR03_02940 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D HCR03_05475 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HCR03_02235 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D HCR03_12105 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HCR03_03870 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HCR03_03410 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:cfem03450] D HCR03_07550 Ku protein K10979 ku; DNA end-binding protein Ku D HCR03_13605 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:cfem02010] D HCR03_08260 ATP-binding cassette domain-containing protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D HCR03_17040 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D HCR03_13680 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D HCR03_13675 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D HCR03_13670 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D HCR03_07105 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D HCR03_16185 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D HCR03_07110 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D HCR03_16190 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D HCR03_07115 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D HCR03_16195 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D HCR03_11860 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D HCR03_11855 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D HCR03_11850 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D HCR03_11630 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D HCR03_10880 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D HCR03_18305 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D HCR03_18500 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D HCR03_00015 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D HCR03_10885 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D HCR03_18490 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D HCR03_00020 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D HCR03_10890 ABC transporter permease subunit K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D HCR03_18495 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D HCR03_05715 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D HCR03_08050 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D HCR03_09795 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D HCR03_13750 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D HCR03_18260 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D HCR03_13645 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D HCR03_05710 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D HCR03_08055 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D HCR03_09790 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D HCR03_13650 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D HCR03_13755 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D HCR03_18255 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D HCR03_08060 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D HCR03_09785 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D HCR03_13655 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D HCR03_18250 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D HCR03_13760 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D HCR03_15750 carbohydrate ABC transporter substrate-binding protein K10192 togB; oligogalacturonide transport system substrate-binding protein D HCR03_15755 sugar ABC transporter permease K10193 togM; oligogalacturonide transport system permease protein D HCR03_15760 carbohydrate ABC transporter permease K10194 togN; oligogalacturonide transport system permease protein D HCR03_12260 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein D HCR03_16995 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein D HCR03_19025 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein D HCR03_12255 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein D HCR03_17005 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein D HCR03_19030 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein D HCR03_12250 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein D HCR03_17000 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein D HCR03_19035 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein D HCR03_05705 carbohydrate ABC transporter permease K10202 ngcG; N-acetylglucosamine transport system permease protein D HCR03_07255 sugar ABC transporter substrate-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein D HCR03_07250 sugar ABC transporter permease K17245 chiF; putative chitobiose transport system permease protein D HCR03_07245 carbohydrate ABC transporter permease K17246 chiG; putative chitobiose transport system permease protein D HCR03_10120 sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein D HCR03_17810 sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein D HCR03_10130 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein D HCR03_17820 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein D HCR03_10125 sugar ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D HCR03_17815 sugar ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D HCR03_07905 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D HCR03_07915 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D HCR03_07910 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D HCR03_05930 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D HCR03_09640 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D HCR03_12300 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D HCR03_15260 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D HCR03_18170 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D HCR03_05925 ABC transporter permease K10440 rbsC; ribose transport system permease protein D HCR03_05935 ABC transporter permease K10440 rbsC; ribose transport system permease protein D HCR03_12295 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D HCR03_15265 ABC transporter permease K10440 rbsC; ribose transport system permease protein D HCR03_18165 hypothetical protein K10440 rbsC; ribose transport system permease protein D HCR03_18175 ABC transporter permease K10440 rbsC; ribose transport system permease protein D HCR03_09630 ABC transporter permease K10440 rbsC; ribose transport system permease protein D HCR03_09635 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D HCR03_05920 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D HCR03_15270 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D HCR03_15275 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D HCR03_18180 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D HCR03_12275 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D HCR03_08080 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein D HCR03_08090 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein D HCR03_08095 sugar ABC transporter permease YjfF K23509 ytfT; galactofuranose transport system permease protein D HCR03_08085 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D HCR03_01460 galactose ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D HCR03_01490 mglB; galactose/glucose ABC transporter substrate-binding protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein D HCR03_01480 mglC; galactose/methyl galactoside ABC transporter permease MglC K10541 mglC; methyl-galactoside transport system permease protein D HCR03_01485 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D HCR03_01065 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D HCR03_09705 extracellular solute-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D HCR03_17570 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D HCR03_01055 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D HCR03_09695 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D HCR03_17575 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D HCR03_01060 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D HCR03_09700 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D HCR03_17580 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D HCR03_01050 ATP-binding cassette domain-containing protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D HCR03_12795 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D HCR03_12805 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D HCR03_01720 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D HCR03_02760 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D HCR03_02755 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein D HCR03_02750 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D HCR03_00295 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D HCR03_00245 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D HCR03_00250 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D HCR03_00255 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D HCR03_00260 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D HCR03_00265 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D HCR03_09950 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D HCR03_09935 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D HCR03_09930 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D HCR03_01320 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HCR03_06805 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HCR03_00370 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HCR03_01340 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D HCR03_01335 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D HCR03_00380 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D HCR03_01330 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D HCR03_18340 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D HCR03_00385 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D HCR03_01325 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D HCR03_00390 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D HCR03_14595 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D HCR03_17255 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D HCR03_17885 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D HCR03_14605 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D HCR03_17245 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D HCR03_17875 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D HCR03_14600 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D HCR03_17250 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D HCR03_17880 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D HCR03_12400 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D HCR03_05560 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D HCR03_17425 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D HCR03_17415 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D HCR03_17420 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D HCR03_10775 substrate-binding domain-containing protein K10555 lsrB; AI-2 transport system substrate-binding protein D HCR03_10785 ABC transporter permease K10556 lsrC; AI-2 transport system permease protein D HCR03_10780 ABC transporter permease K10557 lsrD; AI-2 transport system permease protein D HCR03_10790 sugar ABC transporter ATP-binding protein K10558 lsrA; AI-2 transport system ATP-binding protein D HCR03_06785 ABC transporter permease K11051 cylB; multidrug/hemolysin transport system permease protein D HCR03_06790 ABC transporter ATP-binding protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein D HCR03_09540 ABC transporter permease K09692 tagG; teichoic acid transport system permease protein D HCR03_09545 ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4] D HCR03_05985 ABC transporter permease K19310 bcrB; bacitracin transport system permease protein D HCR03_05990 ABC transporter permease K19310 bcrB; bacitracin transport system permease protein D HCR03_06010 ABC transporter permease K19310 bcrB; bacitracin transport system permease protein D HCR03_06015 ABC transporter permease K19310 bcrB; bacitracin transport system permease protein D HCR03_13805 ABC transporter permease K19310 bcrB; bacitracin transport system permease protein D HCR03_13810 ABC transporter permease K19310 bcrB; bacitracin transport system permease protein D HCR03_05995 ABC transporter ATP-binding protein K19309 bcrA; bacitracin transport system ATP-binding protein D HCR03_06020 ABC transporter ATP-binding protein K19309 bcrA; bacitracin transport system ATP-binding protein D HCR03_13815 ABC transporter ATP-binding protein K19309 bcrA; bacitracin transport system ATP-binding protein D HCR03_18825 ABC transporter permease K20461 nukG; lantibiotic transport system permease protein D HCR03_13785 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein D HCR03_13780 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein D HCR03_13790 lantibiotic protection ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein D HCR03_11615 ABC transporter permease K09811 ftsX; cell division transport system permease protein D HCR03_11620 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D HCR03_15385 ABC transporter permease K16919 ytrC_D; acetoin utilization transport system permease protein D HCR03_15380 ABC transporter ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein D HCR03_05550 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D HCR03_13870 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D HCR03_13890 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D HCR03_18840 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D HCR03_05545 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D HCR03_13865 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D HCR03_13955 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D HCR03_18835 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D HCR03_07370 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D HCR03_19005 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D HCR03_07375 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D HCR03_19010 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D HCR03_11505 abc-f; ABC-F type ribosomal protection protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:cfem02060] D HCR03_07580 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D HCR03_08815 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D HCR03_08885 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D HCR03_09415 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D HCR03_16065 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D HCR03_00110 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D HCR03_00645 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D HCR03_02175 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HCR03_05015 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HCR03_07585 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HCR03_08820 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HCR03_08880 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HCR03_09420 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HCR03_09865 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HCR03_16070 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HCR03_00105 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HCR03_00615 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HCR03_08875 PTS transporter subunit EIIC K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D HCR03_05575 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HCR03_08865 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HCR03_10010 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HCR03_05580 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D HCR03_10005 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D HCR03_08845 PTS transporter subunit EIIC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D HCR03_07595 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197] D HCR03_07605 PTS mannitol transporter subunit IICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D HCR03_09825 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D HCR03_09840 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component D HCR03_09835 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component D HCR03_16050 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D HCR03_00130 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D HCR03_00620 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D HCR03_16055 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D HCR03_00125 PTS lactose transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D HCR03_00625 PTS fructose transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D HCR03_16060 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component D HCR03_00120 PTS maltose transporter subunit IIABC K02775 gatC; galactitol PTS system EIIC component D HCR03_00630 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component D HCR03_09425 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D HCR03_09430 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D HCR03_08830 PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D HCR03_08825 PTS sugar transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D HCR03_08835 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D HCR03_10685 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:cfem03070] D HCR03_05515 protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D HCR03_05510 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D HCR03_03615 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D HCR03_02685 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D HCR03_12130 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D HCR03_12590 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HCR03_02115 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HCR03_05045 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HCR03_04725 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D HCR03_08435 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D HCR03_14485 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D HCR03_15040 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D HCR03_16495 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D HCR03_19440 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:cfem02020] D HCR03_01735 HAMP domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D HCR03_13920 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D HCR03_01730 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D HCR03_12795 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D HCR03_11575 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D HCR03_12855 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D HCR03_09380 flagellin K02406 fliC; flagellin D HCR03_09220 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D HCR03_09275 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D HCR03_05975 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D HCR03_05970 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D HCR03_17150 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D HCR03_17145 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D HCR03_03305 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D HCR03_17140 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D HCR03_12110 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HCR03_08600 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D HCR03_08605 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export D HCR03_08610 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D HCR03_08615 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein D HCR03_17600 HAMP domain-containing histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D HCR03_19265 HAMP domain-containing histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D HCR03_17595 vanR; VanR-ABDEGLN family response regulator transcription factor K18349 vanRC; two-component system, OmpR family, response regulator VanR D HCR03_19270 vanR; VanR-ABDEGLN family response regulator transcription factor K18349 vanRC; two-component system, OmpR family, response regulator VanR D HCR03_03040 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D HCR03_04370 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D HCR03_19250 vanG; D-alanine--D-serine ligase VanG K18856 vanC; D-alanine---D-serine ligase [EC:6.3.2.35] D HCR03_19245 D-alanyl-D-alanine carboxypeptidase family protein K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14] D HCR03_19240 vanT; serine racemase VanT catalytic subunit K18348 vanT; serine/alanine racemase [EC:5.1.1.18 5.1.1.1] D HCR03_06575 HAMP domain-containing protein K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D HCR03_10170 HAMP domain-containing histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D HCR03_06580 response regulator transcription factor K18941 arlR; two-component system, OmpR family, response regulator ArlR D HCR03_10175 response regulator transcription factor K18941 arlR; two-component system, OmpR family, response regulator ArlR D HCR03_05855 HAMP domain-containing histidine kinase K18986 ihk; two-component system, OmpR family, sensor kinase Ihk [EC:2.7.13.3] D HCR03_13765 HAMP domain-containing histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D HCR03_13770 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR D HCR03_13790 lantibiotic protection ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein D HCR03_13785 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein D HCR03_13780 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein D HCR03_16990 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D HCR03_15810 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D HCR03_09375 carbon storage regulator K03563 csrA; carbon storage regulator D HCR03_04575 pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D HCR03_14860 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D HCR03_04585 type II/IV secretion system ATPase subunit K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HCR03_08510 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HCR03_14305 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HCR03_14870 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HCR03_06775 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D HCR03_08035 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D HCR03_02390 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCR03_15470 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCR03_15540 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCR03_03715 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HCR03_18520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HCR03_15990 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D HCR03_09140 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D HCR03_01455 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_07775 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_09130 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_09175 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_09400 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_09405 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_10530 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_11090 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_16755 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_16870 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_16975 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_09160 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D HCR03_09170 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D HCR03_09145 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D HCR03_09255 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D HCR03_09135 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D HCR03_07875 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D HCR03_16880 ATP-binding protein K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3] D HCR03_16875 DNA-binding domain-containing protein K07719 glnL; two-component system, response regulator GlnL D HCR03_01470 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D HCR03_05720 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D HCR03_09780 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D HCR03_13635 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D HCR03_13745 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D HCR03_19015 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D HCR03_01475 response regulator K07720 yesN; two-component system, response regulator YesN D HCR03_09775 response regulator K07720 yesN; two-component system, response regulator YesN D HCR03_13640 response regulator K07720 yesN; two-component system, response regulator YesN D HCR03_15285 response regulator K07720 yesN; two-component system, response regulator YesN D HCR03_16205 response regulator K07720 yesN; two-component system, response regulator YesN D HCR03_18275 response regulator K07720 yesN; two-component system, response regulator YesN D HCR03_19020 response regulator K07720 yesN; two-component system, response regulator YesN D HCR03_13740 helix-turn-helix domain-containing protein K07720 yesN; two-component system, response regulator YesN D HCR03_09345 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:cfem02024] D HCR03_02740 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D HCR03_00485 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D HCR03_05970 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D HCR03_10775 substrate-binding domain-containing protein K10555 lsrB; AI-2 transport system substrate-binding protein D HCR03_10785 ABC transporter permease K10556 lsrC; AI-2 transport system permease protein D HCR03_10780 ABC transporter permease K10557 lsrD; AI-2 transport system permease protein D HCR03_10790 sugar ABC transporter ATP-binding protein K10558 lsrA; AI-2 transport system ATP-binding protein D HCR03_10800 lsrK; autoinducer-2 kinase K11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189] D HCR03_10795 sugar-binding transcriptional regulator K11531 lsrR; lsr operon transcriptional repressor D HCR03_10770 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245] D HCR03_00245 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D HCR03_00250 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D HCR03_00255 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D HCR03_00260 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D HCR03_00265 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D HCR03_07875 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D HCR03_05820 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D HCR03_00290 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D HCR03_01320 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HCR03_06805 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HCR03_00370 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HCR03_01340 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D HCR03_01335 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D HCR03_00380 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D HCR03_01330 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D HCR03_18340 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D HCR03_00385 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D HCR03_01325 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D HCR03_00390 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D HCR03_07360 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D HCR03_15305 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D HCR03_18325 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D HCR03_01685 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D HCR03_01690 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D HCR03_07340 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D HCR03_12820 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D HCR03_15310 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D HCR03_18330 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D HCR03_00375 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D HCR03_01695 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D HCR03_07335 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D HCR03_12815 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D HCR03_18335 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D HCR03_07350 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D HCR03_15320 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D HCR03_01700 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D HCR03_01705 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D HCR03_15325 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D HCR03_18345 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D HCR03_12130 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D HCR03_03615 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D HCR03_02685 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D HCR03_12590 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HCR03_02115 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HCR03_05045 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HCR03_16990 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D HCR03_13765 HAMP domain-containing histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D HCR03_13770 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR D HCR03_13790 lantibiotic protection ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein D HCR03_13785 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein D HCR03_13780 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:cfem02030] D HCR03_01455 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_07775 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_09130 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_09175 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_09400 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_09405 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_10530 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_11090 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_16755 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_16870 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_16975 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_05930 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D HCR03_09640 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D HCR03_12300 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D HCR03_15260 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D HCR03_18170 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D HCR03_01460 galactose ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D HCR03_01490 mglB; galactose/glucose ABC transporter substrate-binding protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein D HCR03_09145 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D HCR03_09160 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D HCR03_09170 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D HCR03_09255 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D HCR03_04285 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC D HCR03_09200 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC D HCR03_09135 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D HCR03_09195 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D HCR03_09140 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D HCR03_09320 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D HCR03_09265 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D HCR03_09260 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN D HCR03_09275 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D HCR03_09270 OmpA family protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:cfem02040] D HCR03_09330 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D HCR03_09320 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D HCR03_09315 hypothetical protein K02411 fliH; flagellar assembly protein FliH D HCR03_09310 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D HCR03_09305 flagellar FliJ family protein K02413 fliJ; flagellar protein FliJ D HCR03_09265 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D HCR03_09260 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN D HCR03_09250 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D HCR03_09245 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D HCR03_09240 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D HCR03_09235 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D HCR03_09225 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D HCR03_09230 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D HCR03_09340 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D HCR03_09335 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D HCR03_09295 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD D HCR03_09285 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE D HCR03_09215 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF D HCR03_09210 flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG D HCR03_09355 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D HCR03_09360 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D HCR03_09380 flagellin K02406 fliC; flagellin D HCR03_09180 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D HCR03_09185 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D HCR03_09275 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D HCR03_09270 OmpA family protein K02557 motB; chemotaxis protein MotB D HCR03_09345 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D HCR03_03015 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D HCR03_15990 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D HCR03_09220 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D HCR03_09395 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D HCR03_03065 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:cfem01501] D HCR03_06680 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D HCR03_18160 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D HCR03_00330 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D HCR03_01320 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HCR03_06805 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HCR03_00370 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HCR03_01340 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D HCR03_01335 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D HCR03_00380 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D HCR03_01330 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D HCR03_18340 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D HCR03_00385 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D HCR03_01325 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D HCR03_00390 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D HCR03_09090 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1 D HCR03_01205 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1 D HCR03_09445 DUF4825 domain-containing protein K02172 blaR1; bla regulator protein blaR1 D HCR03_09095 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D HCR03_09450 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D HCR03_01200 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D HCR03_05460 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HCR03_03895 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D HCR03_13225 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:cfem01502] D HCR03_17600 HAMP domain-containing histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D HCR03_19265 HAMP domain-containing histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D HCR03_17595 vanR; VanR-ABDEGLN family response regulator transcription factor K18349 vanRC; two-component system, OmpR family, response regulator VanR D HCR03_19270 vanR; VanR-ABDEGLN family response regulator transcription factor K18349 vanRC; two-component system, OmpR family, response regulator VanR D HCR03_06630 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HCR03_17940 hypothetical protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HCR03_15910 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D HCR03_04190 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D HCR03_04965 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HCR03_04955 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D HCR03_19245 D-alanyl-D-alanine carboxypeptidase family protein K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14] D HCR03_19250 vanG; D-alanine--D-serine ligase VanG K18856 vanC; D-alanine---D-serine ligase [EC:6.3.2.35] D HCR03_03040 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D HCR03_04370 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D HCR03_19240 vanT; serine racemase VanT catalytic subunit K18348 vanT; serine/alanine racemase [EC:5.1.1.18 5.1.1.1] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cfem01503] D HCR03_02620 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D HCR03_07990 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D HCR03_11575 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D HCR03_12855 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D HCR03_08600 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D HCR03_08605 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export D HCR03_08610 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D HCR03_08615 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:cfem01000] C 01001 Protein kinases [BR:cfem01001] D HCR03_03375 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D HCR03_01735 HAMP domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D HCR03_13920 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D HCR03_05975 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D HCR03_17600 HAMP domain-containing histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D HCR03_19265 HAMP domain-containing histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D HCR03_06575 HAMP domain-containing protein K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D HCR03_10170 HAMP domain-containing histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D HCR03_05855 HAMP domain-containing histidine kinase K18986 ihk; two-component system, OmpR family, sensor kinase Ihk [EC:2.7.13.3] D HCR03_13765 HAMP domain-containing histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D HCR03_09145 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D HCR03_16880 ATP-binding protein K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3] D HCR03_01470 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D HCR03_05720 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D HCR03_09780 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D HCR03_13635 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D HCR03_13745 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D HCR03_19015 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:cfem01009] D HCR03_05470 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HCR03_04920 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D HCR03_03380 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:cfem01002] D HCR03_00825 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D HCR03_08490 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D HCR03_14855 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D HCR03_12700 GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78] D HCR03_01410 sigma-E processing peptidase SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-] D HCR03_06045 pcp; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D HCR03_02440 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D HCR03_02425 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D HCR03_07615 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HCR03_04015 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D HCR03_12670 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D HCR03_03915 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D HCR03_03790 choloylglycine hydrolase family protein K24041 yxeI; penicillin V amidase [EC:3.5.1.11] D HCR03_16905 srtB; class B sortase K08600 srtB; sortase B [EC:3.4.22.71] D HCR03_18130 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D HCR03_15205 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D HCR03_10680 peptidoglycan-binding protein K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11] D HCR03_03040 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D HCR03_04370 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D HCR03_19245 D-alanyl-D-alanine carboxypeptidase family protein K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14] D HCR03_11770 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D HCR03_08145 Sapep family Mn(2+)-dependent dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D HCR03_17185 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D HCR03_07325 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B D HCR03_07330 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B D HCR03_18040 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D HCR03_10340 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D HCR03_08165 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D HCR03_03765 beta-aspartyl-peptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-] D HCR03_03630 ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D HCR03_10760 M42 family metallopeptidase K01269 yhfE; aminopeptidase [EC:3.4.11.-] D HCR03_03325 peptidase M50 K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-] D HCR03_02225 site-2 protease family protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D HCR03_18590 M55 family metallopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-] D HCR03_09090 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1 D HCR03_01205 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1 D HCR03_09445 DUF4825 domain-containing protein K02172 blaR1; bla regulator protein blaR1 D HCR03_11575 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D HCR03_12855 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D HCR03_03455 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D HCR03_03515 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D HCR03_06570 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D HCR03_19235 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D HCR03_19260 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D HCR03_03230 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D HCR03_04110 Clp protease ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D HCR03_03220 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D HCR03_17365 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D HCR03_03265 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D HCR03_03270 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D HCR03_11605 PDZ domain-containing protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D HCR03_00045 Type 1 glutamine amidotransferase-like domain-containing protein K05995 pepE; dipeptidase E [EC:3.4.13.21] D HCR03_03760 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6] D HCR03_16985 spoIVB; SpoIVB peptidase K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116] D HCR03_18580 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D HCR03_03900 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D HCR03_11455 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] C 01003 Glycosyltransferases [BR:cfem01003] D HCR03_09565 glycosyltransferase family 2 protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D HCR03_06685 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D HCR03_05460 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HCR03_01670 glycosyltransferase family 4 protein K20999 pslF; polysaccharide biosynthesis protein PslF C 01005 Lipopolysaccharide biosynthesis proteins [BR:cfem01005] D HCR03_09590 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D HCR03_15290 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D HCR03_07810 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D HCR03_13350 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cfem01011] D HCR03_02730 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HCR03_04950 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HCR03_05495 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HCR03_02310 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D HCR03_10985 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HCR03_06630 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HCR03_17940 hypothetical protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HCR03_15910 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D HCR03_18580 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D HCR03_04965 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HCR03_04955 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D HCR03_01900 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HCR03_16360 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HCR03_18460 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D HCR03_07630 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D HCR03_07970 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D HCR03_15415 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D HCR03_05460 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HCR03_03895 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D HCR03_13225 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D HCR03_04975 PASTA domain-containing protein K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D HCR03_15900 penicillin-binding protein K05364 pbpA; penicillin-binding protein A D HCR03_03455 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D HCR03_03515 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D HCR03_06570 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D HCR03_19235 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D HCR03_19260 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D HCR03_03040 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D HCR03_04370 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D HCR03_19245 D-alanyl-D-alanine carboxypeptidase family protein K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14] D HCR03_18040 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D HCR03_16905 srtB; class B sortase K08600 srtB; sortase B [EC:3.4.22.71] D HCR03_03905 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D HCR03_09060 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D HCR03_12335 sleB; spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D HCR03_06720 spoIID; stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D HCR03_02620 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D HCR03_07990 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:cfem01004] D HCR03_01275 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D HCR03_01260 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D HCR03_01290 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HCR03_01280 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HCR03_13110 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HCR03_01300 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D HCR03_01270 fabK; enoyl-[acyl-carrier-protein] reductase FabK K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D HCR03_03820 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D HCR03_02095 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D HCR03_03120 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D HCR03_07725 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D HCR03_07755 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D HCR03_02890 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:cfem01006] D HCR03_02805 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D HCR03_02210 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D HCR03_06495 undecaprenyl diphosphate synthase family protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D HCR03_00785 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D HCR03_05650 UbiA family prenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:cfem01007] D HCR03_04365 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HCR03_04360 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D HCR03_02385 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HCR03_15920 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D HCR03_10590 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HCR03_06640 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HCR03_16085 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HCR03_00820 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HCR03_04885 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HCR03_02145 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HCR03_11595 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HCR03_13250 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HCR03_17175 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HCR03_05530 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D HCR03_13240 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HCR03_11410 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D HCR03_12170 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HCR03_10470 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HCR03_06520 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HCR03_03725 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HCR03_03890 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HCR03_00895 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HCR03_00890 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HCR03_02405 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D HCR03_02030 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10907 K10907; aminotransferase [EC:2.6.1.-] D HCR03_07320 pyridoxal phosphate-dependent aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-] D HCR03_02255 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D HCR03_11015 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D HCR03_06825 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21] D HCR03_07130 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HCR03_10285 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D HCR03_07275 DegT/DnrJ/EryC1/StrS family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:cfem03000] D HCR03_14375 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HCR03_14935 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HCR03_12390 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator D HCR03_15995 DeoR/GlpR transcriptional regulator K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D HCR03_08840 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D HCR03_09480 spoIIID; sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D D HCR03_05810 DeoR/GlpR transcriptional regulator K06608 iolR; DeoR family transcriptional regulator, myo-inositol catabolism operon repressor D HCR03_03290 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D HCR03_05735 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D HCR03_07890 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D HCR03_08915 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D HCR03_12280 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D HCR03_17010 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D HCR03_17060 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D HCR03_18310 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D HCR03_03950 LacI family DNA-binding transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D HCR03_10715 LacI family DNA-binding transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D HCR03_10135 GntR family transcriptional regulator K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor D HCR03_07440 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D HCR03_02545 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D HCR03_01525 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D HCR03_15300 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D HCR03_18960 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D HCR03_17190 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D HCR03_13730 TetR family transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D HCR03_09475 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D HCR03_14615 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D HCR03_17240 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D HCR03_17870 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D HCR03_17215 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D HCR03_18515 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D HCR03_07875 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D HCR03_09070 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D HCR03_13625 winged helix-turn-helix transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D HCR03_13595 winged helix-turn-helix transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D HCR03_06395 winged helix-turn-helix transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons D HCR03_08910 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D HCR03_10660 helix-turn-helix transcriptional regulator K10947 K10947; PadR family transcriptional regulator D HCR03_12975 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D HCR03_00745 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D HCR03_13930 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D HCR03_08170 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D HCR03_18880 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D HCR03_07780 DtxR family transcriptional regulator K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D HCR03_08855 MurR/RpiR family transcriptional regulator K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator D HCR03_09095 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D HCR03_09450 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D HCR03_01200 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D HCR03_04325 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D HCR03_16810 TrmB family transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D HCR03_15455 helix-turn-helix domain-containing protein K02647 cdaR; carbohydrate diacid regulator D HCR03_15605 helix-turn-helix domain-containing protein K02647 cdaR; carbohydrate diacid regulator D HCR03_11625 helix-turn-helix domain-containing protein K02647 cdaR; carbohydrate diacid regulator D HCR03_01925 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D HCR03_03745 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D HCR03_04785 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D HCR03_08575 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D HCR03_14500 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D HCR03_14660 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D HCR03_15120 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D HCR03_19285 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D HCR03_08200 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D HCR03_10465 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D HCR03_18795 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D HCR03_08870 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator D HCR03_10000 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator D HCR03_05585 PRD domain-containing protein K03480 glcT; transcriptional antiterminator D HCR03_07600 BglG family transcription antiterminator K03483 mtlR; mannitol operon transcriptional activator D HCR03_08580 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D HCR03_17290 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D HCR03_12475 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D HCR03_04495 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCR03_06225 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCR03_08285 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCR03_12155 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCR03_12165 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCR03_16535 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCR03_19475 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCR03_15090 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D HCR03_02375 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D HCR03_12745 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D HCR03_10795 sugar-binding transcriptional regulator K11531 lsrR; lsr operon transcriptional repressor D HCR03_02195 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D HCR03_04990 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:cfem03021] D HCR03_10305 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HCR03_03005 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HCR03_03000 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HCR03_03415 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D HCR03_03015 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D HCR03_16335 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D HCR03_06550 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D HCR03_07380 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D HCR03_07950 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D HCR03_08955 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D HCR03_11080 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D HCR03_11210 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D HCR03_16555 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D HCR03_19230 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D HCR03_16580 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D HCR03_05365 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D HCR03_01415 sigE; RNA polymerase sporulation sigma factor SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D HCR03_01430 sigG; RNA polymerase sporulation sigma factor SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D HCR03_04855 sigma-70 family RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D HCR03_08195 sigK; RNA polymerase sporulation sigma factor SigK K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D HCR03_18600 sigma-70 family RNA polymerase sigma factor K27000 sigH; RNA polymerase sigma-H factor D HCR03_04455 RNA polymerase subunit sigma K03093 sigI; RNA polymerase sigma-I factor D HCR03_15990 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D HCR03_09220 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D HCR03_12485 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D HCR03_02825 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D HCR03_06610 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D HCR03_11600 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA C 03019 Messenger RNA biogenesis [BR:cfem03019] D HCR03_02100 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HCR03_03660 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D HCR03_06740 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D HCR03_06525 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D HCR03_03610 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D HCR03_07510 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HCR03_08120 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D HCR03_09395 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HCR03_12530 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D HCR03_05470 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HCR03_12755 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HCR03_01035 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HCR03_09375 carbon storage regulator K03563 csrA; carbon storage regulator D HCR03_05490 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:cfem03011] D HCR03_01815 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D HCR03_01440 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D HCR03_10420 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D HCR03_10310 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D HCR03_10365 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D HCR03_19135 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D HCR03_02990 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D HCR03_10380 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D HCR03_12415 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D HCR03_10455 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D HCR03_10315 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D HCR03_02995 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D HCR03_10320 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D HCR03_10385 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D HCR03_12525 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D HCR03_05040 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D HCR03_10405 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D HCR03_19125 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D HCR03_10430 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D HCR03_12695 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D HCR03_01610 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D HCR03_06600 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D HCR03_10435 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D HCR03_10450 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D HCR03_10445 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D HCR03_10390 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D HCR03_10375 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D HCR03_03650 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D HCR03_06595 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D HCR03_06605 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D HCR03_06590 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D HCR03_12410 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D HCR03_10400 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D HCR03_10355 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D HCR03_10415 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D HCR03_10300 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D HCR03_10370 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D HCR03_03275 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D HCR03_02070 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D HCR03_02800 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D HCR03_10425 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D HCR03_10440 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D HCR03_10395 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D HCR03_02790 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D HCR03_03485 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D HCR03_10410 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D HCR03_10360 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D HCR03_03035 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D HCR03_03495 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D HCR03_06620 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D HCR03_02065 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D HCR03_10325 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D HCR03_04475 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HCR03_12340 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA C 03009 Ribosome biogenesis [BR:cfem03009] D HCR03_02100 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HCR03_05085 era; GTPase Era K03595 era; GTPase D HCR03_02785 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D HCR03_12485 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D HCR03_02825 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D HCR03_06610 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D HCR03_11635 rRNA pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D HCR03_06655 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D HCR03_03390 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D HCR03_05005 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D HCR03_12150 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D HCR03_13300 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D HCR03_02365 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D HCR03_13040 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D HCR03_11685 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D HCR03_02720 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D HCR03_09055 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D HCR03_17405 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D HCR03_03385 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D HCR03_15875 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D HCR03_03450 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D HCR03_00830 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D HCR03_02765 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D HCR03_13050 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D HCR03_12810 GNAT family N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D HCR03_05025 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D HCR03_10605 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D HCR03_10535 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D HCR03_10240 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D HCR03_02780 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D HCR03_07510 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HCR03_03370 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D HCR03_03490 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D HCR03_03260 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A D HCR03_11095 hflX; GTPase HflX K03665 hflX; GTPase D HCR03_04310 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D HCR03_00935 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D HCR03_12505 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D HCR03_12480 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D HCR03_12100 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein D HCR03_02140 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D HCR03_05090 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D HCR03_02125 YhbY family RNA-binding protein K07574 yhbY; RNA-binding protein D HCR03_01010 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D HCR03_11895 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D HCR03_03500 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:cfem03016] D HCR03_01425 HD domain-containing protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D HCR03_04365 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HCR03_10470 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HCR03_00820 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HCR03_02145 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HCR03_16085 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HCR03_04360 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D HCR03_06640 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HCR03_11595 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HCR03_13250 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HCR03_17175 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HCR03_03725 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HCR03_03890 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HCR03_05530 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D HCR03_11410 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D HCR03_06520 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HCR03_12170 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HCR03_10590 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HCR03_04885 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HCR03_13240 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HCR03_00895 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HCR03_00890 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HCR03_02385 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HCR03_15920 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D HCR03_03885 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D HCR03_17430 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D HCR03_12515 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D HCR03_03670 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HCR03_12830 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HCR03_04310 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D HCR03_00785 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D HCR03_12140 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D HCR03_12145 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D HCR03_12120 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D HCR03_09460 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D HCR03_10580 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D HCR03_15210 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D HCR03_13020 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D HCR03_00760 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D HCR03_02170 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D HCR03_05330 methyltransferase domain-containing protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D HCR03_02090 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D HCR03_05020 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D HCR03_04260 SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D HCR03_06755 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D HCR03_02075 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D HCR03_12655 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D HCR03_03105 tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D HCR03_02695 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D HCR03_13260 epoxyqueuosine reductase QueH K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D HCR03_02690 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D HCR03_12835 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D HCR03_03640 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D HCR03_01865 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D HCR03_13060 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D HCR03_01870 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D HCR03_09085 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D HCR03_01955 nucleotidyltransferase family protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D HCR03_03610 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D HCR03_12530 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:cfem03012] D HCR03_12500 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D HCR03_02060 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D HCR03_02180 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D HCR03_01445 elongation factor Ts K02357 tsf; elongation factor Ts D HCR03_02980 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D HCR03_02985 fusA; elongation factor G K02355 fusA; elongation factor G D HCR03_11645 elongation factor G K02355 fusA; elongation factor G D HCR03_04315 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D HCR03_02205 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D HCR03_13390 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D HCR03_10330 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D HCR03_01625 efp; elongation factor P K02356 efp; elongation factor P D HCR03_19150 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D HCR03_10200 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:cfem03110] D HCR03_05160 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D HCR03_17450 AAA family ATPase K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D HCR03_03225 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D HCR03_04920 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D HCR03_12755 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HCR03_01035 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HCR03_12760 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D HCR03_02915 J domain-containing protein K03686 dnaJ; molecular chaperone DnaJ D HCR03_12750 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D HCR03_19065 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D HCR03_19060 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D HCR03_01030 co-chaperone GroES K04078 groES; chaperonin GroES D HCR03_11575 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D HCR03_12855 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D HCR03_03630 ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D HCR03_07220 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D HCR03_01820 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D HCR03_19080 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D HCR03_13145 trxA; thioredoxin K03671 TXN; thioredoxin D HCR03_16815 trxA; thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:cfem04131] D HCR03_07545 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D HCR03_06705 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HCR03_07500 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D HCR03_03045 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HCR03_04920 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:cfem03051] D HCR03_04920 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:cfem03032] D HCR03_03665 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D HCR03_14375 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HCR03_14935 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HCR03_00970 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D HCR03_12110 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HCR03_03645 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D HCR03_19155 ATP-binding protein K02315 dnaC; DNA replication protein DnaC D HCR03_03020 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D HCR03_19130 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HCR03_05475 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HCR03_02235 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D HCR03_12105 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HCR03_03870 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HCR03_03255 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D HCR03_13035 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D HCR03_02875 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D HCR03_14230 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D HCR03_14810 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D HCR03_03620 topoisomerase IV K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HCR03_12065 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HCR03_03625 DNA topoisomerase K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HCR03_12075 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HCR03_02085 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D HCR03_16450 DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:cfem03036] D HCR03_14375 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HCR03_14935 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HCR03_02100 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D HCR03_07545 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D HCR03_00970 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D HCR03_12110 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HCR03_09475 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D HCR03_02110 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D HCR03_03475 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D HCR03_11620 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D HCR03_01895 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D HCR03_04980 hypothetical protein K03586 ftsL; cell division protein FtsL D HCR03_04945 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ D HCR03_04960 cell division protein FtsW K03588 ftsW; cell division protein FtsW D HCR03_11615 ABC transporter permease K09811 ftsX; cell division transport system permease protein D HCR03_04940 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HCR03_11450 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA D HCR03_02620 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D HCR03_07990 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D HCR03_13230 P-loop NTPase K03609 minD; septum site-determining protein MinD D HCR03_00815 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein D HCR03_00805 cell division protein SepF K09772 sepF; cell division inhibitor SepF D HCR03_11475 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D HCR03_13210 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D HCR03_01880 FtsW/RodA/SpoVE family cell cycle protein K05837 rodA; rod shape determining protein RodA D HCR03_04490 ParA family protein K03496 parA; chromosome partitioning protein D HCR03_06235 ParA family protein K03496 parA; chromosome partitioning protein D HCR03_08280 ParA family protein K03496 parA; chromosome partitioning protein D HCR03_12160 ParA family protein K03496 parA; chromosome partitioning protein D HCR03_13175 ParA family protein K03496 parA; chromosome partitioning protein D HCR03_16540 ParA family protein K03496 parA; chromosome partitioning protein D HCR03_19480 ParA family protein K03496 parA; chromosome partitioning protein D HCR03_04495 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCR03_06225 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCR03_08285 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCR03_12155 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCR03_12165 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCR03_16535 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCR03_19475 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCR03_12145 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D HCR03_12150 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D HCR03_02090 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D HCR03_02655 tyrosine recombinase K04763 xerD; integrase/recombinase XerD D HCR03_17950 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD D HCR03_17500 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D HCR03_09495 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D HCR03_00090 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D HCR03_19485 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D HCR03_03215 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein D HCR03_05485 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:cfem03400] D HCR03_13160 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D HCR03_11690 DNA-3-methyladenine glycosylase 2 family protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D HCR03_03570 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D HCR03_12460 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D HCR03_11460 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D HCR03_13580 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D HCR03_13850 endonuclease VIII K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D HCR03_19085 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D HCR03_11900 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D HCR03_00930 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HCR03_02875 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D HCR03_13035 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D HCR03_02305 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D HCR03_15100 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D HCR03_02300 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D HCR03_05010 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D HCR03_03970 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HCR03_03005 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HCR03_03000 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HCR03_10305 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HCR03_03415 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D HCR03_13385 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D HCR03_00770 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D HCR03_05060 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D HCR03_00780 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D HCR03_02815 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D HCR03_02810 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D HCR03_05475 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HCR03_02235 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D HCR03_12105 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HCR03_03870 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HCR03_19130 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HCR03_14230 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D HCR03_14810 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D HCR03_02940 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D HCR03_10620 recA; recombinase RecA K03553 recA; recombination protein RecA D HCR03_15070 recA; recombinase RecA K03553 recA; recombination protein RecA D HCR03_17390 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D HCR03_17395 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D HCR03_17385 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D HCR03_03410 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D HCR03_09110 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50 D HCR03_09105 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D HCR03_02625 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D HCR03_12095 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D HCR03_06545 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HCR03_05075 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D HCR03_06375 recR; recombination protein RecR K06187 recR; recombination protein RecR D HCR03_02380 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D HCR03_02055 addA; helicase-exonuclease AddAB subunit AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D HCR03_02050 PD-(D/E)XK nuclease family protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D HCR03_13455 cas1c; type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D HCR03_07550 Ku protein K10979 ku; DNA end-binding protein Ku D HCR03_13605 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D HCR03_03620 topoisomerase IV K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HCR03_12065 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HCR03_03625 DNA topoisomerase K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HCR03_12075 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HCR03_02085 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D HCR03_00970 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D HCR03_08120 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D HCR03_01185 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D HCR03_04770 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D HCR03_08755 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D HCR03_08380 DNA methylase K03502 umuC; DNA polymerase V D HCR03_17365 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D HCR03_10615 regulatory protein RecX K03565 recX; regulatory protein D HCR03_08705 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D HCR03_14675 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D HCR03_15135 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D HCR03_12510 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:cfem03029] D HCR03_12500 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D HCR03_02060 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D HCR03_01445 elongation factor Ts K02357 tsf; elongation factor Ts D HCR03_02980 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D HCR03_02985 fusA; elongation factor G K02355 fusA; elongation factor G D HCR03_11645 elongation factor G K02355 fusA; elongation factor G D HCR03_05085 era; GTPase Era K03595 era; GTPase D HCR03_02385 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HCR03_02145 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HCR03_13250 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HCR03_17175 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HCR03_11410 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D HCR03_06640 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HCR03_17165 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D HCR03_17160 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D HCR03_17170 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D HCR03_19130 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HCR03_12755 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HCR03_12750 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D HCR03_01035 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HCR03_01030 co-chaperone GroES K04078 groES; chaperonin GroES D HCR03_12760 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D HCR03_02915 J domain-containing protein K03686 dnaJ; molecular chaperone DnaJ D HCR03_03670 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HCR03_12830 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HCR03_12130 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D HCR03_04920 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:cfem02000] D HCR03_05550 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D HCR03_13870 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D HCR03_13890 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D HCR03_18840 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D HCR03_05545 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D HCR03_13865 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D HCR03_13955 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D HCR03_18835 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D HCR03_07370 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D HCR03_19005 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D HCR03_07375 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D HCR03_19010 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D HCR03_02510 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D HCR03_10830 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D HCR03_19075 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D HCR03_11505 abc-f; ABC-F type ribosomal protection protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D HCR03_07150 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D HCR03_13680 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D HCR03_13675 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D HCR03_13670 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D HCR03_08260 ATP-binding cassette domain-containing protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D HCR03_17040 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D HCR03_07105 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D HCR03_16185 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D HCR03_07110 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D HCR03_16190 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D HCR03_07115 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D HCR03_16195 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D HCR03_11860 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D HCR03_11855 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D HCR03_11850 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D HCR03_05640 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D HCR03_11550 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D HCR03_01645 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein D HCR03_05630 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D HCR03_11555 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D HCR03_05635 ATP-binding cassette domain-containing protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D HCR03_11560 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D HCR03_11630 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D HCR03_08920 carbohydrate ABC transporter substrate-binding protein K25086 musE; maltose transport system substrate-binding protein D HCR03_08925 sugar ABC transporter permease K25087 musF; maltose transport system permease protein D HCR03_10700 sugar ABC transporter permease K25087 musF; maltose transport system permease protein D HCR03_08930 carbohydrate ABC transporter permease K25088 musG; maltose transport system permease protein D HCR03_10695 carbohydrate ABC transporter permease K25088 musG; maltose transport system permease protein D HCR03_10880 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D HCR03_18305 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D HCR03_18500 maltose ABC transporter substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D HCR03_00015 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D HCR03_10885 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D HCR03_18490 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D HCR03_00020 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D HCR03_10890 ABC transporter permease subunit K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D HCR03_18495 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D HCR03_05715 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D HCR03_08050 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D HCR03_09795 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D HCR03_13750 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D HCR03_18260 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D HCR03_13645 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D HCR03_05710 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D HCR03_08055 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D HCR03_09790 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D HCR03_13650 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D HCR03_13755 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D HCR03_18255 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D HCR03_08060 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D HCR03_09785 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D HCR03_13655 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D HCR03_18250 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D HCR03_13760 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D HCR03_05705 carbohydrate ABC transporter permease K10202 ngcG; N-acetylglucosamine transport system permease protein D HCR03_07255 sugar ABC transporter substrate-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein D HCR03_07250 sugar ABC transporter permease K17245 chiF; putative chitobiose transport system permease protein D HCR03_07245 carbohydrate ABC transporter permease K17246 chiG; putative chitobiose transport system permease protein D HCR03_15750 carbohydrate ABC transporter substrate-binding protein K10192 togB; oligogalacturonide transport system substrate-binding protein D HCR03_15755 sugar ABC transporter permease K10193 togM; oligogalacturonide transport system permease protein D HCR03_15760 carbohydrate ABC transporter permease K10194 togN; oligogalacturonide transport system permease protein D HCR03_12260 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein D HCR03_16995 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein D HCR03_19025 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein D HCR03_12255 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein D HCR03_17005 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein D HCR03_19030 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein D HCR03_12250 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein D HCR03_17000 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein D HCR03_19035 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein D HCR03_01460 galactose ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D HCR03_01490 mglB; galactose/glucose ABC transporter substrate-binding protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein D HCR03_01480 mglC; galactose/methyl galactoside ABC transporter permease MglC K10541 mglC; methyl-galactoside transport system permease protein D HCR03_01485 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D HCR03_10120 sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein D HCR03_17810 sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein D HCR03_10130 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein D HCR03_17820 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein D HCR03_10125 sugar ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D HCR03_17815 sugar ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D HCR03_05930 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D HCR03_09640 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D HCR03_12300 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D HCR03_15260 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein D HCR03_18170 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D HCR03_05925 ABC transporter permease K10440 rbsC; ribose transport system permease protein D HCR03_05935 ABC transporter permease K10440 rbsC; ribose transport system permease protein D HCR03_12295 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D HCR03_15265 ABC transporter permease K10440 rbsC; ribose transport system permease protein D HCR03_18165 hypothetical protein K10440 rbsC; ribose transport system permease protein D HCR03_18175 ABC transporter permease K10440 rbsC; ribose transport system permease protein D HCR03_09630 ABC transporter permease K10440 rbsC; ribose transport system permease protein D HCR03_09635 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D HCR03_05920 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D HCR03_15270 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D HCR03_15275 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D HCR03_18180 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D HCR03_08080 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein D HCR03_08090 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein D HCR03_08095 sugar ABC transporter permease YjfF K23509 ytfT; galactofuranose transport system permease protein D HCR03_08085 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D HCR03_01065 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D HCR03_09705 extracellular solute-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D HCR03_17570 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D HCR03_01055 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D HCR03_09695 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D HCR03_17575 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D HCR03_01060 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D HCR03_09700 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D HCR03_17580 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D HCR03_01050 ATP-binding cassette domain-containing protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D HCR03_07905 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D HCR03_07915 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D HCR03_07910 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D HCR03_16785 fetB; iron export ABC transporter permease subunit FetB K02069 STAR2; UDP-glucose/iron transport system permease protein D HCR03_16780 ATP-binding cassette domain-containing protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D HCR03_10775 substrate-binding domain-containing protein K10555 lsrB; AI-2 transport system substrate-binding protein D HCR03_10785 ABC transporter permease K10556 lsrC; AI-2 transport system permease protein D HCR03_10780 ABC transporter permease K10557 lsrD; AI-2 transport system permease protein D HCR03_10790 sugar ABC transporter ATP-binding protein K10558 lsrA; AI-2 transport system ATP-binding protein D HCR03_10040 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D HCR03_05755 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D HCR03_09660 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D HCR03_09875 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D HCR03_05750 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D HCR03_09665 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D HCR03_09880 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D HCR03_18295 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D HCR03_10045 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D HCR03_05745 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D HCR03_09670 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D HCR03_09885 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D HCR03_10050 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D HCR03_12795 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D HCR03_12805 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D HCR03_01720 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D HCR03_02760 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D HCR03_02755 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein D HCR03_02750 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D HCR03_00295 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D HCR03_00245 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D HCR03_00250 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D HCR03_00255 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D HCR03_00260 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D HCR03_00265 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D HCR03_09950 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D HCR03_09935 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D HCR03_09930 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D HCR03_05215 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D HCR03_05210 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein D HCR03_05205 ATP-binding cassette domain-containing protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D HCR03_08770 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D HCR03_00305 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D HCR03_08775 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D HCR03_00300 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D HCR03_08780 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D HCR03_01320 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HCR03_06805 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HCR03_00370 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D HCR03_01340 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D HCR03_01335 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D HCR03_00380 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D HCR03_01330 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D HCR03_18340 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D HCR03_00385 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D HCR03_01325 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D HCR03_00390 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein D HCR03_07360 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D HCR03_15305 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D HCR03_18325 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D HCR03_01685 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D HCR03_01690 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D HCR03_07340 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D HCR03_12820 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D HCR03_15310 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D HCR03_18330 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D HCR03_00375 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D HCR03_01695 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D HCR03_07335 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D HCR03_12815 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D HCR03_18335 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D HCR03_07350 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D HCR03_15320 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D HCR03_01700 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D HCR03_01705 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D HCR03_15325 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D HCR03_18345 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D HCR03_13900 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D HCR03_00660 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D HCR03_13905 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D HCR03_00665 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D HCR03_13910 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D HCR03_15180 peptidoglycan-binding protein K25034 btuF; cobalamin transport system substrate-binding protein D HCR03_14595 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D HCR03_17255 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D HCR03_17885 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D HCR03_14605 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D HCR03_17245 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D HCR03_17875 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D HCR03_14600 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D HCR03_17250 ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D HCR03_17880 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D HCR03_12400 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D HCR03_12310 ECF transporter S component K16923 qrtT; energy-coupling factor transport system substrate-specific component D HCR03_05565 MptD family putative ECF transporter S component K16926 htsT; energy-coupling factor transport system substrate-specific component D HCR03_03080 hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component D HCR03_05560 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D HCR03_17425 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D HCR03_17415 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D HCR03_17420 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D HCR03_05555 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D HCR03_06785 ABC transporter permease K11051 cylB; multidrug/hemolysin transport system permease protein D HCR03_06790 ABC transporter ATP-binding protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein D HCR03_09540 ABC transporter permease K09692 tagG; teichoic acid transport system permease protein D HCR03_09545 ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4] D HCR03_18825 ABC transporter permease K20461 nukG; lantibiotic transport system permease protein D HCR03_13785 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein D HCR03_13780 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein D HCR03_13790 lantibiotic protection ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein D HCR03_12035 ABC transporter permease subunit K25151 gldF; gliding motility-associated transport system permease protein D HCR03_12040 ATP-binding cassette domain-containing protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D HCR03_12030 GldG family protein K25153 gldG; gliding motility-associatede transport system auxiliary component D HCR03_05985 ABC transporter permease K19310 bcrB; bacitracin transport system permease protein D HCR03_05990 ABC transporter permease K19310 bcrB; bacitracin transport system permease protein D HCR03_06010 ABC transporter permease K19310 bcrB; bacitracin transport system permease protein D HCR03_06015 ABC transporter permease K19310 bcrB; bacitracin transport system permease protein D HCR03_13805 ABC transporter permease K19310 bcrB; bacitracin transport system permease protein D HCR03_13810 ABC transporter permease K19310 bcrB; bacitracin transport system permease protein D HCR03_05995 ABC transporter ATP-binding protein K19309 bcrA; bacitracin transport system ATP-binding protein D HCR03_06020 ABC transporter ATP-binding protein K19309 bcrA; bacitracin transport system ATP-binding protein D HCR03_13815 ABC transporter ATP-binding protein K19309 bcrA; bacitracin transport system ATP-binding protein D HCR03_15385 ABC transporter permease K16919 ytrC_D; acetoin utilization transport system permease protein D HCR03_15380 ABC transporter ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein D HCR03_11615 ABC transporter permease K09811 ftsX; cell division transport system permease protein D HCR03_11620 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D HCR03_01115 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D HCR03_01120 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D HCR03_01755 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D HCR03_07795 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D HCR03_11175 ABC-2 transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D HCR03_11180 ABC-2 transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D HCR03_18955 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D HCR03_01125 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HCR03_01750 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HCR03_01765 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HCR03_01780 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HCR03_07410 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HCR03_07790 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HCR03_08625 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HCR03_11170 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HCR03_13200 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HCR03_16175 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HCR03_16565 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HCR03_18950 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HCR03_12375 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HCR03_02635 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D HCR03_07670 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D HCR03_10160 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D HCR03_15955 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D HCR03_18100 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D HCR03_18890 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D HCR03_00080 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D HCR03_02505 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HCR03_07525 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HCR03_07665 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HCR03_10150 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HCR03_15950 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HCR03_18105 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HCR03_18895 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HCR03_00060 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HCR03_00075 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HCR03_12995 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HCR03_15570 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D HCR03_10055 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D HCR03_07850 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D HCR03_11945 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D HCR03_08190 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D HCR03_09065 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D HCR03_13940 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D HCR03_01375 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D HCR03_16830 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D HCR03_12325 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D HCR03_09750 MFS transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D HCR03_00550 MFS transporter K18214 tetP_A; MFS transporter, DHA3 family, tetracycline resistance protein D HCR03_07580 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D HCR03_08815 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D HCR03_08885 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D HCR03_09415 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D HCR03_16065 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D HCR03_00110 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D HCR03_00645 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D HCR03_02175 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HCR03_05015 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HCR03_07585 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HCR03_08820 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HCR03_08880 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HCR03_09420 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HCR03_09865 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HCR03_16070 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HCR03_00105 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HCR03_00615 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D HCR03_05575 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HCR03_08865 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HCR03_10010 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D HCR03_08875 PTS transporter subunit EIIC K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D HCR03_05580 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D HCR03_10005 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D HCR03_08845 PTS transporter subunit EIIC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D HCR03_08825 PTS sugar transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D HCR03_08830 PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D HCR03_07595 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197] D HCR03_07605 PTS mannitol transporter subunit IICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D HCR03_16050 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D HCR03_00130 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D HCR03_00620 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D HCR03_16055 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D HCR03_00125 PTS lactose transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D HCR03_00625 PTS fructose transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D HCR03_16060 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component D HCR03_00120 PTS maltose transporter subunit IIABC K02775 gatC; galactitol PTS system EIIC component D HCR03_00630 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component D HCR03_09825 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D HCR03_09840 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component D HCR03_09835 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component D HCR03_09425 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D HCR03_09430 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D HCR03_04755 ion transporter K10716 kch; voltage-gated potassium channel D HCR03_08040 ammonium transporter K03320 amt; ammonium transporter, Amt family D HCR03_15745 ammonium transporter K03320 amt; ammonium transporter, Amt family D HCR03_15820 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein D HCR03_09275 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D HCR03_09270 OmpA family protein K02557 motB; chemotaxis protein MotB D HCR03_04935 magnesium transporter CorA family protein K03284 corA; magnesium transporter D HCR03_16725 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter D HCR03_05615 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D HCR03_12880 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D HCR03_00710 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D HCR03_07445 amino acid permease K19540 frlA; fructoselysine transporter D HCR03_12595 endospore germination permease K06296 gerKB; spore germination protein KB D HCR03_12600 endospore germination permease K06296 gerKB; spore germination protein KB D HCR03_16365 EamA family transporter K08978 TC.BAT1; bacterial/archaeal transporter family protein D HCR03_00290 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D HCR03_11715 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D HCR03_15450 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D HCR03_18365 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease D HCR03_18995 L-lactate permease K03303 lutP; lactate permease D HCR03_16855 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D HCR03_18555 sodium:glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D HCR03_04270 cation:proton antiporter K26730 napA; Na+:H+ antiporter D HCR03_12890 cation transport protein K03498 trkH; trk/ktr system potassium uptake protein D HCR03_05950 NAD-binding protein K03499 trkA; trk/ktr system potassium uptake protein D HCR03_05955 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D HCR03_11780 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D HCR03_11785 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D HCR03_03550 uraA; uracil permease K02824 uraA; uracil permease D HCR03_13295 chloride channel protein K03281 clcA; chloride channel protein, CIC family D HCR03_15215 chromate transporter K07240 chrA; chromate transporter D HCR03_15220 chromate transporter K07240 chrA; chromate transporter D HCR03_00515 chromate transporter K07240 chrA; chromate transporter D HCR03_00520 chromate transporter K07240 chrA; chromate transporter D HCR03_05275 Nramp family divalent metal transporter K03322 mntH; manganese transport protein D HCR03_04895 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter D HCR03_00960 polysaccharide biosynthesis protein K06409 spoVB; stage V sporulation protein B D HCR03_10540 polysaccharide biosynthesis C-terminal domain-containing protein K06409 spoVB; stage V sporulation protein B D HCR03_09115 AEC family transporter K24180 mleP; malate permease and related proteins D HCR03_15815 AEC family transporter K24180 mleP; malate permease and related proteins D HCR03_17150 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D HCR03_17145 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D HCR03_03305 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D HCR03_17140 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D HCR03_02955 ECF transporter S component K23675 fmnP; riboflavin transporter D HCR03_11865 energy-coupled thiamine transporter ThiT K16789 thiT; thiamine transporter D HCR03_10210 hypothetical protein K16788 niaX; niacin transporter D HCR03_04960 cell division protein FtsW K03588 ftsW; cell division protein FtsW D HCR03_16825 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D HCR03_03975 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D HCR03_10480 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D HCR03_18535 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D HCR03_03435 oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D HCR03_03445 carboxyl transferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D HCR03_03440 biotin/lipoyl-binding protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D HCR03_18530 biotin/lipoyl-binding protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D HCR03_18525 OadG family protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D HCR03_13135 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein D HCR03_02630 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system D HCR03_15945 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system D HCR03_08010 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D HCR03_08015 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D HCR03_08800 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D HCR03_18470 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D HCR03_08005 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D HCR03_08795 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D HCR03_17275 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D HCR03_18465 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D HCR03_18875 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D HCR03_05145 tryptophan-rich sensory protein K05770 TSPO; translocator protein C 02044 Secretion system [BR:cfem02044] D HCR03_08490 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D HCR03_14855 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D HCR03_04575 pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D HCR03_14860 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D HCR03_04585 type II/IV secretion system ATPase subunit K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HCR03_08510 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HCR03_14305 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HCR03_14870 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HCR03_08525 secretion protein F K07333 flaJ; archaeal flagellar protein FlaJ D HCR03_14315 secretion protein F K07333 flaJ; archaeal flagellar protein FlaJ D HCR03_00835 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA D HCR03_06660 cytidine deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D HCR03_01215 MBL fold metallo-hydrolase K02238 comEC; competence protein ComEC D HCR03_01890 MBL fold metallo-hydrolase K02238 comEC; competence protein ComEC D HCR03_03875 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC D HCR03_04395 late competence development ComFB family protein K02241 comFB; competence protein ComFB D HCR03_14290 prepilin peptidase K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D HCR03_09225 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D HCR03_09230 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D HCR03_09155 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein D HCR03_09315 hypothetical protein K02411 fliH; flagellar assembly protein FliH D HCR03_09310 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D HCR03_09260 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN D HCR03_09250 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D HCR03_09245 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D HCR03_09240 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D HCR03_09235 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D HCR03_04725 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D HCR03_08435 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D HCR03_14485 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D HCR03_15040 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D HCR03_16495 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D HCR03_19440 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D HCR03_12590 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HCR03_05515 protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D HCR03_05510 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D HCR03_03615 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D HCR03_05045 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HCR03_02115 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D HCR03_02685 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D HCR03_12130 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:cfem02042] D HCR03_12880 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D HCR03_00710 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:cfem02022] D HCR03_01735 HAMP domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D HCR03_13920 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D HCR03_01730 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D HCR03_05975 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D HCR03_05970 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D HCR03_17600 HAMP domain-containing histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D HCR03_19265 HAMP domain-containing histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D HCR03_17595 vanR; VanR-ABDEGLN family response regulator transcription factor K18349 vanRC; two-component system, OmpR family, response regulator VanR D HCR03_19270 vanR; VanR-ABDEGLN family response regulator transcription factor K18349 vanRC; two-component system, OmpR family, response regulator VanR D HCR03_06575 HAMP domain-containing protein K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D HCR03_10170 HAMP domain-containing histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D HCR03_06580 response regulator transcription factor K18941 arlR; two-component system, OmpR family, response regulator ArlR D HCR03_10175 response regulator transcription factor K18941 arlR; two-component system, OmpR family, response regulator ArlR D HCR03_05855 HAMP domain-containing histidine kinase K18986 ihk; two-component system, OmpR family, sensor kinase Ihk [EC:2.7.13.3] D HCR03_13765 HAMP domain-containing histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D HCR03_13770 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR D HCR03_01100 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D HCR03_16990 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D HCR03_09145 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D HCR03_09255 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D HCR03_09135 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D HCR03_16880 ATP-binding protein K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3] D HCR03_16875 DNA-binding domain-containing protein K07719 glnL; two-component system, response regulator GlnL D HCR03_01470 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D HCR03_05720 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D HCR03_09780 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D HCR03_13635 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D HCR03_13745 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D HCR03_19015 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D HCR03_01475 response regulator K07720 yesN; two-component system, response regulator YesN D HCR03_09775 response regulator K07720 yesN; two-component system, response regulator YesN D HCR03_13640 response regulator K07720 yesN; two-component system, response regulator YesN D HCR03_15285 response regulator K07720 yesN; two-component system, response regulator YesN D HCR03_16205 response regulator K07720 yesN; two-component system, response regulator YesN D HCR03_18275 response regulator K07720 yesN; two-component system, response regulator YesN D HCR03_19020 response regulator K07720 yesN; two-component system, response regulator YesN D HCR03_13740 helix-turn-helix domain-containing protein K07720 yesN; two-component system, response regulator YesN C 02035 Bacterial motility proteins [BR:cfem02035] D HCR03_09145 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D HCR03_09160 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D HCR03_09170 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D HCR03_04285 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC D HCR03_09200 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC D HCR03_09195 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D HCR03_09140 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D HCR03_09135 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D HCR03_09255 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D HCR03_01455 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_07775 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_09130 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_09175 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_09400 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_09405 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_10530 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_11090 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_16755 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_16870 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_16975 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D HCR03_09315 hypothetical protein K02411 fliH; flagellar assembly protein FliH D HCR03_09310 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D HCR03_09305 flagellar FliJ family protein K02413 fliJ; flagellar protein FliJ D HCR03_09250 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D HCR03_09245 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D HCR03_09240 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D HCR03_09235 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D HCR03_09225 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D HCR03_09230 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D HCR03_09320 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D HCR03_09265 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D HCR03_09260 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN D HCR03_09330 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D HCR03_09340 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D HCR03_09335 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D HCR03_09295 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD D HCR03_09215 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF D HCR03_09210 flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG D HCR03_09285 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE D HCR03_09355 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D HCR03_09360 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D HCR03_09380 flagellin K02406 fliC; flagellin D HCR03_09180 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D HCR03_09185 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D HCR03_09220 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D HCR03_09275 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D HCR03_09270 OmpA family protein K02557 motB; chemotaxis protein MotB D HCR03_09370 flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW D HCR03_09345 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D HCR03_09280 flagellar FlbD family protein K02385 flbD; flagellar protein FlbD D HCR03_08525 secretion protein F K07333 flaJ; archaeal flagellar protein FlaJ D HCR03_14315 secretion protein F K07333 flaJ; archaeal flagellar protein FlaJ D HCR03_08490 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D HCR03_14855 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D HCR03_04575 pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D HCR03_14860 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D HCR03_04585 type II/IV secretion system ATPase subunit K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HCR03_08510 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HCR03_14305 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D HCR03_14870 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:cfem04812] D HCR03_11475 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D HCR03_14445 ParM/StbA family protein K18640 parM; plasmid segregation protein ParM D HCR03_04940 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HCR03_13230 P-loop NTPase K03609 minD; septum site-determining protein MinD D HCR03_04490 ParA family protein K03496 parA; chromosome partitioning protein D HCR03_06235 ParA family protein K03496 parA; chromosome partitioning protein D HCR03_08280 ParA family protein K03496 parA; chromosome partitioning protein D HCR03_12160 ParA family protein K03496 parA; chromosome partitioning protein D HCR03_13175 ParA family protein K03496 parA; chromosome partitioning protein D HCR03_16540 ParA family protein K03496 parA; chromosome partitioning protein D HCR03_19480 ParA family protein K03496 parA; chromosome partitioning protein D HCR03_04495 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCR03_06225 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCR03_08285 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCR03_12155 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCR03_12165 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCR03_16535 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HCR03_19475 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:cfem04147] D HCR03_04920 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D HCR03_07545 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D HCR03_09395 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HCR03_06705 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HCR03_06760 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D HCR03_03045 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HCR03_11770 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D HCR03_01035 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HCR03_12755 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HCR03_03510 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HCR03_15850 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HCR03_02980 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D HCR03_03885 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D HCR03_08805 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D HCR03_13170 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D HCR03_03715 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HCR03_18520 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HCR03_10345 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D HCR03_03880 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D HCR03_11040 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D HCR03_06700 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D HCR03_03145 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D HCR03_02390 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCR03_15470 glutamine synthetase III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCR03_15540 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HCR03_10060 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HCR03_10290 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HCR03_16865 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HCR03_00635 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HCR03_00870 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HCR03_06880 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D HCR03_03690 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit D HCR03_06765 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HCR03_17075 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HCR03_07500 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:cfem02048] D HCR03_13455 cas1c; type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D HCR03_13460 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D HCR03_13430 cas3; CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D HCR03_13450 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D HCR03_13440 cas8c; type I-C CRISPR-associated protein Cas8c/Csd1 K19117 csd1; CRISPR-associated protein Csd1 D HCR03_13445 cas7c; type I-C CRISPR-associated protein Cas7/Csd2 K19118 csd2; CRISPR-associated protein Csd2 D HCR03_13435 cas5c; type I-C CRISPR-associated protein Cas5 K19119 cas5d; CRISPR-associated protein Cas5d D HCR03_04055 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D HCR03_04045 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D HCR03_04050 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D HCR03_14230 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D HCR03_14810 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D HCR03_14375 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HCR03_14935 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HCR03_14755 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5] D HCR03_19300 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5] D HCR03_19295 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D HCR03_04070 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D HCR03_00915 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D HCR03_13965 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D HCR03_15145 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D HCR03_16595 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D HCR03_16600 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J D HCR03_00030 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D HCR03_04940 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HCR03_11475 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D HCR03_04365 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HCR03_03670 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HCR03_12830 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:cfem01504] D HCR03_00550 MFS transporter K18214 tetP_A; MFS transporter, DHA3 family, tetracycline resistance protein D HCR03_11505 abc-f; ABC-F type ribosomal protection protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D HCR03_06920 CatB-related O-acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-] D HCR03_09090 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1 D HCR03_01205 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1 D HCR03_09445 DUF4825 domain-containing protein K02172 blaR1; bla regulator protein blaR1 D HCR03_09095 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D HCR03_09450 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D HCR03_01200 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D HCR03_03040 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D HCR03_04370 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D HCR03_17600 HAMP domain-containing histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D HCR03_19265 HAMP domain-containing histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D HCR03_17595 vanR; VanR-ABDEGLN family response regulator transcription factor K18349 vanRC; two-component system, OmpR family, response regulator VanR D HCR03_19270 vanR; VanR-ABDEGLN family response regulator transcription factor K18349 vanRC; two-component system, OmpR family, response regulator VanR D HCR03_19240 vanT; serine racemase VanT catalytic subunit K18348 vanT; serine/alanine racemase [EC:5.1.1.18 5.1.1.1] D HCR03_19250 vanG; D-alanine--D-serine ligase VanG K18856 vanC; D-alanine---D-serine ligase [EC:6.3.2.35] D HCR03_19245 D-alanyl-D-alanine carboxypeptidase family protein K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14] D HCR03_08600 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D HCR03_08605 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export D HCR03_08610 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D HCR03_08615 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cfem00537] D HCR03_11770 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:cfem03100] D HCR03_00705 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HCR03_14180 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HCR03_04840 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HCR03_12345 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HCR03_15705 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HCR03_16915 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HCR03_19210 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HCR03_13420 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HCR03_17460 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HCR03_15185 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HCR03_04470 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HCR03_04805 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HCR03_15740 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HCR03_01405 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HCR03_03195 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HCR03_03180 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D HCR03_17470 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HCR03_16145 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HCR03_12185 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HCR03_04480 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HCR03_04815 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HCR03_15730 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HCR03_18085 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HCR03_03185 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HCR03_19165 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HCR03_17455 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HCR03_17465 tRNA-His K14226 tRNA-His; tRNA His D HCR03_04835 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HCR03_12350 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HCR03_15710 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HCR03_16920 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HCR03_18035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HCR03_03860 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HCR03_04820 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HCR03_15725 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HCR03_17475 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HCR03_04400 tRNA-Ile K14230 tRNA-Met; tRNA Met D HCR03_12180 tRNA-Met K14230 tRNA-Met; tRNA Met D HCR03_16675 tRNA-Met K14230 tRNA-Met; tRNA Met D HCR03_03190 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D HCR03_15690 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HCR03_16150 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HCR03_05440 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HCR03_08130 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HCR03_08125 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HCR03_15165 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HCR03_03580 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HCR03_15615 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HCR03_01400 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HCR03_01605 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D HCR03_15620 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D HCR03_07685 tRNA-Val K14237 tRNA-Val; tRNA Val D HCR03_03200 tRNA-Val K14237 tRNA-Val; tRNA Val D HCR03_12190 tRNA-Val K14237 tRNA-Val; tRNA Val D HCR03_12340 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HCR03_04475 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D HCR03_02600 gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D HCR03_18375 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409] D HCR03_13270 mgrA; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D HCR03_07860 iron-containing alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-] D HCR03_03815 acyl-CoA dehydrogenase family protein K22430 carC; caffeyl-CoA reductase-Etf complex subunit CarC [EC:1.3.1.108] D HCR03_03810 electron transfer flavoprotein subunit beta/FixA family protein K22431 carD; caffeyl-CoA reductase-Etf complex subunit CarD [EC:1.3.1.108] D HCR03_03805 electron transfer flavoprotein subunit alpha K22432 carE; caffeyl-CoA reductase-Etf complex subunit CarE [EC:1.3.1.108] D HCR03_16965 saccharopine dehydrogenase family protein K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55] D HCR03_15400 FprA family A-type flavoprotein K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4] D HCR03_17030 msrB; peptide-methionine (R)-S-oxide reductase MsrB K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D HCR03_18430 manganese catalase family protein K07217 ydbD; manganese catalase [EC:1.11.1.6] D HCR03_13575 iron hydrogenase small subunit K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3] D HCR03_18070 desulfoferrodoxin FeS4 iron-binding domain-containing protein K05919 dfx; superoxide reductase [EC:1.15.1.2] D HCR03_14560 NAD(P)H-dependent oxidoreductase subunit E K22340 hylC; formate dehydrogenase (NAD+, ferredoxin) subunit C [EC:1.17.1.11] D HCR03_03345 sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D HCR03_13610 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D HCR03_13285 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D HCR03_17230 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D HCR03_07885 yjjW; YjjW family glycine radical enzyme activase K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D HCR03_19185 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D HCR03_12720 methyltransferase domain-containing protein K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D HCR03_01015 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D HCR03_12645 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D HCR03_06815 protein-glutamine gamma-glutamyltransferase K00686 tgl; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D HCR03_05740 glycoside hydrolase family 130 protein K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340] D HCR03_12235 glycosyltransferase K19422 epsD; glycosyltransferase EpsD [EC:2.4.-.-] D HCR03_02350 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D HCR03_05660 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D HCR03_18665 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D HCR03_02570 carbohydrate kinase K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218] D HCR03_02575 frlD; fructoselysine 6-kinase K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218] D HCR03_07435 frlD; fructoselysine 6-kinase K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218] D HCR03_07465 frlD; fructoselysine 6-kinase K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218] D HCR03_18370 four-carbon acid sugar kinase family protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220] D HCR03_06540 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D HCR03_17380 pap; polyphosphate:AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33] D HCR03_18635 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D HCR03_04860 anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1] D HCR03_05505 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D HCR03_01805 ATP--guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D HCR03_00145 aryldialkylphosphatase K23149 E3.1.1.104; 5-phospho-D-xylono-1,4-lactonase [EC:3.1.1.104] D HCR03_14085 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D HCR03_11875 thioesterase family protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D HCR03_15250 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D HCR03_15930 SpoIIE family protein phosphatase K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16] D HCR03_00395 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D HCR03_01615 YqeG family HAD IIIA-type phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-] D HCR03_08240 DUF89 family protein K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-] D HCR03_14575 DUF89 family protein K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-] D HCR03_03655 DHH family phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59] D HCR03_00530 sulfatase-like hydrolase/transferase K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-] D HCR03_16080 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D HCR03_03865 DUF4093 domain-containing protein K05985 rnmV; ribonuclease M5 [EC:3.1.26.8] D HCR03_15775 glycoside hydrolase family 88 protein K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172] D HCR03_09680 glycoside hydrolase family 31 protein K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D HCR03_13735 yicI; alpha-xylosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D HCR03_17340 LysM peptidoglycan-binding domain-containing protein K06306 sleL; cortical fragment-lytic enzyme [EC:3.2.1.-] D HCR03_03405 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D HCR03_08255 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D HCR03_14590 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D HCR03_17180 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D HCR03_00155 polysaccharide deacetylase family protein K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-] D HCR03_15650 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D HCR03_10560 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D HCR03_02565 SIS domain-containing protein K10708 frlB; fructoselysine 6-phosphate deglycase [EC:3.5.-.-] D HCR03_16140 spore photoproduct lyase K03716 splB; spore photoproduct lyase [EC:4.1.99.14] D HCR03_16735 oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53] D HCR03_00560 oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53] D HCR03_00905 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D HCR03_03840 2-hydroxyacyl-CoA dehydratase K20026 hadC; (R)-2-hydroxyisocaproyl-CoA dehydratase beta subunit [EC:4.2.1.157] D HCR03_18565 2-hydroxyacyl-CoA dehydratase K20903 hgdA; (R)-2-hydroxyglutaryl-CoA dehydratase subunit alpha [EC:4.2.1.167] D HCR03_03845 2-hydroxyacyl-CoA dehydratase K20903 hgdA; (R)-2-hydroxyglutaryl-CoA dehydratase subunit alpha [EC:4.2.1.167] D HCR03_18570 2-hydroxyacyl-CoA dehydratase K20904 hgdB; (R)-2-hydroxyglutaryl-CoA dehydratase subunit beta [EC:4.2.1.167] D HCR03_02555 TIM barrel protein K10709 frlC; fructoselysine 3-epimerase [EC:5.1.3.41] D HCR03_07460 frlC; fructoselysine 3-epimerase K10709 frlC; fructoselysine 3-epimerase [EC:5.1.3.41] D HCR03_03850 2-hydroxyglutaryl-CoA dehydratase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9] D HCR03_18560 2-hydroxyglutaryl-CoA dehydratase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9] D HCR03_16265 benzoyl-CoA reductase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9] D HCR03_03755 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D HCR03_12445 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D HCR03_18675 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D HCR03_18670 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D HCR03_18695 RnfABCDGE type electron transport complex subunit B K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D HCR03_09120 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D HCR03_14685 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D HCR03_15420 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D HCR03_13585 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D HCR03_16355 HAD-IC family P-type ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] D HCR03_19200 HAD-IC family P-type ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] C 99981 Carbohydrate metabolism D HCR03_07480 SIS domain-containing protein K19510 gfrF; fructoselysine-6-phosphate deglycase C 99982 Energy metabolism D HCR03_03055 ferredoxin K05337 fer; ferredoxin D HCR03_16320 ferredoxin K05337 fer; ferredoxin D HCR03_17360 ferredoxin K05337 fer; ferredoxin D HCR03_18680 FMN-binding protein K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D HCR03_12450 hypothetical protein K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D HCR03_18685 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D HCR03_12455 hypothetical protein K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D HCR03_18690 RnfABCDGE type electron transport complex subunit A K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D HCR03_15590 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins D HCR03_07060 nifE; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE D HCR03_16275 4Fe-4S binding protein K02574 napH; ferredoxin-type protein NapH D HCR03_03695 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit D HCR03_14880 secretion protein F K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D HCR03_10205 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D HCR03_13010 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D HCR03_00800 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D HCR03_11815 flippase-like domain-containing protein K07027 K07027; glycosyltransferase 2 family protein D HCR03_15370 flippase-like domain-containing protein K07027 K07027; glycosyltransferase 2 family protein D HCR03_00235 cell wall hydrolase K01449 cwlJ; cell wall hydrolase C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D HCR03_04150 barstar family protein K03623 yhcO; ribonuclease inhibitor D HCR03_06425 cold-shock protein K03704 cspA; cold shock protein D HCR03_06465 cold-shock protein K03704 cspA; cold shock protein D HCR03_07040 P-II family nitrogen regulator K02589 nifHD1; nitrogen regulatory protein PII 1 D HCR03_07045 P-II family nitrogen regulator K02590 nifHD2; nitrogen regulatory protein PII 2 D HCR03_11890 RNA-binding transcriptional accessory protein K06959 tex; protein Tex D HCR03_03425 DUF370 domain-containing protein K09777 remA; extracellular matrix regulatory protein A D HCR03_12090 DUF370 domain-containing protein K24648 remB; extracellular matrix regulatory protein B C 99974 Translation D HCR03_00995 S1 RNA-binding domain-containing protein K07571 K07571; S1 RNA binding domain protein D HCR03_19090 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D HCR03_01800 UvrB/UvrC motif-containing protein K19411 mcsA; protein arginine kinase activator D HCR03_03235 trigger factor K03545 tig; trigger factor D HCR03_09910 hypothetical protein K03188 ureF; urease accessory protein D HCR03_09895 urease accessory protein UreD K03190 ureD; urease accessory protein D HCR03_06370 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D HCR03_13665 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D HCR03_11765 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D HCR03_02295 RadC family protein K03630 radC; DNA repair protein RadC D HCR03_03250 YraN family protein K07460 yraN; putative endonuclease D HCR03_17915 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D HCR03_02080 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein D HCR03_03560 replication-associated recombination protein A K07478 ycaJ; putative ATPase D HCR03_04065 DNA primase K06919 K06919; putative DNA primase/helicase D HCR03_01145 IS5 family transposase K07481 K07481; transposase, IS5 family D HCR03_01250 IS5 family transposase K07481 K07481; transposase, IS5 family D HCR03_08680 IS5 family transposase K07481 K07481; transposase, IS5 family D HCR03_09675 IS5 family transposase K07481 K07481; transposase, IS5 family D HCR03_13355 IS5 family transposase K07481 K07481; transposase, IS5 family D HCR03_17105 IS5 family transposase K07481 K07481; transposase, IS5 family D HCR03_17735 IS5 family transposase K07481 K07481; transposase, IS5 family D HCR03_00085 IS5 family transposase K07481 K07481; transposase, IS5 family D HCR03_11305 transposase K07483 K07483; transposase D HCR03_14510 transposase K07483 K07483; transposase D HCR03_01595 tnpB; IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase D HCR03_16620 tnpB; IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase D HCR03_01170 IS110 family transposase K07486 K07486; transposase D HCR03_09765 IS110 family transposase K07486 K07486; transposase D HCR03_08335 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D HCR03_02445 IS3 family transposase K07497 K07497; putative transposase D HCR03_11340 IS3 family transposase K07497 K07497; putative transposase D HCR03_13990 IS3 family transposase K07497 K07497; putative transposase D HCR03_14505 IS3 family transposase K07497 K07497; putative transposase D HCR03_16635 IS3 family transposase K07497 K07497; putative transposase D HCR03_14400 IS3 family transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D HCR03_06380 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D HCR03_01210 APC family permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D HCR03_01505 APC family permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D HCR03_00535 solute:sodium symporter family transporter K03307 TC.SSS; solute:Na+ symporter, SSS family D HCR03_15830 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D HCR03_11805 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D HCR03_18915 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D HCR03_10220 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family C 99978 Cell growth D HCR03_03600 pro-sigmaK processing inhibitor BofA family protein K06317 bofA; inhibitor of the pro-sigma K processing machinery D HCR03_15360 spore coat protein CotJB K06333 cotJB; spore coat protein JB D HCR03_12135 protein jag K06346 jag; spoIIIJ-associated protein D HCR03_17285 spore maturation protein A K06373 spmA; spore maturation protein A D HCR03_17280 spore maturation protein K06374 spmB; spore maturation protein B D HCR03_04865 STAS domain-containing protein K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D HCR03_12705 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P D HCR03_02045 spoIIR; stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R D HCR03_02865 stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA D HCR03_02860 stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB D HCR03_02855 spoIIIAC; stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC D HCR03_02850 stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD D HCR03_02845 stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE D HCR03_02835 stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG D HCR03_02830 SpoIIIAH-like family protein K06397 spoIIIAH; stage III sporulation protein AH D HCR03_03350 spoIVA; stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A D HCR03_06455 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase D HCR03_14740 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase D HCR03_16235 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase D HCR03_16240 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase D HCR03_16665 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase D HCR03_19215 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase D HCR03_12980 spoVAC; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC D HCR03_12985 spoVAD; stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD D HCR03_12685 spoVAE; stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE D HCR03_02315 dpsA; dipicolinate synthase subunit DpsA K06410 spoVFA; dipicolinate synthase subunit A D HCR03_02320 dipicolinate synthase subunit B K06411 spoVFB; dipicolinate synthase subunit B D HCR03_04555 septation protein SpoVG family protein K06412 spoVG; stage V sporulation protein G D HCR03_08450 septation protein SpoVG family protein K06412 spoVG; stage V sporulation protein G D HCR03_14280 septation protein SpoVG family protein K06412 spoVG; stage V sporulation protein G D HCR03_14845 septation protein SpoVG family protein K06412 spoVG; stage V sporulation protein G D HCR03_06535 stage V sporulation protein S K06416 spoVS; stage V sporulation protein S D HCR03_17670 glycosyltransferase family protein K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF D HCR03_06435 alpha/beta-type small acid-soluble spore protein K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP) D HCR03_07635 tlp; small acid-soluble spore protein Tlp K06434 tlp; small acid-soluble spore protein (thioredoxin-like protein) D HCR03_05105 sporulation protein YqfD K06438 yqfD; similar to stage IV sporulation protein D HCR03_12620 spore germination protein K06295 gerKA; spore germination protein KA D HCR03_12615 Ger(x)C family spore germination protein K06297 gerKC; spore germination protein KC D HCR03_11000 germination protein YpeB K06313 ypeB; spore germination protein C 99993 Cell motility D HCR03_04880 TfoX/Sxy family protein K07343 tfoX; DNA transformation protein and related proteins C 99995 Signaling proteins D HCR03_10575 carbon starvation protein A K06200 cstA; carbon starvation protein D HCR03_19170 typA; translational GTPase TypA K06207 typA; GTP-binding protein D HCR03_02015 ACT domain-containing protein K07166 K07166; ACT domain-containing protein D HCR03_05095 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D HCR03_06090 hypothetical protein K07273 acm; lysozyme D HCR03_13525 hypothetical protein K07273 acm; lysozyme D HCR03_10165 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein C 99994 Others D HCR03_01725 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D HCR03_05525 hemerythrin family protein K07216 hr; hemerythrin D HCR03_00655 helix-turn-helix transcriptional regulator K07219 K07219; putative molybdopterin biosynthesis protein D HCR03_06400 DUF1648 domain-containing protein K26996 sdpI; immunity protein, SdpI family B B 09194 Poorly characterized C 99996 General function prediction only D HCR03_17440 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D HCR03_16695 GNAT family N-acetyltransferase K02348 elaA; ElaA protein D HCR03_05500 phosphatase K04477 ycdX; putative hydrolase D HCR03_07120 phosphatase K04477 ycdX; putative hydrolase D HCR03_10185 patatin-like phospholipase family protein K07001 K07001; NTE family protein D HCR03_08785 HAD family phosphatase K07025 K07025; putative hydrolase of the HAD superfamily D HCR03_15575 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D HCR03_15580 SufD family Fe-S cluster assembly protein K09015 sufD; Fe-S cluster assembly protein SufD D HCR03_18740 phosphotriesterase-related protein K07048 PTER; phosphotriesterase-related protein D HCR03_01930 LemA family protein K03744 lemA; LemA protein D HCR03_11925 phage holin family protein K08972 K08972; putative membrane protein D HCR03_15670 SHOCT domain-containing protein K08982 K08982; putative membrane protein D HCR03_17895 TIGR03943 family protein K08986 ycgQ; putative membrane protein D HCR03_12080 hypothetical protein K06193 phnA; protein PhnA C 99997 Function unknown D HCR03_02485 ccpM; Cys-rich peptide radical SAM maturase CcpM K06871 K06871; uncharacterized protein D HCR03_02670 scfB; thioether cross-link-forming SCIFF peptide maturase K06871 K06871; uncharacterized protein D HCR03_14540 scfB; thioether cross-link-forming SCIFF peptide maturase K06871 K06871; uncharacterized protein D HCR03_16850 anaerobic sulfatase maturase K06871 K06871; uncharacterized protein D HCR03_17085 anaerobic sulfatase maturase K06871 K06871; uncharacterized protein D HCR03_10085 thioredoxin domain-containing protein K06888 K06888; uncharacterized protein D HCR03_17780 GPW/gp25 family protein K06903 W; Bacteriophage baseplate protein W D HCR03_17770 hypothetical protein K06905 D; Bacteriophage probable baseplate hub protein D HCR03_17740 phage tail sheath family protein K06907 FI; Bacteriophage tail sheath protein D HCR03_15175 ATP-binding protein K06923 K06923; uncharacterized protein D HCR03_08235 DUF134 domain-containing protein K06933 K06933; uncharacterized protein D HCR03_14570 DUF134 domain-containing protein K06933 K06933; uncharacterized protein D HCR03_14715 DUF134 domain-containing protein K06933 K06933; uncharacterized protein D HCR03_08760 DUF296 domain-containing protein K06934 K06934; uncharacterized protein D HCR03_17295 phosphohydrolase K06950 K06950; uncharacterized protein D HCR03_18785 HD domain-containing protein K06950 K06950; uncharacterized protein D HCR03_05035 KH domain-containing protein K06960 K06960; uncharacterized protein D HCR03_00215 BtpA/SgcQ family protein K06971 K06971; uncharacterized protein D HCR03_03395 zinc metallopeptidase K06973 K06973; uncharacterized protein D HCR03_01385 N-acetyltransferase K06975 K06975; uncharacterized protein D HCR03_05590 GNAT family N-acetyltransferase K06976 K06976; uncharacterized protein D HCR03_10110 MMPL family transporter K07003 K07003; uncharacterized protein D HCR03_15845 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein D HCR03_02580 amidohydrolase K07045 K07045; uncharacterized protein D HCR03_07455 amidohydrolase K07045 K07045; uncharacterized protein D HCR03_17515 nucleotidyltransferase domain-containing protein K07075 K07075; uncharacterized protein D HCR03_07495 nitroreductase family protein K07078 K07078; uncharacterized protein D HCR03_01835 aldo/keto reductase K07079 K07079; uncharacterized protein D HCR03_13620 permease K07089 K07089; uncharacterized protein D HCR03_17900 permease K07089 K07089; uncharacterized protein D HCR03_14355 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D HCR03_18480 TSUP family transporter K07090 K07090; uncharacterized protein D HCR03_12570 metallophosphoesterase K07095 K07095; uncharacterized protein D HCR03_03240 metallophosphoesterase K07099 K07099; uncharacterized protein D HCR03_09455 SDR family oxidoreductase K07124 K07124; uncharacterized protein D HCR03_14465 SEL1-like repeat protein K07126 K07126; uncharacterized protein D HCR03_15020 SEL1-like repeat protein K07126 K07126; uncharacterized protein D HCR03_16115 hypothetical protein K07137 K07137; uncharacterized protein D HCR03_16845 FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein D HCR03_15675 DUF362 domain-containing protein K07138 K07138; uncharacterized protein D HCR03_12125 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D HCR03_07985 DUF438 domain-containing protein K09155 K09155; uncharacterized protein D HCR03_02010 PFL family protein K09157 K09157; uncharacterized protein D HCR03_08150 HD domain-containing protein K09163 K09163; uncharacterized protein D HCR03_18060 demethoxyubiquinone hydroxylase family protein K09700 K09700; uncharacterized protein D HCR03_12405 DUF1284 domain-containing protein K09706 K09706; uncharacterized protein D HCR03_05065 ACT domain-containing protein K09707 K09707; uncharacterized protein D HCR03_09205 DUF342 domain-containing protein K09749 K09749; uncharacterized protein D HCR03_16840 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D HCR03_07085 ribonuclease H-like YkuK family protein K09776 K09776; uncharacterized protein D HCR03_17260 DUF378 domain-containing protein K09779 K09779; uncharacterized protein D HCR03_05050 DNA-binding protein K09787 K09787; uncharacterized protein D HCR03_16765 SIMPL domain-containing protein K09807 K09807; uncharacterized protein D HCR03_13360 DUF1287 domain-containing protein K09974 K09974; uncharacterized protein D HCR03_18420 YIEGIA domain-containing protein K05739 seaA; uncharacterized protein D HCR03_03925 DUF2156 domain-containing protein K01163 K01163; uncharacterized protein D HCR03_02795 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein D HCR03_12490 YlxR family protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 5, 2024