+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Cryptococcus gattii

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AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors E CGB_C2250W mRNA (guanine-N7-)-methyltransferase K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] E CGB_C2580W cdc2 cyclin-dependent kinase K04563 CDC28; cyclin-dependent kinase [EC:2.7.11.22] E CGB_N2440W cyclin-dependent protein kinase K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E CGB_B6560C mRNA guanylyltransferase K00987 CEG1; mRNA guanylyltransferase [EC:2.7.7.50] E CGB_F0190C polynucleotide 5'-phosphatase K01098 CET1; polynucleotide 5'-triphosphatase [EC:3.6.1.74] D Cap binding complex E CGB_B9260C hypothetical protein K12882 NCBP1; nuclear cap-binding protein subunit 1 E CGB_D3040W 20 kDa nuclear cap binding protein (ncbp) K12883 NCBP2; nuclear cap-binding protein subunit 2 C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) E CGB_G5350W hypothetical protein K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 D Pre-mRNA cleavage factor IIm (CFIIm) E CGB_E5530W hypothetical protein K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] E CGB_B2130W cleavage/polyadenylation specificity factor K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 D Cleavage and polyadenylation specificity factor (CPSF) complex E CGB_F5500C cleavage and polyadenylation specific protein K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 E CGB_D4680C cleavage and polyadenylation specificity factor subunit K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E CGB_L3380W cleavage and polyadenylation specificity factor K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E CGB_B6620W essential RNA-binding component of cleavage and polyadenylation factor; Yth1p K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 E CGB_C0660C hypothetical protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 E CGB_E0300W hypothetical protein K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 E CGB_D6080W mRNA polyadenylation-related protein K15541 MPE1; protein MPE1 E CGB_C2240C integral subunit of the pre-mRNA cleavage and polyadenylation factor (CPF) complex; Pfs2p K15542 PFS2; polyadenylation factor subunit 2 E CGB_C9540W histone lysine N-methyltransferase K14962 WDR82; COMPASS component SWD2 E CGB_B5461W protein phosphatase type 1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E CGB_B5790C protein serine/threonine phosphatase K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E CGB_D4250W phosphoprotein phosphatase K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] D Cleavage stimulation factor (CSTF) complex E CGB_H0530W polyadenylation factor 64 kDasubunit K14407 CSTF2; cleavage stimulation factor subunit 2 E CGB_B4570W cleavage stimulation factor, 77kDa subunit K14408 CSTF3; cleavage stimulation factor subunit 3 E CGB_F4140C cleavage/polyadenylation specificity factor K06100 SYMPK; symplekin D U7-dependent histone pre-mRNA processing factors E CGB_I3560W hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B' E CGB_A0460W pre-mRNA splicing factor K11088 SNRPD3; small nuclear ribonucleoprotein D3 E CGB_H5330W small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E E CGB_D5780C mRNA processing-related protein K11098 SNRPF; small nuclear ribonucleoprotein F E CGB_J0080C hypothetical protein K11099 SNRPG; small nuclear ribonucleoprotein G E CGB_D4680C cleavage and polyadenylation specificity factor subunit K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E CGB_L3380W cleavage and polyadenylation specificity factor K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E CGB_H0530W polyadenylation factor 64 kDasubunit K14407 CSTF2; cleavage stimulation factor subunit 2 E CGB_F4140C cleavage/polyadenylation specificity factor K06100 SYMPK; symplekin D DRB sensitivity inducing factor (DSIF) complex E CGB_H4580W transcription initiation protein spt4 K15171 SUPT4H1; transcription elongation factor SPT4 E CGB_A6680C pol II protein elongation factor K15172 SUPT5H; transcription elongation factor SPT5 D N6-methyltransferase complex E CGB_E5150C mRNA methyltransferase K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] E CGB_H1300W transcription regulator K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit E CGB_C6130W hypothetical protein K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] D Poly(A) addition factors E CGB_A5590C polynucleotide adenylyltransferase K14376 PAP; poly(A) polymerase [EC:2.7.7.19] D Negative regulators of mRNA 3' end processing E CGB_K3420C hypothetical protein K13192 RBM26; RNA-binding protein 26 C Other processing factors D CGB_D1380W zinc finger protein K13102 KIN; DNA/RNA-binding protein KIN17 D CGB_I4480C arsenite-resistant protein ASR2 K27103 SRRT; serrate RNA effector molecule D CGB_B3200C hypothetical protein K23039 NAB2; nuclear polyadenylated RNA-binding protein NAB2 B mRNA surveillance and transport factors C Transport factors D EJC complex E CGB_C7420C RNA binding protein K12876 RBM8A; RNA-binding protein 8A E CGB_D3450C hypothetical protein K12877 MAGOH; protein mago nashi E CGB_G2160W hypothetical protein K12881 THOC4; THO complex subunit 4 E CGB_A8290W ATP dependent RNA helicase K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] E CGB_C1160C hypothetical protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E CGB_G2460C hypothetical protein K25178 CCDC174; coiled-coil domain-containing protein 174 E CGB_D8450W hypothetical protein K14324 SAP18; histone deacetylase complex subunit SAP18 E CGB_C8600C RNA binding protein K14325 RNPS1; RNA-binding protein with serine-rich domain 1 E CGB_B9640C hypothetical protein K13171 SRRM1; serine/arginine repetitive matrix protein 1 D TREX complex E CGB_G2020C hypothetical protein K12878 THOC1; THO complex subunit 1 E CGB_A1680C nucleic acid binding protein K12879 THOC2; THO complex subunit 2 E CGB_G2160W hypothetical protein K12881 THOC4; THO complex subunit 4 E CGB_H4290W hypothetical protein K13174 THOC5; THO complex subunit 5 D TREX-2 complex E CGB_N2050C hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1 E CGB_I1740W hypothetical protein K11368 ENY2; enhancer of yellow 2 transcription factor E CGB_L3640C EF-hand calcium-binding protein, Caltractin-cdc31 subfamily K16466 CETN3; centrin-3 E CGB_E6610W hypothetical protein K23719 SAC3; nuclear mRNA export protein SAC3 D Nuclear pore complex E CGB_N0040C protein-nucleus import-related protein K09291 TPR; nucleoprotein TPR E CGB_M1070W component of the nuclear pore complex required for polyadenylated RNA export; Gle2p K14298 RAE1; mRNA export factor E CGB_H4680C vesicle budding-related protein K14004 SEC13; protein transport protein SEC13 E CGB_A2070C hypothetical protein K14304 NUP85; nuclear pore complex protein Nup85 E CGB_D8520C hypothetical protein K14308 NUP54; nuclear pore complex protein Nup54 E CGB_D5790W hypothetical protein K14306 NUP62; nuclear pore complex protein Nup62 E CGB_C6440C nucleoporin-interacting protein NIC96 K14309 NUP93; nuclear pore complex protein Nup93 E CGB_B6550C nucleoporin nup189 K14297 NUP98; nuclear pore complex protein Nup98-Nup96 E CGB_H5420C nuclear pore complex protein K14301 NUP107; nuclear pore complex protein Nup107 E CGB_H0250C hypothetical protein K14300 NUP133; nuclear pore complex protein Nup133 E CGB_F4320C hypothetical protein K14311 NUP188; nuclear pore complex protein Nup188 E CGB_D3510C hypothetical protein K14312 NUP155; nuclear pore complex protein Nup155 E CGB_D4240C hypothetical protein K14303 NUP160; nuclear pore complex protein Nup160 E CGB_E0120C structural constituent of nuclear pore K14310 NUP205; nuclear pore complex protein Nup205 E CGB_A4070W hypothetical protein K14307 NUPL1; nucleoporin p58/p45 E CGB_D4160W hypothetical protein K14315 NDC1; nucleoporin NDC1 E CGB_B9440C nuclear pore protein seh1 K14299 SEH1; nucleoporin SEH1 E CGB_F0200W hypothetical protein K18715 NUP159; nucleoporin NUP159 E CGB_D7580C hypothetical protein K18716 NUP42; nucleoporin NUP42 E CGB_D7470C hypothetical protein K18719 NUP82; nucleoporin NUP82 E CGB_A7240C nucleoporin nsp1 K18721 NUP1; nucleoporin NUP1 E CGB_B2310C hypothetical protein K18722 NUP2; nucleoporin NUP2 E CGB_L3640C EF-hand calcium-binding protein, Caltractin-cdc31 subfamily K16466 CETN3; centrin-3 E CGB_I2410C poly(A)+ mRNA-nucleus export-related protein K18723 GLE1; nucleoporin GLE1 E CGB_H4510W hypothetical protein K14284 NXF; nuclear RNA export factor E CGB_C9100C hypothetical protein K14285 NXT1_2; NTF2-related export protein 1/2 E CGB_C0470W hypothetical protein K18725 POM152; nucleoporin POM152 D Ran-mediated transport factors E CGB_E3670W RAN small monomeric GTPase K07936 RAN; GTP-binding nuclear protein Ran E CGB_F6290W hypothetical protein K18726 FAF2; FAS-associated factor 2 E CGB_I3670W cell division cycle protein 48 K13525 VCP; transitional endoplasmic reticulum ATPase E CGB_J2180W hypothetical protein K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] E CGB_G4430C major karyopherin; Crm1p K14290 XPO1; exportin-1 E CGB_D5770W ran GTPase activator K14319 RANGAP1; Ran GTPase-activating protein 1 D eIF4F and regulatory proteins E CGB_C5050W cap binding protein K03259 EIF4E; translation initiation factor 4E E CGB_F5040W hypothetical protein K03259 EIF4E; translation initiation factor 4E E CGB_K0780C hypothetical protein K03259 EIF4E; translation initiation factor 4E E CGB_A9030W translation initiation factor K03257 EIF4A; translation initiation factor 4A E CGB_A3470W eukaryotic initiation factor 4F subunit P130 K03260 EIF4G; translation initiation factor 4G E CGB_A3640C eukaryotic initiation factor 4F subunit P130 K03260 EIF4G; translation initiation factor 4G E CGB_K4290C RNA-binding protein sce3 K03258 EIF4B; translation initiation factor 4B E CGB_A9270W ATP-dependent RNA helicase ded1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E CGB_F3470W cytoplasm protein K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E CGB_H1690W polyadenylate-binding protein K13126 PABPC; polyadenylate-binding protein E CGB_H5520W RNA helicase; Ski2p K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] E CGB_H2260W RNA helicase K18664 SLH1; antiviral helicase SLH1 [EC:5.6.2.6] E CGB_K2550W hypothetical protein K07575 MCTS; malignant T-cell-amplified sequence E CGB_E0760C hypothetical protein K24272 DENR; density-regulated protein D APOBEC1-ACF complex D Other transport factors E CGB_A6020W hypothetical protein K14294 WIBG; partner of Y14 and mago E CGB_N3100W subunit of cleavage factor I; Hrp1p K14411 MSI; RNA-binding protein Musashi E CGB_A1260W elongation factor 1 alpha-like protein K14416 HBS1; elongation factor 1 alpha-like protein E CGB_B1150C RNA-binding protein; Dom34p K06965 PELO; protein pelota E CGB_A1420W poly(A) binding protein K14396 PABPN1; polyadenylate-binding protein 2 E CGB_H2620C ATP-dependent RNA helicase K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] E CGB_E1530C spliceosome complex protein K12867 SYF1; pre-mRNA-splicing factor SYF1 E CGB_H3750W hypothetical protein K18732 SARNP; SAP domain-containing ribonucleoprotein E CGB_F0150C poly(a)+ RNA transport protein K11493 RCC1; regulator of chromosome condensation E CGB_N0140W SAC3/GANP domain protein associated with nuclear localization of protein K23802 LENG8; SAC3 family protein LENG8/THP3 C Surveillance factors D Surveillance complex E CGB_C8150C translation release factor K03265 ETF1; peptide chain release factor subunit 1 E CGB_F4530C translation elongation factor K03267 ERF3; peptide chain release factor subunit 3 E CGB_C4410W ATP-dependent RNA helicase of the SFI superfamily Nam7p K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E CGB_F4560W hypothetical protein K14327 UPF2; regulator of nonsense transcripts 2 E CGB_G2380W hypothetical protein K14328 UPF3; regulator of nonsense transcripts 3 D Protein phosphatase 2A E CGB_E4650C serine/threonine protein phosphatase 2A, catalytic subunit K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] E CGB_M3210W protein phosphatase PP2A regulatory subunit A K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A E CGB_F2280W protein phosphatase 2A regulatory B subunit K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B E CGB_L3430W B-type regulatory subunit of protein phosphatase 2A (PP2A); Rts1p K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' D Other surveillance factors E CGB_J1240C hypothetical protein K14409 SMG7; protein SMG7 E CGB_F3470W cytoplasm protein K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E CGB_A1210C GTP-binding protein 1 (g-protein 1) K24887 GTPBP1; GTP-binding protein 1 C Factors involved in mRNA localization D Cargo complex E CGB_B5770C hypothetical protein K14844 PUF6; pumilio homology domain family member 6 E CGB_D5620W cytoplasm protein K18738 HEK; heterogeneous nuclear rnp K-like protein E CGB_D9530C telomere length regulating RNA binding protein; Pbp2p K18738 HEK; heterogeneous nuclear rnp K-like protein E CGB_I1050W myosin class V protein MYO2p K10357 MYO5; myosin V D Factors that have mRNA localization signals D Trans-acting binding proteins E CGB_M1520C translation elongation factor EF1-alpha K03231 EEF1A; elongation factor 1-alpha E CGB_A4130C elongation factor 1-gamma (ef-1-gamma) K03233 EEF1G; elongation factor 1-gamma D Other mRNA localization factors E CGB_G3450C SSD1 protein K18748 SSD1; protein SSD1 C mRNA cycle factors D Common to processing body (P body) and stress granule E CGB_E4670W 5'-3' exonuclease involved in mRNA decay; Kem1p K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] E CGB_D9160C argonaute-like protein K11593 ELF2C; eukaryotic translation initiation factor 2C E CGB_D9320W eukaryotic translation initiation factor 2C 2 K11593 ELF2C; eukaryotic translation initiation factor 2C E CGB_C5050W cap binding protein K03259 EIF4E; translation initiation factor 4E E CGB_F5040W hypothetical protein K03259 EIF4E; translation initiation factor 4E E CGB_K0780C hypothetical protein K03259 EIF4E; translation initiation factor 4E E CGB_C4410W ATP-dependent RNA helicase of the SFI superfamily Nam7p K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E CGB_A9270W ATP-dependent RNA helicase ded1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E CGB_C1050W RNA helicase K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E CGB_I4260W hypothetical protein K18749 LSM14; protein LSM14 E CGB_E1240W importin beta-2 subunit K18752 TNPO1; transportin-1 E CGB_J1240C hypothetical protein K14409 SMG7; protein SMG7 E CGB_H5240W serine/threonine kinase K04345 PKA; protein kinase A [EC:2.7.11.11] E CGB_A3580C protein serine/threonine kinase K04345 PKA; protein kinase A [EC:2.7.11.11] E CGB_D9690C hypothetical protein K18757 LARP1; la-related protein 1 D P-body specific factors E CGB_K4260W deadenylation-dependent decapping-related protein K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E CGB_D0430C RNA cap binding protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E CGB_C2600W U6 snRNA-associated sm-like protein lsm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 E CGB_A8700W sm-like protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E CGB_C7440C hypothetical protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E CGB_B0090W hypothetical protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E CGB_N2270W U6 snRNA-associated sm-like protein lsm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E CGB_J1160C U6 snRNA binding protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E CGB_A6220C U6 snRNA-associated sm-like protein lsm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 E CGB_I1050W myosin class V protein MYO2p K10357 MYO5; myosin V E CGB_B4330C alpha tubulin K07374 TUBA; tubulin alpha E CGB_C8030C 3'-5' exoribonuclease K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E CGB_C5210C hypothetical protein K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E CGB_F1410W CCR4-NOT transcription complex subunit 3 (CCR4-associated factor 3) K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E CGB_A3070W transcriptional repressor K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E CGB_G1280W component of the CCR4-NOT transcriptional complex; Ccr4p K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E CGB_D2510C ccr4-not transcription complex, subunit 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E CGB_I2170W subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex; Pan2p K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E CGB_I3370C poly(A)-specific ribonuclease K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 E CGB_A7230W cytosolic small ribosomal subunit protein K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 E CGB_F4560W hypothetical protein K14327 UPF2; regulator of nonsense transcripts 2 E CGB_G2380W hypothetical protein K14328 UPF3; regulator of nonsense transcripts 3 E CGB_D7770C hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 E CGB_G3170C hypothetical protein K20102 YTHDF; YTH domain-containing family protein D Stress granule specific factors E CGB_I1590W non-translatable mRNA -binding protein K13201 TIA1; nucleolysin TIA-1/TIAR E CGB_H1690W polyadenylate-binding protein K13126 PABPC; polyadenylate-binding protein E CGB_B5280C RAN protein binding protein K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 E CGB_H0390W hypothetical protein K15026 EIF2A; translation initiation factor 2A E CGB_I1130W eukaryotic translation initiation factor PRT1p K03253 EIF3B; translation initiation factor 3 subunit B E CGB_A9030W translation initiation factor K03257 EIF4A; translation initiation factor 4A E CGB_C1160C hypothetical protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E CGB_K4290C RNA-binding protein sce3 K03258 EIF4B; translation initiation factor 4B E CGB_A3470W eukaryotic initiation factor 4F subunit P130 K03260 EIF4G; translation initiation factor 4G E CGB_A3640C eukaryotic initiation factor 4F subunit P130 K03260 EIF4G; translation initiation factor 4G E CGB_L1320C G protein beta subunit-like protein Rkp1 K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein E CGB_H4510W hypothetical protein K14284 NXF; nuclear RNA export factor E CGB_C1310C histone deacetylase clr3 K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] B mRNA degradation factors C 5'-3' decay D Decapping complex E CGB_K4260W deadenylation-dependent decapping-related protein K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E CGB_C1050W RNA helicase K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E CGB_A7230W cytosolic small ribosomal subunit protein K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 D Lsm complex E CGB_D0430C RNA cap binding protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E CGB_C2600W U6 snRNA-associated sm-like protein lsm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 E CGB_A8700W sm-like protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E CGB_C7440C hypothetical protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E CGB_B0090W hypothetical protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E CGB_N2270W U6 snRNA-associated sm-like protein lsm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E CGB_J1160C U6 snRNA binding protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E CGB_A6220C U6 snRNA-associated sm-like protein lsm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 D 5' exonucleases E CGB_E4670W 5'-3' exonuclease involved in mRNA decay; Kem1p K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] E CGB_F4240C strand exchange protein (5'-3' exoribonuclease) K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D Other 5'-3' decay factors E CGB_N1270C scavenger mRNA decapping enzyme DcpS (Hint-related 7meGMP-directed hydrolase) K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] C 3'-5' decay D Core exosome factors E CGB_D4080C hypothetical protein K07573 CSL4; exosome complex component CSL4 E CGB_B1010C exosome complex exonuclease rrp4 K03679 RRP4; exosome complex component RRP4 E CGB_D5210W hypothetical protein K03681 RRP40; exosome complex component RRP40 E CGB_I1530W 3'-to-5' phosphorolytic exoribonuclease; Ski6p K11600 RRP41; exosome complex component RRP41 E CGB_I2130C hypothetical protein K12590 RRP46; exosome complex component RRP46 E CGB_I3550C hypothetical protein K12587 MTR3; exosome complex component MTR3 E CGB_F4390W hypothetical protein K12589 RRP42; exosome complex component RRP42 E CGB_A9640W ribosomal RNA-processing protein 43 K12586 RRP43; exosome complex component RRP43 E CGB_C3080W exosome complex exonuclease rrp45 K03678 RRP45; exosome complex component RRP45 D Exosome cofactors E CGB_J1480W nucleolar exosome component; Dis3p K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] E CGB_C6050C exosome complex exonuclease RRP6 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] E CGB_B2240C hypothetical protein K12592 C1D; exosome complex protein LRP1 D TRAMP complex E CGB_K1560W hypothetical protein K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] E CGB_B2650W mRNA-nucleus export-related protein K12597 AIR1_2; protein AIR1/2 E CGB_I1720C ATP-dependent RNA helicase (mRNA transport regulator MTR4) K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] D Ski complex E CGB_H5520W RNA helicase; Ski2p K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] E CGB_D4130W translation repressor K12600 SKI3; superkiller protein 3 E CGB_J1380W hypothetical protein K12602 WDR61; WD repeat-containing protein 61 D Ccr4-NOT complex E CGB_G1280W component of the CCR4-NOT transcriptional complex; Ccr4p K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E CGB_C8030C 3'-5' exoribonuclease K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E CGB_C5210C hypothetical protein K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E CGB_F1410W CCR4-NOT transcription complex subunit 3 (CCR4-associated factor 3) K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E CGB_A3070W transcriptional repressor K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E CGB_D2510C ccr4-not transcription complex, subunit 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E CGB_C3310C transcriptional regulator K12606 RCD1; CCR4-NOT transcription complex subunit 9 E CGB_E6340C ATP-dependent transporter K12608 CAF16; CCR4-NOT complex subunit CAF16 E CGB_A8650W regulation of transcription from Pol II promoter-related protein K12609 CAF120; CCR4-NOT transcriptional complex subunit CAF120 D Pan complex E CGB_I2170W subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex; Pan2p K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E CGB_I3370C poly(A)-specific ribonuclease K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 D Other 3'-5' decay factors E CGB_E2360C hypothetical protein K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-] E CGB_N1270C scavenger mRNA decapping enzyme DcpS (Hint-related 7meGMP-directed hydrolase) K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] E CGB_M1570W hypothetical protein K26109 NRDE2; nuclear exosome regulator NRDE2 E CGB_M1300C RNA binding protein K27407 VTS1; RNA-binding protein VTS1 C Other degradation factors D RNases # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E CGB_F1490W hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3] E CGB_B3220W RNA exonuclease; Rex2p K13288 orn; oligoribonuclease [EC:3.1.-.-] D Helicases D Other RNA degradosome components E CGB_D9780C enolase 1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E CGB_N0010W enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E CGB_D8480C 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C Other RNA degradation factors D Chaperones E CGB_D3070W heat shock protein K04043 dnaK; molecular chaperone DnaK E CGB_A2320W heat shock protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Others D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome E CGB_B1010C exosome complex exonuclease rrp4 K03679 RRP4; exosome complex component RRP4 E CGB_D4080C hypothetical protein K07573 CSL4; exosome complex component CSL4 D Cofactors E CGB_I1530W 3'-to-5' phosphorolytic exoribonuclease; Ski6p K11600 RRP41; exosome complex component RRP41 E CGB_F4390W hypothetical protein K12589 RRP42; exosome complex component RRP42 D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024