+F Repair protein KO
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DNA Repair and Recombination Proteins - Cryptococcus gattii
%
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
C BER (base exicision repair)
D DNA glycosylases
E CGB_A7690W uracil DNA N-glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E CGB_F5460C hypothetical protein K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
E CGB_B0690W A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E CGB_B4250W purine-specific oxidized base lesion DNA N-glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E CGB_G1430W DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E CGB_L1330C DNA-(apurinic or apyrimidinic site) lyase K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
E CGB_H3800W DNA-(apurinic or apyrimidinic site) lyase K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F CGB_K3720C delta DNA polymerase K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F CGB_B8190W DNA polymerase delta, small subunit K02328 POLD2; DNA polymerase delta subunit 2
F CGB_C9570W hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3
F CGB_L3530C hypothetical protein K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F CGB_K2570C DNA polymerase epsilon, catalytic subunit A K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F CGB_F1400C epsilon DNA polymerase K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F CGB_G1400W DNA polymerase epsilon p12 subunit (dna polymerase epsilon subunit 4) K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
E CGB_M1090C DNA processivity factor; Pol30p K04802 PCNA; proliferating cell nuclear antigen
E CGB_D3420W flap endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E CGB_H3700W DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
D Other BER factors
E CGB_D5760W hypothetical protein K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E CGB_C7100C hypothetical protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E CGB_A9280C hypothetical protein K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E CGB_H2300W hypothetical protein K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F CGB_D7540C hypothetical protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F CGB_A8600W uv excision repair protein rhp23 K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F CGB_A3220W ubiquitin-protein ligase K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F CGB_G0470C ubiquitin-protein ligase K10609 CUL4; cullin 4
F CGB_G1120W hypothetical protein K10610 DDB1; DNA damage-binding protein 1
E NER4 complex
F CGB_D3060W DNA dependent ATPase K15082 RAD7; DNA repair protein RAD7
F CGB_E0440W DNA repair protein rad16 K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F CGB_E5020W DNA-directed RNA polymerase II largest subunit K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F CGB_D6240C DNA-dependent RNA polymerase II RPB140 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F CGB_E6710C RNA polymerase II subunit 3 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F CGB_I1280W hypothetical protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F CGB_H2540C DNA-directed RNA polymerases I, II and III polypeptide K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F CGB_D7770C hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F CGB_H3630W DNA-directed RNA polymerases I, II and III 17.1 kDapolypeptide K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F CGB_B5180W DNA-directed RNA polymerase II 13.3 kDa polypeptide K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
E Cul4-CSA complex
F CGB_A3220W ubiquitin-protein ligase K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F CGB_G0470C ubiquitin-protein ligase K10609 CUL4; cullin 4
F CGB_G1120W hypothetical protein K10610 DDB1; DNA damage-binding protein 1
E Other TCR factor
F CGB_A2190C cell growth-related protein K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E CGB_A6410W general RNA polymerase II transcription factor K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E CGB_A6060C general RNA polymerase II transcription factor K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E CGB_C4580C hypothetical protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E CGB_H2410W component of RNA polymerase transcription factor TFIIH; Ssl1p K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E CGB_M0140C hypothetical protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E CGB_N1600W subunit of TFIIH and nucleotide excision repair factor 3 complexes K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E CGB_N2440W cyclin-dependent protein kinase K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E CGB_H2140W cyclin-dependent protein kinase regulator K06634 CCNH; cyclin H
E CGB_F5340C transcription/repair factor TFIIH subunit Tfb3 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E CGB_D5240W damaged DNA binding protein K07466 RFA1; replication factor A1
E CGB_D7370C hypothetical protein K10739 RFA2; replication factor A2
E CGB_A3320C single-stranded DNA binding protein 12k chain K10740 RPA3; replication factor A3
D Other NER factors
E CGB_G4750W DNA repair protein RAD14 K10847 XPA; DNA-repair protein complementing XP-A cells
E CGB_F5210C mating-type switching protein swi10 K10849 ERCC1; DNA excision repair protein ERCC-1
E CGB_L2190W single-stranded DNA endonuclease; Rad1p K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E CGB_B3600W single-stranded DNA specific endodeoxyribonuclease K10846 ERCC5; DNA excision repair protein ERCC-5
E CGB_H3700W DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E CGB_E1180W hypothetical protein K15075 MET18; DNA repair/transcription protein MET18/MMS19
E CGB_G0120W ubiquitin-protein ligase K03869 CUL3; cullin 3
E CGB_B3080W transcriptional elongation regulator K03872 ELOC; elongin-C
E CGB_L1180W pof4 protein K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E CGB_A8580C DNA mismatch repair protein MSH2 K08735 MSH2; DNA mismatch repair protein MSH2
E CGB_C2370C hypothetical protein K08736 MSH3; DNA mismatch repair protein MSH3
E CGB_K1250C DNA mismatch repair-related protein K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E CGB_E6200C MUTL-like protein 1 K08734 MLH1; DNA mismatch repair protein MLH1
E CGB_C3590W ATPase K10858 PMS2; DNA mismatch repair protein PMS2
E CGB_D4110W mismatch repair-related protein K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E CGB_K3720C delta DNA polymerase K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E CGB_B8190W DNA polymerase delta, small subunit K02328 POLD2; DNA polymerase delta subunit 2
E CGB_C9570W hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3
E CGB_L3530C hypothetical protein K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E CGB_D5240W damaged DNA binding protein K07466 RFA1; replication factor A1
E CGB_D7370C hypothetical protein K10739 RFA2; replication factor A2
E CGB_A3320C single-stranded DNA binding protein 12k chain K10740 RPA3; replication factor A3
D RFC (replication factor C)
E CGB_K2700C DNA replication activator 1 subunit1 (Replication factor C subunit 1) K10754 RFC1; replication factor C subunit 1
E CGB_G3360C subunit of heteropentameric Replication factor C (RF-C); Rfc3p K10755 RFC2_4; replication factor C subunit 2/4
E CGB_L0470C DNA replication factor (activator 1 subunit) K10755 RFC2_4; replication factor C subunit 2/4
E CGB_N0500W DNA replication factor K10756 RFC3_5; replication factor C subunit 3/5
E CGB_A1550C subunit of DNA Replication factor C (RF-C); Rfc5p K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E CGB_M1090C DNA processivity factor; Pol30p K04802 PCNA; proliferating cell nuclear antigen
E CGB_B9610W exonuclease K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E CGB_H3700W DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E CGB_H5160C hypothetical protein K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E CGB_E0670W meiotic DNA double-strand break processing-related protein K10865 MRE11; double-strand break repair protein MRE11
E CGB_N1500W DNA repair protein Rad50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA1-core complex
D BRCA1-A complex
D BRCA1-B complex
D BRCA1-C complex
E CGB_E0670W meiotic DNA double-strand break processing-related protein K10865 MRE11; double-strand break repair protein MRE11
E CGB_N1500W DNA repair protein Rad50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA complex
E CGB_G2270W hypothetical protein K08775 BRCA2; breast cancer 2 susceptibility protein
E CGB_A8080W recombinase K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E CGB_A8080W recombinase K04482 RAD51; DNA repair protein RAD51
E CGB_A3450C DNA repair protein Rad51 K10870 RAD51L2; RAD51-like protein 2
E CGB_K1500C RAD57 protein K10958 RAD57; DNA repair protein RAD57
D Rad52 family proteins
E CGB_B8180C DNA strand annealing protein K10873 RAD52; DNA repair and recombination protein RAD52
D Rad54 family proteins
E CGB_D5430C DNA recombination and repair protein Rad54B K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E CGB_C6020W DNA repair protein K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
D RecQ family DNA helicases
E CGB_J2440C ATP-dependent DNA helicase K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E CGB_C6500C ATP-dependent DNA helicase hus2/rqh1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E CGB_C6500C ATP-dependent DNA helicase hus2/rqh1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E CGB_D9400W DNA topoisomerase type I K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E CGB_G3340C hypothetical protein K10990 RMI1; RecQ-mediated genome instability protein 1
D RPA (replication factor A)
E CGB_D5240W damaged DNA binding protein K07466 RFA1; replication factor A1
E CGB_D7370C hypothetical protein K10739 RFA2; replication factor A2
E CGB_A3320C single-stranded DNA binding protein 12k chain K10740 RPA3; replication factor A3
D Protein phosphatase 4
E CGB_A4040C hypothetical protein K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E CGB_C7540W protein serine/threonine phosphatase 4 regulatory subunit 1 K15424 PPP4R1; serine/threonine-protein phosphatase 4 regulatory subunit 1
E CGB_J1260C nucleus protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
D SMC5-SMC6 complex
E CGB_I0100W nucleus protein K22803 SMC5; structural maintenance of chromosomes protein 5
E CGB_D6670C DNA repair-related protein K22804 SMC6; structural maintenance of chromosomes protein 6
E CGB_H0320C DNA repair-related protein K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E CGB_D5230C hypothetical protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E CGB_E0660C nucleus protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E CGB_K3270C hypothetical protein K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E CGB_A2010C endonuclease K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E CGB_N2050C hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1
E CGB_E0150C hypothetical protein K10991 SWI5; DNA repair protein Swi5/Sae3
E CGB_A3570C GIY-YIG type nuclease catalytic domain containing protein K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E CGB_B6350W hypothetical protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E CGB_F4100C hypothetical protein K11339 MORF4L1; mortality factor 4-like protein 1
E CGB_C3320W hypothetical protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E CGB_M2260C member of the DEAH family of helicases; Mph1p K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4]
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E CGB_H4420W hypothetical protein K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E CGB_B6310W damaged DNA binding protein K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E CGB_E0670W meiotic DNA double-strand break processing-related protein K10865 MRE11; double-strand break repair protein MRE11
E CGB_N1500W DNA repair protein Rad50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E CGB_K3320W DNA ligase (ATP) K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E CGB_E3020C hypothetical protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
D X-family DNA polymerases
E CGB_H2300W hypothetical protein K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E CGB_C7100C hypothetical protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E CGB_K3070W hypothetical protein K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-]
C FA (Fanconi anemia) pathway
D FA core complex
D FA core complex binding factors
D Bloom's syndrome complex (BTR)
E CGB_C6500C ATP-dependent DNA helicase hus2/rqh1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E CGB_D9400W DNA topoisomerase type I K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E CGB_G3340C hypothetical protein K10990 RMI1; RecQ-mediated genome instability protein 1
D FANCD2-I complex
D Downstream FA components
E CGB_G2270W hypothetical protein K08775 BRCA2; breast cancer 2 susceptibility protein
D Other FA pathway factors
E CGB_M3340W hypothetical protein K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E CGB_A8080W recombinase K04482 RAD51; DNA repair protein RAD51
E CGB_A3450C DNA repair protein Rad51 K10870 RAD51L2; RAD51-like protein 2
E CGB_H3330W telomeric DNA binding protein K11137 TELO2; telomere length regulation protein
E CGB_N0150C hypothetical protein K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E CGB_I1360C serine/threonine protein phosphatase 6, (PP6) (Protein phosphatase V) (PP-V) K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
D Ubiquitin ligases
D Others
E CGB_J1610W guanyl nucleotide binding protein K23314 WRAP53; telomerase Cajal body protein 1
E CGB_J2040W transcription factor K24752 WDR70; WD repeat-containing protein 70
E CGB_H5160C hypothetical protein K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D CGB_E4710W eta DNA polymerase K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D CGB_D2570C hypothetical protein K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D CGB_B2050C hypothetical protein K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D CGB_A2410C zeta DNA polymerase K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D CGB_A9410W ubiquitin-conjugating enzyme E2-17 kDa K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D CGB_L2250C hypothetical protein K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
D CGB_B3320W DNA repair protein RAD16; Rad16p K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D CGB_D1820C SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D CGB_I2280C DNA repair protein RAD5 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D CGB_F5420C hypothetical protein K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D CGB_E5170C hypothetical protein K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D CGB_M1090C DNA processivity factor; Pol30p K04802 PCNA; proliferating cell nuclear antigen
D CGB_G6140W hypothetical protein K26957 GCNA; germ cell nuclear acidic protein
B Check point factors
C Rad9-Hus1-Rad1 complex
D CGB_E1050W hypothetical protein K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D CGB_I4290C hypothetical protein K10903 HUS1; HUS1 checkpoint protein
D CGB_A0400W DNA repair protein Rad1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D CGB_A1780W RAD17 isoform 4 K06662 HRAD17; cell cycle checkpoint protein
D CGB_G3360C subunit of heteropentameric Replication factor C (RF-C); Rfc3p K10755 RFC2_4; replication factor C subunit 2/4
D CGB_L0470C DNA replication factor (activator 1 subunit) K10755 RFC2_4; replication factor C subunit 2/4
D CGB_N0500W DNA replication factor K10756 RFC3_5; replication factor C subunit 3/5
D CGB_A1550C subunit of DNA Replication factor C (RF-C); Rfc5p K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D CGB_A0400W DNA repair protein Rad1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D CGB_F6260W hypothetical protein K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D CGB_D9370W hypothetical protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D CGB_C9130W hypothetical protein K11272 MRC1; mediator of replication checkpoint protein 1
C Triple T complex
D CGB_H3330W telomeric DNA binding protein K11137 TELO2; telomere length regulation protein
D CGB_B8020C hypothetical protein K20403 TTI1; TELO2-interacting protein 1
C BAG6-UBL4A-GET4 complex
D CGB_L2580C hypothetical protein K23388 UBL4; ubiquitin-like protein 4
D CGB_A7310W cytoplasm protein K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D CGB_E4070C DNA-repair protein rad3 K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D CGB_F3720C telomere length control protein K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D CGB_G1060W hypothetical protein K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
D CGB_C1390W mih1p K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48]
D CGB_J1220W 14-3-3 protein K06630 YWHAE; 14-3-3 protein epsilon
D CGB_J1410C protein threonine/tyrosine kinase K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-]
D CGB_G1100C MYT1 kinase K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1]
D CGB_G3640W hypothetical protein K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1]
D CGB_H1070W ATPase K12196 VPS4; vacuolar protein-sorting-associated protein 4
D CGB_F1170C hypothetical protein K25059 SDE2; replication stress response regulator SDE2
B Other factors with a suspected DNA repair function
C DNA polymerases
D CGB_C2360W DNA-directed DNA polymerase K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
C Nucleases
D CGB_G0680W hypothetical protein K15340 DCLRE1A; DNA cross-link repair 1A protein
D CGB_M1270C hypothetical protein K17815 EXO5; exonuclease V [EC:3.1.-.-]
D CGB_B2870W hypothetical protein K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D CGB_N2390C helicase domain DNA excision repair protein (Rad26L) K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D CGB_C3450C nuclear matrix protein NMP200 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D CGB_K2410C pre-mRNA splicing factor CEF1 (PRP19-associated complex protein 85) K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D CGB_F2480C hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D CGB_G2330C nuclear mRNA splicing, via spliceosome-related protein K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D CGB_I3680C hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CGB_M2010W dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CGB_I4405C dUTPase; Dut1p K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CGB_E4330W ribonucleoside-diphosphate reductase large chain K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D CGB_K2480W ribonucleotide reductase small subunit K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D CGB_K1260W ribonucleoside-diphosphate reductase K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
C BER (base exicision repair)
D DNA glycosylases
E CGB_A7690W uracil DNA N-glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E CGB_D2530C DNA-3-methyladenine glycosidase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E CGB_B0690W A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E CGB_L0290C hypothetical protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E CGB_G1430W DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D RecJ
D DNA ligase
D DNA polymerase I
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E CGB_C0700C ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E CGB_C0700C ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
D RecFOR pathway proteins
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D CGB_I3680C hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CGB_M2010W dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CGB_I4405C dUTPase; Dut1p K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024