+D GENES KO
#
KEGG Orthology (KO) - Collimonas fungivorans
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cfu00010]
D CFU_1446 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CFU_1453 pgi1; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CFU_2567 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CFU_1061 fbp; Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CFU_2568 fbaB; Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CFU_3786 cbbA; Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CFU_1589 cbbJ; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CFU_3254 gap; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CFU_3788 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CFU_4064 gpmA; Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CFU_3957 gpmB; Phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CFU_1252 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CFU_3787 pykA; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CFU_3464 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CFU_1349 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D CFU_3559 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CFU_3558 aceF; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CFU_1754 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_3556 lpd; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_2422 Alcohol dehydrogenase class III; Glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CFU_3297 Alcohol dehydrogenase, zinc-binding protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D CFU_2195 Putative membrane-anchored aldehyde dehydrogenase protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_2272 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_0325 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_1655 aldA; Aldehyde dehydrogenase; Acetaldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D CFU_3350 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CFU_3071 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CFU_3157 galM; D-xylose-specific 1-epimerase (mutarotase) K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CFU_0745 conserved hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CFU_1723 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CFU_2724 pmm; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CFU_0814 Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CFU_4110 aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D CFU_4426 pckG; Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:cfu00020]
D CFU_1751 gltA; Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CFU_1740 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CFU_3268 icdA; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CFU_0031 citC; Isocitrate dehydrogenase [NAD] K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D CFU_1752 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D CFU_1753 sucB; Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CFU_1754 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_3556 lpd; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_3800 sucD; Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CFU_3801 sucC; Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CFU_1748 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CFU_1749 sdhB; Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CFU_1746 sdhC; Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CFU_1747 sdhD; Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CFU_3353 fumA; Fumarate hydratase class I, aerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CFU_1175 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CFU_1743 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CFU_2146 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CFU_4426 pckG; Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CFU_3559 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CFU_3558 aceF; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:cfu00030]
D CFU_1453 pgi1; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CFU_1445 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CFU_1452 zwf2; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CFU_0238 hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D CFU_0888 ykgB; Putative hemagglutinin-like protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D CFU_1722 gnd2; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CFU_0704 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CFU_1725 tktA; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CFU_3256 tktA2; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CFU_1438 talB; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CFU_2948 talB2; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CFU_1299 rpiA; Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D CFU_2196 deoC; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CFU_2192 rbsK; Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D CFU_4098 rbsK2; Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D CFU_4324 rbsK3; Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D CFU_1723 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CFU_2724 pmm; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CFU_0814 Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CFU_0611 prsA; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CFU_1454 edd; Phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D CFU_1455 eda; 4-Hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CFU_4430 sldL; Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site K19813 gdh; glucose dehydrogenase [EC:1.1.5.9]
D CFU_3055 2-ketoaldonate reductase, broad specificity K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D CFU_4422 gntK; Gluconokinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D CFU_1272 pfkB; 2-dehydro-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D CFU_3465 ttuD; D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D CFU_2568 fbaB; Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CFU_3786 cbbA; Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CFU_1061 fbp; Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CFU_2567 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:cfu00040]
D CFU_0329 pglA; Polygalacturonase precursor (PGA) (Pectinase) K01184 E3.2.1.15; polygalacturonase [EC:3.2.1.15]
D CFU_3744 udg; UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CFU_1296 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CFU_1997 galU2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CFU_0704 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CFU_1763 xylB2; Xylulose kinase K24707 E2.7.1.16; ribulokinase [EC:2.7.1.16]
D CFU_2949 xylB3; Xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D CFU_1096 xylB; Xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D CFU_3155 xylA; Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D CFU_1097 dalD; D-arabinitol 4-dehydrogenase K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D CFU_1309 putative L-arabinose 1-dehydrogenase K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175]
D CFU_1308 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D CFU_0233 D-Glucuronolactone:NAD+ oxidoreductase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00051 Fructose and mannose metabolism [PATH:cfu00051]
D CFU_1449 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CFU_2725 xanB; GDP-mannose pyrophosphorylase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CFU_1118 wbpW; Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CFU_2724 pmm; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CFU_0814 Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CFU_2726 gcd1; putative mannose-1-phosphate guanyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CFU_1117 gmd; GDP-mannose 4,6 dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CFU_2101 sdr3; dehydrogenase clustered with L-fuconate utilization genes K18333 E1.1.1.435; L-fucose dehydrogenase [EC:1.1.1.435]
D CFU_1199 L-fuconolactone hydrolase K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120]
D CFU_2100 L-fuconate dehydratase K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D CFU_2098 ucpA; 2-keto-3-deoxy-L-fuconate dehydrogenase K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434]
D CFU_2099 2,4-diketo-3-deoxy-L-fuconate hydrolase K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]
D CFU_2567 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CFU_1061 fbp; Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CFU_3155 xylA; Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D CFU_1097 dalD; D-arabinitol 4-dehydrogenase K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D CFU_2568 fbaB; Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CFU_3786 cbbA; Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CFU_1589 cbbJ; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CFU_1116 rmd; oxidoreductase Rmd K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D CFU_4156 manX; putative Phosphotransferase, mannose/fructose-specific component IIA family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:cfu00052]
D CFU_3157 galM; D-xylose-specific 1-epimerase (mutarotase) K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CFU_0745 conserved hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CFU_0831 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CFU_1885 galE2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CFU_1296 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CFU_1997 galU2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CFU_1723 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CFU_2724 pmm; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CFU_0814 Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CFU_1446 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CFU_0020 bga; Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D CFU_0296 bga6; Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D CFU_2567 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CFU_3990 dgoA; Galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D CFU_3988 dgoK; 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D CFU_3989 eda2; 2-dehydro-3-deoxyphosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
D CFU_0743 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:cfu00053]
D CFU_3744 udg; UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CFU_2195 Putative membrane-anchored aldehyde dehydrogenase protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_2272 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_0325 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_0746 ygcX; Glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D CFU_1312 Gluconolactonase K13874 araB; L-arabinonolactonase [EC:3.1.1.15]
D CFU_1306 Dihydroxy-acid dehydratase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25]
D CFU_1308 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D CFU_0233 D-Glucuronolactone:NAD+ oxidoreductase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D CFU_0234 kdgD; 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41]
D CFU_0237 yhaG; D-galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
D CFU_0232 UDP-glucose 4-epimerase K18981 udh; uronate dehydrogenase [EC:1.1.1.203]
C 00500 Starch and sucrose metabolism [PATH:cfu00500]
D CFU_0743 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CFU_1296 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CFU_1997 galU2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CFU_2730 egl; putative endoglucanase precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CFU_3715 otsA2; Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D CFU_1479 otsA; Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D CFU_1481 otsB; Trehalose-6-phosphate phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D CFU_0171 treA; Trehalase; periplasmic precursor K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D CFU_1723 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CFU_2724 pmm; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CFU_0814 Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CFU_1446 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CFU_1453 pgi1; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CFU_1449 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cfu00520]
D CFU_2977 chiII; chitinase ChiII K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D CFU_2975 chiI; chitinase ChiI K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D CFU_2865 hexII; N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CFU_2980 hexI; N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CFU_2983 nagA1-5'; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D CFU_2610 nagA2; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D CFU_2609 nagK2; N-acetylglucosamine kinase K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D CFU_2985 nagK1; N-acetylglucosamine kinase K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D CFU_1449 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CFU_2981 nagB1; sugar isomeraese K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CFU_2611 nagB2; sugar isomerase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CFU_0370 glmS; Glucosamine--fructose-6-phosphate aminotransferase isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CFU_2495 mrsA; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CFU_0372 glmU; N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CFU_3962 Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D CFU_3760 phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D CFU_3627 putative phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D CFU_3628 putative nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D CFU_0513 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CFU_3234 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CFU_3660 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CFU_1833 alpha-L-arabinofuranosidase K20844 abf1; non-reducing end alpha-L-arabinofuranosidase [EC:3.2.1.55]
D CFU_2463 arnC; Polymyxin resistance protein ArnC, glycosyl transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D CFU_2466 pmrJ; Polymyxin resistance protein PmrJ, putative deacetylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D CFU_1446 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CFU_1723 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CFU_2724 pmm; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CFU_0814 Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CFU_1296 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CFU_1997 galU2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CFU_3744 udg; UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CFU_0831 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CFU_1885 galE2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CFU_4156 manX; putative Phosphotransferase, mannose/fructose-specific component IIA family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CFU_1453 pgi1; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CFU_2726 gcd1; putative mannose-1-phosphate guanyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CFU_2725 xanB; GDP-mannose pyrophosphorylase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CFU_1118 wbpW; Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CFU_1117 gmd; GDP-mannose 4,6 dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CFU_1116 rmd; oxidoreductase Rmd K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D CFU_3306 yfbE; putative aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D CFU_3552 ascD; putative Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
C 00620 Pyruvate metabolism [PATH:cfu00620]
D CFU_3350 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CFU_3071 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CFU_3559 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CFU_3558 aceF; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CFU_1754 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_3556 lpd; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_3297 Alcohol dehydrogenase, zinc-binding protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D CFU_2422 Alcohol dehydrogenase class III; Glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CFU_3787 pykA; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CFU_3464 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CFU_2338 accA; Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CFU_0778 bccP; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CFU_0777 accC; Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CFU_1875 accD; Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CFU_2195 Putative membrane-anchored aldehyde dehydrogenase protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_2272 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_0325 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_1655 aldA; Aldehyde dehydrogenase; Acetaldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D CFU_2449 lldD; L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D CFU_0737 dldH; Putative oxidoreductase in glycolate utilization operon K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D CFU_3621 gloA; Lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CFU_1465 Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CFU_4250 ycdW; D-3-phosphoglycerate dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D CFU_0316 D-3-phosphoglycerate dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D CFU_3055 2-ketoaldonate reductase, broad specificity K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D CFU_0846 maeB; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D CFU_3077 maeB2; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D CFU_1743 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CFU_2146 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CFU_3353 fumA; Fumarate hydratase class I, aerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CFU_1175 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CFU_1409 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CFU_4426 pckG; Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CFU_1349 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D CFU_2418 aceB; Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D CFU_4265 fadA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_3460 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_0489 bktB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_1212 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_1522 leuA2; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D CFU_1270 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cfu00630]
D CFU_1553 aceA; Isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D CFU_3350 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CFU_3071 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CFU_2418 aceB; Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D CFU_1743 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CFU_1751 gltA; Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CFU_1740 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CFU_4265 fadA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_3460 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_0489 bktB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_1212 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_1776 phbB; Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D CFU_0739 glcD; Glycolate dehydrogenase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D CFU_0740 glcE; Glycolate dehydrogenase, FAD-binding subunit K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D CFU_0741 glcF; Glycolate dehydrogenase, iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D CFU_1456 katB; Catalase K03781 katE; catalase [EC:1.11.1.6]
D CFU_4250 ycdW; D-3-phosphoglycerate dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D CFU_0316 D-3-phosphoglycerate dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D CFU_3055 2-ketoaldonate reductase, broad specificity K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D CFU_2891 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CFU_0703 gph; Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CFU_2623 putative phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CFU_0046 sgaA; Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D CFU_3400 glyA2; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CFU_3106 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CFU_2022 gcvP; Glycine dehydrogenase decarboxylating (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CFU_2023 gcvT; Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CFU_1754 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_3556 lpd; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_2021 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CFU_3468 gcl; Glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D CFU_3467 hyi; Hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D CFU_3466 ybbQ; tartronic semialdehyde reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D CFU_3465 ttuD; D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D CFU_0314 ttuC; D-malic enzyme K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D CFU_1455 eda; 4-Hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CFU_0887 fdsD; NAD-dependent formate dehydrogenase delta subunit K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D CFU_2006 fdsD2; NAD-dependent formate dehydrogenase delta subunit K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D CFU_2005 fdsA; NAD-dependent formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CFU_0821 fdoG; Formate dehydrogenase O alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CFU_0885 fdhF; NAD-dependent formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CFU_0820 fdoH; Formate dehydrogenase O beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CFU_2004 fdsB2; NAD-dependent formate dehydrogenase beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CFU_0884 fdsB; NAD-dependent formate dehydrogenase beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CFU_0819 fdoI; Formate dehydrogenase O gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D CFU_0883 fdsG; NAD-dependent formate dehydrogenase gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D CFU_2003 fdsG2; NAD-dependent formate dehydrogenase gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D CFU_3321 Kynurenine formamidase, bacterial K07130 kynB; arylformamidase [EC:3.5.1.9]
D CFU_1437 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D CFU_2924 fmdA; Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D CFU_2384 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:cfu00640]
D CFU_3350 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CFU_3071 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CFU_3530 prpE; Propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D CFU_1754 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_3556 lpd; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_0708 paaF; Enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CFU_1211 fadB2; 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CFU_2338 accA; Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CFU_0778 bccP; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CFU_0777 accC; Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CFU_1875 accD; Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CFU_4383 gabT; Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D CFU_3439 Omega-amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D CFU_0091 aptA; Omega-amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D CFU_3801 sucC; Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CFU_3800 sucD; Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CFU_4413 mmsA3; methylmalonate-semialdehyde dehydrogenase, oxidoreductase protein K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CFU_2772 mmsA2; Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CFU_0089 mmsA; Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CFU_3533 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D CFU_3531 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D CFU_3534 prpB; Methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D CFU_1513 yqhD; Alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:cfu00650]
D CFU_4265 fadA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_3460 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_0489 bktB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_1212 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_0534 fadB; 3-hydroxyacyl-CoA dehydrogenase-like protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CFU_1211 fadB2; 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CFU_0708 paaF; Enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CFU_1775 phbC; Polyhydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D CFU_2517 phaZ; poly[D(-)-3-Hydroxybutyrate] depolymerase (PHB depolymerase) K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D CFU_3829 depA; Polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D CFU_1776 phbB; Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D CFU_0314 ttuC; D-malic enzyme K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D CFU_1748 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CFU_1749 sdhB; Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CFU_1746 sdhC; Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CFU_1747 sdhD; Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CFU_4383 gabT; Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D CFU_4378 gabD2; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFU_0313 gabD; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFU_4249 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CFU_1610 scoA; Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D CFU_1611 scoB; Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D CFU_1419 bdhA; D-beta-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D CFU_1420 adc; Acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4]
D CFU_0288 Twin-arginine translocation pathway signal K18372 acmB; methyl acetate hydrolase [EC:3.1.1.114]
D CFU_1261 ilvI; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CFU_1262 ilvN; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:cfu00660]
D CFU_1261 ilvI; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CFU_1262 ilvN; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CFU_3801 sucC; Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CFU_3800 sucD; Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CFU_1866 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CFU_1867 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CFU_1868 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cfu00562]
D CFU_0674 plcN; Phosphoesterase K01114 plc; phospholipase C [EC:3.1.4.3]
D CFU_3159 plcN2; Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CFU_0341 Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CFU_0030 non-hemolytic phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CFU_2489 suhB; Myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CFU_1934 idhA; oxidoreductase-like protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D CFU_1935 oxidoreductase-like protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D CFU_1942 iolE; Inosose dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D CFU_1941 iolD; Epi-inositol hydrolase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D CFU_1943 iolB; 5-keto-2-deoxygluconokinase B K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D CFU_1940 5-keto-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D CFU_4413 mmsA3; methylmalonate-semialdehyde dehydrogenase, oxidoreductase protein K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CFU_2772 mmsA2; Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CFU_0089 mmsA; Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CFU_1589 cbbJ; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cfu00190]
D CFU_1591 nuoA; NADH ubiquinone oxidoreductase chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D CFU_1592 nuoB; NADH-ubiquinone oxidoreductase chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D CFU_1593 nuoC; NADH-ubiquinone oxidoreductase chain C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D CFU_1594 nuoD; NADH-ubiquinone oxidoreductase chain D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D CFU_1595 nuoE; NADH-ubiquinone oxidoreductase chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D CFU_1596 nuoF; NADH-ubiquinone oxidoreductase chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D CFU_1597 nuoG; NADH-ubiquinone oxidoreductase chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D CFU_1598 nuoH; NADH-ubiquinone oxidoreductase chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D CFU_1599 nuoI; NADH-ubiquinone oxidoreductase chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D CFU_1600 nuoJ; NADH-ubiquinone oxidoreductase chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D CFU_1601 nuoK; NADH-ubiquinone oxidoreductase chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D CFU_1602 nuoL; NADH-ubiquinone oxidoreductase chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D CFU_1603 nuoM; NADH-ubiquinone oxidoreductase chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D CFU_1604 nuoN; NADH-ubiquinone oxidoreductase chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D CFU_3421 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D CFU_1748 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CFU_1749 sdhB; Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CFU_1746 sdhC; Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CFU_1747 sdhD; Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CFU_0660 petA; Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CFU_0661 petB; Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CFU_0662 petC; ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D CFU_0564 cyoE; Heme O synthase, protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CFU_2204 cyoD; Cytochrome O ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D CFU_1670 Putative subunit of Alternative cytochrome c oxidase K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D CFU_1668 coxO; Alternative cytochrome c oxidase polypeptide K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D CFU_1669 coxP; Alternative cytochrome c oxidase polypeptide K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D CFU_0559 coxC; Cytochrome c oxidase polypeptide III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D CFU_1667 coxN; Alternative cytochrome c oxidase polypeptide K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D CFU_0555 ctaD; Cytochrome c oxidase polypeptide I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D CFU_1666 coxM; Alternative cytochrome c oxidase polypeptide K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D CFU_1839 soxH; putative cytochrome C oxidase polypeptide II oxidoreductase protein K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D CFU_0554 coxB; Cytochrome c oxidase polypeptide II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D CFU_0557 ctaG; Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D CFU_0563 ctaA; Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D CFU_2205 cyoC; Cytochrome O ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D CFU_2206 cyoB; Cytochrome O ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D CFU_2207 cyoA; Cytochrome O ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D CFU_2762 cydA; Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CFU_2763 cydB; Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CFU_0898 nirM; Cytochrome c551/c552 K08738 CYC; cytochrome c
D CFU_4394 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CFU_4392 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CFU_4393 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CFU_4395 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CFU_4187 atpC2; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CFU_4391 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CFU_4398 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CFU_4396 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CFU_4397 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CFU_2759 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CFU_2515 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CFU_1279 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:cfu00680]
D CFU_3085 fdhA; Glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D CFU_2422 Alcohol dehydrogenase class III; Glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CFU_2421 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D CFU_2005 fdsA; NAD-dependent formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CFU_0821 fdoG; Formate dehydrogenase O alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CFU_0885 fdhF; NAD-dependent formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CFU_0820 fdoH; Formate dehydrogenase O beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CFU_2004 fdsB2; NAD-dependent formate dehydrogenase beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CFU_0884 fdsB; NAD-dependent formate dehydrogenase beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CFU_0819 fdoI; Formate dehydrogenase O gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D CFU_0883 fdsG; NAD-dependent formate dehydrogenase gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D CFU_2003 fdsG2; NAD-dependent formate dehydrogenase gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D CFU_0887 fdsD; NAD-dependent formate dehydrogenase delta subunit K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D CFU_2006 fdsD2; NAD-dependent formate dehydrogenase delta subunit K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D CFU_3400 glyA2; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CFU_3106 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CFU_0046 sgaA; Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D CFU_3465 ttuD; D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D CFU_1252 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CFU_1409 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CFU_1743 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CFU_2568 fbaB; Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CFU_3786 cbbA; Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CFU_1061 fbp; Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CFU_2567 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CFU_2684 NADH:flavin oxidoreductase/NADH oxidase K00317 dmd-tmd; dimethylamine/trimethylamine dehydrogenase [EC:1.5.8.1 1.5.8.2]
D CFU_3350 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CFU_3071 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CFU_1349 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D CFU_4064 gpmA; Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CFU_3957 gpmB; Phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CFU_4427 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CFU_3755 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CFU_1789 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:cfu00910]
D CFU_2924 fmdA; Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D CFU_0166 Nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D CFU_3975 nasF; Nitrate ABC transporter, nitrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D CFU_3974 nasE; Nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D CFU_3973 nasD; Nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D CFU_0170 nasA; Assimilatory nitrate reductase large subunit K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D CFU_0169 putative flavoprotein FAD oxidoreductase K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D CFU_0167 nirB; Nitrite reductase [NAD(P)H] large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D CFU_0168 nirD; Nitrite reductase [NAD(P)H] small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D CFU_0499 fabK; Enoyl-[acyl-carrier-protein] reductase FMN K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CFU_4241 putative dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CFU_1999 gdh2; NAD-specific glutamate dehydrogenase, large form K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D CFU_3983 gdhA; NAD-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D CFU_0502 gltB; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CFU_0503 gltD; glutamate synthase, small subunit, nucleotide-binding, 4Fe-4S protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CFU_0272 cynS; Cyanate hydratase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D CFU_3844 yadF; Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cfu00920]
D CFU_3033 sbp; Sulfate-binding protein sbp K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D CFU_3013 cysT; Sulfate transport system permease protein cysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D CFU_3012 cysW; Sulfate transport system permease protein cysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D CFU_3011 cysA; Sulfate and thiosulfate import ATP-binding protein cysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D CFU_1950 tauA; Taurine-binding periplasmic protein K15551 tauA; taurine transport system substrate-binding protein
D CFU_1952 tauC; Taurine transport system permease protein K15552 tauC; taurine transport system permease protein
D CFU_1951 tauB; Taurine transport ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D CFU_2024 ssuA; aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CFU_3030 ssuA2; Alkanesulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CFU_3031 ssuA3; Alkanesulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CFU_2472 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15553 ssuA; sulfonate transport system substrate-binding protein
D CFU_2810 extracellular solute-binding protein, family 3 K15553 ssuA; sulfonate transport system substrate-binding protein
D CFU_2665 nitrate ABC transporter, periplasmic nitrate-binding protein, putative K15553 ssuA; sulfonate transport system substrate-binding protein
D CFU_3028 ssuC; Alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D CFU_2470 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein
D CFU_2666 Alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D CFU_2808 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D CFU_3027 ssuB2; Sulfonate ABC transporter, ATP-binding subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CFU_2809 ABC transporter related protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CFU_2667 ssuB; ABC-type putative sulfate transporter, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CFU_2471 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CFU_3029 ssuD; Alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D CFU_3032 ssuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D CFU_3511 cysD2; Sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CFU_3510 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CFU_3509 cysH; Phosphoadenylyl-sulfate reductase (thioredoxin) K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D CFU_3507 cysI; Sulfite reductase [NADPH] hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D CFU_1129 Oxidoreductase (flavoprotein) K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D CFU_0729 sseA; putative 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CFU_2026 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CFU_2345 cysE2; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CFU_4153 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CFU_2789 metA; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CFU_0847 alkK; Medium-chain-fatty-acid--CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D CFU_1165 Acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D CFU_0533 acdB; Acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cfu00061]
D CFU_2338 accA; Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CFU_0778 bccP; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CFU_0777 accC; Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CFU_1875 accD; Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CFU_1888 Acyl carrier protein K02078 acpP; acyl carrier protein
D CFU_1889 Acyl carrier protein K02078 acpP; acyl carrier protein
D CFU_2880 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D CFU_1715 mdcH; Malonyl CoA acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CFU_2882 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CFU_1700 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III C terminal K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CFU_2883 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CFU_1900 3-oxoacyl-[acyl-carrier-protein] synthase, FabV inferred for ABFAE pathway K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CFU_1902 3-oxoacyl-[acyl-carrier-protein] synthase, inferred for ABFAE pathway K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CFU_2879 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CFU_1089 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CFU_2216 Short-chain type dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_1903 3-oxoacyl-[acyl-carrier protein] reductase, inferred for ABFAE pathway K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_2881 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_3459 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_0106 Oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_0364 Short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_1342 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CFU_1463 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CFU_2562 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFU_3992 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFU_3993 lcfA; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFU_1209 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cfu00071]
D CFU_4265 fadA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_3460 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_0489 bktB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_1212 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_0535 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CFU_1211 fadB2; 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CFU_0708 paaF; Enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CFU_0534 fadB; 3-hydroxyacyl-CoA dehydrogenase-like protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CFU_3814 Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CFU_1206 fadE2; Acyl-CoA dehydrogenase, short-chain specific K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D CFU_1137 fadE; Acyl-CoA dehydrogenase, short-chain specific K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D CFU_2597 gcdH; Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CFU_2562 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFU_3992 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFU_3993 lcfA; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFU_1209 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFU_0345 mocF; Ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D CFU_0845 rubB; Rubredoxin-NAD(+) reductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1]
D CFU_2422 Alcohol dehydrogenase class III; Glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CFU_3297 Alcohol dehydrogenase, zinc-binding protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D CFU_2195 Putative membrane-anchored aldehyde dehydrogenase protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_2272 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_0325 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis [PATH:cfu00100]
D CFU_1702 putative desaturase K00227 SC5DL; Delta7-sterol 5-desaturase [EC:1.14.19.20]
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cfu00561]
D CFU_3465 ttuD; D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D CFU_2195 Putative membrane-anchored aldehyde dehydrogenase protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_2272 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_0325 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_0751 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CFU_2884 plsX; Phosphate:acyl-ACP acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CFU_3561 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CFU_3619 nlaB; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CFU_0804 plsC; phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CFU_3037 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CFU_3462 lipC; Lipase precursor K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D CFU_1768 putative glycosyltransferase K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
D CFU_4282 ugtP; UDP-N-acetylglucosamine/LPS N-acetylglucosamine transferase-like protein K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00564 Glycerophospholipid metabolism [PATH:cfu00564]
D CFU_4059 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CFU_0750 glpD; Aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CFU_3561 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CFU_3619 nlaB; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CFU_0804 plsC; phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CFU_3037 Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CFU_0674 plcN; Phosphoesterase K01114 plc; phospholipase C [EC:3.1.4.3]
D CFU_3159 plcN2; Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CFU_0341 Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CFU_0030 non-hemolytic phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CFU_1369 pldA; Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D CFU_2094 glpQ; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CFU_2802 putative phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CFU_1157 ugpQ; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CFU_2166 glpQ2; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CFU_1653 eutB; Ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D CFU_1652 eutC; Ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D CFU_1336 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CFU_1482 pssA2; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CFU_1268 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CFU_1267 psd; Phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CFU_3697 pgpA; Phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D CFU_2280 cls2; Cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D CFU_2383 cls3; Cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D CFU_0656 cls; Cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D CFU_2863 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism [PATH:cfu00565]
D CFU_1369 pldA; Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D CFU_0674 plcN; Phosphoesterase K01114 plc; phospholipase C [EC:3.1.4.3]
D CFU_3159 plcN2; Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CFU_0341 Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CFU_0030 non-hemolytic phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism
D CFU_3284 fvt1; Short chain dehydrogenase K04708 KDSR; 3-dehydrosphinganine reductase [EC:1.1.1.102]
C 00590 Arachidonic acid metabolism
D CFU_1369 pldA; Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D CFU_1369 pldA; Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:cfu00592]
D CFU_1369 pldA; Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D CFU_0535 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:cfu01040]
D CFU_1082 jamB2; Delta-9 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D CFU_1083 jamB3; Delta-9 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D CFU_0026 Delta-9 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D CFU_1231 Delta-9 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D CFU_2435 Arylesterase precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D CFU_3986 Acyl-CoA hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cfu00230]
D CFU_1606 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CFU_1723 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CFU_2724 pmm; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CFU_0814 Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CFU_0611 prsA; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CFU_1879 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CFU_1052 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CFU_1228 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CFU_1387 purT; Phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D CFU_2404 purL; Phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D CFU_3843 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CFU_3783 purK; Phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D CFU_3784 purE; Phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CFU_3785 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CFU_0768 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CFU_3953 purH; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CFU_0848 Cytosolic 5'-nucleotidase 1B K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CFU_4086 ushA; 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CFU_1906 surE; 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CFU_3233 Putative cytoplasmic protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D CFU_1773 yfiH; hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CFU_1358 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CFU_1912 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CFU_1823 rdgB; Nucleoside 5-triphosphatase (dHAPTP, dITP, XTP-specific) K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CFU_4144 xdhA; Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D CFU_4145 xdhB; Xanthine dehydrogenase, molybdenum binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D CFU_2114 Xanthine dehydrogenase, molybdenum binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D CFU_2113 Putative xanthine dehydrogenase yagS, FAD binding subunit K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D CFU_2112 Xanthine dehydrogenase iron-sulfur subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D CFU_1359 guaA; GMP synthase glutamine-hydrolyzing K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CFU_4147 guaD; Guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D CFU_2314 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CFU_3878 nrdA; Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CFU_3877 nrdB; Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CFU_0459 dgt; Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1]
D CFU_2316 spoT; Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CFU_1762 ppx; Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CFU_1615 relA; GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D CFU_1925 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CFU_0774 Sugar kinase, ribokinase family K00856 ADK; adenosine kinase [EC:2.7.1.20]
D CFU_0496 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D CFU_1398 add; Adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D CFU_0034 cpdB; 2';3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D CFU_1223 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CFU_3769 cpdA; 3',5'-cyclic-nucleotide phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D CFU_0805 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D CFU_3511 cysD2; Sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CFU_3510 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CFU_3448 transthyretin family protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D CFU_2710 hyuE; Hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D CFU_3449 Chitooligosaccharide deacetylase; putative uricase K16842 hpxB; allantoinase [EC:3.5.2.5]
D CFU_2854 ureC; Urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CFU_2853 ureB; Urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D CFU_2852 ureA; Urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:cfu00240]
D CFU_2502 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CFU_2503 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CFU_0802 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CFU_4415 pyrB2; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CFU_3977 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CFU_0803 pyrX; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CFU_3008 pyrD; Dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D CFU_4126 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CFU_3699 pyrF; Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CFU_1333 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CFU_1912 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CFU_1047 maf; Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CFU_1250 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CFU_3749 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CFU_0848 Cytosolic 5'-nucleotidase 1B K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CFU_4086 ushA; 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CFU_1906 surE; 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CFU_3233 Putative cytoplasmic protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D CFU_1510 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CFU_0801 pyrR; Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CFU_0034 cpdB; 2';3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D CFU_1424 dcd; Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D CFU_3878 nrdA; Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CFU_3877 nrdB; Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CFU_1819 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CFU_3263 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CFU_1435 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CFU_3021 N-carbamoyl-L-amino acid amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D CFU_3457 N-carbamoyl-L-amino-acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D CFU_3402 hypothetical protein K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cfu00250]
D CFU_1386 nadB; quinolinate synthetase, B protein (L-aspartate oxidase) K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CFU_4432 aspG; Asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CFU_0597 ansA; Isoaspartyl aminopeptidase @ Asp-X dipeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D CFU_0143 asdA; L-aspartate-beta-decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D CFU_2458 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CFU_0046 sgaA; Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D CFU_2837 argG2; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CFU_3232 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CFU_2935 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CFU_1925 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CFU_0768 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CFU_0802 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CFU_4415 pyrB2; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CFU_4383 gabT; Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D CFU_4378 gabD2; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFU_0313 gabD; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFU_0502 gltB; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CFU_0503 gltD; glutamate synthase, small subunit, nucleotide-binding, 4Fe-4S protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CFU_1999 gdh2; NAD-specific glutamate dehydrogenase, large form K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D CFU_3983 gdhA; NAD-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D CFU_4418 putA; multifunctional: transcriptional repressor of proline utilization; proline dehydrogenase; pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CFU_2502 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CFU_2503 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CFU_2981 nagB1; sugar isomeraese K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CFU_2611 nagB2; sugar isomerase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CFU_0370 glmS; Glucosamine--fructose-6-phosphate aminotransferase isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CFU_1879 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cfu00260]
D CFU_2336 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CFU_1869 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CFU_2457 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CFU_0724 thrB; Homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D CFU_2312 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CFU_3400 glyA2; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CFU_3106 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CFU_0046 sgaA; Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D CFU_4250 ycdW; D-3-phosphoglycerate dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D CFU_0316 D-3-phosphoglycerate dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D CFU_3055 2-ketoaldonate reductase, broad specificity K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D CFU_3465 ttuD; D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D CFU_4064 gpmA; Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CFU_3957 gpmB; Phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CFU_4427 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CFU_3755 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CFU_1789 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D CFU_3402 hypothetical protein K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D CFU_2551 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D CFU_2022 gcvP; Glycine dehydrogenase decarboxylating (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CFU_2023 gcvT; Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CFU_1754 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_3556 lpd; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_2021 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CFU_1482 pssA2; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CFU_1268 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CFU_1150 betA; Choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D CFU_1108 betaine aldehyde dehydrogenase, putative K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D CFU_1149 betB; Betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D CFU_3099 iron-sulfur cluster-binding protein, rieske family K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251]
D CFU_3098 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251]
D CFU_3103 stcD; NADH:flavin oxidoreductase/NADH oxidase K21833 dgcA; N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3]
D CFU_3102 Iron-sulfur cluster-binding protein K21834 dgcB; N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
D CFU_3101 eftA; Electron transfer flavoprotein, alpha subunit K25960 etfA; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit alpha
D CFU_3100 eftB; Electron transfer flavoprotein, beta subunit K25961 etfB; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit beta
D CFU_3080 soxA; Sarcosine oxidase alpha subunit K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D CFU_3082 soxB; Sarcosine oxidase beta subunit K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D CFU_3079 soxG; Sarcosine oxidase gamma subunit K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D CFU_3081 soxD; Sarcosine oxidase delta subunit K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D CFU_1537 cysM; Cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D CFU_1538 metB; Cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D CFU_3083 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CFU_0624 ilvA; Threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CFU_0328 Pyridoxal-phosphate-dependent enzyme, beta subunit K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CFU_4268 sdsL; putative L-serine dehydratase protein K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19]
D CFU_1273 dsd; D-serine deaminase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D CFU_3166 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CFU_1874 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CFU_1873 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CFU_2187 Pyridoxal phosphate-dependent aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
C 00270 Cysteine and methionine metabolism [PATH:cfu00270]
D CFU_2026 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CFU_2345 cysE2; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CFU_1538 metB; Cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D CFU_1780 metC2; Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CFU_1688 metC; Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CFU_1537 cysM; Cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D CFU_4139 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CFU_1543 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CFU_4030 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CFU_1956 pmlI; Autoinducer synthesis protein K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184]
D CFU_4215 Menaquinone via futalosine step 2 K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CFU_1773 yfiH; hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CFU_3136 tyrB; Aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CFU_2271 GAF domain protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D CFU_3378 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CFU_4028 acyH; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CFU_0114 acdS; 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D CFU_2070 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D CFU_2336 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CFU_1869 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CFU_2457 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CFU_4153 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CFU_2789 metA; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CFU_1880 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CFU_2910 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CFU_3789 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CFU_4158 gshA2; Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D CFU_0910 gshA; Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D CFU_4157 gshB; Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D CFU_0729 sseA; putative 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CFU_0143 asdA; L-aspartate-beta-decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D CFU_3166 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CFU_1743 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CFU_3083 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CFU_4268 sdsL; putative L-serine dehydratase protein K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19]
D CFU_3741 cysK; Cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D CFU_4427 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CFU_3755 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:cfu00280]
D CFU_3789 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CFU_0193 bcd; Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D CFU_1754 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_3556 lpd; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_3814 Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CFU_4269 ivd; Isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D CFU_0708 paaF; Enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CFU_1211 fadB2; 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CFU_0535 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CFU_0270 3-hydroxyisobutyrate dehydrogenase family protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D CFU_4413 mmsA3; methylmalonate-semialdehyde dehydrogenase, oxidoreductase protein K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CFU_2772 mmsA2; Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CFU_0089 mmsA; Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CFU_2195 Putative membrane-anchored aldehyde dehydrogenase protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_2272 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_0325 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_0894 matB; Long-chain-fatty-acid--CoA ligase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D CFU_3439 Omega-amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D CFU_0091 aptA; Omega-amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D CFU_4251 mccC1; Methylcrotonyl-CoA carboxylase biotin-containing subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D CFU_4261 mccB; Methylcrotonyl-CoA carboxylase carboxyl transferase subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D CFU_4257 Methylglutaconyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D CFU_4249 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CFU_1610 scoA; Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D CFU_1611 scoB; Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D CFU_4265 fadA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_3460 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_0489 bktB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_1212 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cfu00290]
D CFU_0624 ilvA; Threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CFU_0328 Pyridoxal-phosphate-dependent enzyme, beta subunit K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CFU_4268 sdsL; putative L-serine dehydratase protein K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19]
D CFU_1866 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CFU_1867 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CFU_1868 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CFU_1261 ilvI; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CFU_1262 ilvN; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CFU_1263 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CFU_1687 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CFU_3789 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CFU_0193 bcd; Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D CFU_2458 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CFU_1522 leuA2; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D CFU_1270 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cfu00300]
D CFU_2457 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CFU_2336 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CFU_1869 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CFU_1678 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CFU_2844 dapA2; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CFU_3856 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CFU_1289 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CFU_3554 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CFU_1290 dapC; N-succinyl-L,L-diaminopimelate aminotransferase alternative K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D CFU_1286 dapE; N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CFU_4228 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CFU_4033 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CFU_0444 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CFU_2538 avtA; putative valine-pyruvate aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D CFU_3307 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CFU_3947 murE2; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CFU_3946 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cfu00310]
D CFU_3809 Aldehyde dehydrogenase B K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D CFU_1753 sucB; Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CFU_1754 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_3556 lpd; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_2597 gcdH; Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CFU_0708 paaF; Enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CFU_1211 fadB2; 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CFU_4265 fadA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_3460 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_0489 bktB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_1212 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_3166 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CFU_4378 gabD2; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFU_0313 gabD; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFU_4197 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D CFU_3543 Ornithine cyclodeaminase K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
D CFU_2195 Putative membrane-anchored aldehyde dehydrogenase protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_2272 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_0325 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:cfu00220]
D CFU_3231 argF; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CFU_2837 argG2; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CFU_3232 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CFU_2935 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CFU_4138 putative N-Dimethylarginine dimethylaminohydrolase K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D CFU_2854 ureC; Urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CFU_2853 ureB; Urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D CFU_2852 ureA; Urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D CFU_2502 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CFU_2503 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CFU_1999 gdh2; NAD-specific glutamate dehydrogenase, large form K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D CFU_3983 gdhA; NAD-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D CFU_2458 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CFU_2971 argA; N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D CFU_3930 argJ; Glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D CFU_4202 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CFU_3966 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CFU_3554 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CFU_3996 argE; Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:cfu00330]
D CFU_0036 Creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D CFU_1427 adi; Arginine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D CFU_1784 speB; agmatinase, putative K01480 speB; agmatinase [EC:3.5.3.11]
D CFU_2195 Putative membrane-anchored aldehyde dehydrogenase protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_2272 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_0325 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_1138 speG; Spermidine N1-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D CFU_4374 speB2; Agmatinase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7]
D CFU_2925 amiE; Aliphatic amidase amiE K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CFU_4138 putative N-Dimethylarginine dimethylaminohydrolase K27545 argZ; arginine dihydrolase [EC:3.5.3.27]
D CFU_4137 rocD; Ornithine aminotransferase (Ornithine--oxo-acid aminotransferase) K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D CFU_0757 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CFU_4418 putA; multifunctional: transcriptional repressor of proline utilization; proline dehydrogenase; pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CFU_3896 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CFU_3861 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CFU_0135 pip; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CFU_2670 Peptidyl prolyl 4-hydroxylase-like protein, alpha subunit K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2]
D CFU_4197 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D CFU_3544 prdF; proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
D CFU_3543 Ornithine cyclodeaminase K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
C 00340 Histidine metabolism [PATH:cfu00340]
D CFU_0514 hisG; ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CFU_1924 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D CFU_0522 hisE; Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D CFU_0521 hisI; Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D CFU_0519 hisA; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CFU_0518 hisH; Imidazole glycerol phosphate synthase amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CFU_0520 hisF; Imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CFU_0517 hisB; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D CFU_4237 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CFU_3753 Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CFU_0515 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D CFU_3453 hutH3; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D CFU_1894 Putative histidine ammonia-lyase protein K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D CFU_3022 hutH2; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D CFU_2388 hutH; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D CFU_2390 hutU; Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D CFU_2386 hutI; Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D CFU_2385 hutF; Formiminoglutamic iminohydrolase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D CFU_2384 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D CFU_2195 Putative membrane-anchored aldehyde dehydrogenase protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_2272 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_0325 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_1518 ABC transporter ATP-binding protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:cfu00350]
D CFU_4237 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CFU_3753 Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CFU_3136 tyrB; Aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CFU_1560 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CFU_2083 bllY; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CFU_3219 hmgA; Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D CFU_3430 maiA; Maleylacetoacetate isomerase / Glutathione S-transferase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D CFU_3218 fahA; Fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D CFU_2422 Alcohol dehydrogenase class III; Glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CFU_3297 Alcohol dehydrogenase, zinc-binding protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D CFU_4378 gabD2; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFU_0313 gabD; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFU_3431 fst; Fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:cfu00360]
D CFU_4019 pah; Phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D CFU_0708 paaF; Enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CFU_4237 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CFU_3753 Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CFU_3136 tyrB; Aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CFU_1560 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CFU_2083 bllY; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CFU_0904 dad2; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D CFU_4226 dad4; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D CFU_2698 putative D-amino-acid dehydrogenase, FAD dependent K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D CFU_2410 dad3; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D CFU_0547 dad; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D CFU_4197 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D CFU_2793 katG; Catalase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D CFU_2925 amiE; Aliphatic amidase amiE K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CFU_0344 mocE; naphthalene dioxygenase ferredoxin K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D CFU_0345 mocF; Ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D CFU_0048 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D CFU_0712 mhpD; putative 4-oxalocrotonate decarboxylase or 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00380 Tryptophan metabolism [PATH:cfu00380]
D CFU_3323 Tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D CFU_3321 Kynurenine formamidase, bacterial K07130 kynB; arylformamidase [EC:3.5.1.9]
D CFU_3322 kynU; Kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D CFU_1753 sucB; Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CFU_1754 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_3556 lpd; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_2597 gcdH; Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CFU_0708 paaF; Enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CFU_1211 fadB2; 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CFU_4265 fadA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_3460 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_0489 bktB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_1212 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_2195 Putative membrane-anchored aldehyde dehydrogenase protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_2272 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_0325 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_2925 amiE; Aliphatic amidase amiE K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CFU_1456 katB; Catalase K03781 katE; catalase [EC:1.11.1.6]
D CFU_2793 katG; Catalase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cfu00400]
D CFU_3237 aroG; 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CFU_0458 aroB; bifunctional 3-dehydroquinate synthase/shikimate kinase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4]
D CFU_0779 aroQ; 3-dehydroquinate dehydratase II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CFU_0787 aroE; Shikimate 5-dehydrogenase I alpha K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D CFU_3751 aroO; 5-Enolpyruvylshikimate-3-phosphate synthase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CFU_2906 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CFU_0702 trpE; Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CFU_0701 trpG; Anthranilate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CFU_0700 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D CFU_1872 trpF; Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D CFU_0699 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CFU_1874 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CFU_1873 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CFU_3754 pheA; Prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D CFU_3752 tyrA; Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CFU_4385 Cyclohexadienyl dehydratase K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D CFU_4237 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CFU_3753 Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CFU_3136 tyrB; Aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CFU_4019 pah; Phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cfu00410]
D CFU_3634 panD; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CFU_4383 gabT; Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D CFU_2195 Putative membrane-anchored aldehyde dehydrogenase protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_2272 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_0325 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_3484 panC; Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CFU_3021 N-carbamoyl-L-amino acid amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D CFU_3457 N-carbamoyl-L-amino-acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D CFU_3439 Omega-amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D CFU_0091 aptA; Omega-amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D CFU_0708 paaF; Enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CFU_1211 fadB2; 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CFU_4413 mmsA3; methylmalonate-semialdehyde dehydrogenase, oxidoreductase protein K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CFU_2772 mmsA2; Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CFU_0089 mmsA; Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:cfu00430]
D CFU_0348 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CFU_2169 ggt2; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CFU_1727 ggtA; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CFU_3805 ggt3; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CFU_1999 gdh2; NAD-specific glutamate dehydrogenase, large form K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism [PATH:cfu00440]
D CFU_0637 phnA; Phosphonoacetate hydrolase K19670 phnA; phosphonoacetate hydrolase [EC:3.11.1.2]
D CFU_0638 aldehyde dehydrogenase K00206 phnY; phosphonoacetaldehyde dehydrogenase [EC:1.2.1.-]
D CFU_0632 phnW; 2-aminoethylphosphonate:pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
C 00450 Selenocompound metabolism [PATH:cfu00450]
D CFU_1780 metC2; Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CFU_1688 metC; Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CFU_4139 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CFU_1543 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CFU_1538 metB; Cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D CFU_2028 sufS; Cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CFU_2718 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CFU_3062 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CFU_3511 cysD2; Sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CFU_3510 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CFU_1696 selD; Selenide,water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CFU_0817 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CFU_3479 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cfu00460]
D CFU_0348 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CFU_2169 ggt2; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CFU_1727 ggtA; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CFU_3805 ggt3; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CFU_4432 aspG; Asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CFU_0597 ansA; Isoaspartyl aminopeptidase @ Asp-X dipeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D CFU_3400 glyA2; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CFU_3106 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CFU_2924 fmdA; Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00470 D-Amino acid metabolism [PATH:cfu00470]
D CFU_4227 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CFU_2424 dadX; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CFU_4197 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D CFU_3940 ddlB; D-alanine-D-alanine ligase B, affects cell division K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CFU_3166 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CFU_3354 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CFU_3944 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CFU_1273 dsd; D-serine deaminase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D CFU_4033 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CFU_0444 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CFU_3544 prdF; proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
D CFU_1308 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D CFU_0233 D-Glucuronolactone:NAD+ oxidoreductase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D CFU_0904 dad2; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D CFU_4226 dad4; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D CFU_2698 putative D-amino-acid dehydrogenase, FAD dependent K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D CFU_2410 dad3; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D CFU_0547 dad; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:cfu00480]
D CFU_0348 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CFU_2169 ggt2; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CFU_1727 ggtA; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CFU_3805 ggt3; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CFU_1271 Uncharacterized protein involved in cation transport K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D CFU_4182 ybgL; Lactam utilization protein LAMB K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D CFU_4180 ybgJ; Allophanate hydrolase subunit 1 K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D CFU_4181 dUR1; Allophanate hydrolase subunit 2 K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D CFU_1030 hypothetical protein K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D CFU_4158 gshA2; Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D CFU_0910 gshA; Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D CFU_4157 gshB; Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D CFU_3520 pepA; Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CFU_1059 pepN; Membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CFU_1417 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_0769 putative Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_4193 Maleylacetoacetate isomerase/Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_2832 gstA1; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_0495 gstA; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_0141 gst9; Putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_0308 gst2; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_0016 gst; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_0147 gst3; Glutathione transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_2131 gst4; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_4023 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_2353 gst8; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_3830 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_2276 gor; Glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D CFU_3268 icdA; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CFU_1722 gnd2; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CFU_1445 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CFU_1452 zwf2; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CFU_0753 bsaA; Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D CFU_3935 AhpC/TSA-family protein K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
D CFU_3581 TPR repeat protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
D CFU_1361 conserved protein, glycosyl hydrolase family K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis [PATH:cfu00540]
D CFU_1343 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CFU_3934 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D CFU_1341 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CFU_2343 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CFU_1344 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CFU_1220 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CFU_0467 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CFU_1251 kdsA; 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CFU_0466 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CFU_1222 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CFU_0828 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CFU_4031 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CFU_4032 htrB; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CFU_3214 aspH; Fe(2+)/alpha-ketoglutarate-dependent dioxygenase lpxO K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D CFU_4005 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D CFU_4174 lpcA; Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CFU_0041 gmhA; Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CFU_3743 rfaE; ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D CFU_3618 putative Histidinol-phosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D CFU_4010 rfaE2; D-glycero-beta-D-manno-heptose 7-phosphate kinase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D CFU_0815 rfaC; Lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D CFU_0830 rfaL; membrane spanning protein involved in lipopolysaccharide biosynthesis K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cfu00541]
D CFU_1296 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CFU_1997 galU2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CFU_0831 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CFU_1885 galE2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CFU_3744 udg; UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CFU_0807 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CFU_0806 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CFU_0808 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CFU_0809 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CFU_3552 ascD; putative Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D CFU_2725 xanB; GDP-mannose pyrophosphorylase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CFU_1118 wbpW; Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CFU_1117 gmd; GDP-mannose 4,6 dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CFU_1116 rmd; oxidoreductase Rmd K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D CFU_3306 yfbE; putative aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D CFU_0372 glmU; N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CFU_3660 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CFU_0813 wbpM; Nucleoside-diphosphate sugar epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00550 Peptidoglycan biosynthesis [PATH:cfu00550]
D CFU_0513 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CFU_3234 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CFU_3941 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CFU_3944 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CFU_3307 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CFU_3947 murE2; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CFU_3940 ddlB; D-alanine-D-alanine ligase B, affects cell division K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CFU_3946 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CFU_1335 uppS; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CFU_0842 bacA; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CFU_0843 bacA2; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CFU_1195 ybjG; Phosphoesterase, PA-phosphatase-like protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CFU_3945 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CFU_3942 murG; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CFU_0788 mtgA; Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CFU_2815 mrcA2; Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CFU_0452 mrcA; Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CFU_3343 Multimodular transpeptidase-transglycosylase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D CFU_3342 pbpC; Multimodular transpeptidase-transglycosylase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D CFU_4117 mrdA; Putative Penicillin-binding protein 2 (PBP-2) (MrdA) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CFU_3948 ftsI; Cell division protein ftsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CFU_4214 dac; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CFU_3703 dacB; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:cfu00552]
D CFU_0842 bacA; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CFU_0843 bacA2; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CFU_1195 ybjG; Phosphoesterase, PA-phosphatase-like protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CFU_4282 ugtP; UDP-N-acetylglucosamine/LPS N-acetylglucosamine transferase-like protein K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CFU_0813 wbpM; Nucleoside-diphosphate sugar epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cfu00543]
D CFU_2026 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CFU_2345 cysE2; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CFU_2732 gumH; GumH K13657 gumH; alpha-1,3-mannosyltransferase [EC:2.4.1.252]
D CFU_2723 gumF; putative acetyltransferase K13663 gumF; acyltransferase [EC:2.3.1.-]
D CFU_2727 gumM; GumM protein K13660 gumM; beta-1,4-glucosyltransferase [EC:2.4.1.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cfu00730]
D CFU_0715 Thiamin biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CFU_0717 thiD; Phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CFU_0791 thiD2; Phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CFU_3130 iscS2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CFU_2173 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CFU_0734 dxs; 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CFU_0716 thiG; Thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D CFU_0718 thiE; Thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CFU_3696 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CFU_3230 engC; Ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CFU_3890 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CFU_3891 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CFU_1223 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:cfu00740]
D CFU_2258 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CFU_3435 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CFU_3396 ribD; 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CFU_3851 2-haloalkanoic acid dehalogenase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D CFU_4069 ribH2; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CFU_3434 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CFU_3395 ribE; Riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CFU_3259 ribF; FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CFU_0243 phoN; putative acid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D CFU_3032 ssuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D CFU_1606 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CFU_3901 ubiX; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:cfu00750]
D CFU_3778 pdxH; Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D CFU_3681 ydbC; Aldo-keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D CFU_3755 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CFU_3624 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D CFU_2867 pdxJ; Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D CFU_2312 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cfu00760]
D CFU_1386 nadB; quinolinate synthetase, B protein (L-aspartate oxidase) K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CFU_1381 nadA; Quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D CFU_4303 nadC2; Quinolinate phosphoribosyltransferase (decarboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CFU_1382 nadC; Quinolinate phosphoribosyltransferase (decarboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CFU_3057 pncB; Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CFU_0848 Cytosolic 5'-nucleotidase 1B K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CFU_4086 ushA; 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CFU_1906 surE; 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CFU_1050 nadD; Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CFU_2752 nadE; NAD synthetase/Glutamine amidotransferase chain of NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D CFU_3698 cinA; conserved hypothetical protein, putative competence-damaged inducible protein, CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D CFU_3633 NAD(P) transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D CFU_3635 NAD(P) transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D CFU_3632 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D CFU_4378 gabD2; succinic semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CFU_0313 gabD; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:cfu00770]
D CFU_1261 ilvI; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CFU_1262 ilvN; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CFU_1263 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CFU_1687 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CFU_3836 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CFU_2012 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CFU_3291 panE2; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CFU_3484 panC; Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CFU_4204 Pantothenate kinase type III, CoaX-like protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CFU_3262 dfp; Phosphopantothenoylcysteine synthetase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CFU_0585 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CFU_3925 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CFU_2866 acpS; Holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CFU_1904 hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D CFU_3789 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CFU_3021 N-carbamoyl-L-amino acid amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D CFU_3457 N-carbamoyl-L-amino-acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D CFU_3634 panD; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CFU_2195 Putative membrane-anchored aldehyde dehydrogenase protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_2272 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_0325 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:cfu00780]
D CFU_4006 bioC; Biotin synthesis protein bioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D CFU_1900 3-oxoacyl-[acyl-carrier-protein] synthase, FabV inferred for ABFAE pathway K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CFU_1902 3-oxoacyl-[acyl-carrier-protein] synthase, inferred for ABFAE pathway K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CFU_2879 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CFU_1089 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CFU_2216 Short-chain type dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_1903 3-oxoacyl-[acyl-carrier protein] reductase, inferred for ABFAE pathway K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_2881 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_3459 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_0106 Oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_0364 Short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_1342 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CFU_1463 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CFU_4255 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CFU_4254 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CFU_4253 bioD; Dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CFU_4252 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CFU_4205 bpl; Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cfu00785]
D CFU_4192 lipB; Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CFU_4191 lipA; Lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CFU_1754 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_3556 lpd; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_3559 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CFU_3558 aceF; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CFU_1752 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D CFU_1753 sucB; Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CFU_2022 gcvP; Glycine dehydrogenase decarboxylating (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CFU_2023 gcvT; Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CFU_2021 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:cfu00790]
D CFU_3208 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CFU_0735 GTP cyclohydrolase I K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D CFU_3890 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CFU_3891 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CFU_4068 phoD; Alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CFU_3648 Alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CFU_0654 ntpA; Dihydroneopterin triphosphate pyrophosphohydolase type 2 K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D CFU_3078 folB2; Putative dihydroneopterin aldolase protein K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CFU_0378 folB; Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CFU_3838 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CFU_2496 folP; Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CFU_1428 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CFU_1876 folC; Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CFU_2258 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CFU_3435 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CFU_1180 pabB; Aminodeoxychorismate lyase K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D CFU_1374 queD; Queuosine biosynthesis K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CFU_2828 Pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D CFU_4019 pah; Phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D CFU_1373 queE; Queuosine Biosynthesis K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CFU_4016 queC; Queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CFU_0623 queF; NADPH dependent preQ0 reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CFU_2895 moaA; Molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CFU_2309 moaE; Molybdopterin converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CFU_2957 mog; Molybdopterin biosynthesis mog protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CFU_2311 molybdopterin biosynthesis protein, molybdenum incorporation step K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CFU_2897 molybdopterin binding domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CFU_3904 Molybdopterin-guanine dinucleotide biosynthesis protein A K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D CFU_2896 Molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:cfu00670]
D CFU_1428 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CFU_0908 folD; Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CFU_3400 glyA2; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CFU_3106 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CFU_1228 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CFU_3953 purH; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CFU_3305 yfbG; hypothetical protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CFU_4109 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CFU_2464 arnA_FT; Polymyxin resistance protein ArnA_FT, UDP-4-amino-4-deoxy-L-arabinose formylase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CFU_2023 gcvT; Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CFU_4139 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CFU_1435 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CFU_1437 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D CFU_4026 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CFU_4025 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cfu00860]
D CFU_3475 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CFU_3913 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CFU_0790 hemL; Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CFU_0435 hemB; Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CFU_1410 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CFU_1411 hemD; uroporphyrinogen III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D CFU_4372 hemE; Uroporphyrinogen III decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CFU_1051 hemF; Coproporphyrinogen III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D CFU_3862 Hypothetical membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D CFU_3849 hemH; Ferrochelatase, protoheme ferro-lyase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CFU_1412 hemX; hypothetical protein K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D CFU_3512 cysG; Uroporphyrinogen-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D CFU_3972 cobA; Uroporphyrinogen-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D CFU_0564 cyoE; Heme O synthase, protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CFU_0563 ctaA; Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D CFU_3517 cbiX; Sirohydrochlorin cobaltochelatase K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D CFU_0736 Cob(I)alamin adenosyltransferase PduO K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CFU_1172 cbiB; Adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D CFU_1718 Ferritin, Dps family protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
D CFU_3871 bfr; Bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cfu00130]
D CFU_0784 ubiC; Chorismate--pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D CFU_0759 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D CFU_1242 ubiD; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D CFU_3901 ubiX; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D CFU_3906 visC; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D CFU_3759 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D CFU_3631 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D CFU_0641 ubiE; Ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CFU_3970 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D CFU_1367 NAD(P)H oxidoreductase YRKL K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CFU_2916 tryptophan repressor binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CFU_2996 tryptophan repressor binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CFU_1039 wrbA; Multimeric flavodoxin WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CFU_3281 ytfG; putative nucleoside-diphosphate-sugar epimerase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CFU_0289 NmrA-like protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CFU_1560 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CFU_2083 bllY; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cfu00900]
D CFU_0734 dxs; 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CFU_1337 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CFU_1791 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CFU_0612 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CFU_1792 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CFU_1915 ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CFU_1236 lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CFU_4265 fadA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_3460 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_0489 bktB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_1212 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_3901 ubiX; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D CFU_0733 ispA; Geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D CFU_3920 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CFU_1335 uppS; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CFU_3229 peptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:cfu00906]
D CFU_2447 Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D CFU_1087 fatty acid desaturase K02294 crtR; beta-carotene hydroxylase [EC:1.14.13.-]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D CFU_2195 Putative membrane-anchored aldehyde dehydrogenase protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_2272 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_0325 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:cfu00907]
D CFU_0708 paaF; Enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CFU_1211 fadB2; 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CFU_4249 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D CFU_0535 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CFU_1725 tktA; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CFU_3256 tktA2; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cfu00523]
D CFU_0807 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CFU_0806 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CFU_0808 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CFU_0809 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CFU_0811 wbiB; NAD-dependent epimerase/dehydratase K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D CFU_1389 entD; 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
C 01055 Biosynthesis of vancomycin group antibiotics
D CFU_0806 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:cfu00311]
D CFU_1201 Penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D CFU_1378 penA; Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:cfu00332]
D CFU_3896 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CFU_3861 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cfu00261]
D CFU_2303 Hypothetical MbtH-like protein K05375 mbtH; MbtH protein
D CFU_3511 cysD2; Sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CFU_3510 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CFU_2336 ask; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CFU_1869 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CFU_1678 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CFU_2844 dapA2; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CFU_3856 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cfu00521]
D CFU_1446 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CFU_1723 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CFU_2724 pmm; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CFU_0814 Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CFU_2489 suhB; Myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CFU_1934 idhA; oxidoreductase-like protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D CFU_1935 oxidoreductase-like protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D CFU_0807 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CFU_0806 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CFU_0808 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CFU_0809 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CFU_1446 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:cfu00525]
D CFU_0807 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CFU_0806 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:cfu00401]
D CFU_3752 tyrA; Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CFU_4237 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CFU_3753 Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CFU_3136 tyrB; Aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CFU_0702 trpE; Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CFU_0701 trpG; Anthranilate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D CFU_1715 mdcH; Malonyl CoA acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CFU_2882 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CFU_2216 Short-chain type dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_1903 3-oxoacyl-[acyl-carrier protein] reductase, inferred for ABFAE pathway K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_2881 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_3459 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_0106 Oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_0364 Short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_1463 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CFU_1888 Acyl carrier protein K02078 acpP; acyl carrier protein
D CFU_1889 Acyl carrier protein K02078 acpP; acyl carrier protein
D CFU_2880 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:cfu00999]
D CFU_4030 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CFU_0787 aroE; Shikimate 5-dehydrogenase I alpha K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:cfu00362]
D CFU_2076 pcaD; hydrolase or acyltransferase-like protein K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D CFU_2130 pcaD2; Beta-ketoadipate enol-lactone hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D CFU_0158 pcaI; 3-oxoadipate CoA-transferase subunit A K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6]
D CFU_0159 pcaJ; 3-oxoadipate CoA-transferase subunit B K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6]
D CFU_0535 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CFU_0160 pcaF; Beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D CFU_0048 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D CFU_0712 mhpD; putative 4-oxalocrotonate decarboxylase or 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D CFU_3189 putative 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CFU_4133 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CFU_3452 small molecule metabolism; degradation; carbon compounds K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CFU_0092 dmpI; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CFU_2078 pcaG; Protocatechuate 3,4-dioxygenase alpha chain K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D CFU_2079 pcaH; Protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D CFU_2077 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D CFU_1531 gamma-carboxymuconolactone decarboxylase subunit-like protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D CFU_3002 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D CFU_0487 pobA; P-hydroxybenzoate hydroxylase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D CFU_1211 fadB2; 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CFU_0534 fadB; 3-hydroxyacyl-CoA dehydrogenase-like protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CFU_2597 gcdH; Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D CFU_0708 paaF; Enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CFU_4265 fadA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_3460 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_0489 bktB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_1212 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:cfu00627]
D CFU_2925 amiE; Aliphatic amidase amiE K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D CFU_3901 ubiX; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D CFU_0708 paaF; Enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CFU_3539 glnA; Glutamine synthetase type I K20712 glnA; 3-(hydroxyamino)phenol mutase [EC:5.4.4.3]
C 00364 Fluorobenzoate degradation [PATH:cfu00364]
D CFU_0727 putative carboxymethylenebutenolidase (Dienelactone hydrolase) K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D CFU_0260 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:cfu00625]
D CFU_3297 Alcohol dehydrogenase, zinc-binding protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D CFU_2422 Alcohol dehydrogenase class III; Glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CFU_2195 Putative membrane-anchored aldehyde dehydrogenase protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_2272 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_0325 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CFU_3085 fdhA; Glutathione-independent formaldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D CFU_0318 hadL; Haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D CFU_1835 dhlB; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D CFU_3630 HAD-superfamily hydrolase, subfamily IA, variant 3 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D CFU_1630 HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like) K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:cfu00361]
D CFU_0727 putative carboxymethylenebutenolidase (Dienelactone hydrolase) K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D CFU_0260 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D CFU_0318 hadL; Haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D CFU_1835 dhlB; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D CFU_3630 HAD-superfamily hydrolase, subfamily IA, variant 3 K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D CFU_1630 HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like) K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:cfu00623]
D CFU_0727 putative carboxymethylenebutenolidase (Dienelactone hydrolase) K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D CFU_0260 Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:cfu00622]
D CFU_3189 putative 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CFU_4133 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CFU_3452 small molecule metabolism; degradation; carbon compounds K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CFU_0092 dmpI; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CFU_0048 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D CFU_0712 mhpD; putative 4-oxalocrotonate decarboxylase or 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00633 Nitrotoluene degradation [PATH:cfu00633]
D CFU_2595 NADH:flavin oxidoreductase/NADH oxidase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D CFU_0354 NADH:flavin oxidoreductase/NADH oxidase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D CFU_0360 morB; N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D CFU_0535 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:cfu00643]
D CFU_3219 hmgA; Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D CFU_3430 maiA; Maleylacetoacetate isomerase / Glutathione S-transferase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D CFU_3218 fahA; Fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D CFU_2925 amiE; Aliphatic amidase amiE K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
D CFU_2854 ureC; Urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D CFU_2853 ureB; Urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D CFU_2852 ureA; Urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:cfu00930]
D CFU_1980 ThiJ/PfpI K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D CFU_0708 paaF; Enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CFU_1211 fadB2; 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation [PATH:cfu00621]
D CFU_3189 putative 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CFU_4133 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CFU_3452 small molecule metabolism; degradation; carbon compounds K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CFU_0092 dmpI; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CFU_0048 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D CFU_0712 mhpD; putative 4-oxalocrotonate decarboxylase or 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00626 Naphthalene degradation [PATH:cfu00626]
D CFU_3297 Alcohol dehydrogenase, zinc-binding protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D CFU_2422 Alcohol dehydrogenase class III; Glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D CFU_2078 pcaG; Protocatechuate 3,4-dioxygenase alpha chain K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D CFU_2079 pcaH; Protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
D CFU_2819 tesA; TesA protein K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cfu03020]
D CFU_0393 rpoB; DNA-directed RNA polymerase subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CFU_0394 rpoC; DNA-directed RNA polymerase subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CFU_0427 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CFU_2315 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D CFU_2111 DinG family ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cfu03010]
D CFU_3748 rpsA; SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D CFU_1331 rpsB; SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D CFU_0407 rpsC; SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D CFU_0426 rpsD; SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D CFU_0418 rpsE; SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D CFU_2486 rpsF; SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D CFU_0397 rpsG; SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D CFU_0415 rpsH; SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D CFU_3967 rpsI; SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D CFU_0400 rpsJ; SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D CFU_0425 rpsK; SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D CFU_0396 rpsL; SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D CFU_0424 rpsM; SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D CFU_0414 SSU ribosomal protein S14p (S29e) K02954 RP-S14; small subunit ribosomal protein S14
D CFU_3064 rpsO; SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D CFU_1167 rpsP; 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CFU_0410 rpsQ; SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D CFU_2484 rpsR; SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D CFU_0405 rpsS; SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D CFU_3272 rpsT; SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D CFU_1028 rpsU; SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D CFU_0390 rplA; LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D CFU_0404 rplB; LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D CFU_0401 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CFU_0402 rplD; LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D CFU_0413 rplE; LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D CFU_0416 rplF; LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D CFU_0392 rplL; LSU ribosomal protein L7/L12 (L23e) K02935 RP-L7; large subunit ribosomal protein L7/L12
D CFU_2483 rplI; LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D CFU_0391 rplJ; LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D CFU_0389 rplK; LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D CFU_3968 rplM; LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D CFU_0411 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D CFU_0420 rplO; LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D CFU_0408 rplP; LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D CFU_0428 rplQ; LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D CFU_0417 rplR; LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D CFU_1170 rplS; LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D CFU_1503 rplT; LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D CFU_3899 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D CFU_0406 rplV; LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D CFU_0403 rplW; LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D CFU_0412 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D CFU_0610 rplY; LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D CFU_3898 rpmA; LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D CFU_1233 rpmB; LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D CFU_0409 rpmC; LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D CFU_0419 rpmD; LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D CFU_0870 rpmE; LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D CFU_2885 LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D CFU_1232 rpmG; LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D CFU_4450 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D CFU_1502 50S ribosomal subunit protein A K02916 RP-L35; large subunit ribosomal protein L35
D CFU_0423 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CFU_5007 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CFU_5051 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CFU_5058 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CFU_5010 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CFU_5048 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CFU_5055 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CFU_5011 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D CFU_5047 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D CFU_5054 5S RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cfu00970]
D CFU_5044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CFU_5009 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CFU_5049 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CFU_5056 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CFU_5061 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CFU_5038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CFU_5019 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CFU_5028 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CFU_5037 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CFU_5024 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CFU_5059 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CFU_5026 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CFU_5033 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CFU_5005 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CFU_5042 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CFU_5043 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CFU_5032 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CFU_5034 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CFU_5002 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CFU_5046 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CFU_5040 tRNA-His K14226 tRNA-His; tRNA His
D CFU_5008 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CFU_5057 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CFU_5050 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CFU_5016 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CFU_5012 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CFU_5021 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CFU_5025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CFU_5022 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CFU_5027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CFU_5041 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CFU_5030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CFU_5035 tRNA-Met K14230 tRNA-Met; tRNA Met
D CFU_5036 tRNA-Met K14230 tRNA-Met; tRNA Met
D CFU_5045 tRNA-Met K14230 tRNA-Met; tRNA Met
D CFU_5013 tRNA-Met K14230 tRNA-Met; tRNA Met
D CFU_5052 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CFU_5018 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CFU_5029 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CFU_5053 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CFU_5031 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CFU_5020 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CFU_5023 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CFU_5039 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CFU_5014 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CFU_5003 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CFU_5006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CFU_5004 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CFU_5001 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CFU_5015 tRNA-Val K14237 tRNA-Val; tRNA Val
D CFU_5060 tRNA-Val K14237 tRNA-Val; tRNA Val
D CFU_5017 tRNA-Val K14237 tRNA-Val; tRNA Val
D CFU_3475 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CFU_4122 gatA; Aspartyl-tRNA(Asn) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CFU_2824 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CFU_4124 gatB; Aspartyl-tRNA(Asn) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CFU_4121 gatC; Aspartyl-tRNA(Asn) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CFU_1154 glnS; Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CFU_1158 ala; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CFU_0653 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CFU_3616 glyQ; Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CFU_3617 glyS; Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CFU_1500 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CFU_2681 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CFU_0817 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CFU_2340 cys2; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CFU_0088 cys; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CFU_3479 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CFU_3305 yfbG; hypothetical protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CFU_4109 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CFU_2464 arnA_FT; Polymyxin resistance protein ArnA_FT, UDP-4-amino-4-deoxy-L-arabinose formylase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CFU_0714 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CFU_3858 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CFU_3260 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CFU_3121 lysS; Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CFU_4276 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CFU_3893 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CFU_1916 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CFU_1505 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CFU_1507 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CFU_3960 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CFU_1676 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CFU_3819 trpS2; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cfu03060]
D CFU_0421 secY; Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D CFU_0387 secE; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CFU_1590 preprotein translocase IISP family, auxillary membrane component K03075 secG; preprotein translocase subunit SecG
D CFU_0766 secD; Protein-export membrane protein K03072 secD; preprotein translocase subunit SecD
D CFU_0767 secF; preprotein translocase, auxillary membrane component (General Secretory Pathway) K03074 secF; preprotein translocase subunit SecF
D CFU_0765 yajC; Preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D CFU_4448 OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CFU_3931 secA; Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CFU_4061 secB; Protein export cytoplasm chaperone protein K03071 secB; preprotein translocase subunit SecB
D CFU_3887 ffh; Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CFU_0582 ftsY; Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D CFU_0524 tatA; Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D CFU_0525 tatB; Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D CFU_0526 tatC; Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D CFU_2872 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CFU_3330 lepB2; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CFU_3261 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cfu04122]
D CFU_3130 iscS2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CFU_2173 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CFU_0729 sseA; putative 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CFU_1162 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D CFU_3637 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CFU_2309 moaE; Molybdopterin converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CFU_2895 moaA; Molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CFU_2310 moaD; Molybdopterin converting factor, small subunit K03636 moaD; sulfur-carrier protein
D CFU_4067 thiF; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D CFU_2957 mog; Molybdopterin biosynthesis mog protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 03050 Proteasome
C 03018 RNA degradation [PATH:cfu03018]
D CFU_3894 nudH; Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D CFU_2894 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D CFU_1252 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CFU_3063 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CFU_2491 rhlE2; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CFU_0196 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CFU_1036 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CFU_2347 vacB; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CFU_0844 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CFU_0873 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CFU_3847 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CFU_3721 mopA; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CFU_1920 hfq; RNA-binding protein K03666 hfq; host factor-I protein
D CFU_2515 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CFU_1279 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CFU_3839 pcnB; Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cfu03030]
D CFU_1468 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFU_1041 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CFU_2813 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CFU_1820 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CFU_3860 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CFU_0905 holC; putative DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CFU_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CFU_2482 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CFU_1026 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CFU_0475 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CFU_1467 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CFU_1345 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CFU_0726 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CFU_1295 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cfu03410]
D CFU_2519 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CFU_3134 conserved hypothetical protein; putative Uracil DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CFU_0617 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CFU_0615 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CFU_2339 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D CFU_3244 putative DNA-3-methyladenine glycosylase protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D CFU_4364 transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D CFU_4198 tag; DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CFU_2428 DNA polymerase, bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CFU_4127 xth; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CFU_3521 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CFU_0726 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CFU_3113 recJ; Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CFU_1295 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cfu03420]
D CFU_1790 mfd; Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CFU_0472 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CFU_3135 uvrB; Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CFU_2864 uvrC; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D CFU_0722 uvrD; ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CFU_0726 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CFU_1295 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CFU_2111 DinG family ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:cfu03430]
D CFU_1684 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CFU_3571 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CFU_0722 uvrD; ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CFU_1141 sbcB; Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D CFU_1216 xseA; Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CFU_0732 xseB; Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CFU_3113 recJ; Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CFU_0475 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CFU_1041 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CFU_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CFU_2813 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CFU_3860 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CFU_1820 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CFU_1468 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFU_0905 holC; putative DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CFU_1295 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CFU_1006 prophage PSPPH02, putative adenine modification methytransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:cfu03440]
D CFU_3113 recJ; Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CFU_0475 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CFU_2868 recO; DNA recombination and repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
D CFU_2811 recR; Recombination protein K06187 recR; recombination protein RecR
D CFU_3804 recA; RecA protein K03553 recA; recombination protein RecA
D CFU_0726 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CFU_0709 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CFU_0710 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CFU_3952 ruvC; Crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CFU_0761 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CFU_1041 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CFU_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CFU_2813 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CFU_3860 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CFU_1820 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CFU_1468 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFU_0905 holC; putative DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CFU_4371 priA; Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CFU_2485 priB; Primosomal replication protein N K02686 priB; primosomal replication protein N
C 03450 Non-homologous end-joining [PATH:cfu03450]
D CFU_1973 ligD; Ku domain protein K10979 ku; DNA end-binding protein Ku
D CFU_1974 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
D CFU_3581 TPR repeat protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:cfu03250]
D CFU_2341 ppiB; peptidyl-prolyl cis-trans isomerase B (rotamase B)-like protein K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cfu02010]
D CFU_3033 sbp; Sulfate-binding protein sbp K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D CFU_3013 cysT; Sulfate transport system permease protein cysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D CFU_3012 cysW; Sulfate transport system permease protein cysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D CFU_3011 cysA; Sulfate and thiosulfate import ATP-binding protein cysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D CFU_3975 nasF; Nitrate ABC transporter, nitrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D CFU_3974 nasE; Nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D CFU_3973 nasD; Nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D CFU_1950 tauA; Taurine-binding periplasmic protein K15551 tauA; taurine transport system substrate-binding protein
D CFU_1952 tauC; Taurine transport system permease protein K15552 tauC; taurine transport system permease protein
D CFU_1951 tauB; Taurine transport ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D CFU_2024 ssuA; aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CFU_3030 ssuA2; Alkanesulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CFU_3031 ssuA3; Alkanesulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CFU_2472 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15553 ssuA; sulfonate transport system substrate-binding protein
D CFU_2810 extracellular solute-binding protein, family 3 K15553 ssuA; sulfonate transport system substrate-binding protein
D CFU_2665 nitrate ABC transporter, periplasmic nitrate-binding protein, putative K15553 ssuA; sulfonate transport system substrate-binding protein
D CFU_3028 ssuC; Alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D CFU_2470 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein
D CFU_2666 Alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D CFU_2808 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D CFU_3027 ssuB2; Sulfonate ABC transporter, ATP-binding subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CFU_2809 ABC transporter related protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CFU_2667 ssuB; ABC-type putative sulfate transporter, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CFU_2471 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CFU_1564 modA; Molybdenum ABC transporter, periplasmic molybdenum-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CFU_2650 Hypothetical ABC transport system, periplasmic component K02020 modA; molybdate transport system substrate-binding protein
D CFU_2160 hypothetical protein K02020 modA; molybdate transport system substrate-binding protein
D CFU_3668 hypothetical protein K02020 modA; molybdate transport system substrate-binding protein
D CFU_1563 modB; Molybdenum transport system permease protein K02018 modB; molybdate transport system permease protein
D CFU_1562 modC; Molybdenum transport ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CFU_0635 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CFU_4437 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D CFU_0633 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D CFU_4436 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D CFU_0634 putative ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CFU_4435 potA3; Spermidine Putrescine transport ATP-binding protein potA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CFU_0650 potD; ABC transporter, periplasmic spermidine putrescine-binding protein potD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CFU_0649 potC; Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D CFU_0648 potB; spermidine/putrescine transport protein (ABC superfamily, membrane) K11071 potB; spermidine/putrescine transport system permease protein
D CFU_0647 potA; Spermidine Putrescine transport ATP-binding protein potA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CFU_1408 L-proline glycine betaine binding ABC transporter protein proX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D CFU_3086 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein
D CFU_3097 proX; Glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D CFU_3088 proW; L-proline Glycine Betaine ABC transport system permease protein proW K02001 proW; glycine betaine/proline transport system permease protein
D CFU_3089 proV2; L-proline Glycine Betaine ABC transport ATP-binding protein proV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D CFU_1458 opcC; Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D CFU_2121 yehZ; Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D CFU_1457 ABC glycine betaine/choline/proline family transporter, inner membrane subunit K05846 opuBD; osmoprotectant transport system permease protein
D CFU_1459 ABC-type proline/glycine betaine transport systems, permease component K05846 opuBD; osmoprotectant transport system permease protein
D CFU_2118 yehW; ABC type choline/glycine/betaine transporter, permease subunit K05846 opuBD; osmoprotectant transport system permease protein
D CFU_2120 yehY; Putative ABC transport integral membrane subunit K05846 opuBD; osmoprotectant transport system permease protein
D CFU_1460 proV; L-proline Glycine Betaine ABC transport ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CFU_2119 yehX; putative ABC transporter K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CFU_0295 malK; Maltose/maltodextrin transport ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CFU_1098 Various polyols ABC transporter, ATP-binding component K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CFU_1440 maltose ABC transporter, ATP-binding protein, putative K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CFU_2608 N-Acetyl-D-glucosamine ABC transport system, ATP-binding component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CFU_2605 N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D CFU_2606 N-Acetyl-D-glucosamine ABC transport system, permease protein 1 K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D CFU_2607 N-Acetyl-D-glucosamine ABC transport system, permease protein 2 K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D CFU_1102 smoE; ABC sugar transporter, periplasmic ligand binding protein K10227 smoE; polyol transport system substrate-binding protein
D CFU_1101 smoF; hypothetical protein K10228 smoF; polyol transport system permease protein
D CFU_1100 Various polyols ABC transporter, permease component 2 K10229 smoG; polyol transport system permease protein
D CFU_1303 chvE; sugar ABC transporter, periplasmic sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D CFU_1305 gguB; L-arabinose transport system permease protein K10547 gguB; putative multiple sugar transport system permease protein
D CFU_1304 gguA; Sugar ABC transporter K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CFU_0508 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 mlaC; phospholipid transport system substrate-binding protein
D CFU_4208 putative signal peptide protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CFU_0506 Uncharacterized ABC transporter, periplasmic component YrbD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CFU_1966 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CFU_4206 ABC-type transport system involved in resistance to organic solvents, permease component K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CFU_0505 putative transport protein (ABC superfamily, membrane) K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CFU_1967 ABC-type transport system, permease component K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CFU_0509 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D CFU_4207 putative ATP-binding component of ABC transporter precursor K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CFU_0504 ABC transport system ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CFU_4129 lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D CFU_0224 ABC-type transporter, periplasmic component K07335 bmpA; basic membrane protein A and related proteins
D CFU_0222 putative transmembrane ABC transporter protein K23535 nupB; general nucleoside transport system permease protein
D CFU_0223 putative transmembrane ABC transporter protein K23536 nupC; general nucleoside transport system permease protein
D CFU_0221 putative ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein
D CFU_1444 ABC-type sugar transport system, periplasmic component K17315 gtsA; glucose/mannose transport system substrate-binding protein
D CFU_2604 ABC-type sugar transport system, periplasmic component K17315 gtsA; glucose/mannose transport system substrate-binding protein
D CFU_1442 ABC transporter, membrane permease K17316 gtsB; glucose/mannose transport system permease protein
D CFU_1441 maltose ABC transporter, permease protein, putative K17317 gtsC; glucose/mannose transport system permease protein
D CFU_1929 rbsB; ABC sugar transporter, periplasmic ligand binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CFU_2951 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D CFU_2566 putative sugar ABC transporter, substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CFU_2104 putative fucose ABC transporter, substrate-binding component K10439 rbsB; ribose transport system substrate-binding protein
D CFU_4102 rbsB2; Ribose ABC transport system, periplasmic ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D CFU_1930 Ribose ABC transport system, permease protein K10440 rbsC; ribose transport system permease protein
D CFU_4100 rbsC2; Ribose ABC transport system, permease protein RbsC K10440 rbsC; ribose transport system permease protein
D CFU_2103 rbsC; putative fucose ABC transporter, permease component K10440 rbsC; ribose transport system permease protein
D CFU_4101 rbsA2; Ribose ABC transport system, ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CFU_2102 putative fucose ABC transporter, ATP-binding component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CFU_1931 rbsA; Ribose ABC transport system, ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CFU_2954 ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CFU_4097 rbsD; Ribose ABC transport system, high affinity permease RbsD K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D CFU_2333 ytfQ; periplasmic binding protein/LacI transcriptional regulator K23508 ytfQ; galactofuranose transport system substrate-binding protein
D CFU_2330 yjfF; putative sugar uptake ABC transporter permease protein K23509 ytfT; galactofuranose transport system permease protein
D CFU_2331 ytfT; inner-membrane translocator K23509 ytfT; galactofuranose transport system permease protein
D CFU_2332 ytfR; putative ABC transporter K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D CFU_3154 xylF; Xylose ABC transporter, periplasmic xylose-binding protein xylF K10543 xylF; D-xylose transport system substrate-binding protein
D CFU_3152 xylH; Xylose ABC transporter, permease protein xylH K10544 xylH; D-xylose transport system permease protein
D CFU_3153 xylG; D-xylose transport ATP-binding protein xylG K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D CFU_0335 ugpB; Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CFU_1205 ugpB2; Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CFU_0334 ugpA; SN-glycerol-3-phosphate transport system permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CFU_1204 ugpA2; SN-glycerol-3-phosphate transport system permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CFU_0333 ugpE; SN-glycerol-3-phosphate transport system permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CFU_1203 ugpE2; SN-glycerol-3-phosphate transport system permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CFU_1202 ugpC; SN-glycerol-3-phosphate transport ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D CFU_3110 Phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CFU_4361 pstS2; Phosphate ABC transporter, periplasmic phosphate-binding protein pstS K02040 pstS; phosphate transport system substrate-binding protein
D CFU_2513 pstS; Phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CFU_2512 pstC; Phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D CFU_2511 pstA; Phosphate transport system permease protein K02038 pstA; phosphate transport system permease protein
D CFU_2510 pstB; Phosphate transport ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CFU_4113 phnD; Phosphonate ABC transporter phosphate-binding periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein
D CFU_0185 phnD; Phosphonate ABC transporter phosphate-binding periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein
D CFU_4112 phnE; Phosphonate ABC transporter permease protein phnE K02042 phnE; phosphonate transport system permease protein
D CFU_4114 phnC; Phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D CFU_3981 Glutamate Aspartate periplasmic binding protein precursor gltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D CFU_3979 gltK; Glutamate Aspartate transport system permease protein gltK K10002 gltK; glutamate/aspartate transport system permease protein
D CFU_3980 gltJ; Glutamate Aspartate transport system permease protein gltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D CFU_3978 gltL; Glutamate/aspartate transport ATP-binding protein gltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D CFU_1281 putative amino acid ABC transporter, periplasmic-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D CFU_1280 putative amino acid ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D CFU_0684 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_0899 putative amino acid ABC transporter K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_0900 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_1805 ABC branched chain amino acid family transporter, periplasmic ligand binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_4013 ABC-type transporter, periplasmic component: HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_4073 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_4409 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_2937 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_2558 ABC-type transporter, periplasmic component: HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_2773 putative ABC transport protein, substrate-binding component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_3490 ABC-type transporter, periplasmic component: HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_0138 putative amino acid ABC transporter K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_0365 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_3545 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_1806 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D CFU_4072 putative amino-acid transmembrane ABC transporter protein K01997 livH; branched-chain amino acid transport system permease protein
D CFU_4408 ABC branched chain amino acid family transporter, inner membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D CFU_2938 putative amino-acid transmembrane lipoprotein ABC transporter K01997 livH; branched-chain amino acid transport system permease protein
D CFU_2560 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D CFU_2397 livH; High-affinity branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CFU_1237 livH; High-affinity branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CFU_1807 putative ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CFU_4071 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CFU_4407 ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein
D CFU_1238 livM; Branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CFU_2939 putative amino-acid transmembrane ABC transporter protein K01998 livM; branched-chain amino acid transport system permease protein
D CFU_2559 braE; inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D CFU_2396 putative amino acid transport system permease lipoprotein transmembrane K01998 livM; branched-chain amino acid transport system permease protein
D CFU_4411 putative ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CFU_2940 livG2; LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CFU_2561 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CFU_2395 putative ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CFU_1239 livG; high-affinity branched-chain amino acid transport protein (ABC superfamily, atp_bind) K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CFU_4070 livF2; Branched-chain amino acid transport ATP-binding protein livF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CFU_4410 putative ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CFU_1240 livF; Branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CFU_1808 putative ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CFU_2557 putative ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CFU_2941 putative amino-acid ATP-binding ABC transporter protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CFU_2394 putative amino-acid ATP-binding ABC transporter protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CFU_0698 metQ; Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CFU_1545 metQ2; Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CFU_3724 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CFU_0044 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CFU_1546 yaeE; Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D CFU_3723 metI; Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D CFU_1547 abc; Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CFU_3722 metN; Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CFU_2930 Urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein
D CFU_2846 Urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein
D CFU_2847 urtB; Urea ABC transporter, permease protein K11960 urtB; urea transport system permease protein
D CFU_2929 urtB2; Urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D CFU_2928 urtC2; Urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D CFU_2848 urtC; Urea ABC transporter, permease protein K11961 urtC; urea transport system permease protein
D CFU_2927 urtD2; Urea ABC transporter, ATPase protein UrtD K11962 urtD; urea transport system ATP-binding protein
D CFU_2849 urtD; Urea ABC transporter, ATPase protein K11962 urtD; urea transport system ATP-binding protein
D CFU_2850 urtE; Urea ABC transporter, ATPase protein K11963 urtE; urea transport system ATP-binding protein
D CFU_2926 urtE2; Urea ABC transporter, ATPase protein UrtE K11963 urtE; urea transport system ATP-binding protein
D CFU_2682 dppA; Dipeptide-binding ABC transporter, periplasmic substrate-binding component K12368 dppA; dipeptide transport system substrate-binding protein
D CFU_2692 dppA2; Dipeptide-binding ABC transporter, periplasmic substrate-binding component K12368 dppA; dipeptide transport system substrate-binding protein
D CFU_2690 dppB; Dipeptide transport system permease protein K12369 dppB; dipeptide transport system permease protein
D CFU_2689 dppC; Dipeptide transport system permease protein K12370 dppC; dipeptide transport system permease protein
D CFU_2688 dppD; Dipeptide transport ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D CFU_2686 dppF; Dipeptide transport ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D CFU_0595 yliB; extracellular solute-binding protein, family 5 K13889 gsiB; glutathione transport system substrate-binding protein
D CFU_0594 yliC; putative transmembrane ABC transporter protein K13890 gsiC; glutathione transport system permease protein
D CFU_0593 yliD; Dipeptide transport system permease protein dppC K13891 gsiD; glutathione transport system permease protein
D CFU_0596 yliA; Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal K13892 gsiA; glutathione transport system ATP-binding protein
D CFU_2298 periplasmic binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D CFU_2300 fhuB; Ferrichrome transport system permease protein fhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D CFU_2301 fecE; ABC cobalamin/Fe3+-siderophores transporter, ATPase subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D CFU_1119 wzm; O-antigen export system permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D CFU_1120 wzt; ABC subunit of A-band LPS efflux transporter K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CFU_3068 transport protein of outer membrane lipoproteins (ABC superfamily, membrane) K09808 lolC_E; lipoprotein-releasing system permease protein
D CFU_3067 lolD; Lipoprotein releasing system ATP-binding protein lolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CFU_3519 Putative membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D CFU_3518 putative Membrane protein; putative permease K11720 lptG; lipopolysaccharide export system permease protein
D CFU_0463 putative transport protein (ABC superfamily, atp_bind) K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CFU_0580 ftsX; Cell division protein ftsX K09811 ftsX; cell division transport system permease protein
D CFU_0581 ftsE; Cell division transporter, ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D CFU_1042 msbA; Lipid A export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CFU_1828 hlyB; putative ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D CFU_2674 cyaB; HlyB/MsbA family ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D CFU_3473 cvaB; toxin secretion ABC transporter, ATP-binding protein, putative K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D CFU_3985 ABC transporter ATP-binding cassette K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D CFU_1432 putative transport protein (ABC superfamily, ATP_bind) K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D CFU_3594 ABC transporter related protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D CFU_3095 macB; Macrolide export ATP-binding/permease protein macB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D CFU_2297 ABC-type siderophore export system, fused ATPase and permease components K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:cfu02060]
D CFU_4154 ptsI; Phosphoenolpyruvate-protein phosphotransferase of PTS system K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CFU_4155 ptsH; Phosphocarrier protein, nitrogen regulation associated K02784 ptsH; phosphocarrier protein HPr
D CFU_4156 manX; putative Phosphotransferase, mannose/fructose-specific component IIA family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CFU_0621 ptsN; PTS system nitrogen-specific IIA component, PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:cfu03070]
D CFU_0836 tolC; Type I secretion outer membrane protein, precursor K12340 tolC; outer membrane protein
D CFU_1831 tolC2; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D CFU_3474 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D CFU_2669 outer membrane efflux protein K12340 tolC; outer membrane protein
D CFU_2673 putative HlyD family secretion protein K11003 hlyD; membrane fusion protein, hemolysin D
D CFU_1830 hlyD; Type I secretion membrane fusion protein, HlyD K11003 hlyD; membrane fusion protein, hemolysin D
D CFU_1828 hlyB; putative ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D CFU_2674 cyaB; HlyB/MsbA family ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D CFU_4331 hrcC; HrcC K03219 yscC; type III secretion protein C
D CFU_4339 sctJ; Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) K03222 yscJ; type III secretion protein J
D CFU_4346 hrcR; Type III secretion inner membrane protein K03226 yscR; type III secretion protein R
D CFU_4347 hrcS; hrp-conserved HrcS transmembrane protein K03227 yscS; type III secretion protein S
D CFU_4334 hrcT; HrcT protein K03228 yscT; type III secretion protein T
D CFU_4342 hrcU; Type III secretion inner membrane protein K03229 yscU; type III secretion protein U
D CFU_4343 hrcV; Type III secretion inner membrane channel protein K03230 yscV; type III secretion protein V
D CFU_4336 hrcN; HrcN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D CFU_4345 hrcQ; HrcQ K03225 yscQ; type III secretion protein Q
D CFU_4337 sctL; Type III secretion inner membrane protein SctL K03223 yscL; type III secretion protein L
D CFU_4050 gspD; General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D CFU_4047 putative general secretion pathway transmembrane protein K02452 gspC; general secretion pathway protein C
D CFU_4048 gspF; General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D CFU_4058 gspG; General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D CFU_4057 gspH; General secretion pathway protein H K02457 gspH; general secretion pathway protein H
D CFU_4056 gspI; General secretion pathway protein I K02458 gspI; general secretion pathway protein I
D CFU_4055 gspJ; Type II secretory pathway component PulJ K02459 gspJ; general secretion pathway protein J
D CFU_4054 gspK; General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D CFU_4053 gspL; General secretion pathway protein L K02461 gspL; general secretion pathway protein L
D CFU_4052 gspM; General secretion pathway protein M K02462 gspM; general secretion pathway protein M
D CFU_4049 gspE; General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D CFU_2565 putative secretion pathway ATPase K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D CFU_0766 secD; Protein-export membrane protein K03072 secD; preprotein translocase subunit SecD
D CFU_0767 secF; preprotein translocase, auxillary membrane component (General Secretory Pathway) K03074 secF; preprotein translocase subunit SecF
D CFU_0387 secE; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CFU_1590 preprotein translocase IISP family, auxillary membrane component K03075 secG; preprotein translocase subunit SecG
D CFU_0421 secY; Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D CFU_0765 yajC; Preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D CFU_4448 OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CFU_3931 secA; Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CFU_0582 ftsY; Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D CFU_4061 secB; Protein export cytoplasm chaperone protein K03071 secB; preprotein translocase subunit SecB
D CFU_3887 ffh; Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CFU_0524 tatA; Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D CFU_0525 tatB; Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D CFU_0526 tatC; Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D CFU_0079 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CFU_0063 vrgS; hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CFU_2806 putative Vgr-related protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CFU_0024 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CFU_1070 putative vgr related protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CFU_4280 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CFU_0538 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CFU_0688 Hypothetical Protein K11903 hcp; type VI secretion system secreted protein Hcp
D CFU_3217 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D CFU_0072 Putative cytoplasmic protein USSDB7A K11903 hcp; type VI secretion system secreted protein Hcp
D CFU_0076 putative transmembrane protein K11906 vasD; type VI secretion system protein VasD
D CFU_0058 putative transmembrane protein K11891 impL; type VI secretion system protein ImpL
D CFU_0078 putative transmembrane protein K11892 impK; type VI secretion system protein ImpK
D CFU_0068 clpB; ClpB protein K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cfu02020]
D CFU_2493 phoR; Phosphate regulon sensor protein phoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CFU_2507 phoR2; Phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CFU_2494 phoB; Phosphate regulon transcriptional regulatory protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D CFU_2508 phoB2; Phosphate regulon transcriptional regulatory protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D CFU_3890 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CFU_3891 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CFU_4068 phoD; Alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CFU_3648 Alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CFU_3110 Phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CFU_4361 pstS2; Phosphate ABC transporter, periplasmic phosphate-binding protein pstS K02040 pstS; phosphate transport system substrate-binding protein
D CFU_2513 pstS; Phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CFU_0243 phoN; putative acid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D CFU_1793 envZ; Osmolarity sensory histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D CFU_1794 ompR; Two-component system response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D CFU_2875 mucD; Serine protease precursor MucD/AlgY associated with sigma factor RpoE K04771 degP; serine protease Do [EC:3.4.21.107]
D CFU_3314 putative periplasmic serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CFU_4245 creC; Two-component response regulator CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D CFU_4244 creB; two component transcriptional regulator, winged helix family K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D CFU_2722 putative RND efflux membrane fusion protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D CFU_1246 hlyD3; secretion protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D CFU_1185 putative resistance transmembrane protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D CFU_1184 hypothetical protein K07788 mdtB; multidrug efflux pump
D CFU_1183 mdtC; Transmembrane drug efflux pump K07789 mdtC; multidrug efflux pump
D CFU_2528 signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CFU_0184 sensor kinase protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CFU_1243 Heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CFU_2527 putative response regulator for cobalt zinc cadmium resistance transcription regulator protein K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CFU_0183 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CFU_1244 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CFU_0978 flhD; Flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D CFU_0979 flhC; Flagellar transcriptional activator K02402 flhC; flagellar transcriptional activator FlhC
D CFU_0967 flgL; Flagellar biosynthesis protein K02406 fliC; flagellin
D CFU_0934 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D CFU_0980 motA; Flagellar motor rotation protein K02556 motA; chemotaxis protein MotA
D CFU_1320 kdpD; Osmosensitive K+ channel histidine kinase kdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CFU_1321 kdpE; DNA-binding response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CFU_1316 kdpA; Potassium-transporting ATPase A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D CFU_1317 kdpB; Potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D CFU_1318 kdpC; Potassium-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D CFU_1535 ATP-binding region, ATPase-like:Histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D CFU_4440 tctE; integral membrane sensor signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D CFU_2474 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D CFU_1197 periplasmic sensor signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D CFU_4439 tctD; DNA-binding response regulator TctD K07774 tctD; two-component system, OmpR family, response regulator TctD
D CFU_1198 two-component response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D CFU_2473 putative response regulator protein K07774 tctD; two-component system, OmpR family, response regulator TctD
D CFU_4438 tctC; putative exported protein K07795 tctC; putative tricarboxylic transport membrane protein
D CFU_0563 ctaA; Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D CFU_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D CFU_2335 membrane protein, putative K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D CFU_1742 citE; Citrate lyase beta chain K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D CFU_2934 algZ; Two-component system sensor ATPase precursor K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D CFU_2933 putative two component system response regulator (LyR/AlgR family) K08083 algR; two-component system, LytTR family, response regulator AlgR
D CFU_4367 Two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D CFU_4368 rcsB; DNA-binding response regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D CFU_0973 Two Component Transcriptional Regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D CFU_3425 vsrD; Response regulator protein VsrD (LuxRfamily) K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D CFU_3587 bvgS; Hybrid sensory histidine kinase in two-component regulatory system with EvgA K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D CFU_3588 bvgA; DNA-binding response regulator, LuxR family K07690 evgA; two-component system, NarL family, response regulator EvgA
D CFU_3522 ampC; Beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D CFU_1080 desA; fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D CFU_1641 putative signal peptide protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D CFU_2414 Protein U precursor K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D CFU_2417 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D CFU_2415 papD; putative pilus assembly protein chaperone K07346 fimC; fimbrial chaperone protein
D CFU_1577 Fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein
D CFU_1578 bcfC; Outer membrane usher protein K07347 fimD; outer membrane usher protein
D CFU_2416 fimD; putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D CFU_3575 htrE; Putative fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D CFU_0852 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D CFU_0854 cpaB; Flp pilus assembly protein K02279 cpaB; pilus assembly protein CpaB
D CFU_2222 flp pilus assembly protein secretin K02280 cpaC; pilus assembly protein CpaC
D CFU_0855 cpaC; Type II/IV secretion system secretin, associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
D CFU_0856 cpaE; Flp pilus assembly protein, ATPase K02282 cpaE; pilus assembly protein CpaE
D CFU_2220 tadA; flp pilus assembly ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CFU_0857 cpaF; type II secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CFU_2219 tadB; type II secretion system protein K12510 tadB; tight adherence protein B
D CFU_0858 hypothetical protein K12510 tadB; tight adherence protein B
D CFU_2218 tadC2; flp pilus assembly protein K12511 tadC; tight adherence protein C
D CFU_0859 tadC; Flp pilus assembly protein K12511 tadC; tight adherence protein C
D CFU_0860 Flp pilus assembly protein, contains TPR repeats K27079 tadD; tight adherence protein D
D CFU_0862 putative transmembrane protein K27080 tadG; tight adherence protein G
D CFU_1329 glnD; [Protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D CFU_2751 glnK; Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D CFU_3537 ntrB; Nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D CFU_3536 ntrC; Nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D CFU_0571 atoS; putative two-component sensor kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D CFU_0570 putative two-component response regulator containing CheY-like receiver K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D CFU_4265 fadA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_3460 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_0489 bktB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_1212 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_2253 dctB; Transporter K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D CFU_2251 dctD; Nitrogen regulation protein NR(I) K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D CFU_1421 Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate K11103 dctA; aerobic C4-dicarboxylate transport protein
D CFU_3020 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D CFU_3883 pilS; two-component sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D CFU_3880 pilR; type 4 fimbriae expression regulatory protein K02667 pilR; two-component system, NtrC family, response regulator PilR
D CFU_0462 rpoN; sigma N (sigma 54) factor of RNA polymerase K03092 rpoN; RNA polymerase sigma-54 factor
D CFU_3797 Fimbrial protein ecpC precursor (Pilin) K02650 pilA; type IV pilus assembly protein PilA
D CFU_4446 Type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
D CFU_0925 cheR; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CFU_2659 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CFU_0923 tar; Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CFU_0975 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D CFU_2365 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CFU_2366 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CFU_0924 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CFU_0974 cheW; Positive regulator of CheA protein activity K03408 cheW; purine-binding chemotaxis protein CheW
D CFU_0984 cheW2; Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D CFU_0983 cheA2; Chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CFU_0928 cheY; Chemotaxis regulator - transmits chemoreceptor signals to flagellar motor components K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CFU_0982 cheY2; Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CFU_0927 cheB; Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CFU_0796 pilJ; twitching motility protein K02660 pilJ; twitching motility protein PilJ
D CFU_0795 pilI; type IV pili signal transduction protein K02659 pilI; twitching motility protein PilI
D CFU_0797 cheA; Chemotaxis protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D CFU_0793 pilG; twitching motility protein K02657 pilG; twitching motility two-component system response regulator PilG
D CFU_0794 pilH; twitching motility protein K02658 pilH; twitching motility two-component system response regulator PilH
D CFU_2369 wspC; putative protein methyltransferase K13486 wspC; chemotaxis protein methyltransferase WspC
D CFU_2367 wspA; methyl-accepting chemotaxis sensory transducer K13487 wspA; methyl-accepting chemotaxis protein WspA
D CFU_2368 wspB; Chemotaxis signal transduction protein K13488 wspB; chemotaxis-related protein WspB
D CFU_2370 wspD; Chemotaxis signal transduction protein K13489 wspD; chemotaxis-related protein WspD
D CFU_2371 CheA signal transduction histidine kinase K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D CFU_2372 cheB2; Chemotaxis response regulator protein-glutamate methylesterase 4 K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61]
D CFU_2373 wspR; Two-component response regulator K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65]
D CFU_1984 divK; putative two component transcriptional regulator K11443 divK; two-component system, cell cycle response regulator DivK
D CFU_0154 signal transduction histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D CFU_1707 TRAP dicarboxylate transporter, DctM subunit, unknown substrate 4 K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D CFU_3978 gltL; Glutamate/aspartate transport ATP-binding protein gltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D CFU_3979 gltK; Glutamate Aspartate transport system permease protein gltK K10002 gltK; glutamate/aspartate transport system permease protein
D CFU_3980 gltJ; Glutamate Aspartate transport system permease protein gltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D CFU_3981 Glutamate Aspartate periplasmic binding protein precursor gltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D CFU_2563 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CFU_2202 putative Two-component sensor K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D CFU_2201 putative Two-component response regulator K15012 regA; two-component system, response regulator RegA
D CFU_0660 petA; Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CFU_0661 petB; Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CFU_0662 petC; ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D CFU_0898 nirM; Cytochrome c551/c552 K08738 CYC; cytochrome c
D CFU_2762 cydA; Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CFU_2763 cydB; Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CFU_0836 tolC; Type I secretion outer membrane protein, precursor K12340 tolC; outer membrane protein
D CFU_1831 tolC2; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D CFU_3474 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D CFU_2669 outer membrane efflux protein K12340 tolC; outer membrane protein
D CFU_1989 wza; polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D CFU_2736 Capsule polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D CFU_1990 wzb; Low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D CFU_1991 wzc; Tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CFU_3660 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CFU_2730 egl; putative endoglucanase precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D CFU_1956 pmlI; Autoinducer synthesis protein K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184]
D CFU_2708 hurI; RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CFU_2707 fecR; Fe2+-dicitrate sensor, membrane component K07165 fecR; transmembrane sensor
D CFU_0937 flgM; Negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D CFU_0660 petA; Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cfu02024]
D CFU_0155 7-Keto-8-aminopelargonate synthetase-like protein K10915 cqsA; CAI-1 autoinducer synthase [EC:2.3.-.-]
D CFU_0154 signal transduction histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D CFU_1920 hfq; RNA-binding protein K03666 hfq; host factor-I protein
D CFU_0702 trpE; Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CFU_0701 trpG; Anthranilate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CFU_1956 pmlI; Autoinducer synthesis protein K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184]
D CFU_1540 Neutral protease precursor K01399 lasB; pseudolysin [EC:3.4.24.26]
D CFU_3237 aroG; 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CFU_0978 flhD; Flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D CFU_0979 flhC; Flagellar transcriptional activator K02402 flhC; flagellar transcriptional activator FlhC
D CFU_1321 kdpE; DNA-binding response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CFU_3773 putative periplasmic solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CFU_4381 potD2; ABC transporter, periplasmic spermidine putrescine-binding protein potD K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CFU_4379 potC2; Spermidine Putrescine ABC transporter permease component potC K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CFU_3771 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CFU_3772 ABC-type transporter, permease component: MolT family K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CFU_4380 potB2; Spermidine Putrescine ABC transporter permease component potB K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CFU_3770 ABC transporter K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CFU_4382 potA2; Spermidine Putrescine transport ATP-binding protein potA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CFU_0684 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_0899 putative amino acid ABC transporter K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_0900 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_1805 ABC branched chain amino acid family transporter, periplasmic ligand binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_4013 ABC-type transporter, periplasmic component: HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_4073 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_4409 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_2937 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_2558 ABC-type transporter, periplasmic component: HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_2773 putative ABC transport protein, substrate-binding component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_3490 ABC-type transporter, periplasmic component: HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_0138 putative amino acid ABC transporter K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_0365 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_3545 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_1806 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D CFU_4072 putative amino-acid transmembrane ABC transporter protein K01997 livH; branched-chain amino acid transport system permease protein
D CFU_4408 ABC branched chain amino acid family transporter, inner membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D CFU_2938 putative amino-acid transmembrane lipoprotein ABC transporter K01997 livH; branched-chain amino acid transport system permease protein
D CFU_2560 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D CFU_2397 livH; High-affinity branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CFU_1237 livH; High-affinity branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CFU_1807 putative ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CFU_4071 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CFU_4407 ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein
D CFU_1238 livM; Branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CFU_2939 putative amino-acid transmembrane ABC transporter protein K01998 livM; branched-chain amino acid transport system permease protein
D CFU_2559 braE; inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D CFU_2396 putative amino acid transport system permease lipoprotein transmembrane K01998 livM; branched-chain amino acid transport system permease protein
D CFU_4411 putative ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CFU_2940 livG2; LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CFU_2561 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CFU_2395 putative ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CFU_1239 livG; high-affinity branched-chain amino acid transport protein (ABC superfamily, atp_bind) K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CFU_4070 livF2; Branched-chain amino acid transport ATP-binding protein livF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CFU_4410 putative ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CFU_1240 livF; Branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CFU_1808 putative ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CFU_2557 putative ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CFU_2941 putative amino-acid ATP-binding ABC transporter protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CFU_2394 putative amino-acid ATP-binding ABC transporter protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CFU_3600 Large repetitive protein K20276 bapA; large repetitive protein
D CFU_2562 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFU_3992 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFU_3993 lcfA; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFU_1209 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFU_2563 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CFU_2258 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CFU_3396 ribD; 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CFU_0832 Outer membrane protein of RND family multidrug efflux pump K18139 oprM; outer membrane protein, multidrug efflux system
D CFU_0319 ophA; ABC peptide/opine/nickel family transporter, periplasmic ligand binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CFU_1803 putative dipeptide transport binding transmembrane protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CFU_4002 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CFU_3178 hbpA3; heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CFU_4001 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CFU_3180 putative ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CFU_0320 ophB; binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CFU_3181 appC; putative ABC trasporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CFU_0321 ophC; ABC peptide transporter, inner membrane subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CFU_0322 ABC peptide/opine/nickel family transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CFU_3182 putative ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CFU_3998 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CFU_3997 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CFU_4448 OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CFU_0387 secE; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CFU_1590 preprotein translocase IISP family, auxillary membrane component K03075 secG; preprotein translocase subunit SecG
D CFU_0421 secY; Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D CFU_0765 yajC; Preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D CFU_3931 secA; Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CFU_0582 ftsY; Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D CFU_4061 secB; Protein export cytoplasm chaperone protein K03071 secB; preprotein translocase subunit SecB
D CFU_3887 ffh; Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CFU_0674 plcN; Phosphoesterase K01114 plc; phospholipase C [EC:3.1.4.3]
D CFU_3159 plcN2; Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CFU_0341 Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CFU_0030 non-hemolytic phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:cfu02030]
D CFU_2659 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CFU_0923 tar; Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CFU_0975 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D CFU_2365 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CFU_2366 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CFU_0924 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CFU_1929 rbsB; ABC sugar transporter, periplasmic ligand binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CFU_2951 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D CFU_2566 putative sugar ABC transporter, substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CFU_2104 putative fucose ABC transporter, substrate-binding component K10439 rbsB; ribose transport system substrate-binding protein
D CFU_4102 rbsB2; Ribose ABC transport system, periplasmic ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D CFU_2682 dppA; Dipeptide-binding ABC transporter, periplasmic substrate-binding component K12368 dppA; dipeptide transport system substrate-binding protein
D CFU_2692 dppA2; Dipeptide-binding ABC transporter, periplasmic substrate-binding component K12368 dppA; dipeptide transport system substrate-binding protein
D CFU_0983 cheA2; Chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CFU_0974 cheW; Positive regulator of CheA protein activity K03408 cheW; purine-binding chemotaxis protein CheW
D CFU_0984 cheW2; Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D CFU_0928 cheY; Chemotaxis regulator - transmits chemoreceptor signals to flagellar motor components K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CFU_0982 cheY2; Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CFU_0929 cheZ; Chemotaxis response - phosphatase K03414 cheZ; chemotaxis protein CheZ
D CFU_0927 cheB; Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CFU_0926 cheD; Chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D CFU_0925 cheR; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CFU_0963 fliG; Flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D CFU_0957 fliL; Flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D CFU_0956 fliM; Flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CFU_0980 motA; Flagellar motor rotation protein K02556 motA; chemotaxis protein MotA
D CFU_0981 motB; Flagellar motor rotation protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:cfu02040]
D CFU_0965 fliE; Flagellar hook-basal body complex protein K02408 fliE; flagellar hook-basal body complex protein FliE
D CFU_0964 fliF; Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D CFU_0963 fliG; Flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D CFU_0962 fliH; Flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D CFU_0961 fliI; Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CFU_0960 fliJ; Flagellar protein K02413 fliJ; flagellar protein FliJ
D CFU_0959 Flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D CFU_0958 fliK; Flagellar biosynthesis protein K02415 fliL; flagellar protein FliL
D CFU_0957 fliL; Flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D CFU_0956 fliM; Flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CFU_0955 fliN; Flagellar biosynthesis protein K02418 fliO; flagellar protein FliO/FliZ
D CFU_0954 fliP; Flagellar biosynthesis protein K02419 fliP; flagellar biosynthesis protein FliP
D CFU_0953 Flagellar biosynthesis protein K02420 fliQ; flagellar biosynthesis protein FliQ
D CFU_0952 fliR; Flagellar biosynthesis protein K02421 fliR; flagellar biosynthesis protein FliR
D CFU_0935 flhE; Flagellar protein K03516 flhE; flagellar protein FlhE
D CFU_0931 flhA; Flagellar biosynthesis protein flhA K02400 flhA; flagellar biosynthesis protein FlhA
D CFU_0930 flhB; Flagellar biosynthesis protein flhB K02401 flhB; flagellar biosynthesis protein FlhB
D CFU_0938 flgA; Flagellar basal-body P-ring formation protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D CFU_0940 flgB; Flagellar basal-body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D CFU_0941 flgC; Flagellar basal-body rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D CFU_0942 flgD; Flagellar basal-body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D CFU_0943 flgE; Flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D CFU_0944 flgF; Flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D CFU_0945 flg; Flagellar basal-body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D CFU_0946 flgH; Flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D CFU_0947 flgI; Flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D CFU_0948 flgJ; Flagellar protein peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ
D CFU_0949 flgK; Flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D CFU_0950 Flagellar hook-associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D CFU_0967 flgL; Flagellar biosynthesis protein K02406 fliC; flagellin
D CFU_0969 fliD; Flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2
D CFU_0970 fliS; Flagellar biosynthesis protein K02422 fliS; flagellar secretion chaperone FliS
D CFU_0980 motA; Flagellar motor rotation protein K02556 motA; chemotaxis protein MotA
D CFU_0981 motB; Flagellar motor rotation protein K02557 motB; chemotaxis protein MotB
D CFU_0937 flgM; Negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
D CFU_0936 flgN; Flagellar biosynthesis protein K02399 flgN; flagellar biosynthesis protein FlgN
D CFU_1281 putative amino acid ABC transporter, periplasmic-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D CFU_1025 rpoD; RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D CFU_0978 flhD; Flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D CFU_0979 flhC; Flagellar transcriptional activator K02402 flhC; flagellar transcriptional activator FlhC
D CFU_0462 rpoN; sigma N (sigma 54) factor of RNA polymerase K03092 rpoN; RNA polymerase sigma-54 factor
D CFU_0934 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CFU_1252 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:cfu04980]
D CFU_0736 Cob(I)alamin adenosyltransferase PduO K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CFU_4139 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cfu01501]
D CFU_4151 AmpG-like permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D CFU_2979 putative signal transducer K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D CFU_2865 hexII; N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CFU_2980 hexI; N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CFU_1377 ampR; transcriptional regulator, LysR family K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D CFU_3522 ampC; Beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D CFU_1378 penA; Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CFU_0834 acrA; Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D CFU_0833 Inner membrane efflux transporter of RND family multidrug efflux pump K18138 acrB; multidrug efflux pump
D CFU_0832 Outer membrane protein of RND family multidrug efflux pump K18139 oprM; outer membrane protein, multidrug efflux system
D CFU_0836 tolC; Type I secretion outer membrane protein, precursor K12340 tolC; outer membrane protein
D CFU_1831 tolC2; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D CFU_3474 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D CFU_2669 outer membrane efflux protein K12340 tolC; outer membrane protein
D CFU_2815 mrcA2; Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CFU_0452 mrcA; Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CFU_4117 mrdA; Putative Penicillin-binding protein 2 (PBP-2) (MrdA) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CFU_3948 ftsI; Cell division protein ftsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cfu01502]
D CFU_3940 ddlB; D-alanine-D-alanine ligase B, affects cell division K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CFU_4227 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CFU_2424 dadX; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CFU_3946 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CFU_3945 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CFU_3942 murG; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cfu01503]
D CFU_2463 arnC; Polymyxin resistance protein ArnC, glycosyl transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D CFU_2466 pmrJ; Polymyxin resistance protein PmrJ, putative deacetylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D CFU_1540 Neutral protease precursor K01399 lasB; pseudolysin [EC:3.4.24.26]
D CFU_3569 amiC; N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CFU_2875 mucD; Serine protease precursor MucD/AlgY associated with sigma factor RpoE K04771 degP; serine protease Do [EC:3.4.21.107]
D CFU_3314 putative periplasmic serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CFU_4274 dsbA; Periplasmic thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D CFU_2341 ppiB; peptidyl-prolyl cis-trans isomerase B (rotamase B)-like protein K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CFU_0834 acrA; Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D CFU_0833 Inner membrane efflux transporter of RND family multidrug efflux pump K18138 acrB; multidrug efflux pump
D CFU_0836 tolC; Type I secretion outer membrane protein, precursor K12340 tolC; outer membrane protein
D CFU_1831 tolC2; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D CFU_3474 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D CFU_2669 outer membrane efflux protein K12340 tolC; outer membrane protein
D CFU_1343 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CFU_2335 membrane protein, putative K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cfu01000]
C 01001 Protein kinases [BR:cfu01001]
D CFU_1948 hipA; HipA-like protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CFU_1991 wzc; Tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CFU_2734 yveL; Protein-tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D CFU_2493 phoR; Phosphate regulon sensor protein phoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CFU_2507 phoR2; Phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CFU_1793 envZ; Osmolarity sensory histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D CFU_4245 creC; Two-component response regulator CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D CFU_2528 signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CFU_0184 sensor kinase protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CFU_1243 Heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CFU_1320 kdpD; Osmosensitive K+ channel histidine kinase kdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CFU_1535 ATP-binding region, ATPase-like:Histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D CFU_4440 tctE; integral membrane sensor signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D CFU_2474 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D CFU_1197 periplasmic sensor signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D CFU_3312 qseC2; Sensory histidine kinase QseC K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CFU_0240 qseC; Sensory histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CFU_1193 Signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CFU_3092 ygiY; periplasmic sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CFU_3346 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CFU_3587 bvgS; Hybrid sensory histidine kinase in two-component regulatory system with EvgA K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D CFU_4288 Sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D CFU_2934 algZ; Two-component system sensor ATPase precursor K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D CFU_3537 ntrB; Nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D CFU_0571 atoS; putative two-component sensor kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D CFU_3883 pilS; two-component sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D CFU_2253 dctB; Transporter K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D CFU_0983 cheA2; Chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CFU_0797 cheA; Chemotaxis protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D CFU_2371 CheA signal transduction histidine kinase K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D CFU_0154 signal transduction histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D CFU_2202 putative Two-component sensor K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cfu01009]
D CFU_4028 acyH; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CFU_2544 htpG; Chaperone protein K04079 HSP90A; molecular chaperone HtpG
D CFU_2453 pphA; putative Serine/threonine specific protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D CFU_3799 putative Protein phosphatase 1 K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D CFU_0128 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D CFU_1759 hypothetical protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D CFU_1789 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:cfu01002]
D CFU_3261 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CFU_3924 pilD; Leader peptidase (Prepilin peptidase) K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CFU_0853 putative membrane protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CFU_4186 pcp; pyroglutamyl peptidase C15 K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D CFU_1359 guaA; GMP synthase glutamine-hydrolyzing K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CFU_0385 yvdE; Glutamine amidotransferase, class I K07010 K07010; putative glutamine amidotransferase
D CFU_3473 cvaB; toxin secretion ABC transporter, ATP-binding protein, putative K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D CFU_1879 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CFU_0502 gltB; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CFU_2981 nagB1; sugar isomeraese K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CFU_2611 nagB2; sugar isomerase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CFU_0370 glmS; Glucosamine--fructose-6-phosphate aminotransferase isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CFU_1970 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
D CFU_3209 ThiJ/PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124]
D CFU_1980 ThiJ/PfpI K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D CFU_2096 hypothetical protein K07052 K07052; CAAX protease family protein
D CFU_0055 Abortive infection protein K07052 K07052; CAAX protease family protein
D CFU_1059 pepN; Membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CFU_0907 prlC; oligopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D CFU_4433 dcp2; peptidyl-dipeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D CFU_0175 dcp; Peptidyl-dipeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D CFU_1540 Neutral protease precursor K01399 lasB; pseudolysin [EC:3.4.24.26]
D CFU_3655 pepO; peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D CFU_3358 hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CFU_0057 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D CFU_2972 pqqL; Peptidase M16, C-terminal:Peptidase M16, N-terminal K07263 pqqL; zinc protease [EC:3.4.24.-]
D CFU_3520 pepA; Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CFU_3105 Microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CFU_2660 Carboxypeptidase G2 precursor K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D CFU_1383 glutamate carboxypepticase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D CFU_1286 dapE; N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CFU_4228 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CFU_0263 map2; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CFU_1330 map; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CFU_2256 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CFU_2693 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CFU_3629 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CFU_3669 hypothetical protein K19689 ampS; aminopeptidase [EC:3.4.11.-]
D CFU_3438 extracellular protease K08646 MEP; peptidyl-Lys metalloendopeptidase [EC:3.4.24.20]
D CFU_2497 ftsH; Cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CFU_3229 peptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D CFU_1673 heat shock protease, integral membrane protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D CFU_0054 putative lipoprotein K07387 K07387; metalloprotease [EC:3.4.24.-]
D CFU_3794 putative peptidase family M48 protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D CFU_1338 Membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D CFU_0591 D-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D CFU_0592 dmpA; aminopeptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D CFU_2875 mucD; Serine protease precursor MucD/AlgY associated with sigma factor RpoE K04771 degP; serine protease Do [EC:3.4.21.107]
D CFU_3314 putative periplasmic serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CFU_0529 putative HtrA-like serine protease K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D CFU_3170 prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D CFU_0200 Prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D CFU_0199 ptrB; Oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D CFU_4214 dac; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CFU_3039 pbpG; Penicillin-binding protein precursor (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase) K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D CFU_3703 dacB; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CFU_1544 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CFU_2441 clpP2; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CFU_2439 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CFU_2487 lexA; SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D CFU_2872 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CFU_3330 lepB2; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CFU_0135 pip; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CFU_4066 Carboxy-terminal processing protease precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CFU_2580 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CFU_0249 prc; carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CFU_1201 Penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D CFU_2889 sohB; putative signal peptide peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D CFU_2834 Xanthomonapepsin precursor K05998 E3.4.21.100; pseudomonalisin [EC:3.4.21.100]
D CFU_0252 kscP; Kumamolysin K08677 kscP; kumamolisin [EC:3.4.21.123]
D CFU_1376 ldcA; L, D-carboxypeptidase A (in murein recycling) K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CFU_3366 head maturation protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D CFU_4045 ATP-dependent protease hslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D CFU_3557 20S proteasome, A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D CFU_0597 ansA; Isoaspartyl aminopeptidase @ Asp-X dipeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D CFU_0348 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CFU_2169 ggt2; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CFU_1727 ggtA; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CFU_3805 ggt3; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CFU_2955 pmbA; PmbA protein K03592 pmbA; PmbA protein
D CFU_3250 tldD; TldD protein, probably a protease K03568 tldD; TldD protein
D CFU_3344 alpha-2-macroglobulin domain protein K06894 yfhM; alpha-2-macroglobulin
D CFU_1923 hflC; HflC protein K04087 hflC; modulator of FtsH protease HflC
D CFU_1922 hflK; HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:cfu01003]
D CFU_3581 TPR repeat protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D CFU_1768 putative glycosyltransferase K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
D CFU_4282 ugtP; UDP-N-acetylglucosamine/LPS N-acetylglucosamine transferase-like protein K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CFU_0788 mtgA; Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CFU_3343 Multimodular transpeptidase-transglycosylase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D CFU_3342 pbpC; Multimodular transpeptidase-transglycosylase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D CFU_2815 mrcA2; Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CFU_0452 mrcA; Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CFU_1430 mdoH; Glucans biosynthesis glucosyltransferase H K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D CFU_1716 ndvB; Cyclic beta-1,2-glucan synthase K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
D CFU_2727 gumM; GumM protein K13660 gumM; beta-1,4-glucosyltransferase [EC:2.4.1.-]
D CFU_2732 gumH; GumH K13657 gumH; alpha-1,3-mannosyltransferase [EC:2.4.1.252]
D CFU_3715 otsA2; Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D CFU_1479 otsA; Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cfu01005]
D CFU_1343 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CFU_1344 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CFU_3934 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D CFU_1341 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CFU_2343 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CFU_1220 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CFU_4031 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CFU_4032 htrB; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CFU_3214 aspH; Fe(2+)/alpha-ketoglutarate-dependent dioxygenase lpxO K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D CFU_0828 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CFU_4005 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D CFU_1251 kdsA; 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CFU_1222 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CFU_0466 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CFU_0467 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CFU_3743 rfaE; ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D CFU_4010 rfaE2; D-glycero-beta-D-manno-heptose 7-phosphate kinase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D CFU_0815 rfaC; Lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D CFU_0830 rfaL; membrane spanning protein involved in lipopolysaccharide biosynthesis K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D CFU_4174 lpcA; Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CFU_0041 gmhA; Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CFU_3618 putative Histidinol-phosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cfu01011]
D CFU_0513 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CFU_3234 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CFU_3941 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CFU_3944 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CFU_3307 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CFU_3947 murE2; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CFU_3940 ddlB; D-alanine-D-alanine ligase B, affects cell division K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CFU_4227 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CFU_2424 dadX; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CFU_3354 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CFU_1376 ldcA; L, D-carboxypeptidase A (in murein recycling) K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CFU_3945 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CFU_3942 murG; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CFU_0842 bacA; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CFU_0843 bacA2; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CFU_1195 ybjG; Phosphoesterase, PA-phosphatase-like protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CFU_3273 mviN; Virulence factor, mviN-like protein K03980 murJ; putative peptidoglycan lipid II flippase
D CFU_2815 mrcA2; Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CFU_0452 mrcA; Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CFU_3343 Multimodular transpeptidase-transglycosylase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D CFU_3342 pbpC; Multimodular transpeptidase-transglycosylase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D CFU_4117 mrdA; Putative Penicillin-binding protein 2 (PBP-2) (MrdA) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CFU_3948 ftsI; Cell division protein ftsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CFU_4214 dac; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CFU_3703 dacB; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CFU_3039 pbpG; Penicillin-binding protein precursor (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase) K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D CFU_0788 mtgA; Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CFU_3358 hypothetical protein K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CFU_0057 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D CFU_4024 Soluble lytic murein transglycosylase precursor K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CFU_0706 mltA; Putative Membrane-bound lytic murein transglycosylase MltA family K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D CFU_3736 mltB; membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D CFU_1464 Membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D CFU_1818 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CFU_4115 rlpA; Rare lipoprotein A precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CFU_3569 amiC; N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CFU_3879 ampD; N-acetylmuramoyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cfu01004]
D CFU_1715 mdcH; Malonyl CoA acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CFU_2882 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CFU_1700 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III C terminal K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CFU_2883 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CFU_1900 3-oxoacyl-[acyl-carrier-protein] synthase, FabV inferred for ABFAE pathway K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CFU_1902 3-oxoacyl-[acyl-carrier-protein] synthase, inferred for ABFAE pathway K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CFU_2879 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CFU_1089 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CFU_2216 Short-chain type dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_1903 3-oxoacyl-[acyl-carrier protein] reductase, inferred for ABFAE pathway K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_2881 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_3459 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_0106 Oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_0364 Short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CFU_1342 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CFU_1463 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CFU_2435 Arylesterase precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D CFU_3986 Acyl-CoA hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D CFU_1082 jamB2; Delta-9 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D CFU_1083 jamB3; Delta-9 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D CFU_0026 Delta-9 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D CFU_1231 Delta-9 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D CFU_1080 desA; fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D CFU_3350 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CFU_3071 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CFU_3530 prpE; Propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D CFU_2562 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFU_3992 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFU_3993 lcfA; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFU_1209 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFU_4262 Long-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D CFU_2884 plsX; Phosphate:acyl-ACP acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CFU_3561 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CFU_3619 nlaB; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CFU_0804 plsC; phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:cfu01008]
D CFU_2303 Hypothetical MbtH-like protein K05375 mbtH; MbtH protein
D CFU_1389 entD; 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
C 01006 Prenyltransferases [BR:cfu01006]
D CFU_0733 ispA; Geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D CFU_3920 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CFU_1335 uppS; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CFU_2447 Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D CFU_3572 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CFU_0759 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D CFU_0564 cyoE; Heme O synthase, protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:cfu01007]
D CFU_3475 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CFU_1154 glnS; Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CFU_1037 glutamyl-Q-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D CFU_3960 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CFU_1676 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CFU_3819 trpS2; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CFU_2340 cys2; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CFU_0088 cys; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CFU_4276 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CFU_3479 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CFU_3260 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CFU_0714 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CFU_3858 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CFU_3121 lysS; Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CFU_0653 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CFU_1916 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CFU_3616 glyQ; Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CFU_3617 glyS; Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CFU_2681 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CFU_3893 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CFU_1500 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CFU_1158 ala; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CFU_1505 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CFU_1507 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CFU_2458 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CFU_0125 Aminotransferase, class I and II K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D CFU_3136 tyrB; Aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D CFU_1583 aminotransferase, class I and II K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D CFU_1290 dapC; N-succinyl-L,L-diaminopimelate aminotransferase alternative K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D CFU_4237 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CFU_3753 Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CFU_2551 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D CFU_4255 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CFU_3439 Omega-amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D CFU_0091 aptA; Omega-amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D CFU_4137 rocD; Ornithine aminotransferase (Ornithine--oxo-acid aminotransferase) K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D CFU_3554 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CFU_4383 gabT; Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D CFU_2187 Pyridoxal phosphate-dependent aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D CFU_4254 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CFU_0790 hemL; Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CFU_4197 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D CFU_3789 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CFU_1180 pabB; Aminodeoxychorismate lyase K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D CFU_0632 phnW; 2-aminoethylphosphonate:pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D CFU_0046 sgaA; Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D CFU_3755 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CFU_3306 yfbE; putative aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:cfu00194]
D CFU_4132 Ferredoxin K02639 petF; ferredoxin
D CFU_4187 atpC2; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CFU_4391 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CFU_4392 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CFU_4393 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CFU_4394 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CFU_4395 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CFU_4396 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CFU_4397 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CFU_4398 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CFU_4399 ATP synthase protein I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cfu03000]
D CFU_3378 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CFU_0488 pobR; putative transcriptional regulator, AraC/XylS family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CFU_3184 transcriptional regulator, AraC family K13652 K13652; AraC family transcriptional regulator
D CFU_3241 Adenosine deaminase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D CFU_3245 ada; ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D CFU_4364 transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D CFU_3087 Transcriptional regulator, AraC family K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D CFU_3107 transcriptional regulator, AraC family K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D CFU_1636 gcvA; Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CFU_1963 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CFU_4195 Glycine cleavage system transcriptional activator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CFU_3516 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CFU_0588 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CFU_0116 putative LysR-family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CFU_0738 putative transcription regulator protein, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CFU_3808 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CFU_1542 metR; transcriptional regulator of methionine biosynthesis (LysR family) K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D CFU_3073 nhaR; transcriptional activator protein NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D CFU_0760 oxyR; Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D CFU_3505 Regulatory protein CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D CFU_3010 cbl; Alkanesulfonate utilization operon LysR-family regulator CbI K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D CFU_3331 transcriptional regulator, LysR family K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator
D CFU_1377 ampR; transcriptional regulator, LysR family K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D CFU_3221 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D CFU_0366 ceoR; transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D CFU_1529 transcriptional regulator, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D CFU_4357 Transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D CFU_3984 transcriptional regulator, LysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D CFU_2008 cmpR; transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D CFU_2197 deoR; Deoxyribose operon repressor, DeoR family K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D CFU_0748 glpR; Glycerol-3-phosphate regulon repressor, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D CFU_4099 rbsR; Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CFU_0342 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CFU_2950 LacI-family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CFU_2581 DNA-binding protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CFU_3156 xylR; Xylose activator XylR (AraC family) K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CFU_0696 transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D CFU_1932 Transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D CFU_0294 purR; transcriptional regulator, LacI family K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D CFU_0747 lacI; putative transcription regulator transcription regulator protein K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D CFU_4421 gntR; Gluconate utilization system Gnt-I transcriptional repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D CFU_2391 hutC; Transcriptional regulator, GntR family K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D CFU_2984 nagQ; putative transcriptional regulator of N-Acetylglucosamine utilization, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D CFU_4328 putative GntR-family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D CFU_1745 Transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D CFU_4284 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D CFU_2662 Putative alkanesulfonate metabolism utilization regulator K03710 K03710; GntR family transcriptional regulator
D CFU_0235 putative D-glucarate or D-galactorate regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CFU_3491 Transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CFU_4384 Putative GntR-family regulatory protein and aminotransferase near polyamine transporter K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CFU_3685 Transcriptional regulator, GntR family/aminotransferase class-I K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CFU_0915 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CFU_2171 Transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CFU_1148 betI; HTH-type transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D CFU_0835 ttgR; transcriptional repressor for multidrug efflux pump (TetR/AcrR family) K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D CFU_4074 ttk; putative transcription regulator protein K05501 slmA; TetR/AcrR family transcriptional regulator
D CFU_2244 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D CFU_0099 Transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D CFU_0095 transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CFU_1514 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CFU_2594 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CFU_2093 Transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CFU_3691 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D CFU_2165 putative transcriptional regulatory protein, TetR/AcrR family K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon
D CFU_3133 conserved hypothetical protein; putative Transcriptional regulator K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon
D CFU_0903 putative transcriptional regulator (AsnC familiy) K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CFU_2862 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CFU_4020 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CFU_4225 regulatory protein, AsnC/Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CFU_4419 putative transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CFU_0371 High-affinity branched-chain amino acid transport system K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CFU_4136 Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CFU_1554 regulatory protein, AsnC/Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CFU_3320 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CFU_1689 transcriptional regulator, AsnC-family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D CFU_0921 ohrR; Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CFU_2963 cueR; MerR transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D CFU_1066 putative transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D CFU_2228 putative transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D CFU_1489 soxR; Redox-sensitive transcriptional activator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D CFU_4039 Zinc uptake regulation protein ZUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CFU_3854 fur; Ferric uptake regulation protein FUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CFU_2080 pcaR; Pca regulon regulatory protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D CFU_2082 regulatory protein, IclR K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D CFU_0157 Transcriptional regulator, IclR family K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D CFU_2563 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CFU_2015 cAMP-binding protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D CFU_3131 iscR; Iron-sulfur cluster regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D CFU_3198 arsR; Arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CFU_2552 transcriptional regulator, XRE family K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D CFU_1451 putative transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D CFU_4205 bpl; Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CFU_3954 fis; macromolecule metabolism; basic proteins K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D CFU_3535 prpR; Propionate catabolism operon regulatory protein PrpR K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D CFU_1640 acoR; Sigma54 specific transcriptional regulator with GAF sensor, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CFU_2685 rocR; Arginine utilization regulatory protein r K06714 rocR; arginine utilization regulatory protein
D CFU_1565 putative transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D CFU_3238 Helix-turn-helix motif protein K07726 K07726; putative transcriptional regulator
D CFU_3339 yozG; Transcriptional regulator, Cro/CI family K07727 K07727; putative transcriptional regulator
D CFU_4418 putA; multifunctional: transcriptional repressor of proline utilization; proline dehydrogenase; pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CFU_4441 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CFU_2402 BolA protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D CFU_4401 parB; Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CFU_3852 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D CFU_0801 pyrR; Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CFU_3684 Transcriptional regulator K07734 paiB; transcriptional regulator
D CFU_0799 yqgE; UPF0301 protein yqgE K07735 algH; putative transcriptional regulator
D CFU_4041 dksA; C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D CFU_3399 nrdR; Ribonucleotide reductase transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D CFU_3951 mraZ; Cell division protein mraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cfu03021]
D CFU_2111 DinG family ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D CFU_0427 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CFU_0393 rpoB; DNA-directed RNA polymerase subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CFU_0394 rpoC; DNA-directed RNA polymerase subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CFU_2315 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CFU_1025 rpoD; RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D CFU_1909 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D CFU_2878 rpoE1; RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CFU_2575 RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CFU_1260 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CFU_0658 Sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CFU_2708 hurI; RNA polymerase, sigma-24 subunit, ECF subfamily K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D CFU_0568 rpoH; RNA polymerase sigma factor K03089 rpoH; RNA polymerase sigma-32 factor
D CFU_0462 rpoN; sigma N (sigma 54) factor of RNA polymerase K03092 rpoN; RNA polymerase sigma-54 factor
D CFU_0934 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D CFU_3444 nusA; Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D CFU_3433 nusB; Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D CFU_0388 nusG; Transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D CFU_0663 sspA; Stringent starvation protein A K03599 sspA; stringent starvation protein A
D CFU_0664 sspB; Stringent starvation protein B K03600 sspB; stringent starvation protein B
D CFU_2877 rseA; Sigma factor RpoE negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D CFU_2876 rseB; Sigma factor RpoE negative regulatory protein K03598 rseB; sigma-E factor negative regulatory protein RseB
D CFU_4041 dksA; C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D CFU_2501 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CFU_1581 greB; Transcription elongation factor K04760 greB; transcription elongation factor GreB
D CFU_0873 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cfu03019]
D CFU_2894 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D CFU_1046 rnG; Cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D CFU_2870 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CFU_2347 vacB; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CFU_1226 putative Guanyl-specific ribonuclease St (RNase St) K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D CFU_3228 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CFU_2491 rhlE2; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CFU_0196 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CFU_1036 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CFU_0844 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CFU_1252 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CFU_3063 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CFU_0873 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CFU_3847 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CFU_3721 mopA; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CFU_1920 hfq; RNA-binding protein K03666 hfq; host factor-I protein
D CFU_2515 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CFU_1279 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CFU_3839 pcnB; Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D CFU_3894 nudH; Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D CFU_2305 menG; Ribonuclease E inhibitor RraA K02553 rraA; regulator of ribonuclease activity A
D CFU_0619 Hypothetical ATP-binding protein UPF0042, contains P-loop K06958 rapZ; RNase adapter protein RapZ
D CFU_1423 hrpA; helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:cfu03011]
D CFU_3748 rpsA; SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D CFU_1331 rpsB; SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D CFU_0407 rpsC; SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D CFU_0426 rpsD; SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D CFU_0418 rpsE; SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D CFU_2486 rpsF; SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D CFU_0397 rpsG; SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D CFU_0415 rpsH; SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D CFU_3967 rpsI; SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D CFU_0400 rpsJ; SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D CFU_0425 rpsK; SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D CFU_0396 rpsL; SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D CFU_0424 rpsM; SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D CFU_0414 SSU ribosomal protein S14p (S29e) K02954 RP-S14; small subunit ribosomal protein S14
D CFU_3064 rpsO; SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D CFU_1167 rpsP; 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CFU_0410 rpsQ; SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D CFU_2484 rpsR; SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D CFU_0405 rpsS; SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D CFU_3272 rpsT; SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D CFU_1028 rpsU; SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D CFU_0390 rplA; LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D CFU_0404 rplB; LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D CFU_0401 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CFU_0402 rplD; LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D CFU_0413 rplE; LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D CFU_0416 rplF; LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D CFU_2483 rplI; LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D CFU_0391 rplJ; LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D CFU_0389 rplK; LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D CFU_0392 rplL; LSU ribosomal protein L7/L12 (L23e) K02935 RP-L7; large subunit ribosomal protein L7/L12
D CFU_3968 rplM; LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D CFU_0411 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D CFU_0420 rplO; LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D CFU_0408 rplP; LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D CFU_0428 rplQ; LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D CFU_0417 rplR; LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D CFU_1170 rplS; LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D CFU_1503 rplT; LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D CFU_3899 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D CFU_0406 rplV; LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D CFU_0403 rplW; LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D CFU_0412 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D CFU_3898 rpmA; LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D CFU_1233 rpmB; LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D CFU_0409 rpmC; LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D CFU_0419 rpmD; LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D CFU_0870 rpmE; LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D CFU_2885 LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D CFU_1232 rpmG; LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D CFU_4450 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D CFU_1502 50S ribosomal subunit protein A K02916 RP-L35; large subunit ribosomal protein L35
D CFU_0423 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CFU_0610 rplY; LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D CFU_5011 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D CFU_5047 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D CFU_5054 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D CFU_5007 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CFU_5051 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CFU_5058 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CFU_5010 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CFU_5048 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CFU_5055 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cfu03009]
D CFU_2870 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CFU_3228 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CFU_2869 era; GTP-binding protein K03595 era; GTPase
D CFU_3897 GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D CFU_4041 dksA; C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D CFU_3444 nusA; Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D CFU_3433 nusB; Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D CFU_0388 nusG; Transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D CFU_4201 rsuA2; Ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D CFU_3623 ksgA; Dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CFU_0573 sun; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CFU_1229 putative NOL1/NOP2/sun family protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CFU_0584 putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CFU_3257 Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CFU_4404 gidB; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CFU_3950 mraW; S-adenosyl-methyltransferase mraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CFU_4171 Tetrapyrrole (Corrin-Porphyrin) methylase family protein UPF0011 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CFU_2888 Tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CFU_2346 putative tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CFU_2498 rrmJ; Ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D CFU_1048 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D CFU_1569 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D CFU_3864 Methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D CFU_1913 Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CFU_1910 rumA; 23S rRNA (uracil-5-)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CFU_3528 ribosomal large subunit pseudouridine synthase A-like protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CFU_3446 rsuB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CFU_2892 rluC; Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D CFU_1772 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CFU_3269 putative Pseudouridylate synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D CFU_2265 rsuA; tRNA pseudouridine synthase A K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D CFU_1328 putative pseudouridylate synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D CFU_2429 rimI; Ribosomal-protein-S18p-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CFU_1168 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D CFU_1778 yliG; hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D CFU_1416 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D CFU_0776 prmA; Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CFU_1284 hypothetical protein K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D CFU_2177 yxbC; hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D CFU_1681 hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D CFU_2894 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D CFU_1046 rnG; Cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D CFU_0800 yqgF; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CFU_1958 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D CFU_3230 engC; Ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CFU_1919 engA; GTP-binding protein K03977 engA; GTPase
D CFU_3730 ylqF; 50S ribosomal subunit maturation GTPase K14540 rbgA; ribosome biogenesis GTPase A
D CFU_1921 hflX; GTP-binding protein K03665 hflX; GTPase
D CFU_3782 Sua5 YciO YrdC YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CFU_2316 spoT; Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CFU_3442 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CFU_3445 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D CFU_1132 hypothetical protein K14761 rlbA; ribosome-associated protein
D CFU_1049 hypothetical protein K09710 ybeB; ribosome-associated protein
D CFU_3610 putative metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor
D CFU_2499 RNA binding protein K07574 yhbY; RNA-binding protein
D CFU_2956 Putative alpha helix protein K09889 yjgA; ribosome-associated protein
D CFU_0461 Ribosome hibernation protein YhbH K05808 hpf; ribosome hibernation promoting factor
D CFU_0607 ychF; GTP-binding and nucleic acid-binding protein K06942 ychF; ribosome-binding ATPase
D CFU_2886 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cfu03016]
D CFU_1226 putative Guanyl-specific ribonuclease St (RNase St) K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D CFU_4022 cca; tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D CFU_3475 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CFU_3893 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CFU_3260 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CFU_3858 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CFU_3479 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CFU_1154 glnS; Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CFU_4276 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CFU_3121 lysS; Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CFU_0653 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CFU_1158 ala; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CFU_1500 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CFU_2681 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CFU_2340 cys2; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CFU_0088 cys; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CFU_0714 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CFU_1916 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CFU_1505 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CFU_1507 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CFU_3960 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CFU_1676 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CFU_3819 trpS2; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CFU_3959 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CFU_0523 hitA; putative Histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CFU_3694 trmB; tRNA (m7G46) methyltransferase, SAM-dependent K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CFU_4169 Putative S-adenosylmethionine-dependent methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CFU_1871 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CFU_3441 truB; tRNA pseudouridine 5S synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CFU_3130 iscS2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CFU_2173 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CFU_3782 Sua5 YciO YrdC YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CFU_3572 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CFU_4447 trmE; GTPase and tRNA-U34 5-formylation enzyme TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CFU_4405 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CFU_1696 selD; Selenide,water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CFU_2452 rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D CFU_0785 Exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D CFU_1371 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D CFU_4232 yjjK; ATPase components of ABC transporters with duplicated ATPase domains K06020 ettA; energy-dependent translational throttle protein EttA
D CFU_3616 glyQ; Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CFU_3617 glyS; Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CFU_1037 glutamyl-Q-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D CFU_1375 cumB; tRNA-specific adenosine-34 deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CFU_3436 yjbN; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D CFU_3955 tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D CFU_3608 miaB; tRNA-i(6)A37 methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CFU_1471 hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D CFU_2488 lasT; tRNA:Cm32/Um32 methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D CFU_1169 trmD; tRNA (Guanine37-N1) -methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CFU_4008 tRNA (cytosine-O-)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CFU_1346 rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family
D CFU_3528 ribosomal large subunit pseudouridine synthase A-like protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CFU_3637 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CFU_0377 ydaO; tRNA(Cytosine32)-2-thiocytidine synthetase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D CFU_1162 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D CFU_3128 iscA; Iron binding protein IscA for iron-sulfur cluster assembly K13628 iscA; iron-sulfur cluster assembly protein
D CFU_1817 putative aminomethyltransferase K06980 ygfZ; tRNA-modifying protein YgfZ
D CFU_4077 hypothetical protein K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D CFU_0762 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CFU_4016 queC; Queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CFU_1374 queD; Queuosine biosynthesis K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CFU_1373 queE; Queuosine Biosynthesis K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CFU_0623 queF; NADPH dependent preQ0 reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CFU_3567 Iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CFU_0177 protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D CFU_1695 ybbB; Selenophosphate-dependent tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D CFU_0764 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CFU_2337 mesJ; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CFU_2430 yeaZ; metal-dependent protease-like protein, putative molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CFU_1035 gcp; Endopeptidase essential in most Bacteria K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CFU_3568 yjeE; ATPase with putative role in cell wall biosynthesis K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CFU_3776 moeB; putative Molybdenum cofactor biosynthesis protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D CFU_2347 vacB; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CFU_3063 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cfu03012]
D CFU_3443 infB; Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D CFU_1501 infC; Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D CFU_1283 yheS; putative transport protein (ABC superfamily, atp_bind) K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CFU_1332 tsf; Translation elongation factor Ts K02357 tsf; elongation factor Ts
D CFU_0386 tufB; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D CFU_2257 fusA2; translation elongation factor G K02355 fusA; elongation factor G
D CFU_0398 fusA; Translation elongation factor G K02355 fusA; elongation factor G
D CFU_0816 selB; Selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D CFU_3914 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CFU_1334 frr; Ribosome recycling factor K02838 frr; ribosome recycling factor
D CFU_3916 hypothetical protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CFU_0609 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CFU_0422 infA; protein chain initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CFU_2767 efp; Translation elongation factor P K02356 efp; elongation factor P
D CFU_3120 prfB; peptide chain release factor RF-2 K02836 prfB; peptide chain release factor 2
D CFU_1422 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D CFU_2352 hypothetical protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:cfu03110]
D CFU_3265 clpA; ATP-dependent Clp protease ATP-binding subunit clpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D CFU_2307 clpB2; ClpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CFU_2440 clpX; ATP-dependent Clp protease ATP-binding subunit clpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CFU_4046 hslU; ATP-dependent hsl protease ATP-binding subunit hslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D CFU_2544 htpG; Chaperone protein K04079 HSP90A; molecular chaperone HtpG
D CFU_3847 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CFU_3124 chaperone (Hsp70 family) K04044 hscA; molecular chaperone HscA
D CFU_4220 yegD; Putative heat shock protein YegD K04046 yegD; hypothetical chaperone protein
D CFU_3721 mopA; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CFU_3846 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CFU_2360 cbpA; DnaJ-class molecular chaperone CbpA K05516 cbpA; curved DNA-binding protein
D CFU_3127 hscB; Chaperone protein HscB K04082 hscB; molecular chaperone HscB
D CFU_1254 hslO; putative redox-regulated molecular chaperone heat-shock-like protein K04083 hslO; molecular chaperone Hsp33
D CFU_3848 grpE; Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D CFU_0531 hslR; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit K04762 hslR; ribosome-associated heat shock protein Hsp15
D CFU_3720 groS; Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D CFU_2875 mucD; Serine protease precursor MucD/AlgY associated with sigma factor RpoE K04771 degP; serine protease Do [EC:3.4.21.107]
D CFU_3314 putative periplasmic serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CFU_2497 ftsH; Cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CFU_4398 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CFU_2415 papD; putative pilus assembly protein chaperone K07346 fimC; fimbrial chaperone protein
D CFU_1577 Fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein
D CFU_4061 secB; Protein export cytoplasm chaperone protein K03071 secB; preprotein translocase subunit SecB
D CFU_4009 Copper metallochaperone, bacterial analog of Cox17 protein K09796 pccA; periplasmic copper chaperone A
D CFU_2341 ppiB; peptidyl-prolyl cis-trans isomerase B (rotamase B)-like protein K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CFU_2342 ppiA; Peptidyl-prolyl cis-trans isomerase ppiA precursor K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CFU_2437 ppiD; Peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D CFU_3052 peptidyl-prolyl cis-trans isomerase (rotamase) K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D CFU_1235 fkpB; FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D CFU_1682 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D CFU_2403 Peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D CFU_3625 surA; Survival protein surA precursor (Peptidyl-prolyl cis-trans isomerase surA) K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D CFU_0874 trxA; thioredoxin K03671 TXN; thioredoxin
D CFU_2431 putative thioredoxin-like protein K03671 TXN; thioredoxin
D CFU_3069 putative thiol-disulfide isomerase and thioredoxin K03671 TXN; thioredoxin
D CFU_4062 grxC; Glutaredoxin 3 K03676 grxC; glutaredoxin 3
D CFU_3900 Glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D CFU_4274 dsbA; Periplasmic thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D CFU_3915 dsbB; Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D CFU_3905 dsbC; putative Thioredoxin-like or Protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D CFU_0430 dsbD; Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:cfu04131]
D CFU_1912 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CFU_2568 fbaB; Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CFU_3254 gap; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CFU_4064 gpmA; Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CFU_3787 pykA; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CFU_3464 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CFU_2544 htpG; Chaperone protein K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:cfu03051]
D CFU_2544 htpG; Chaperone protein K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:cfu03032]
D CFU_1467 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CFU_3378 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CFU_2438 DNA-binding protein HU-beta, NS1 (HU-1), plays a role in DNA replication and in rpo translation K03530 hupB; DNA-binding protein HU-beta
D CFU_0101 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CFU_1508 ihfA; Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D CFU_3747 ihfB; Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D CFU_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D CFU_2482 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CFU_1026 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CFU_0475 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CFU_1041 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CFU_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CFU_0905 holC; putative DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CFU_3860 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CFU_1820 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CFU_1468 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFU_2813 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CFU_1345 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CFU_0726 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CFU_1295 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CFU_1006 prophage PSPPH02, putative adenine modification methytransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CFU_3841 Chromosomal replication initiator protein dnaA K10763 hda; DnaA-homolog protein
D CFU_3756 topoisomerase type IIAa K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CFU_0003 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CFU_2537 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CFU_2535 Topoisomerase type IIAb K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CFU_2745 DNA topoisomerase IB (poxvirus type) K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CFU_4104 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cfu03036]
D CFU_3581 TPR repeat protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D CFU_3378 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CFU_2870 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CFU_2568 fbaB; Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CFU_2322 hypothetical protein K03746 hns; DNA-binding protein H-NS
D CFU_2438 DNA-binding protein HU-beta, NS1 (HU-1), plays a role in DNA replication and in rpo translation K03530 hupB; DNA-binding protein HU-beta
D CFU_0101 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CFU_1508 ihfA; Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D CFU_3747 ihfB; Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D CFU_2360 cbpA; DnaJ-class molecular chaperone CbpA K05516 cbpA; curved DNA-binding protein
D CFU_2359 hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM
D CFU_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D CFU_0720 dpsA; Iron-binding ferritin-like antioxidant protein K04047 dps; starvation-inducible DNA-binding protein
D CFU_3954 fis; macromolecule metabolism; basic proteins K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D CFU_1920 hfq; RNA-binding protein K03666 hfq; host factor-I protein
D CFU_0903 putative transcriptional regulator (AsnC familiy) K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CFU_2862 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CFU_4020 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CFU_4225 regulatory protein, AsnC/Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CFU_4419 putative transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CFU_0371 High-affinity branched-chain amino acid transport system K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CFU_4136 Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CFU_1554 regulatory protein, AsnC/Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CFU_3320 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CFU_1292 smc; Chromosome partition protein K03529 smc; chromosome segregation protein
D CFU_3483 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D CFU_3447 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D CFU_3938 ftsA; Cell division protein ftsA K03590 ftsA; cell division protein FtsA
D CFU_1253 ftsB; Septum formation initiator K05589 ftsB; cell division protein FtsB
D CFU_0581 ftsE; Cell division transporter, ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D CFU_3948 ftsI; Cell division protein ftsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CFU_2717 ftsK2; Cell division protein ftsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CFU_0987 ftsK; Cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CFU_3949 ftsL; Cell division protein ftsL K03586 ftsL; cell division protein FtsL
D CFU_3939 ftsQ; Cell division protein ftsQ K03589 ftsQ; cell division protein FtsQ
D CFU_3943 ftsW; Cell division protein ftsW K03588 ftsW; cell division protein FtsW
D CFU_0580 ftsX; Cell division protein ftsX K09811 ftsX; cell division transport system permease protein
D CFU_3936 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D CFU_0892 hypothetical protein K09888 zapA; cell division protein ZapA
D CFU_0891 hypothetical protein K09892 zapB; cell division protein ZapB
D CFU_3926 hypothetical protein K18778 zapD; cell division protein ZapD
D CFU_1757 ATPase K06916 zapE; cell division protein ZapE
D CFU_3569 amiC; N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CFU_0834 acrA; Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D CFU_3907 minC; Septum site-determining protein minC K03610 minC; septum site-determining protein MinC
D CFU_3908 minD; Septum site-determining protein minD K03609 minD; septum site-determining protein MinD
D CFU_3909 minE; Cell division topological specificity factor minE K03608 minE; cell division topological specificity factor
D CFU_4074 ttk; putative transcription regulator protein K05501 slmA; TetR/AcrR family transcriptional regulator
D CFU_4120 mreB; Rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CFU_4119 mreC; Rod shape-determining protein mreC K03570 mreC; rod shape-determining protein MreC
D CFU_4118 mreD; Rod shape-determining protein mreD K03571 mreD; rod shape-determining protein MreD
D CFU_4116 rodA; Rod shape-determining protein rodA K05837 rodA; rod shape determining protein RodA
D CFU_0244 hypothetical protein K03496 parA; chromosome partitioning protein
D CFU_4402 parA; Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D CFU_4401 parB; Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CFU_2537 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CFU_2535 Topoisomerase type IIAb K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CFU_4405 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CFU_4404 gidB; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CFU_4038 xerC; Tyrosine recombinase xerC K03733 xerC; integrase/recombinase XerC
D CFU_3564 xerD; site-specific tyrosine recombinase K04763 xerD; integrase/recombinase XerD
D CFU_3478 mrp; ATP-binding protein with nucleotide triphosphate hydrolase domain involved in sulfur metabolism K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CFU_0436 engB; putative GTPase with nucleoside triP hydrolase domain, involved in coordination of cell cycle K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:cfu03400]
D CFU_3565 Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CFU_0188 ogt; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CFU_0798 phrB; Deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D CFU_3134 conserved hypothetical protein; putative Uracil DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CFU_0617 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CFU_2519 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CFU_2111 DinG family ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D CFU_0176 S1/P1 nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D CFU_3928 mutT; putative CTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CFU_3263 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CFU_3241 Adenosine deaminase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D CFU_3245 ada; ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D CFU_3243 alkB; Alkylated DNA repair protein AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D CFU_2428 DNA polymerase, bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CFU_2339 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D CFU_3244 putative DNA-3-methyladenine glycosylase protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D CFU_4364 transcriptional regulator, AraC family K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D CFU_4198 tag; DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CFU_0615 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CFU_4127 xth; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CFU_3521 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CFU_3113 recJ; Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CFU_1295 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CFU_0726 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CFU_0472 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CFU_3135 uvrB; Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CFU_2864 uvrC; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D CFU_0722 uvrD; ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CFU_0393 rpoB; DNA-directed RNA polymerase subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CFU_0394 rpoC; DNA-directed RNA polymerase subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CFU_0427 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CFU_2315 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CFU_1790 mfd; Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CFU_1684 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CFU_3571 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CFU_1141 sbcB; Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D CFU_1216 xseA; Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CFU_0732 xseB; Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CFU_1041 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CFU_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CFU_0905 holC; putative DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CFU_3860 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CFU_1820 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CFU_1468 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CFU_2813 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CFU_0475 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CFU_1006 prophage PSPPH02, putative adenine modification methytransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CFU_3804 recA; RecA protein K03553 recA; recombination protein RecA
D CFU_0709 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CFU_0710 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CFU_3952 ruvC; Crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CFU_4371 priA; Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CFU_2485 priB; Primosomal replication protein N K02686 priB; primosomal replication protein N
D CFU_3045 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50
D CFU_2423 radA; DNA repair protein K04485 radA; DNA repair protein RadA/Sms
D CFU_0761 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CFU_2868 recO; DNA recombination and repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
D CFU_2811 recR; Recombination protein K06187 recR; recombination protein RecR
D CFU_3850 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CFU_4293 rdgC; DNA recombination-dependent growth factor C K03554 rdgC; recombination associated protein RdgC
D CFU_0876 putative exonuclease V K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D CFU_0875 hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D CFU_1054 conserved hypothetical protein with a nucleoside triphosphate hydrolase domain K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D CFU_1973 ligD; Ku domain protein K10979 ku; DNA end-binding protein Ku
D CFU_1974 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D CFU_3756 topoisomerase type IIAa K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CFU_0003 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CFU_2745 DNA topoisomerase IB (poxvirus type) K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CFU_2438 DNA-binding protein HU-beta, NS1 (HU-1), plays a role in DNA replication and in rpo translation K03530 hupB; DNA-binding protein HU-beta
D CFU_0101 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CFU_3954 fis; macromolecule metabolism; basic proteins K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D CFU_1508 ihfA; Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D CFU_3747 ihfB; Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D CFU_0844 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CFU_2322 hypothetical protein K03746 hns; DNA-binding protein H-NS
D CFU_2283 dinP; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CFU_2487 lexA; SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D CFU_0919 polB; DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D CFU_2618 RecA/RadA recombinase K14160 imuA; protein ImuA
D CFU_2619 conserved hypothetical protein K14161 imuB; protein ImuB
D CFU_2620 DNA polymerase III alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D CFU_3803 recX; Regulatory protein recX K03565 recX; regulatory protein
D CFU_4291 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D CFU_1761 dinG; DinG family ATP-dependent helicase YoaA K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D CFU_1372 lhr; ATP-dependent helicase, DEAD/DEAH family K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D CFU_3878 nrdA; Ribonucleotide reductase of class Ia (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CFU_3877 nrdB; Ribonucleotide reductase of class Ia (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:cfu03029]
D CFU_0661 petB; Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CFU_3443 infB; Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D CFU_1501 infC; Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D CFU_1332 tsf; Translation elongation factor Ts K02357 tsf; elongation factor Ts
D CFU_0386 tufB; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D CFU_2257 fusA2; translation elongation factor G K02355 fusA; elongation factor G
D CFU_0398 fusA; Translation elongation factor G K02355 fusA; elongation factor G
D CFU_2869 era; GTP-binding protein K03595 era; GTPase
D CFU_3960 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CFU_3858 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CFU_0653 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CFU_4276 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CFU_4122 gatA; Aspartyl-tRNA(Asn) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CFU_2824 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CFU_4124 gatB; Aspartyl-tRNA(Asn) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CFU_4121 gatC; Aspartyl-tRNA(Asn) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CFU_3326 nuc1; DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D CFU_0475 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CFU_1339 outer membrane protein sensing stress K07277 SAM50; outer membrane protein insertion porin family
D CFU_3847 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CFU_3848 grpE; Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D CFU_3721 mopA; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CFU_3720 groS; Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D CFU_3846 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CFU_3130 iscS2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CFU_2173 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CFU_3127 hscB; Chaperone protein HscB K04082 hscB; molecular chaperone HscB
D CFU_3900 Glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D CFU_3478 mrp; ATP-binding protein with nucleotide triphosphate hydrolase domain involved in sulfur metabolism K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CFU_0564 cyoE; Heme O synthase, protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CFU_0557 ctaG; Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D CFU_0563 ctaA; Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D CFU_4448 OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CFU_2203 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion K14998 SURF1; surfeit locus 1 family protein
D CFU_0561 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion K14998 SURF1; surfeit locus 1 family protein
D CFU_0565 senC; Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone K07152 SCO1; protein SCO1
D CFU_2544 htpG; Chaperone protein K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cfu02000]
D CFU_1042 msbA; Lipid A export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CFU_1828 hlyB; putative ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D CFU_2674 cyaB; HlyB/MsbA family ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D CFU_3473 cvaB; toxin secretion ABC transporter, ATP-binding protein, putative K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D CFU_3985 ABC transporter ATP-binding cassette K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D CFU_1432 putative transport protein (ABC superfamily, ATP_bind) K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D CFU_1326 ABC transporter, transmembrane region K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CFU_1517 putative ABC transporter, transmembrane region K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CFU_1783 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CFU_3594 ABC transporter related protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D CFU_3095 macB; Macrolide export ATP-binding/permease protein macB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D CFU_2297 ABC-type siderophore export system, fused ATPase and permease components K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
D CFU_3276 abcZ; transport protein (ABC superfamily, atp_bind) K15738 uup; ABC transport system ATP-binding/permease protein
D CFU_3033 sbp; Sulfate-binding protein sbp K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D CFU_3013 cysT; Sulfate transport system permease protein cysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D CFU_3012 cysW; Sulfate transport system permease protein cysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D CFU_3011 cysA; Sulfate and thiosulfate import ATP-binding protein cysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D CFU_1564 modA; Molybdenum ABC transporter, periplasmic molybdenum-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CFU_2650 Hypothetical ABC transport system, periplasmic component K02020 modA; molybdate transport system substrate-binding protein
D CFU_2160 hypothetical protein K02020 modA; molybdate transport system substrate-binding protein
D CFU_3668 hypothetical protein K02020 modA; molybdate transport system substrate-binding protein
D CFU_1563 modB; Molybdenum transport system permease protein K02018 modB; molybdate transport system permease protein
D CFU_1562 modC; Molybdenum transport ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CFU_3975 nasF; Nitrate ABC transporter, nitrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D CFU_3974 nasE; Nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D CFU_3973 nasD; Nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D CFU_1950 tauA; Taurine-binding periplasmic protein K15551 tauA; taurine transport system substrate-binding protein
D CFU_1952 tauC; Taurine transport system permease protein K15552 tauC; taurine transport system permease protein
D CFU_1951 tauB; Taurine transport ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D CFU_2024 ssuA; aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CFU_3030 ssuA2; Alkanesulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CFU_3031 ssuA3; Alkanesulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CFU_2472 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components K15553 ssuA; sulfonate transport system substrate-binding protein
D CFU_2810 extracellular solute-binding protein, family 3 K15553 ssuA; sulfonate transport system substrate-binding protein
D CFU_2665 nitrate ABC transporter, periplasmic nitrate-binding protein, putative K15553 ssuA; sulfonate transport system substrate-binding protein
D CFU_3028 ssuC; Alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D CFU_2470 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein
D CFU_2666 Alkanesulfonates transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D CFU_2808 binding-protein-dependent transport systems inner membrane component K15554 ssuC; sulfonate transport system permease protein
D CFU_3027 ssuB2; Sulfonate ABC transporter, ATP-binding subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CFU_2809 ABC transporter related protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CFU_2667 ssuB; ABC-type putative sulfate transporter, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CFU_2471 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CFU_0635 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CFU_4437 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D CFU_0633 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D CFU_4436 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D CFU_0634 putative ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CFU_4435 potA3; Spermidine Putrescine transport ATP-binding protein potA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CFU_0650 potD; ABC transporter, periplasmic spermidine putrescine-binding protein potD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CFU_0649 potC; Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D CFU_0648 potB; spermidine/putrescine transport protein (ABC superfamily, membrane) K11071 potB; spermidine/putrescine transport system permease protein
D CFU_0647 potA; Spermidine Putrescine transport ATP-binding protein potA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CFU_3773 putative periplasmic solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CFU_4381 potD2; ABC transporter, periplasmic spermidine putrescine-binding protein potD K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CFU_4379 potC2; Spermidine Putrescine ABC transporter permease component potC K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CFU_3771 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CFU_3772 ABC-type transporter, permease component: MolT family K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CFU_4380 potB2; Spermidine Putrescine ABC transporter permease component potB K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CFU_3770 ABC transporter K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CFU_4382 potA2; Spermidine Putrescine transport ATP-binding protein potA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CFU_1408 L-proline glycine betaine binding ABC transporter protein proX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D CFU_3086 Substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein
D CFU_3097 proX; Glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D CFU_3088 proW; L-proline Glycine Betaine ABC transport system permease protein proW K02001 proW; glycine betaine/proline transport system permease protein
D CFU_3089 proV2; L-proline Glycine Betaine ABC transport ATP-binding protein proV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D CFU_1458 opcC; Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D CFU_2121 yehZ; Substrate-binding region of ABC-type glycine betaine transport system K05845 opuC; osmoprotectant transport system substrate-binding protein
D CFU_1457 ABC glycine betaine/choline/proline family transporter, inner membrane subunit K05846 opuBD; osmoprotectant transport system permease protein
D CFU_1459 ABC-type proline/glycine betaine transport systems, permease component K05846 opuBD; osmoprotectant transport system permease protein
D CFU_2118 yehW; ABC type choline/glycine/betaine transporter, permease subunit K05846 opuBD; osmoprotectant transport system permease protein
D CFU_2120 yehY; Putative ABC transport integral membrane subunit K05846 opuBD; osmoprotectant transport system permease protein
D CFU_1460 proV; L-proline Glycine Betaine ABC transport ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CFU_2119 yehX; putative ABC transporter K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CFU_3549 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CFU_3548 putative permease of ABC transporter K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CFU_3550 putative ABC-transport protein, ATP-binding component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CFU_0295 malK; Maltose/maltodextrin transport ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CFU_1098 Various polyols ABC transporter, ATP-binding component K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CFU_1440 maltose ABC transporter, ATP-binding protein, putative K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CFU_2608 N-Acetyl-D-glucosamine ABC transport system, ATP-binding component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CFU_2605 N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D CFU_2606 N-Acetyl-D-glucosamine ABC transport system, permease protein 1 K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D CFU_2607 N-Acetyl-D-glucosamine ABC transport system, permease protein 2 K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D CFU_1444 ABC-type sugar transport system, periplasmic component K17315 gtsA; glucose/mannose transport system substrate-binding protein
D CFU_2604 ABC-type sugar transport system, periplasmic component K17315 gtsA; glucose/mannose transport system substrate-binding protein
D CFU_1442 ABC transporter, membrane permease K17316 gtsB; glucose/mannose transport system permease protein
D CFU_1441 maltose ABC transporter, permease protein, putative K17317 gtsC; glucose/mannose transport system permease protein
D CFU_3154 xylF; Xylose ABC transporter, periplasmic xylose-binding protein xylF K10543 xylF; D-xylose transport system substrate-binding protein
D CFU_3152 xylH; Xylose ABC transporter, permease protein xylH K10544 xylH; D-xylose transport system permease protein
D CFU_3153 xylG; D-xylose transport ATP-binding protein xylG K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D CFU_1303 chvE; sugar ABC transporter, periplasmic sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D CFU_1305 gguB; L-arabinose transport system permease protein K10547 gguB; putative multiple sugar transport system permease protein
D CFU_1304 gguA; Sugar ABC transporter K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CFU_1929 rbsB; ABC sugar transporter, periplasmic ligand binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CFU_2951 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D CFU_2566 putative sugar ABC transporter, substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CFU_2104 putative fucose ABC transporter, substrate-binding component K10439 rbsB; ribose transport system substrate-binding protein
D CFU_4102 rbsB2; Ribose ABC transport system, periplasmic ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D CFU_1930 Ribose ABC transport system, permease protein K10440 rbsC; ribose transport system permease protein
D CFU_4100 rbsC2; Ribose ABC transport system, permease protein RbsC K10440 rbsC; ribose transport system permease protein
D CFU_2103 rbsC; putative fucose ABC transporter, permease component K10440 rbsC; ribose transport system permease protein
D CFU_4101 rbsA2; Ribose ABC transport system, ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CFU_2102 putative fucose ABC transporter, ATP-binding component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CFU_1931 rbsA; Ribose ABC transport system, ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CFU_2954 ABC transporter related protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CFU_2333 ytfQ; periplasmic binding protein/LacI transcriptional regulator K23508 ytfQ; galactofuranose transport system substrate-binding protein
D CFU_2330 yjfF; putative sugar uptake ABC transporter permease protein K23509 ytfT; galactofuranose transport system permease protein
D CFU_2331 ytfT; inner-membrane translocator K23509 ytfT; galactofuranose transport system permease protein
D CFU_2332 ytfR; putative ABC transporter K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D CFU_0335 ugpB; Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CFU_1205 ugpB2; Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CFU_0334 ugpA; SN-glycerol-3-phosphate transport system permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CFU_1204 ugpA2; SN-glycerol-3-phosphate transport system permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CFU_0333 ugpE; SN-glycerol-3-phosphate transport system permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CFU_1203 ugpE2; SN-glycerol-3-phosphate transport system permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CFU_1202 ugpC; SN-glycerol-3-phosphate transport ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D CFU_1102 smoE; ABC sugar transporter, periplasmic ligand binding protein K10227 smoE; polyol transport system substrate-binding protein
D CFU_1101 smoF; hypothetical protein K10228 smoF; polyol transport system permease protein
D CFU_1100 Various polyols ABC transporter, permease component 2 K10229 smoG; polyol transport system permease protein
D CFU_4129 lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D CFU_0224 ABC-type transporter, periplasmic component K07335 bmpA; basic membrane protein A and related proteins
D CFU_0222 putative transmembrane ABC transporter protein K23535 nupB; general nucleoside transport system permease protein
D CFU_0223 putative transmembrane ABC transporter protein K23536 nupC; general nucleoside transport system permease protein
D CFU_0221 putative ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein
D CFU_4208 putative signal peptide protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CFU_0506 Uncharacterized ABC transporter, periplasmic component YrbD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CFU_1966 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CFU_4206 ABC-type transport system involved in resistance to organic solvents, permease component K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CFU_0505 putative transport protein (ABC superfamily, membrane) K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CFU_1967 ABC-type transport system, permease component K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CFU_4207 putative ATP-binding component of ABC transporter precursor K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CFU_0504 ABC transport system ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CFU_4209 putative lipoprotein K18480 linN; cholesterol transport system auxiliary component
D CFU_0508 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 mlaC; phospholipid transport system substrate-binding protein
D CFU_0509 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D CFU_0297 yurO; extracellular solute-binding protein, family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CFU_0298 N-Acetyl-D-glucosamine ABC transport system, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D CFU_0299 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D CFU_2190 ABC sugar transporter, periplasmic ligand binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D CFU_1937 ABC sugar transporter, periplasmic ligand binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D CFU_1938 ABC sugar transporter, inner membrane subunit K02057 ABC.SS.P; simple sugar transport system permease protein
D CFU_2188 inner-membrane translocator K02057 ABC.SS.P; simple sugar transport system permease protein
D CFU_2191 ydeZ; Ribose ABC transport system, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D CFU_1939 putative ABC transporter K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CFU_2189 ABC-type sugar transport system, ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CFU_3110 Phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CFU_4361 pstS2; Phosphate ABC transporter, periplasmic phosphate-binding protein pstS K02040 pstS; phosphate transport system substrate-binding protein
D CFU_2513 pstS; Phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CFU_2512 pstC; Phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D CFU_2511 pstA; Phosphate transport system permease protein K02038 pstA; phosphate transport system permease protein
D CFU_2510 pstB; Phosphate transport ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CFU_4113 phnD; Phosphonate ABC transporter phosphate-binding periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein
D CFU_0185 phnD; Phosphonate ABC transporter phosphate-binding periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein
D CFU_4112 phnE; Phosphonate ABC transporter permease protein phnE K02042 phnE; phosphonate transport system permease protein
D CFU_4114 phnC; Phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D CFU_3981 Glutamate Aspartate periplasmic binding protein precursor gltI K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D CFU_3979 gltK; Glutamate Aspartate transport system permease protein gltK K10002 gltK; glutamate/aspartate transport system permease protein
D CFU_3980 gltJ; Glutamate Aspartate transport system permease protein gltJ K10003 gltJ; glutamate/aspartate transport system permease protein
D CFU_3978 gltL; Glutamate/aspartate transport ATP-binding protein gltL K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D CFU_1281 putative amino acid ABC transporter, periplasmic-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D CFU_1280 putative amino acid ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D CFU_0684 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_0899 putative amino acid ABC transporter K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_0900 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_1805 ABC branched chain amino acid family transporter, periplasmic ligand binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_4013 ABC-type transporter, periplasmic component: HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_4073 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_4409 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_2937 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_2558 ABC-type transporter, periplasmic component: HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_2773 putative ABC transport protein, substrate-binding component K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_3490 ABC-type transporter, periplasmic component: HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_0138 putative amino acid ABC transporter K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_0365 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_3545 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CFU_1806 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D CFU_4072 putative amino-acid transmembrane ABC transporter protein K01997 livH; branched-chain amino acid transport system permease protein
D CFU_4408 ABC branched chain amino acid family transporter, inner membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D CFU_2938 putative amino-acid transmembrane lipoprotein ABC transporter K01997 livH; branched-chain amino acid transport system permease protein
D CFU_2560 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein
D CFU_2397 livH; High-affinity branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CFU_1237 livH; High-affinity branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CFU_1807 putative ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CFU_4071 ABC-type branched-chain amino acid transport systems, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CFU_4407 ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein
D CFU_1238 livM; Branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CFU_2939 putative amino-acid transmembrane ABC transporter protein K01998 livM; branched-chain amino acid transport system permease protein
D CFU_2559 braE; inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D CFU_2396 putative amino acid transport system permease lipoprotein transmembrane K01998 livM; branched-chain amino acid transport system permease protein
D CFU_4411 putative ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CFU_2940 livG2; LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CFU_2561 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CFU_2395 putative ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CFU_1239 livG; high-affinity branched-chain amino acid transport protein (ABC superfamily, atp_bind) K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CFU_4070 livF2; Branched-chain amino acid transport ATP-binding protein livF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CFU_4410 putative ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CFU_1240 livF; Branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CFU_1808 putative ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CFU_2557 putative ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CFU_2941 putative amino-acid ATP-binding ABC transporter protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CFU_2394 putative amino-acid ATP-binding ABC transporter protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CFU_0698 metQ; Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CFU_1545 metQ2; Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CFU_3724 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CFU_0044 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D CFU_1546 yaeE; Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D CFU_3723 metI; Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D CFU_1547 abc; Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CFU_3722 metN; Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CFU_2930 Urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein
D CFU_2846 Urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein
D CFU_2847 urtB; Urea ABC transporter, permease protein K11960 urtB; urea transport system permease protein
D CFU_2929 urtB2; Urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D CFU_2928 urtC2; Urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D CFU_2848 urtC; Urea ABC transporter, permease protein K11961 urtC; urea transport system permease protein
D CFU_2927 urtD2; Urea ABC transporter, ATPase protein UrtD K11962 urtD; urea transport system ATP-binding protein
D CFU_2849 urtD; Urea ABC transporter, ATPase protein K11962 urtD; urea transport system ATP-binding protein
D CFU_2850 urtE; Urea ABC transporter, ATPase protein K11963 urtE; urea transport system ATP-binding protein
D CFU_2926 urtE2; Urea ABC transporter, ATPase protein UrtE K11963 urtE; urea transport system ATP-binding protein
D CFU_1556 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D CFU_1557 ABC transporter, permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D CFU_1558 ABC transporter, ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D CFU_1402 Twin-arginine translocation pathway signal K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CFU_2615 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CFU_1625 polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CFU_3547 putative substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CFU_4248 extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CFU_4389 histidine-binding periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CFU_0268 ABC transporter, substrate binding protein amino acid K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CFU_3766 extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CFU_2695 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CFU_0878 extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CFU_0879 extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CFU_0880 glutamine transport system substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CFU_2696 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D CFU_2616 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D CFU_2617 glnP; Glutamine transport system permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D CFU_1400 putative amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D CFU_1401 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K02029 ABC.PA.P; polar amino acid transport system permease protein
D CFU_0877 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine K02029 ABC.PA.P; polar amino acid transport system permease protein
D CFU_1399 ABC-type polar amino acid transport system, ATPase component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CFU_2697 ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CFU_2682 dppA; Dipeptide-binding ABC transporter, periplasmic substrate-binding component K12368 dppA; dipeptide transport system substrate-binding protein
D CFU_2692 dppA2; Dipeptide-binding ABC transporter, periplasmic substrate-binding component K12368 dppA; dipeptide transport system substrate-binding protein
D CFU_2690 dppB; Dipeptide transport system permease protein K12369 dppB; dipeptide transport system permease protein
D CFU_2689 dppC; Dipeptide transport system permease protein K12370 dppC; dipeptide transport system permease protein
D CFU_2688 dppD; Dipeptide transport ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D CFU_2686 dppF; Dipeptide transport ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D CFU_0595 yliB; extracellular solute-binding protein, family 5 K13889 gsiB; glutathione transport system substrate-binding protein
D CFU_0594 yliC; putative transmembrane ABC transporter protein K13890 gsiC; glutathione transport system permease protein
D CFU_0593 yliD; Dipeptide transport system permease protein dppC K13891 gsiD; glutathione transport system permease protein
D CFU_0596 yliA; Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal K13892 gsiA; glutathione transport system ATP-binding protein
D CFU_0319 ophA; ABC peptide/opine/nickel family transporter, periplasmic ligand binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CFU_1803 putative dipeptide transport binding transmembrane protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CFU_4002 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CFU_3178 hbpA3; heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CFU_4001 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CFU_3180 putative ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CFU_0320 ophB; binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CFU_3181 appC; putative ABC trasporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CFU_0321 ophC; ABC peptide transporter, inner membrane subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CFU_0322 ABC peptide/opine/nickel family transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CFU_3182 putative ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CFU_3998 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CFU_3997 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CFU_2298 periplasmic binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D CFU_2300 fhuB; Ferrichrome transport system permease protein fhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D CFU_2301 fecE; ABC cobalamin/Fe3+-siderophores transporter, ATPase subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D CFU_3485 btuF; Vitamin B12 ABC transporter, B12-binding component BtuF K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CFU_3487 hmuU; ABC-type Fe3+-siderophore transport system permease component K02015 ABC.FEV.P; iron complex transport system permease protein
D CFU_3486 ATP-binding ABC transporter protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CFU_1119 wzm; O-antigen export system permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D CFU_1120 wzt; ABC subunit of A-band LPS efflux transporter K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CFU_3519 Putative membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D CFU_3518 putative Membrane protein; putative permease K11720 lptG; lipopolysaccharide export system permease protein
D CFU_0463 putative transport protein (ABC superfamily, atp_bind) K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CFU_3068 transport protein of outer membrane lipoproteins (ABC superfamily, membrane) K09808 lolC_E; lipoprotein-releasing system permease protein
D CFU_3067 lolD; Lipoprotein releasing system ATP-binding protein lolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CFU_0580 ftsX; Cell division protein ftsX K09811 ftsX; cell division transport system permease protein
D CFU_0581 ftsE; Cell division transporter, ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D CFU_0511 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D CFU_2783 yadH; ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D CFU_2241 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D CFU_2946 gldA; ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CFU_0510 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CFU_2782 yadG; ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CFU_2242 ybhF; ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CFU_1850 ABC lipoprotein exporter, fused inner membrane subunits K02004 ABC.CD.P; putative ABC transport system permease protein
D CFU_2904 ABC transporter, permease protein, putative K02004 ABC.CD.P; putative ABC transport system permease protein
D CFU_1851 ycfV; Methionine ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CFU_2434 putative transport protein (ABC superfamily, atp_bind) K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CFU_1800 Putative sodium/bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CFU_2651 citA; General substrate transporter K03288 citA; MFS transporter, MHS family, citrate/tricarballylate:H+ symporter
D CFU_0872 General substrate transporter K03288 citA; MFS transporter, MHS family, citrate/tricarballylate:H+ symporter
D CFU_2254 pcaT; major facilitator superfamily (MFS) dicarboxlate/proton symporter K02625 pcaT; MFS transporter, MHS family, dicarboxylic acid transporter PcaT
D CFU_2090 Permeases of the major facilitator superfamily K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
D CFU_2010 putative oxalate/formate antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D CFU_2013 putative oxalate/formate antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D CFU_0236 gudP; D-galactarate permease K03535 gudP; MFS transporter, ACS family, glucarate transporter
D CFU_0744 exuT; Hexuronate transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D CFU_3991 dgoT; D-galactonate transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D CFU_3220 pcaK; 4-hydroxybenzoate transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D CFU_0486 pcaK; 4-hydroxybenzoate transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D CFU_0166 Nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D CFU_2425 putative transmembrane protein K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D CFU_4151 AmpG-like permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D CFU_2979 putative signal transducer K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D CFU_2249 Tetracycline-efflux transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D CFU_4229 tcaB; Drug resistance transporter Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D CFU_3240 ydhP; Major facilitator superfamily MFS_1 K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D CFU_4377 Arabinose efflux permease K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D CFU_1660 emrB; Inner membrane component of tripartite multidrug resistance system K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D CFU_2478 emrB2; Inner membrane component of tripartite multidrug resistance system K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D CFU_2287 major facilitator superfamily MFS_1 K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein
D CFU_0666 major facilitator superfamily (MFS) multidrug efflux pump, EmrB/QacA subfamily K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein
D CFU_1848 methylenomycin A resistance protein K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein
D CFU_1248 Major facilitator superfamily K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D CFU_0771 rosA; Permeases of the major facilitator superfamily K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D CFU_4154 ptsI; Phosphoenolpyruvate-protein phosphotransferase of PTS system K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CFU_4155 ptsH; Phosphocarrier protein, nitrogen regulation associated K02784 ptsH; phosphocarrier protein HPr
D CFU_4156 manX; putative Phosphotransferase, mannose/fructose-specific component IIA family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CFU_0621 ptsN; PTS system nitrogen-specific IIA component, PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D CFU_3917 aqpZ; Aquaporin Z K06188 aqpZ; aquaporin Z
D CFU_0752 glpF; Glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D CFU_1264 putative potassium channel K10716 kch; voltage-gated potassium channel
D CFU_4160 amtB; Ammonium transporter K03320 amt; ammonium transporter, Amt family
D CFU_1417 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_0769 putative Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_4193 Maleylacetoacetate isomerase/Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_2832 gstA1; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_0495 gstA; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_0141 gst9; Putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_0308 gst2; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_0016 gst; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_0147 gst3; Glutathione transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_2131 gst4; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_4023 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_2353 gst8; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_3830 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CFU_0663 sspA; Stringent starvation protein A K03599 sspA; stringent starvation protein A
D CFU_3075 yccA; Putative TEGT family carrier/transport protein K19416 yccA; modulator of FtsH protease
D CFU_1911 Integral membrane protein, interacts with FtsH K19416 yccA; modulator of FtsH protease
D CFU_0659 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D CFU_4236 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D CFU_3498 Potassium efflux system kefA / Small-conductance mechanosensitive channel K22044 ybiO; moderate conductance mechanosensitive channel
D CFU_2942 ureI; Urea channel UreI K22112 amiS; putative amide transporter protein
D CFU_0980 motA; Flagellar motor rotation protein K02556 motA; chemotaxis protein MotA
D CFU_0981 motB; Flagellar motor rotation protein K02557 motB; chemotaxis protein MotB
D CFU_4085 exbB3; MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D CFU_2988 exbB1; Biopolymer transport protein K03561 exbB; biopolymer transport protein ExbB
D CFU_3869 exbB2; MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D CFU_3174 exbB4; MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D CFU_0338 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D CFU_1218 Putative biopolymer transport exbB-like protein K03561 exbB; biopolymer transport protein ExbB
D CFU_4082 exbD6; Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D CFU_0339 exbD1; Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D CFU_1219 exdD; Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D CFU_2986 exbD7; Biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD
D CFU_2987 exbD2; Biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD
D CFU_3870 exbD5; Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D CFU_3172 exbD3; Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D CFU_3173 exbD4; Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D CFU_3404 tolQ; MotA/TolQ/ExbB proton channel family protein K03562 tolQ; biopolymer transport protein TolQ
D CFU_3405 tolR; Tol biopolymer transport system, TolR protein K03560 tolR; biopolymer transport protein TolR
D CFU_0789 corA; Magnesium and cobalt transport protein K03284 corA; magnesium transporter
D CFU_0432 Mg2+ transporter protein, CorA-like protein K03284 corA; magnesium transporter
D CFU_2630 putative Inorganic ion transport and metabolism K16074 zntB; zinc transporter
D CFU_3921 corB; putative transmembrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CFU_1414 corC1; Magnesium and cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CFU_2596 lamB; Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) K02024 lamB; maltoporin
D CFU_0060 Outer membrane protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CFU_3757 ompA; Outer membrane protein A precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CFU_3758 ompA2; Outer membrane protein A precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CFU_3599 Outer membrane protein A precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CFU_1578 bcfC; Outer membrane usher protein K07347 fimD; outer membrane usher protein
D CFU_2416 fimD; putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D CFU_3575 htrE; Putative fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D CFU_1690 estA; Phospholipase/lecithinase/hemolysin K12686 apeE; outer membrane lipase/esterase
D CFU_1278 yapH; outer membrane autotransporter barrel K19231 bmaC; fibronectin-binding autotransporter adhesin
D CFU_0192 Ferrichrome-iron receptor K16090 fiu; catecholate siderophore receptor
D CFU_1649 Ferrichrome-iron receptor K16090 fiu; catecholate siderophore receptor
D CFU_0434 fecA; Iron(III) dicitrate transport protein K16091 fecA; Fe(3+) dicitrate transport protein
D CFU_3488 btuB; Outer membrane vitamin B12 receptor BtuB K16092 btuB; vitamin B12 transporter
D CFU_2375 fhuE; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D CFU_2147 Ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CFU_0606 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CFU_1536 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CFU_1698 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CFU_4043 phuR; Zinc-regulated outer membrane receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CFU_4084 tonR3; TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CFU_4321 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CFU_2706 bfrH; TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CFU_3285 Ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CFU_3175 tonR2; TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CFU_3109 Ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CFU_0219 fyuA; TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CFU_0242 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CFU_0988 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CFU_2990 chiP-II; N-acetylglucosamine-regulated TonB-dependent outer membrane receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CFU_2293 orbA; Ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CFU_1572 bfrC; Ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CFU_2273 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CFU_0493 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CFU_3401 pdt; TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CFU_2524 czcC; Heavy metal RND efflux outer membrane protein, CzcC family K15725 czcC; outer membrane protein, heavy metal efflux system
D CFU_0836 tolC; Type I secretion outer membrane protein, precursor K12340 tolC; outer membrane protein
D CFU_1831 tolC2; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D CFU_3474 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D CFU_2669 outer membrane efflux protein K12340 tolC; outer membrane protein
D CFU_2592 Outer membrane component of tripartite multidrug resistance system K18903 oprC; outer membrane protein, multidrug efflux system
D CFU_0832 Outer membrane protein of RND family multidrug efflux pump K18139 oprM; outer membrane protein, multidrug efflux system
D CFU_3709 Outer membrane component of tripartite multidrug resistance system K18904 nodT; outer membrane protein, multidrug efflux system
D CFU_1989 wza; polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D CFU_2736 Capsule polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D CFU_1339 outer membrane protein sensing stress K07277 SAM50; outer membrane protein insertion porin family
D CFU_1918 putative serine/threonine protein kinase with quinoprotein alcohol dehydrogenase domain K17713 bamB; outer membrane protein assembly factor BamB
D CFU_1679 nlpB; putative lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D CFU_1771 comL; putative lipoprotein with tetratricopeptide repeats (TPR) domain K05807 bamD; outer membrane protein assembly factor BamD
D CFU_3855 hypothetical protein K06186 bamE; outer membrane protein assembly factor BamE
D CFU_1176 Outer membrane protein K07278 tamA; translocation and assembly module TamA
D CFU_1177 putative signal peptide protein K09800 tamB; translocation and assembly module TamB
D CFU_3729 hemagluttinin family protein K21449 ata; trimeric autotransporter adhesin
D CFU_2210 outer membrane protein, hemagluttinin-like protein K21449 ata; trimeric autotransporter adhesin
D CFU_0029 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D CFU_3725 hemagluttinin motif protein K21449 ata; trimeric autotransporter adhesin
D CFU_3728 hemagluttinin family protein K21449 ata; trimeric autotransporter adhesin
D CFU_3578 YadA-like protein K21449 ata; trimeric autotransporter adhesin
D CFU_3622 YadA-like protein K21449 ata; trimeric autotransporter adhesin
D CFU_0283 hemagluttinin motif protein K21449 ata; trimeric autotransporter adhesin
D CFU_2148 sapB; hypothetical protein K21449 ata; trimeric autotransporter adhesin
D CFU_2049 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D CFU_0464 putative transport protein (ABC superfamily, peri_bind) K09774 lptA; lipopolysaccharide export system protein LptA
D CFU_0465 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D CFU_3626 Outer membrane protein K04744 lptD; LPS-assembly protein
D CFU_3859 rlpB; putative lipoprotein B transmembrane protein K03643 lptE; LPS-assembly lipoprotein
D CFU_3614 corC2; Magnesium and cobalt efflux protein corC K06189 corC; hemolysin (HlyC) family protein
D CFU_1654 eat; Amino acid transporter K16238 eat; ethanolamine permease
D CFU_2376 czcD; Cobalt-zinc-cadmium resistance protein czcD K16264 czcD; cobalt-zinc-cadmium efflux system protein
D CFU_0728 putative Zinc transporter K16267 zipB; zinc and cadmium transporter
D CFU_1496 czcA; Cobalt-zinc-cadmium resistance protein K15726 czcA; heavy metal efflux system protein
D CFU_2522 czcA2; RND divalent metal cation efflux transporter K15726 czcA; heavy metal efflux system protein
D CFU_2591 AcrB/AcrD/AcrF family protein K18902 bpeF; multidrug efflux pump
D CFU_2444 acriflavin resistance protein K18303 mexK; multidrug efflux pump
D CFU_0833 Inner membrane efflux transporter of RND family multidrug efflux pump K18138 acrB; multidrug efflux pump
D CFU_1184 hypothetical protein K07788 mdtB; multidrug efflux pump
D CFU_1183 mdtC; Transmembrane drug efflux pump K07789 mdtC; multidrug efflux pump
D CFU_3222 emrE; Small multidrug resistance protein K03297 emrE; small multidrug resistance pump
D CFU_3211 sugE; Quaternary ammonium compound-resistance protein sugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D CFU_1181 hypothetical protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D CFU_2755 hypothetical protein K15268 eamA; O-acetylserine/cysteine efflux transporter
D CFU_2757 Permease of the drug/metabolite transporter (DMT) superfamily K15268 eamA; O-acetylserine/cysteine efflux transporter
D CFU_4231 rarD2; RarD protein, DMT superfamily transporter K05786 rarD; chloramphenicol-sensitive protein RarD
D CFU_2627 rarD; Chloramphenicol-sensitive protein K05786 rarD; chloramphenicol-sensitive protein RarD
D CFU_3212 putative membrane protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D CFU_1277 gntT; Gluconate transporter family protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D CFU_2920 betL; BCCT transporter K05020 opuD; glycine betaine transporter
D CFU_1147 betT; High-affinity choline uptake protein K02168 betT; choline/glycine/proline betaine transport protein
D CFU_2845 chaA; Calcium/proton antiporter K07300 chaA; Ca2+:H+ antiporter
D CFU_3213 putative Ca2+/Na+ antiporter K07301 yrbG; cation:H+ antiporter
D CFU_3824 Sodium:solute symporter family protein K14393 actP; cation/acetate symporter
D CFU_1421 Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate K11103 dctA; aerobic C4-dicarboxylate transport protein
D CFU_3020 sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D CFU_2632 gltS; Sodium/glutamate symport protein K03312 gltS; glutamate:Na+ symporter, ESS family
D CFU_2747 Sodium/hydrogen exchanger K24160 NHA1; sodium/hydrogen antiporter
D CFU_0383 kefC; Glutathione-regulated potassium-efflux system protein K11745 kefC; glutathione-regulated potassium-efflux system protein KefC
D CFU_0384 kefG; Glutathione-regulated potassium-efflux system ancillary protein K11746 kefF; glutathione-regulated potassium-efflux system ancillary protein KefF
D CFU_0468 kefB; Glutathione-regulated potassium-efflux system protein K03455 KEA1_2_3; K+:H+ antiporter
D CFU_1298 putative sodium/proton antiporter K26735 KEA4_5_6; K+:H+ antiporter
D CFU_3659 aviJ; sodium/hydrogen exchanger K26731 CHX; K+:H+ antiporter
D CFU_1145 ycdG; Uracil permease K09016 rutG; putative pyrimidine permease RutG
D CFU_3456 ygfU; Xanthine permease K24206 uacT; uric acid transporter
D CFU_4142 xprA; Xanthine/uracil/thiamine/ascorbate permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D CFU_4322 Xanthine/uracil/thiamine/ascorbate permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D CFU_3674 yjcD; Permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D CFU_1836 putative transmembrane protein K03281 clcA; chloride channel protein, CIC family
D CFU_1566 Putative chloride channel family protein K03281 clcA; chloride channel protein, CIC family
D CFU_3500 Cl-channel, voltage gated K03281 clcA; chloride channel protein, CIC family
D CFU_4221 eriC; Chloride channel protein K03281 clcA; chloride channel protein, CIC family
D CFU_1960 chrA; Chromate transport protein K07240 chrA; chromate transporter
D CFU_1961 chrA2; Chromate transport protein K07240 chrA; chromate transporter
D CFU_3767 chr; Chromate transporter K07240 chrA; chromate transporter
D CFU_2598 mntH2; Manganese transport protein K03322 mntH; manganese transport protein
D CFU_1707 TRAP dicarboxylate transporter, DctM subunit, unknown substrate 4 K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D CFU_3195 arsB; Arsenical-resistance protein K03325 ACR3; arsenite transporter
D CFU_3273 mviN; Virulence factor, mviN-like protein K03980 murJ; putative peptidoglycan lipid II flippase
D CFU_3566 hypothetical protein K13936 mdcF; malonate transporter and related proteins
D CFU_4170 kup; Kup system potassium uptake protein K03549 kup; KUP system potassium uptake protein
D CFU_1811 lysE; LysE family transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D CFU_3383 putative homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D CFU_4272 Lysine exporter protein (LYSE/YGGA) K05834 rhtB; homoserine/homoserine lactone efflux protein
D CFU_3151 transporter, LysE family K05834 rhtB; homoserine/homoserine lactone efflux protein
D CFU_3386 hypothetical protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D CFU_2328 rhtC; Threonine efflux protein K05835 rhtC; threonine efflux protein
D CFU_4403 Lysine exporter protein (LYSE/YGGA) K11250 leuE; leucine efflux protein
D CFU_3165 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D CFU_3164 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump
D CFU_4438 tctC; putative exported protein K07795 tctC; putative tricarboxylic transport membrane protein
D CFU_2520 ccc1; protein of unknown function DUF125, transmembrane K22736 VIT; vacuolar iron transporter family protein
D CFU_0545 putative multiple antibiotic resistance protein MarC K05595 marC; multiple antibiotic resistance protein
D CFU_3943 ftsW; Cell division protein ftsW K03588 ftsW; cell division protein FtsW
D CFU_1798 iron transporter, OFeT family K07243 FTR; high-affinity iron transporter
D CFU_1796 Periplasmic protein p19 involved in high-affinity Fe2+ transport K07230 p19; periplasmic iron binding protein
D CFU_0786 tonB2; TonB protein K03832 tonB; periplasmic protein TonB
D CFU_4296 hypothetical protein K03832 tonB; periplasmic protein TonB
D CFU_4083 tonB5; Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D CFU_2989 tonB3; periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D CFU_3868 tonB4; Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D CFU_0340 tonB1; Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D CFU_3408 pal; peptidoglycan-associated outer membrane lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D CFU_1758 hypothetical protein; putative signal peptide K03646 tolA; colicin import membrane protein
D CFU_3406 tolA; putative tolA-related transport transmembrane protein K03646 tolA; colicin import membrane protein
D CFU_3407 tolB; periplasmic protein involved in uptake K03641 tolB; TolB protein
D CFU_1224 rrpP; Pyrophosphate-energized proton pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D CFU_1708 mdcA; Malonate decarboxylase alpha subunit K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D CFU_1709 mdcD; Malonate decarboxylase delta subunit K13931 mdcC; malonate decarboxylase delta subunit
D CFU_1661 emrA; Membrane fusion component of tripartite multidrug resistance system K03543 emrA; membrane fusion protein, multidrug efflux system
D CFU_2477 emrA2; Membrane fusion component of tripartite multidrug resistance system K03543 emrA; membrane fusion protein, multidrug efflux system
D CFU_1495 czcB; putative Co/Zn/Cd efflux system membrane fusion protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D CFU_2523 czcB2; putative Co/Zn/Cd efflux system membrane fusion protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D CFU_2673 putative HlyD family secretion protein K11003 hlyD; membrane fusion protein, hemolysin D
D CFU_1830 hlyD; Type I secretion membrane fusion protein, HlyD K11003 hlyD; membrane fusion protein, hemolysin D
D CFU_3593 cyaD; type I secretion membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D CFU_3472 cvaA; putative secretion protein K13408 cvaA; membrane fusion protein
D CFU_2590 Cation/multidrug efflux system, mebrane-fusion component K18901 bpeE; membrane fusion protein, multidrug efflux system
D CFU_2445 putative transport/efflux transmembrane protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D CFU_0834 acrA; Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D CFU_2722 putative RND efflux membrane fusion protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D CFU_1246 hlyD3; secretion protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D CFU_1185 putative resistance transmembrane protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D CFU_1433 hypothetical protein K13888 macA; membrane fusion protein, macrolide-specific efflux system
D CFU_3094 macA; Macrolide-specific efflux protein MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system
D CFU_2734 yveL; Protein-tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D CFU_2735 gumC; lipopolysaccharide biosynthesis K25590 epsF; protein tyrosine kinase modulator
D CFU_1991 wzc; Tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D CFU_1574 pnuC; Ribosyl nicotinamide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D CFU_1106 feoA; conserved hypothetical protein, putative Ferrous iron transport protein K04758 feoA; ferrous iron transport protein A
D CFU_1105 feoB; Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CFU_0544 hypothetical protein K16348 ecnB; entericidin B
D CFU_2274 Membrane protein, MgtC/SapB family K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D CFU_3775 hypothetical protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D CFU_3448 transthyretin family protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D CFU_2626 outer membrane protein K07274 mipA; MipA family protein
D CFU_3348 MltA-interacting MipA family protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:cfu02044]
D CFU_1828 hlyB; putative ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D CFU_2674 cyaB; HlyB/MsbA family ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D CFU_2673 putative HlyD family secretion protein K11003 hlyD; membrane fusion protein, hemolysin D
D CFU_1830 hlyD; Type I secretion membrane fusion protein, HlyD K11003 hlyD; membrane fusion protein, hemolysin D
D CFU_0836 tolC; Type I secretion outer membrane protein, precursor K12340 tolC; outer membrane protein
D CFU_1831 tolC2; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D CFU_3474 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D CFU_2669 outer membrane efflux protein K12340 tolC; outer membrane protein
D CFU_3594 ABC transporter related protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D CFU_3593 cyaD; type I secretion membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D CFU_3472 cvaA; putative secretion protein K13408 cvaA; membrane fusion protein
D CFU_3473 cvaB; toxin secretion ABC transporter, ATP-binding protein, putative K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D CFU_4047 putative general secretion pathway transmembrane protein K02452 gspC; general secretion pathway protein C
D CFU_4050 gspD; General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D CFU_4049 gspE; General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D CFU_2565 putative secretion pathway ATPase K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D CFU_4048 gspF; General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D CFU_4058 gspG; General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D CFU_4057 gspH; General secretion pathway protein H K02457 gspH; general secretion pathway protein H
D CFU_4056 gspI; General secretion pathway protein I K02458 gspI; general secretion pathway protein I
D CFU_4055 gspJ; Type II secretory pathway component PulJ K02459 gspJ; general secretion pathway protein J
D CFU_4054 gspK; General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D CFU_4053 gspL; General secretion pathway protein L K02461 gspL; general secretion pathway protein L
D CFU_4052 gspM; General secretion pathway protein M K02462 gspM; general secretion pathway protein M
D CFU_4051 gspN; general secretion pathway protein N K02463 gspN; general secretion pathway protein N
D CFU_3924 pilD; Leader peptidase (Prepilin peptidase) K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CFU_3797 Fimbrial protein ecpC precursor (Pilin) K02650 pilA; type IV pilus assembly protein PilA
D CFU_4446 Type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
D CFU_3922 pilB; Type 4 fimbrial assembly, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D CFU_3923 pilC; Type 4 fimbrial assembly protein pilC K02653 pilC; type IV pilus assembly protein PilC
D CFU_2644 fimbrial biogenesis protein K02655 pilE; type IV pilus assembly protein PilE
D CFU_3602 type IV pilus biogenesis protein PilE K02655 pilE; type IV pilus assembly protein PilE
D CFU_1914 pilF; hypothetical protein K02656 pilF; type IV pilus assembly protein PilF
D CFU_0793 pilG; twitching motility protein K02657 pilG; twitching motility two-component system response regulator PilG
D CFU_0794 pilH; twitching motility protein K02658 pilH; twitching motility two-component system response regulator PilH
D CFU_0795 pilI; type IV pili signal transduction protein K02659 pilI; twitching motility protein PilI
D CFU_0796 pilJ; twitching motility protein K02660 pilJ; twitching motility protein PilJ
D CFU_0453 pilM; Type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
D CFU_0454 pilN; Type IV pilus biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D CFU_0455 pilO; Type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D CFU_0456 pilP; Type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
D CFU_0457 pilQ; Type IV pilus biogenesis protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D CFU_0755 pilT; Twitching motility protein K02669 pilT; twitching motility protein PilT
D CFU_0754 pilU; Twitching motility protein K02670 pilU; twitching motility protein PilU
D CFU_1288 twitching motility protein K02670 pilU; twitching motility protein PilU
D CFU_4442 pilV; type 4 fimbrial biogenesis protein PilV K02671 pilV; type IV pilus assembly protein PilV
D CFU_2643 type-4 fimbrial biogenesis transmembrane protein K02671 pilV; type IV pilus assembly protein PilV
D CFU_3606 type 4 fimbrial biogenesis protein PilV K02671 pilV; type IV pilus assembly protein PilV
D CFU_2642 fimbrial biogenesis protein K02672 pilW; type IV pilus assembly protein PilW
D CFU_3605 pilW; Prepilin-type cleavage/methylation-like protein K02672 pilW; type IV pilus assembly protein PilW
D CFU_3397 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D CFU_4443 type IV pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D CFU_3604 type IV pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D CFU_4444 type 4 fimbrial biogenesis protein PilY1 K02674 pilY1; type IV pilus assembly protein PilY1
D CFU_2641 type 4 fimbrial biogenesis protein K02674 pilY1; type IV pilus assembly protein PilY1
D CFU_3603 type 4 fimbrial biogenesis protein PilY1 K02674 pilY1; type IV pilus assembly protein PilY1
D CFU_1821 pilZ; Type IV pilus biogenesis protein K02676 pilZ; type IV pilus assembly protein PilZ
D CFU_3398 fimT; type 4 fimbrial biogenesis protein FimT K08084 fimT; type IV fimbrial biogenesis protein FimT
D CFU_1870 hypothetical protein K08086 fimV; pilus assembly protein FimV
D CFU_0853 putative membrane protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CFU_0854 cpaB; Flp pilus assembly protein K02279 cpaB; pilus assembly protein CpaB
D CFU_2222 flp pilus assembly protein secretin K02280 cpaC; pilus assembly protein CpaC
D CFU_0855 cpaC; Type II/IV secretion system secretin, associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
D CFU_0856 cpaE; Flp pilus assembly protein, ATPase K02282 cpaE; pilus assembly protein CpaE
D CFU_2220 tadA; flp pilus assembly ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CFU_0857 cpaF; type II secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CFU_2219 tadB; type II secretion system protein K12510 tadB; tight adherence protein B
D CFU_0858 hypothetical protein K12510 tadB; tight adherence protein B
D CFU_2218 tadC2; flp pilus assembly protein K12511 tadC; tight adherence protein C
D CFU_0859 tadC; Flp pilus assembly protein K12511 tadC; tight adherence protein C
D CFU_0860 Flp pilus assembly protein, contains TPR repeats K27079 tadD; tight adherence protein D
D CFU_0862 putative transmembrane protein K27080 tadG; tight adherence protein G
D CFU_0852 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D CFU_3873 hypothetical protein K02221 yggT; YggT family protein
D CFU_3742 hypothetical protein K02237 comEA; competence protein ComEA
D CFU_2817 rec2; DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D CFU_4331 hrcC; HrcC K03219 yscC; type III secretion protein C
D CFU_4349 sctD; HrpW transmembrane protein K03220 yscD; type III secretion protein D
D CFU_4339 sctJ; Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) K03222 yscJ; type III secretion protein J
D CFU_4337 sctL; Type III secretion inner membrane protein SctL K03223 yscL; type III secretion protein L
D CFU_4336 hrcN; HrcN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D CFU_4345 hrcQ; HrcQ K03225 yscQ; type III secretion protein Q
D CFU_4346 hrcR; Type III secretion inner membrane protein K03226 yscR; type III secretion protein R
D CFU_4347 hrcS; hrp-conserved HrcS transmembrane protein K03227 yscS; type III secretion protein S
D CFU_4334 hrcT; HrcT protein K03228 yscT; type III secretion protein T
D CFU_4342 hrcU; Type III secretion inner membrane protein K03229 yscU; type III secretion protein U
D CFU_4343 hrcV; Type III secretion inner membrane channel protein K03230 yscV; type III secretion protein V
D CFU_4341 HrpK protein K18373 hrpB1; type III secretion protein HrpB1
D CFU_4340 HrpB2 protein K18374 hrpB2; type III secretion inner rod protein HrpB2
D CFU_4348 hypothetical protein K18379 hpaA; type III secretion regulatory protein HpaA
D CFU_4344 hrp-associated protein HpaP K18381 hpaC; type III secretion control protein HpaP
D CFU_0931 flhA; Flagellar biosynthesis protein flhA K02400 flhA; flagellar biosynthesis protein FlhA
D CFU_0930 flhB; Flagellar biosynthesis protein flhB K02401 flhB; flagellar biosynthesis protein FlhB
D CFU_0972 fhlB; Flagellar biosynthesis protein K04061 flhB2; flagellar biosynthesis protein
D CFU_0964 fliF; Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D CFU_0962 fliH; Flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D CFU_0961 fliI; Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CFU_0956 fliM; Flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CFU_0955 fliN; Flagellar biosynthesis protein K02418 fliO; flagellar protein FliO/FliZ
D CFU_0954 fliP; Flagellar biosynthesis protein K02419 fliP; flagellar biosynthesis protein FliP
D CFU_0953 Flagellar biosynthesis protein K02420 fliQ; flagellar biosynthesis protein FliQ
D CFU_0952 fliR; Flagellar biosynthesis protein K02421 fliR; flagellar biosynthesis protein FliR
D CFU_3905 dsbC; putative Thioredoxin-like or Protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D CFU_1690 estA; Phospholipase/lecithinase/hemolysin K12686 apeE; outer membrane lipase/esterase
D CFU_0058 putative transmembrane protein K11891 impL; type VI secretion system protein ImpL
D CFU_0078 putative transmembrane protein K11892 impK; type VI secretion system protein ImpK
D CFU_0077 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D CFU_0069 impH; Protein of unknown function (DUF1305) superfamily K11895 impH; type VI secretion system protein ImpH
D CFU_0070 Protein ImpG/VasA K11896 impG; type VI secretion system protein ImpG
D CFU_0071 protein of unknown function DUF1316 K11897 impF; type VI secretion system protein ImpF
D CFU_0073 impC; hypothetical protein K11900 impC; type VI secretion system protein ImpC
D CFU_0074 impB; hypothetical protein K11901 impB; type VI secretion system protein ImpB
D CFU_0061 impA; hypothetical protein K11902 impA; type VI secretion system protein ImpA
D CFU_0688 Hypothetical Protein K11903 hcp; type VI secretion system secreted protein Hcp
D CFU_3217 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D CFU_0072 Putative cytoplasmic protein USSDB7A K11903 hcp; type VI secretion system secreted protein Hcp
D CFU_0079 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CFU_0063 vrgS; hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CFU_2806 putative Vgr-related protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CFU_0024 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CFU_1070 putative vgr related protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CFU_4280 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CFU_0538 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CFU_0076 putative transmembrane protein K11906 vasD; type VI secretion system protein VasD
D CFU_0068 clpB; ClpB protein K11907 vasG; type VI secretion system protein VasG
D CFU_0059 hypothetical protein K11890 impM; type VI secretion system protein ImpM
D CFU_3577 fimA; Fimbrial protein precursor K07345 fimA; major type 1 subunit fimbrin (pilin)
D CFU_2415 papD; putative pilus assembly protein chaperone K07346 fimC; fimbrial chaperone protein
D CFU_1577 Fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein
D CFU_1578 bcfC; Outer membrane usher protein K07347 fimD; outer membrane usher protein
D CFU_2416 fimD; putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D CFU_3575 htrE; Putative fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D CFU_1641 putative signal peptide protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D CFU_2414 Protein U precursor K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D CFU_2417 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D CFU_3931 secA; Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CFU_4061 secB; Protein export cytoplasm chaperone protein K03071 secB; preprotein translocase subunit SecB
D CFU_0766 secD; Protein-export membrane protein K03072 secD; preprotein translocase subunit SecD
D CFU_0387 secE; Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CFU_0767 secF; preprotein translocase, auxillary membrane component (General Secretory Pathway) K03074 secF; preprotein translocase subunit SecF
D CFU_1590 preprotein translocase IISP family, auxillary membrane component K03075 secG; preprotein translocase subunit SecG
D CFU_0421 secY; Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D CFU_3887 ffh; Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CFU_0582 ftsY; Signal recognition particle receptor protein FtsY (alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D CFU_0765 yajC; Preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D CFU_4448 OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CFU_0524 tatA; Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D CFU_0525 tatB; Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D CFU_0526 tatC; Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:cfu02042]
D CFU_2140 Zonula occludens toxin-like protein K10954 zot; zona occludens toxin
D CFU_3921 corB; putative transmembrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CFU_1414 corC1; Magnesium and cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CFU_0674 plcN; Phosphoesterase K01114 plc; phospholipase C [EC:3.1.4.3]
D CFU_3159 plcN2; Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CFU_0341 Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CFU_0030 non-hemolytic phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CFU_3310 putative thermolabile hemolysin K11018 tlh; thermolabile hemolysin
C 02022 Two-component system [BR:cfu02022]
D CFU_2493 phoR; Phosphate regulon sensor protein phoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CFU_2507 phoR2; Phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CFU_2494 phoB; Phosphate regulon transcriptional regulatory protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D CFU_2508 phoB2; Phosphate regulon transcriptional regulatory protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D CFU_1793 envZ; Osmolarity sensory histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D CFU_1794 ompR; Two-component system response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D CFU_4245 creC; Two-component response regulator CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D CFU_4244 creB; two component transcriptional regulator, winged helix family K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D CFU_2528 signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CFU_0184 sensor kinase protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CFU_1243 Heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CFU_2527 putative response regulator for cobalt zinc cadmium resistance transcription regulator protein K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CFU_0183 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CFU_1244 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CFU_1320 kdpD; Osmosensitive K+ channel histidine kinase kdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CFU_1321 kdpE; DNA-binding response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CFU_1535 ATP-binding region, ATPase-like:Histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D CFU_4440 tctE; integral membrane sensor signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D CFU_2474 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D CFU_1197 periplasmic sensor signal transduction histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D CFU_4439 tctD; DNA-binding response regulator TctD K07774 tctD; two-component system, OmpR family, response regulator TctD
D CFU_1198 two-component response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D CFU_2473 putative response regulator protein K07774 tctD; two-component system, OmpR family, response regulator TctD
D CFU_3312 qseC2; Sensory histidine kinase QseC K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CFU_0240 qseC; Sensory histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CFU_1193 Signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CFU_3092 ygiY; periplasmic sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CFU_3346 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CFU_1187 Two-component response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CFU_1194 putative response regulator transcription regulator protein K02483 K02483; two-component system, OmpR family, response regulator
D CFU_3091 qseB2; Two-component system response regulator QseB K02483 K02483; two-component system, OmpR family, response regulator
D CFU_3821 Response regulators consisting of a CheY-like receiver domain protein and a winged-helix DNA-binding domain protein K02483 K02483; two-component system, OmpR family, response regulator
D CFU_1534 Response regulators consisting of a CheY-like receiver domain protein and a winged-helix DNA-binding domain protein K02483 K02483; two-component system, OmpR family, response regulator
D CFU_2603 gltR; two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D CFU_3311 qseB3; Two-component system response regulator QseB K02483 K02483; two-component system, OmpR family, response regulator
D CFU_0241 qseB; Two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CFU_3347 ygiX; two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D CFU_4367 Two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D CFU_4368 rcsB; DNA-binding response regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D CFU_0973 Two Component Transcriptional Regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D CFU_3425 vsrD; Response regulator protein VsrD (LuxRfamily) K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D CFU_3587 bvgS; Hybrid sensory histidine kinase in two-component regulatory system with EvgA K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D CFU_3588 bvgA; DNA-binding response regulator, LuxR family K07690 evgA; two-component system, NarL family, response regulator EvgA
D CFU_4288 Sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D CFU_2934 algZ; Two-component system sensor ATPase precursor K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D CFU_2933 putative two component system response regulator (LyR/AlgR family) K08083 algR; two-component system, LytTR family, response regulator AlgR
D CFU_3537 ntrB; Nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D CFU_3536 ntrC; Nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D CFU_0571 atoS; putative two-component sensor kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D CFU_0570 putative two-component response regulator containing CheY-like receiver K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D CFU_3883 pilS; two-component sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D CFU_3880 pilR; type 4 fimbriae expression regulatory protein K02667 pilR; two-component system, NtrC family, response regulator PilR
D CFU_2253 dctB; Transporter K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D CFU_2251 dctD; Nitrogen regulation protein NR(I) K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D CFU_0983 cheA2; Chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CFU_0928 cheY; Chemotaxis regulator - transmits chemoreceptor signals to flagellar motor components K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CFU_0982 cheY2; Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CFU_0927 cheB; Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CFU_0797 cheA; Chemotaxis protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D CFU_0793 pilG; twitching motility protein K02657 pilG; twitching motility two-component system response regulator PilG
D CFU_0794 pilH; twitching motility protein K02658 pilH; twitching motility two-component system response regulator PilH
D CFU_2371 CheA signal transduction histidine kinase K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D CFU_2373 wspR; Two-component response regulator K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65]
D CFU_2372 cheB2; Chemotaxis response regulator protein-glutamate methylesterase 4 K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61]
D CFU_1984 divK; putative two component transcriptional regulator K11443 divK; two-component system, cell cycle response regulator DivK
D CFU_0154 signal transduction histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D CFU_2202 putative Two-component sensor K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D CFU_2201 putative Two-component response regulator K15012 regA; two-component system, response regulator RegA
D CFU_3976 nasT; Response regulator NasT K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
C 02035 Bacterial motility proteins [BR:cfu02035]
D CFU_0983 cheA2; Chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CFU_0974 cheW; Positive regulator of CheA protein activity K03408 cheW; purine-binding chemotaxis protein CheW
D CFU_0984 cheW2; Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D CFU_0926 cheD; Chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D CFU_0925 cheR; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CFU_0927 cheB; Chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CFU_0928 cheY; Chemotaxis regulator - transmits chemoreceptor signals to flagellar motor components K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CFU_0982 cheY2; Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CFU_0929 cheZ; Chemotaxis response - phosphatase K03414 cheZ; chemotaxis protein CheZ
D CFU_2659 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CFU_0923 tar; Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CFU_0975 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D CFU_2365 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CFU_2366 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CFU_0924 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CFU_0962 fliH; Flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D CFU_0961 fliI; Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CFU_0960 fliJ; Flagellar protein K02413 fliJ; flagellar protein FliJ
D CFU_0955 fliN; Flagellar biosynthesis protein K02418 fliO; flagellar protein FliO/FliZ
D CFU_0954 fliP; Flagellar biosynthesis protein K02419 fliP; flagellar biosynthesis protein FliP
D CFU_0953 Flagellar biosynthesis protein K02420 fliQ; flagellar biosynthesis protein FliQ
D CFU_0952 fliR; Flagellar biosynthesis protein K02421 fliR; flagellar biosynthesis protein FliR
D CFU_0931 flhA; Flagellar biosynthesis protein flhA K02400 flhA; flagellar biosynthesis protein FlhA
D CFU_0930 flhB; Flagellar biosynthesis protein flhB K02401 flhB; flagellar biosynthesis protein FlhB
D CFU_0935 flhE; Flagellar protein K03516 flhE; flagellar protein FlhE
D CFU_0963 fliG; Flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D CFU_0957 fliL; Flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D CFU_0956 fliM; Flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CFU_0964 fliF; Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D CFU_0947 flgI; Flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D CFU_0938 flgA; Flagellar basal-body P-ring formation protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D CFU_0946 flgH; Flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D CFU_0958 fliK; Flagellar biosynthesis protein K02415 fliL; flagellar protein FliL
D CFU_0965 fliE; Flagellar hook-basal body complex protein K02408 fliE; flagellar hook-basal body complex protein FliE
D CFU_0959 Flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D CFU_0940 flgB; Flagellar basal-body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D CFU_0941 flgC; Flagellar basal-body rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D CFU_0942 flgD; Flagellar basal-body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D CFU_0944 flgF; Flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D CFU_0945 flg; Flagellar basal-body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D CFU_0948 flgJ; Flagellar protein peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ
D CFU_0943 flgE; Flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D CFU_0949 flgK; Flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D CFU_0950 Flagellar hook-associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D CFU_0936 flgN; Flagellar biosynthesis protein K02399 flgN; flagellar biosynthesis protein FlgN
D CFU_0967 flgL; Flagellar biosynthesis protein K02406 fliC; flagellin
D CFU_0969 fliD; Flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2
D CFU_0970 fliS; Flagellar biosynthesis protein K02422 fliS; flagellar secretion chaperone FliS
D CFU_0978 flhD; Flagellar transcriptional activator K02403 flhD; flagellar transcriptional activator FlhD
D CFU_0979 flhC; Flagellar transcriptional activator K02402 flhC; flagellar transcriptional activator FlhC
D CFU_0934 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D CFU_0980 motA; Flagellar motor rotation protein K02556 motA; chemotaxis protein MotA
D CFU_0981 motB; Flagellar motor rotation protein K02557 motB; chemotaxis protein MotB
D CFU_1281 putative amino acid ABC transporter, periplasmic-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D CFU_0937 flgM; Negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
D CFU_0968 fliC; Flagellin protein K06603 flaG; flagellar protein FlaG
D CFU_0932 flhF; Flagellar biosynthesis protein flhF K02404 flhF; flagellar biosynthesis protein FlhF
D CFU_0933 flhG; Flagellar synthesis regulator fleN K04562 flhG; flagellar biosynthesis protein FlhG
D CFU_0793 pilG; twitching motility protein K02657 pilG; twitching motility two-component system response regulator PilG
D CFU_0794 pilH; twitching motility protein K02658 pilH; twitching motility two-component system response regulator PilH
D CFU_0795 pilI; type IV pili signal transduction protein K02659 pilI; twitching motility protein PilI
D CFU_0796 pilJ; twitching motility protein K02660 pilJ; twitching motility protein PilJ
D CFU_0797 cheA; Chemotaxis protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D CFU_3880 pilR; type 4 fimbriae expression regulatory protein K02667 pilR; two-component system, NtrC family, response regulator PilR
D CFU_3883 pilS; two-component sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D CFU_0755 pilT; Twitching motility protein K02669 pilT; twitching motility protein PilT
D CFU_0754 pilU; Twitching motility protein K02670 pilU; twitching motility protein PilU
D CFU_1288 twitching motility protein K02670 pilU; twitching motility protein PilU
D CFU_3797 Fimbrial protein ecpC precursor (Pilin) K02650 pilA; type IV pilus assembly protein PilA
D CFU_4446 Type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
D CFU_3922 pilB; Type 4 fimbrial assembly, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D CFU_3923 pilC; Type 4 fimbrial assembly protein pilC K02653 pilC; type IV pilus assembly protein PilC
D CFU_3924 pilD; Leader peptidase (Prepilin peptidase) K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CFU_1914 pilF; hypothetical protein K02656 pilF; type IV pilus assembly protein PilF
D CFU_0457 pilQ; Type IV pilus biogenesis protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D CFU_0456 pilP; Type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
D CFU_0455 pilO; Type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D CFU_0454 pilN; Type IV pilus biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D CFU_0453 pilM; Type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
D CFU_1821 pilZ; Type IV pilus biogenesis protein K02676 pilZ; type IV pilus assembly protein PilZ
D CFU_4442 pilV; type 4 fimbrial biogenesis protein PilV K02671 pilV; type IV pilus assembly protein PilV
D CFU_2643 type-4 fimbrial biogenesis transmembrane protein K02671 pilV; type IV pilus assembly protein PilV
D CFU_3606 type 4 fimbrial biogenesis protein PilV K02671 pilV; type IV pilus assembly protein PilV
D CFU_2642 fimbrial biogenesis protein K02672 pilW; type IV pilus assembly protein PilW
D CFU_3605 pilW; Prepilin-type cleavage/methylation-like protein K02672 pilW; type IV pilus assembly protein PilW
D CFU_3397 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D CFU_4443 type IV pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D CFU_3604 type IV pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D CFU_4444 type 4 fimbrial biogenesis protein PilY1 K02674 pilY1; type IV pilus assembly protein PilY1
D CFU_2641 type 4 fimbrial biogenesis protein K02674 pilY1; type IV pilus assembly protein PilY1
D CFU_3603 type 4 fimbrial biogenesis protein PilY1 K02674 pilY1; type IV pilus assembly protein PilY1
D CFU_2644 fimbrial biogenesis protein K02655 pilE; type IV pilus assembly protein PilE
D CFU_3602 type IV pilus biogenesis protein PilE K02655 pilE; type IV pilus assembly protein PilE
D CFU_0852 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D CFU_0853 putative membrane protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CFU_0854 cpaB; Flp pilus assembly protein K02279 cpaB; pilus assembly protein CpaB
D CFU_2222 flp pilus assembly protein secretin K02280 cpaC; pilus assembly protein CpaC
D CFU_0855 cpaC; Type II/IV secretion system secretin, associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
D CFU_0856 cpaE; Flp pilus assembly protein, ATPase K02282 cpaE; pilus assembly protein CpaE
D CFU_2220 tadA; flp pilus assembly ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CFU_0857 cpaF; type II secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CFU_3577 fimA; Fimbrial protein precursor K07345 fimA; major type 1 subunit fimbrin (pilin)
D CFU_2415 papD; putative pilus assembly protein chaperone K07346 fimC; fimbrial chaperone protein
D CFU_1577 Fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein
D CFU_1578 bcfC; Outer membrane usher protein K07347 fimD; outer membrane usher protein
D CFU_2416 fimD; putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D CFU_3575 htrE; Putative fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D CFU_1576 sfmA; Fimbrial subunit K07352 sfmA; type 1 fimbrial protein
D CFU_1641 putative signal peptide protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D CFU_2414 Protein U precursor K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D CFU_2417 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cfu04812]
D CFU_4120 mreB; Rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CFU_3936 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D CFU_3938 ftsA; Cell division protein ftsA K03590 ftsA; cell division protein FtsA
D CFU_3907 minC; Septum site-determining protein minC K03610 minC; septum site-determining protein MinC
D CFU_3908 minD; Septum site-determining protein minD K03609 minD; septum site-determining protein MinD
D CFU_3909 minE; Cell division topological specificity factor minE K03608 minE; cell division topological specificity factor
D CFU_0244 hypothetical protein K03496 parA; chromosome partitioning protein
D CFU_4402 parA; Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D CFU_4401 parB; Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cfu04147]
D CFU_2544 htpG; Chaperone protein K04079 HSP90A; molecular chaperone HtpG
D CFU_2568 fbaB; Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CFU_1252 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CFU_3254 gap; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CFU_3788 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CFU_3787 pykA; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CFU_3464 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CFU_2341 ppiB; peptidyl-prolyl cis-trans isomerase B (rotamase B)-like protein K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CFU_3105 Microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CFU_3721 mopA; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CFU_3847 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CFU_1453 pgi1; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CFU_1358 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CFU_0386 tufB; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D CFU_0523 hitA; putative Histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CFU_1800 Putative sodium/bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CFU_2562 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFU_3992 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFU_3993 lcfA; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFU_1209 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CFU_4265 fadA2; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_3460 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_0489 bktB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_1212 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CFU_4028 acyH; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CFU_1223 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CFU_2935 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CFU_2837 argG2; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CFU_3232 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CFU_1538 metB; Cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D CFU_3218 fahA; Fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D CFU_1061 fbp; Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CFU_0751 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CFU_0435 hemB; Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CFU_1560 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CFU_2083 bllY; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CFU_2828 Pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D CFU_3890 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CFU_3891 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CFU_4427 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CFU_3953 purH; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CFU_3229 peptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D CFU_1754 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_3556 lpd; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CFU_1164 etfA; Electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D CFU_3983 gdhA; NAD-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D CFU_1445 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CFU_1452 zwf2; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CFU_1589 cbbJ; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CFU_4064 gpmA; Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:cfu02048]
D CFU_0004 hsdR; Type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CFU_0006 hsdA; restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CFU_0005 hsdM; N-6 DNA methylase:Type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CFU_1006 prophage PSPPH02, putative adenine modification methytransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CFU_0516 yhdJ; putative DNA-methyltransferase (DNA modification methylase) K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D CFU_3378 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CFU_2807 hypothetical protein K19048 symE; toxic protein SymE
D CFU_0009 yhaV; conserved hypothetical protein K19155 yhaV; toxin YhaV [EC:3.1.-.-]
D CFU_0010 prlF; Transcriptional regulator K19156 prlF; antitoxin PrlF
D CFU_1948 hipA; HipA-like protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CFU_4135 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D CFU_3816 hypothetical protein K21498 higA-1; antitoxin HigA-1
D CFU_2548 putative nucleic acid-binding protein,contains PIN domain K07062 fitB; toxin FitB [EC:3.1.-.-]
D CFU_2549 hypothetical protein K21495 fitA; antitoxin FitA
D CFU_3936 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D CFU_4120 mreB; Rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CFU_2537 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CFU_2535 Topoisomerase type IIAb K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CFU_3475 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CFU_1750 YgfY K09159 cptB; antitoxin CptB
D CFU_3130 iscS2; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CFU_2173 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:cfu04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:cfu04052]
D CFU_3054 putative acyl-CoA-binding protein (ACBP) K08762 DBI; diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein)
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:cfu04090]
C 01504 Antimicrobial resistance genes [BR:cfu01504]
D CFU_2249 Tetracycline-efflux transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D CFU_1378 penA; Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CFU_2528 signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CFU_0184 sensor kinase protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CFU_1243 Heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D CFU_2527 putative response regulator for cobalt zinc cadmium resistance transcription regulator protein K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CFU_0183 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CFU_1244 DNA-binding heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D CFU_2335 membrane protein, putative K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D CFU_0834 acrA; Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D CFU_0833 Inner membrane efflux transporter of RND family multidrug efflux pump K18138 acrB; multidrug efflux pump
D CFU_0832 Outer membrane protein of RND family multidrug efflux pump K18139 oprM; outer membrane protein, multidrug efflux system
D CFU_2445 putative transport/efflux transmembrane protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D CFU_2444 acriflavin resistance protein K18303 mexK; multidrug efflux pump
D CFU_2963 cueR; MerR transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D CFU_1066 putative transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D CFU_2228 putative transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D CFU_0836 tolC; Type I secretion outer membrane protein, precursor K12340 tolC; outer membrane protein
D CFU_1831 tolC2; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D CFU_3474 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D CFU_2669 outer membrane efflux protein K12340 tolC; outer membrane protein
D CFU_3588 bvgA; DNA-binding response regulator, LuxR family K07690 evgA; two-component system, NarL family, response regulator EvgA
D CFU_3221 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D CFU_0366 ceoR; transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D CFU_2590 Cation/multidrug efflux system, mebrane-fusion component K18901 bpeE; membrane fusion protein, multidrug efflux system
D CFU_2591 AcrB/AcrD/AcrF family protein K18902 bpeF; multidrug efflux pump
D CFU_2592 Outer membrane component of tripartite multidrug resistance system K18903 oprC; outer membrane protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:cfu00536]
D CFU_2247 Polymorphic membrane protein, Filamentous hemagglutinin/Adhesin K15125 fhaB; filamentous hemagglutinin
D CFU_1733 filamentous hemagglutinin family outer membrane protein K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cfu00537]
D CFU_3890 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CFU_3891 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CFU_0171 treA; Trehalase; periplasmic precursor K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D CFU_3105 Microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cfu03100]
D CFU_5044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CFU_5009 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CFU_5049 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CFU_5056 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CFU_5061 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CFU_5038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CFU_5019 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CFU_5028 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CFU_5037 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CFU_5024 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CFU_5059 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CFU_5026 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CFU_5033 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CFU_5005 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CFU_5042 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CFU_5043 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CFU_5032 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CFU_5034 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CFU_5002 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CFU_5046 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CFU_5040 tRNA-His K14226 tRNA-His; tRNA His
D CFU_5008 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CFU_5057 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CFU_5050 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CFU_5016 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CFU_5012 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CFU_5021 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CFU_5025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CFU_5022 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CFU_5027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CFU_5041 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CFU_5030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CFU_5035 tRNA-Met K14230 tRNA-Met; tRNA Met
D CFU_5036 tRNA-Met K14230 tRNA-Met; tRNA Met
D CFU_5045 tRNA-Met K14230 tRNA-Met; tRNA Met
D CFU_5013 tRNA-Met K14230 tRNA-Met; tRNA Met
D CFU_5052 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CFU_5018 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CFU_5029 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CFU_5053 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CFU_5031 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CFU_5020 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CFU_5023 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CFU_5039 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CFU_5014 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CFU_5003 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CFU_5006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CFU_5004 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CFU_5001 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CFU_5015 tRNA-Val K14237 tRNA-Val; tRNA Val
D CFU_5060 tRNA-Val K14237 tRNA-Val; tRNA Val
D CFU_5017 tRNA-Val K14237 tRNA-Val; tRNA Val
D CFU_5007 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CFU_5051 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CFU_5058 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CFU_5010 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CFU_5048 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CFU_5055 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CFU_5011 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D CFU_5047 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D CFU_5054 5S RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CFU_1650 yafB; Methylglyoxal reductase, acetol producing / 2,5-diketo-D-gluconic acid reductase B K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D CFU_3497 Nucleoside-diphosphate-sugar epimerase K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D CFU_3492 D-beta-hydroxybutyrate dehydrogenase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]
D CFU_3108 aldo/keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D CFU_4429 2-Keto-D-gluconate dehydrogenase, membrane-bound, gamma subunit K23274 fdhS; fructose 5-dehydrogenase small subunit [EC:1.1.5.14]
D CFU_0207 Aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D CFU_4018 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D CFU_0134 fadH; NADH:flavin oxidoreductase/NADH oxidase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D CFU_1512 Quinone oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D CFU_2290 Isoquinoline 1-oxidoreductase alpha subunit K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D CFU_0189 iorA; Isoquinoline 1-oxidoreductase alpha subunit K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D CFU_2291 iorB2; Isoquinoline 1-oxidoreductase beta subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D CFU_0190 iorB; Isoquinoline 1-oxidoreductase beta subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D CFU_0307 hypothetical protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D CFU_1607 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D CFU_3416 qor3; Quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CFU_1056 qor; Quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CFU_2405 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase (NADPH:quinone reductase) K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CFU_2269 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D CFU_1521 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D CFU_1637 (Acyl-carrier protein) phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D CFU_0293 FMN-dependent NADH-azoreductase 2 K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D CFU_0911 FMN-dependent NADH-azoreductase 4 K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D CFU_0032 ahpF; Alkyl hydroperoxide reductase protein F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D CFU_1483 msrA; peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CFU_3780 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CFU_2400 msrB; methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CFU_1582 gst7; Glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D CFU_0491 Glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D CFU_0441 putative Sulfite oxidase K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D CFU_0144 putative lipoprotein transmembrane K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D CFU_2467 bcp; Thiol peroxidase, Bcp-type K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CFU_0772 Redoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CFU_0431 lsfA; Peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CFU_0033 ahpC; Alkyl hydroperoxide reductase protein C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D CFU_2569 osmC; Osmotically inducible protein C K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D CFU_0922 ohr; Organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D CFU_1947 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D CFU_3410 pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D CFU_1737 Pirin-like protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D CFU_2069 Cysteine dioxygenase K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91]
D CFU_1648 piuC; Iron-uptake factor K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D CFU_2294 pvdA; L-ornithine 5-monooxygenase K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196]
D CFU_2748 oxidoreductase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28]
D CFU_2966 copA; putative oxidase, putative copper oxidase K22348 moxA; manganese oxidase [EC:1.16.3.3]
D CFU_2448 Phytoene desaturase, pro-zeta-carotene producing K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D CFU_2393 fpr; Ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CFU_0382 arsC3; Arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D CFU_3193 arsC; Arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D CFU_3196 arsC2; Arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D CFU_2554 MoaA/NifB/PqqE family protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5]
D CFU_2998 dltE; putative short-chain dehydrogenase/reductase K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D CFU_0838 pcm; Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D CFU_1907 pcm2; putative L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D CFU_3779 cfa2; Cyclopropane fatty acid synthase-like methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CFU_3385 cfa; cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CFU_1962 tam; Trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D CFU_3309 nodulation protein K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D CFU_3541 paiA; transcriptional repressor of sporulation, septation and degradative enzyme K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D CFU_3615 cutE; Apolipoprotein N-acyltransferase/Copper homeostasis protein CutE K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D CFU_3006 aat; Leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D CFU_3735 hypothetical protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D CFU_3007 Arginine-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D CFU_1713 citG; Triphosphoribosyl-dephospho-CoA synthetase K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D CFU_0117 DTW domain containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D CFU_0895 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CFU_3493 Candidate type III effector Hop protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D CFU_1348 hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D CFU_3253 glnE; Glutamine-synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D CFU_0008 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D CFU_2260 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D CFU_3377 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D CFU_1712 mdcE; Phosphoribosyl-dephospho-CoA transferase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D CFU_2399 Selenoprotein O-like protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D CFU_4267 aceK; Isocitrate dehydrogenase phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D CFU_0620 ptsK; HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D CFU_2017 frc; Formyl-coenzyme A transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D CFU_2019 frc2; Formyl-coenzyme A transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D CFU_1192 CAIB/BAIF family protein K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20]
D CFU_2349 est; Esterase/lipase-like protein K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D CFU_1895 4-hydroxybenzoyl-CoA thioesterase domain protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CFU_1608 fcbC; thioesterase superfamily K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CFU_3403 4-hydroxybenzoyl-CoA thioesterase family active site K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CFU_1664 Phosphoesterase PHP, N-terminal K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D CFU_2516 sixA; putative phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D CFU_1407 betC; Choline-sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6]
D CFU_2818 Putative deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CFU_2451 Putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CFU_1834 Micrococcal nuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D CFU_1275 dan; N-acyl-D-amino-acid deacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D CFU_4108 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CFU_1297 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CFU_3251 opaA; putative amidohydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D CFU_3049 polysaccharide deacetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D CFU_3458 atzB; Hydroxydechloroatrazine ethylaminohydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D CFU_1632 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CFU_2267 Adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25]
D CFU_2887 Maf/YceF/YhdE family protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D CFU_3733 moxR; putative methanol dehydrogenase regulatory protein (MoxR) like ATPAse K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CFU_3023 protein of unknown function DUF1234 K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D CFU_1710 mdcB; Malonate decarboxylase beta subunit K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87]
D CFU_1711 mdcC; Malonate decarboxylase gamma subunit K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87]
D CFU_3494 Ribulose-5-phosphate 4-epimerase related epimerase / aldolase K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D CFU_2411 YjeF protein, function unknown K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CFU_1588 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16]
D CFU_2193 fucU; sugar binding or transport, RbsD/FucU K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D CFU_4369 conserved hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D CFU_3496 hyi2; Hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D CFU_1324 cphA1; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D CFU_1325 cphA2; Cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D CFU_0782 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D CFU_3225 ATP dependent DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1]
D CFU_2518 rfnB; putative electron transport complex protein: ferredoxin subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D CFU_1128 cadA; Lead, cadmium, zinc and mercury transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D CFU_3705 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D CFU_0886 fdhD; Formate dehydrogenase chain D K02379 fdhD; FdhD protein
D CFU_3123 fdx2; Ferredoxin, 2Fe-2S K04755 fdx; ferredoxin, 2Fe-2S
D CFU_3061 fdxA2; Ferredoxin K05524 fdxA; ferredoxin
D CFU_2715 fdxA; Ferredoxin K05524 fdxA; ferredoxin
D CFU_3129 iscU; Iron-sulfur cluster assembly scaffold protein IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D CFU_1163 etfB; Electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D CFU_2814 aidB; Acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
D CFU_0865 Phosphoserine phosphatase K21830 pchP; phosphorylcholine phosphatase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CFU_1959 glyoxylase I family protein K08234 yaeR; glyoxylase I family protein
D CFU_0081 Glyoxalase/bleomycin resistance protein/dioxygenase K08234 yaeR; glyoxylase I family protein
D CFU_0756 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CFU_3746 conserved hypothetical protein; putative signal peptide K08992 lapA; lipopolysaccharide assembly protein A
D CFU_3745 putative heat shock protein K19804 lapB; lipopolysaccharide assembly protein B
D CFU_0823 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D CFU_1413 hemY; HemY-like protein K02498 hemY; HemY protein
D CFU_0644 ubiB; Ubiquinone biosynthesis monooxygenase K03688 ubiB; ubiquinone biosynthesis protein
D CFU_0643 uncharacterized protein conserved in bacteria K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D CFU_4164 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
C 99988 Secondary metabolism
D CFU_2744 NADPH:quinone oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D CFU_2830 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D CFU_2361 NADPH:quinone oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D CFU_4223 doxX; putative membrane protein K15977 K15977; putative oxidoreductase
D CFU_4089 putative membrane protein K15977 K15977; putative oxidoreductase
D CFU_3542 DoxX K15977 K15977; putative oxidoreductase
D CFU_2959 putative carboxylesterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CFU_1804 cspA; Cold shock protein K03704 cspA; cold shock protein
D CFU_1478 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D CFU_3267 RNA chaperone, transcription antiterminator, affects expression of rpoS and uspA K03704 cspA; cold shock protein
D CFU_4161 glnK2; Nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D CFU_3919 yhgF; putative Polyribonucleotide nucleotidyltransferase K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D CFU_3266 clpS; ATP-dependent Clp protease adaptor protein clpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CFU_2442 tig; Cell division trigger factor K03545 tig; trigger factor
D CFU_0442 putative membrane protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D CFU_0818 fdhE; formate dehydrogenase formation protein K02380 fdhE; FdhE protein
D CFU_2855 ureE; Urease accessory protein K03187 ureE; urease accessory protein
D CFU_2856 ureF; Urease accessory protein K03188 ureF; urease accessory protein
D CFU_2857 ureG; Urease accessory protein K03189 ureG; urease accessory protein
D CFU_2851 ureD; Urease accessory protein K03190 ureD; urease accessory protein
D CFU_2858 ureJ; HupE-UreJ family metal transporter K03192 ureJ; urease accessory protein
D CFU_1354 smpB; tmRNA-binding protein SmpB K03664 smpB; SsrA-binding protein
D CFU_4165 comM; MG(2+) chelatase family protein K07391 comM; magnesium chelatase family protein
D CFU_1647 hypothetical protein K07394 K07394; SM-20-related protein
D CFU_3835 hypothetical protein K07395 K07395; putative proteasome-type protease
D CFU_3203 Thioredoxin-like protein K07396 K07396; putative protein-disulfide isomerase
D CFU_3969 OsmC/Ohr family protein K07397 yhfA; putative redox protein
D CFU_2362 hypothetical protein K07397 yhfA; putative redox protein
D CFU_0438 Cytochrome c-type biogenesis protein Ccs1/ResB K07399 resB; cytochrome c biogenesis protein
D CFU_4146 XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase) K07402 xdhC; xanthine dehydrogenase accessory factor
D CFU_2798 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor
D CFU_2622 Glutathione S-transferase-like protein K11208 yncG; GST-like protein
C 99976 Replication and repair
D CFU_1234 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D CFU_2902 rmuC; DNA recombination protein K09760 rmuC; DNA recombination protein RmuC
D CFU_4173 putative endonuclease K07460 yraN; putative endonuclease
D CFU_4106 smf; Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake K04096 smf; DNA processing protein
D CFU_2714 AAA ATPase, central domain protein K07478 ycaJ; putative ATPase
D CFU_3369 hypothetical protein K06919 K06919; putative DNA primase/helicase
D CFU_3579 Transposase-like protein K07491 rayT; REP-associated tyrosine transposase
D CFU_0501 Transposase-like protein K07491 rayT; REP-associated tyrosine transposase
D CFU_1861 Transposase IS3/IS911 K07497 K07497; putative transposase
D CFU_4141 yis2; Integrase, catalytic region K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D CFU_2812 conserved protein of unknown function likely to be involved in DNA repair K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CFU_2116 porin, Gram-negative type K03285 TC.GBP; general bacterial porin, GBP family
D CFU_3332 citM; citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D CFU_2480 pit; putative low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D CFU_1092 hypothetical protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D CFU_2712 Hydantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D CFU_0142 putative transport protein K07085 K07085; putative transport protein
C 99978 Cell growth
D CFU_2401 putative intracellular septation protein K06190 ispZ; intracellular septation protein
D CFU_4148 Stage V sporulation protein R K06415 spoVR; stage V sporulation protein R
D CFU_4065 Peptidase M23B precursor K22719 envC; murein hydrolase activator
C 99993 Cell motility
D CFU_3853 TfoX domain protein K07343 tfoX; DNA transformation protein and related proteins
D CFU_3576 pili assembly chaperone K15540 ecpD; chaperone protein EcpD
C 99995 Signaling proteins
D CFU_0163 proQ; Putative activator of osmoprotectant transporter ProP K03607 proQ; ProP effector
D CFU_4287 cstA; Carbon starvation protein A K06200 cstA; carbon starvation protein
D CFU_3440 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D CFU_3489 CBS domain containing membrane protein K07168 K07168; CBS domain-containing membrane protein
D CFU_0127 hypothetical regulatory protein K07169 K07169; FHA domain-containing protein
D CFU_3609 Phosphate starvation-inducible protein PhoH, putative ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D CFU_2468 protein involved in phosphorous metabolism K07175 phoH2; PhoH-like ATPase
D CFU_4150 prkA; putative serine protein kinase, PrkA K07180 prkA; serine protein kinase
D CFU_3235 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D CFU_2716 lolA; Outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D CFU_0613 lolB; putative Outer-membrane lipoprotein, precursor K02494 lolB; outer membrane lipoprotein LolB
D CFU_0507 vacJ; lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D CFU_2553 Outer membrane lipoprotein K06077 slyB; outer membrane lipoprotein SlyB
D CFU_3470 Rickettsia 17 kDa surface antigen K06077 slyB; outer membrane lipoprotein SlyB
D CFU_1340 ompH; outer membrane chaperone Skp K06142 hlpA; outer membrane protein
D CFU_1908 nlpD; lipoprotein precursor K06194 nlpD; lipoprotein NlpD
D CFU_3781 ompW; putative outer membrane protein W family K07275 ompW; outer membrane protein
D CFU_4416 asmA; conserved hypothetical protein; putative signal peptide K07290 yhjG; AsmA family protein
D CFU_2243 Membrane-fusion protein K01993 ABC-2.TX; HlyD family secretion protein
D CFU_2570 Osmotically inducible lipoprotein B precursor K04062 osmB; osmotically inducible lipoprotein OsmB
D CFU_4246 creD; Inner membrane protein CreD K06143 creD; inner membrane protein
D CFU_2733 putative surface polysaccharide polymerase K13662 gumE; putative polymerase
C 99994 Others
D CFU_2509 phoU; Phosphate transport system regulatory protein K02039 phoU; phosphate transport system protein
D CFU_3867 regulatory or redox component complexing with Bfr, in iron storage and mobility K02192 bfd; bacterioferritin-associated ferredoxin
D CFU_1429 mdoG; periplasmic glucan biosynthesis protein K03670 mdoG; periplasmic glucans biosynthesis protein
D CFU_1431 Glucans biosynthesis protein D K03670 mdoG; periplasmic glucans biosynthesis protein
D CFU_0429 cutA; Periplasmic divalent cation tolerance protein cutA K03926 cutA; periplasmic divalent cation tolerance protein
D CFU_0705 apaG; ApaG protein K06195 apaG; ApaG protein
D CFU_0446 cyaY; Frataxin-like protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CFU_1878 cvpA; Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D CFU_1617 chiIII; glycoside hydrolase, family 19; lytic protein K03791 K03791; putative chitinase
D CFU_2263 pqiB; Paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D CFU_3249 elaA; GCN5-related N-acetyltransferase K02348 elaA; ElaA protein
D CFU_2903 Hemoglobin-like protein K06886 glbN; hemoglobin
D CFU_1656 Patatin K07001 K07001; NTE family protein
D CFU_4093 Patatin K07001 K07001; NTE family protein
D CFU_2350 Patatin K07001 K07001; NTE family protein
D CFU_2506 serine protease K07001 K07001; NTE family protein
D CFU_1225 Patatin K07001 K07001; NTE family protein
D CFU_4075 Phosphoglycolate phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D CFU_3963 putative iron binding protein from the HesB_IscA_SufA family K15724 erpA; iron-sulfur cluster insertion protein
D CFU_2915 rbn; Ribonuclease BN K07058 K07058; membrane protein
D CFU_3066 brkB; Ribonuclease BN K07058 K07058; membrane protein
D CFU_1040 hypothetical protein K07146 K07146; UPF0176 protein
D CFU_2490 hypothetical protein K04750 phnB; PhnB protein
D CFU_3318 PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein K04750 phnB; PhnB protein
D CFU_2174 PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein K04750 phnB; PhnB protein
D CFU_2504 hypothetical protein K11477 glcG; glc operon protein GlcG
D CFU_2787 glcG; glcG protein K11477 glcG; glc operon protein GlcG
D CFU_3192 arsH; Arsenic resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D CFU_2299 Ferric reductase K13255 fhuF; ferric iron reductase protein FhuF
D CFU_4176 lemA2; LemA protein K03744 lemA; LemA protein
D CFU_3700 lemA; LemA PROTEIN K03744 lemA; LemA protein
D CFU_2255 hypothetical protein K03745 slyX; SlyX protein
D CFU_4105 smg; Protein of unknown function Smg K03747 smg; Smg protein
D CFU_2443 creA; Conserved uncharacterized protein K05805 creA; CreA protein
D CFU_1877 dedD; DedD protein K03749 dedD; DedD protein
D CFU_3570 dedA; DedA protein K03975 dedA; membrane-associated protein
D CFU_2261 pqiA; Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D CFU_2262 pqiA2; Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D CFU_4027 yvlD; conserved hypothetical protein K08972 K08972; putative membrane protein
D CFU_2831 hypothetical protein K08987 K08987; putative membrane protein
D CFU_1972 hypothetical protein K08995 K08995; putative membrane protein
D CFU_3477 hypothetical protein K11312 K11312; cupin 2 domain-containing protein
D CFU_2791 phnA2; Alkylphosphonate utilization operon protein K06193 phnA; protein PhnA
C 99997 Function unknown
D CFU_2450 Ankyrin repeat protein K06867 K06867; uncharacterized protein
D CFU_3693 ank-3; ankyrin repeat protein, putative K06867 K06867; uncharacterized protein
D CFU_3701 conserved hypothetical protein, putative glycine rich transmembrane protein K06872 K06872; uncharacterized protein
D CFU_0680 Hydrolase of the alpha/beta superfamily K06889 K06889; uncharacterized protein
D CFU_1638 peptidase S9/S15 K06889 K06889; uncharacterized protein
D CFU_0038 hypothetical protein K06889 K06889; uncharacterized protein
D CFU_2043 Phage baseplate assembly protein W K06903 W; Bacteriophage baseplate protein W
D CFU_1008 GPW/gp25 family K06903 W; Bacteriophage baseplate protein W
D CFU_1019 Phage late control D K06905 D; Bacteriophage probable baseplate hub protein
D CFU_2040 Phage protein D K06905 D; Bacteriophage probable baseplate hub protein
D CFU_1018 Phage P2 GpU K06906 gpU; phage tail protein
D CFU_1013 Major tail sheath protein K06907 FI; Bacteriophage tail sheath protein
D CFU_2035 Phage tail sheath protein FI K06907 FI; Bacteriophage tail sheath protein
D CFU_1014 phage-related tail protein K06908 FII; Bacteriophage tail tube protein
D CFU_3929 putative ATP/GTP-binding protein K06923 K06923; uncharacterized protein
D CFU_4388 putative NAD(P)-binding enzyme K06929 K06929; uncharacterized protein
D CFU_2327 putative DNA-binding protein with PD1-like DNA-binding motif K06934 K06934; uncharacterized protein
D CFU_4243 YbaK/prolyl-tRNA synthetase associated region K06938 K06938; uncharacterized protein
D CFU_1884 hypothetical protein K06938 K06938; uncharacterized protein
D CFU_0840 hypothetical protein K06940 K06940; uncharacterized protein
D CFU_2636 GTPase-like protein K06945 K06945; uncharacterized protein
D CFU_3884 conserved hypothetical protein K06950 K06950; uncharacterized protein
D CFU_2919 glutaryl 7-ACA acylase-like protein K06978 K06978; uncharacterized protein
D CFU_0349 putative dioxygenase K06991 K06991; uncharacterized protein
D CFU_2057 hypothetical protein K06996 K06996; uncharacterized protein
D CFU_0783 conserved hypothetical protein K07000 K07000; uncharacterized protein
D CFU_0210 putative exporter of the RND superfamily K07003 K07003; uncharacterized protein
D CFU_1635 Phosphohydrolase (MutT/nudix family protein) K07006 K07006; uncharacterized protein
D CFU_0146 putative iron-sulfur binding protein K07006 K07006; uncharacterized protein
D CFU_2779 yuiI; IroE protein K07017 K07017; uncharacterized protein
D CFU_4212 Alpha/beta hydrolase K07018 K07018; uncharacterized protein
D CFU_3792 putative Hydrolase, alpha/beta fold family K07019 K07019; uncharacterized protein
D CFU_2573 Glyoxalase family protein K07032 K07032; uncharacterized protein
D CFU_3227 yecA; conserved hypothetical protein; putative protein translocase subunit K07039 K07039; uncharacterized protein
D CFU_1692 hypothetical protein K07044 K07044; uncharacterized protein
D CFU_2993 amidohydrolase family protein K07045 K07045; uncharacterized protein
D CFU_1135 hypothetical protein K07054 K07054; uncharacterized protein
D CFU_2786 yraQ; putative permease K07089 K07089; uncharacterized protein
D CFU_4406 Membrane protein, putative K07090 K07090; uncharacterized protein
D CFU_3506 hypothetical protein K07090 K07090; uncharacterized protein
D CFU_3147 membrane protein, putative K07090 K07090; uncharacterized protein
D CFU_2351 putative membrane bound phosphoesterase K07098 K07098; uncharacterized protein
D CFU_1926 putative transferase K07101 K07101; uncharacterized protein
D CFU_2125 hypothetical protein K07112 K07112; uncharacterized protein
D CFU_2124 putative transmembrane protein K07112 K07112; uncharacterized protein
D CFU_4172 Putative lipoprotein K07121 K07121; uncharacterized protein
D CFU_2092 Oxidoreductase, short chain dehydrogenase/reductase family K07124 K07124; uncharacterized protein
D CFU_4034 Sel1-like repeat protein K07126 K07126; uncharacterized protein
D CFU_0035 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D CFU_0022 Sel1-like repeat protein K07126 K07126; uncharacterized protein
D CFU_4079 NAD(FAD)-utilizing dehydrogenase K07137 K07137; uncharacterized protein
D CFU_0587 putative iron-sulfur binding protein K07140 K07140; MOSC domain-containing protein
D CFU_0618 hypothetical protein K07157 K07157; uncharacterized protein
D CFU_4449 hypothetical protein K08998 K08998; uncharacterized protein
D CFU_0552 hypothetical protein K09004 K09004; uncharacterized protein
D CFU_2221 protein of unknown function DUF192 K09005 K09005; uncharacterized protein
D CFU_3271 exported protein K09005 K09005; uncharacterized protein
D CFU_1027 hypothetical protein K09117 K09117; uncharacterized protein
D CFU_3872 hypothetical protein K09131 K09131; uncharacterized protein
D CFU_4196 hypothetical protein K09158 K09158; uncharacterized protein
D CFU_2601 conserved hypothetical protein K09705 K09705; uncharacterized protein
D CFU_0711 yaiI; hypothetical protein K09768 K09768; uncharacterized protein
D CFU_4149 protein of unknown function DUF444 K09786 K09786; uncharacterized protein
D CFU_1221 Protein ycaR K09791 K09791; uncharacterized protein
D CFU_3598 Integral membrane protein K09799 K09799; uncharacterized protein
D CFU_1356 UPF0125 protein yfjF K09801 K09801; uncharacterized protein
D CFU_3313 hypothetical protein K09803 K09803; uncharacterized protein
D CFU_1265 hypothetical protein K09807 K09807; uncharacterized protein
D CFU_3857 virK; hypothetical protein K09824 virK; uncharacterized protein
D CFU_2264 hypothetical protein K09857 K09857; uncharacterized protein
D CFU_1587 yaaA; UPF0246 protein YaaA K09861 K09861; uncharacterized protein
D CFU_3927 Zinc-binding UPF0243 protein yacG K09862 K09862; uncharacterized protein
D CFU_0275 yaiL; nucleoprotein/polynucleotide-associated enzyme K09912 K09912; uncharacterized protein
D CFU_2344 yceH; hypothetical protein K09915 K09915; uncharacterized protein
D CFU_2753 hypothetical protein K09919 K09919; uncharacterized protein
D CFU_4037 conserved hypothetical protein K09921 K09921; uncharacterized protein
D CFU_1946 ycaQ; hypothetical protein K09927 K09927; uncharacterized protein
D CFU_3738 hypothetical protein K09941 K09941; uncharacterized protein
D CFU_0376 hypothetical protein K09946 K09946; uncharacterized protein
D CFU_1852 hypothetical protein K09954 K09954; uncharacterized protein
D CFU_0173 hypothetical protein K09958 K09958; uncharacterized protein
D CFU_2398 conserved hypothetical protein K09965 K09965; uncharacterized protein
D CFU_4076 conserved hypothetical protein K09973 K09973; uncharacterized protein
D CFU_2387 Conserved hypothetical protein K09975 K09975; uncharacterized protein
D CFU_2427 hypothetical protein K09977 K09977; uncharacterized protein
D CFU_3076 hypothetical protein K09981 K09981; uncharacterized protein
D CFU_0245 hypothetical protein K09983 K09983; uncharacterized protein
D CFU_1152 hypothetical protein K09983 K09983; uncharacterized protein
D CFU_2533 hypothetical protein K09989 K09989; uncharacterized protein
D CFU_3242 hypothetical protein K09990 K09990; uncharacterized protein
D CFU_2481 Phosphate transport regulator K07220 K07220; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 31, 2024