+D GENES KO
#
KEGG Orthology (KO) - Clostridium ljungdahlii
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:clj00010]
D CLJU_c20810 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLJU_c37130 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLJU_c03250 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJU_c25790 pfk1; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJU_c29050 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CLJU_c00660 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLJU_c02810 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLJU_c39130 tim; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CLJU_c39150 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLJU_c13400 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D CLJU_c39140 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CLJU_c39120 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CLJU_c39110 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLJU_c03260 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLJU_c08140 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CLJU_c37600 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJU_c09340 pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLJU_c29340 pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLJU_c19540 zinc-containing alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CLJU_c16510 adhE1; bifunctional aldehyde/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLJU_c16520 adhE2; bifunctional aldehyde/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLJU_c01190 predicted aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CLJU_c18270 predicted aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CLJU_c34210 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLJU_c06210 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:clj00020]
D CLJU_c06610 (Re)-citrate-synthase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3]
D CLJU_c06620 aconitate hydratase/aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CLJU_c24200 aconitate hydratase/aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CLJU_c30460 aconitate hydratase/aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CLJU_c06630 isocitrate dehydrogenase, NAD-dependent K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D CLJU_c37600 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJU_c22800 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CLJU_c40600 fumA; fumarate hydratase, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CLJU_c40590 fumB; fumarate hydratase, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CLJU_c37390 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CLJU_c06210 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CLJU_c09340 pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLJU_c29340 pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:clj00030]
D CLJU_c37130 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLJU_c11590 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CLJU_c12640 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CLJU_c03050 tktA1; transketolase, subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLJU_c03060 tktB1; transketolase, subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLJU_c25820 tktB2; transketolase, subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLJU_c25830 tktA2; transketolase, subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLJU_c39640 tal2; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CLJU_c02310 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CLJU_c18130 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CLJU_c18150 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D CLJU_c34210 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLJU_c41770 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CLJU_c13610 putative KDPG and KHG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CLJU_c11630 2-keto-3-deoxy-6-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CLJU_c11610 gluconokinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D CLJU_c20110 predicted tungsten-containing aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D CLJU_c20210 predicted tungsten-containing aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D CLJU_c00660 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLJU_c02810 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLJU_c29050 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CLJU_c03250 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJU_c25790 pfk1; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:clj00040]
D CLJU_c25850 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D CLJU_c04510 galU1; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLJU_c34190 galU2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLJU_c01210 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CLJU_c12640 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CLJU_c01200 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D CLJU_c11570 xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D CLJU_c14910 predicted carbohydrate kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D CLJU_c18250 xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D CLJU_c18240 predicted xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D CLJU_c42610 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D CLJU_c42590 rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D CLJU_c11560 zinc-containing alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CLJU_c00610 predicted dehydratase K22396 yjhG; xylonate dehydratase [EC:4.2.1.82]
D CLJU_c00600 predicted pyruvate-dependent class I aldolase K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28]
D CLJU_c28230 dihydrodipicolinate synthase K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28]
C 00051 Fructose and mannose metabolism [PATH:clj00051]
D CLJU_c39450 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CLJU_c05310 bifunctional enzyme mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CLJU_c05540 bifunctional enzyme mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CLJU_c01930 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLJU_c26540 predicted glucose-1-phosphate nucleotidyltransferase with a transferase hexapeptide repeat K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLJU_c42600 L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D CLJU_c42610 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D CLJU_c42590 rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D CLJU_c03250 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJU_c25790 pfk1; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJU_c29050 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CLJU_c20600 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D CLJU_c11560 zinc-containing alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CLJU_c18240 predicted xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D CLJU_c00660 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLJU_c02810 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLJU_c39130 tim; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CLJU_c02310 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CLJU_c26070 phosphoenolpyruvate: sugar phosphotransferase system (PTS), fructose/mannose specific IIA subunit K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D CLJU_c20590 fructose-specific PTS (phosphotransferase system) system enzyme IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:clj00052]
D CLJU_c01190 predicted aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CLJU_c18270 predicted aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CLJU_c21710 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLJU_c04510 galU1; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLJU_c34190 galU2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLJU_c34210 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLJU_c20810 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLJU_c33530 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CLJU_c03250 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJU_c25790 pfk1; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJU_c27650 mandelate racemase family protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
C 00053 Ascorbate and aldarate metabolism [PATH:clj00053]
D CLJU_c01210 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CLJU_c28130 glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D CLJU_c28170 putative glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D CLJU_c28100 D-galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
C 00500 Starch and sucrose metabolism [PATH:clj00500]
D CLJU_c04510 galU1; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLJU_c34190 galU2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLJU_c34210 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLJU_c20810 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLJU_c37130 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:clj00520]
D CLJU_c40420 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CLJU_c40440 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CLJU_c41780 gcaD; bifunctional protein GcaD K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CLJU_c02460 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLJU_c41980 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLJU_c03180 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CLJU_c02350 epsC; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CLJU_c34100 predicted UDP-N-acetyl-D-mannosamine 6-dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D CLJU_c34090 lipopolysaccharide biosynthesis protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D CLJU_c26790 predicted pleiotropic regulatory protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D CLJU_c34080 predicted UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D CLJU_c34070 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D CLJU_c05480 predicted polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D CLJU_c05510 predicted polysaccharide biosynthesis protein K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D CLJU_c01240 alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D CLJU_c20810 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLJU_c34210 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLJU_c04510 galU1; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLJU_c34190 galU2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLJU_c21710 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLJU_c33530 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CLJU_c37130 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLJU_c39450 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CLJU_c26540 predicted glucose-1-phosphate nucleotidyltransferase with a transferase hexapeptide repeat K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLJU_c01930 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLJU_c05310 bifunctional enzyme mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CLJU_c05540 bifunctional enzyme mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
C 00620 Pyruvate metabolism [PATH:clj00620]
D CLJU_c09340 pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLJU_c29340 pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLJU_c37600 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJU_c11960 predicted acetaldehyde dehydrogenase K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D CLJU_c39730 predicted acetaldehyde dehydrogenase K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D CLJU_c16510 adhE1; bifunctional aldehyde/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLJU_c16520 adhE2; bifunctional aldehyde/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLJU_c19540 zinc-containing alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CLJU_c12780 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CLJU_c12770 pta; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLJU_c03260 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLJU_c42100 accA; acetyl-coenzyme A carboxylase, subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CLJU_c42140 predicted biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CLJU_c42120 accC2; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CLJU_c42110 accD; acetyl-coenzyme A carboxylase, subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CLJU_c21570 predicted FAD/FMN-containing dehydrogenase K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436]
D CLJU_c21580 predicted electron transfer flavoprotein alpha subunit K26114 lctC; lactate dehydrogenase (NAD+,ferredoxin) subunit LctC
D CLJU_c21590 predicted electron transfer flavoprotein beta subunit K26115 lctB; lactate dehydrogenase (NAD+,ferredoxin) subunit LctB
D CLJU_c17820 predicted aldo/keto reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D CLJU_c25140 conserved hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CLJU_c33690 putative Zn-dependent hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CLJU_c05640 predicted hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CLJU_c15560 conserved hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D CLJU_c04620 conserved hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D CLJU_c21600 conserved hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D CLJU_c04160 maeB; NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CLJU_c25360 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CLJU_c30500 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CLJU_c38460 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CLJU_c37390 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CLJU_c40600 fumA; fumarate hydratase, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CLJU_c40590 fumB; fumarate hydratase, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CLJU_c06210 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CLJU_c08140 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CLJU_c23630 predicted acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLJU_c09050 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D CLJU_c04970 nivfV; homocitrate synthase, omega subunit K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
D CLJU_c04980 nifV; homocitrate synthase, alpha subunit K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:clj00630]
D CLJU_c06620 aconitate hydratase/aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CLJU_c24200 aconitate hydratase/aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CLJU_c30460 aconitate hydratase/aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CLJU_c23630 predicted acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLJU_c40620 mutE; methylaspartate mutase, subunit E K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D CLJU_c40640 mutS4; glutamate mutase K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D CLJU_c40610 beta-methylaspartase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2]
D CLJU_c23190 predicted FAD/FMN-containing dehydrogenase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D CLJU_c13900 predicted FAD/FMN-containing dehydrogenase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D CLJU_c20350 predicted FAD/FMN-containing dehydrogenase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D CLJU_c05910 predicted FAD/FMN-containing dehydrogenase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D CLJU_c33430 D-isomer specific 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D CLJU_c19280 hypothetical protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D CLJU_c04250 predicted phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CLJU_c17780 putative phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CLJU_c17370 gltB; glutamate synthase, large subunit K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D CLJU_c41950 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLJU_c11500 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CLJU_c24160 gcvPA; glycine dehydrogenase, subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D CLJU_c24150 gcvPB; glycine dehydrogenase, subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D CLJU_c24180 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CLJU_c37600 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJU_c24170 gcvH1; predicted glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CLJU_c37540 gcvH2; predicted glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CLJU_c00680 predicted hydroxyacid dehydrogenase/reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D CLJU_c28090 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D CLJU_c28110 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CLJU_c38380 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CLJU_c13610 putative KDPG and KHG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CLJU_c11630 2-keto-3-deoxy-6-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:clj00640]
D CLJU_c12780 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CLJU_c12770 pta; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLJU_c37600 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJU_c42100 accA; acetyl-coenzyme A carboxylase, subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CLJU_c42140 predicted biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CLJU_c42120 accC2; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CLJU_c42110 accD; acetyl-coenzyme A carboxylase, subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CLJU_c20470 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CLJU_c35920 predicted aminotransferase K25571 pydD; beta-alanine---2-oxoglutarate transaminase [EC:2.6.1.120]
D CLJU_c07300 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D CLJU_c26570 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D CLJU_c17820 predicted aldo/keto reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
C 00650 Butanoate metabolism [PATH:clj00650]
D CLJU_c23630 predicted acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLJU_c11960 predicted acetaldehyde dehydrogenase K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D CLJU_c39730 predicted acetaldehyde dehydrogenase K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D CLJU_c16510 adhE1; bifunctional aldehyde/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLJU_c16520 adhE2; bifunctional aldehyde/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLJU_c22800 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CLJU_c20470 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CLJU_c38930 4hbD; NAD-dependent 4-hydroxybutyrate dehydrogenase K18120 4hbD; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61]
D CLJU_c09340 pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLJU_c29340 pyruvate:ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLJU_c24860 zinc-containing alcohol dehydrogenase K23259 adh; isopropanol dehydrogenase (NADP+) [EC:1.1.1.80]
D CLJU_c23420 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLJU_c20420 ilvI; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLJU_c38920 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLJU_c20430 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CLJU_c08380 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D CLJU_c25810 zinc-containing alcohol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
D CLJU_c25840 zinc-containing alcohol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
D CLJU_c23220 predicted zinc-containing alcohol dehydrogenase superfamily K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism [PATH:clj00660]
D CLJU_c23420 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLJU_c20420 ilvI; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLJU_c38920 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLJU_c20430 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CLJU_c08380 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D CLJU_c40610 beta-methylaspartase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2]
D CLJU_c40620 mutE; methylaspartate mutase, subunit E K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D CLJU_c40640 mutS4; glutamate mutase K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D CLJU_c09060 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CLJU_c09070 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CLJU_c09080 leuB1; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CLJU_c39500 leuB2; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:clj00562]
D CLJU_c22020 zinc dependent phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CLJU_c26040 putative dehydrogenase K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D CLJU_c39130 tim; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:clj00190]
D CLJU_c14720 NADH dehydrogenase, 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D CLJU_c14710 NADH dehydrogenase K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D CLJU_c08680 hypothetical protein K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D CLJU_c14700 iron only hydrogenase K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D CLJU_c07050 NADH dehydrogenase related protein K05588 hoxU; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D CLJU_c22800 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CLJU_c02410 atpA; F1Fo ATPase, subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CLJU_c02430 atpD; F1Fo ATPase, subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CLJU_c02420 atpG; F1Fo ATPase, subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CLJU_c02400 atpH; F1Fo ATPase, subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CLJU_c02440 atpC; F1Fo ATPase, subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CLJU_c02370 atpB; F1Fo ATPase, subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CLJU_c02390 atpF; F1Fo ATPase, subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CLJU_c02380 atpE; F1F0 ATPase, subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CLJU_c10470 ppaC; manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:clj00680]
D CLJU_c19540 zinc-containing alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CLJU_c08690 putative oxidoreductase with a 2Fe-2S iron-sulfur cluster domain K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10]
D CLJU_c06990 formate dehydrogenase, alpha subunit K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D CLJU_c08930 predicted formate dehydrogenase H K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D CLJU_c17280 Fe-Fe hydrogenase 2 K25123 hydA2; iron hydrogenase HydA2 [EC:1.12.7.-]
D CLJU_c07070 Fe-Fe hydrogenase 2 K25123 hydA2; iron hydrogenase HydA2 [EC:1.12.7.-]
D CLJU_c17270 predicted electron transport protein K25124 hycB; FeS-containing electron transfer protein
D CLJU_c07080 hycB; predicted Fe-S-cluster-containing hydrogenase components 2 K25124 hycB; FeS-containing electron transfer protein
D CLJU_c20030 Fe-S-cluster-containing hydrogenase component K25124 hycB; FeS-containing electron transfer protein
D CLJU_c07060 putative 4Fe-4S ferredoxin K25124 hycB; FeS-containing electron transfer protein
D CLJU_c37570 CO dehydrogenase/acetyl-CoA synthase gamma subunit K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D CLJU_c37580 CO dehydrogenase/acetyl-CoA synthase, delta subunit K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245]
D CLJU_c09110 cooS1; anaerobic-type carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CLJU_c17910 cooS2; carbon monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CLJU_c37670 codH; carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CLJU_c22510 iron-sulfur cluster binding protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CLJU_c09100 anaerobic-type carbon monoxide dehydrogenase, electron transfer subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CLJU_c23720 predicted nitrate reductase electron transfer subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CLJU_c11500 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CLJU_c33430 D-isomer specific 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D CLJU_c19280 hypothetical protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D CLJU_c39110 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLJU_c00660 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLJU_c02810 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLJU_c29050 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CLJU_c03250 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJU_c25790 pfk1; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJU_c38060 formylmethanofuran dehydrogenase, subunit E K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12]
D CLJU_c09000 formylmethanofuran dehydrogenase, subunit E K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12]
D CLJU_c12780 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CLJU_c12770 pta; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLJU_c39120 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CLJU_c00970 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJU_c11580 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJU_c34760 predicted phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJU_c32780 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJU_c30610 predicted D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJU_c19110 predicted cobalamin B12-binding protein K16179 mtbC; dimethylamine corrinoid protein
D CLJU_c20560 putative corrinoid protein K16179 mtbC; dimethylamine corrinoid protein
D CLJU_c21080 predicted cobalamin B12-binding protein K16179 mtbC; dimethylamine corrinoid protein
D CLJU_c41880 comB; 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
D CLJU_c05920 mdh; malate dehydrogenase K05884 comC; L-2-hydroxycarboxylate dehydrogenase (NAD+) [EC:1.1.1.337]
C 00910 Nitrogen metabolism [PATH:clj00910]
D CLJU_c23740 predicted permease K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D CLJU_c04930 nifD1; nitrogenase molybdenum-iron protein, alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLJU_c23520 nifD2; nitrogenase molybdenum-iron protein, alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLJU_c04940 nifK1; nitrogenase molybdenum-iron protein, beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLJU_c23510 nifK2; nitrogenase molybdenum-iron protein, beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLJU_c04900 nifH1; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLJU_c23050 nifH2; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLJU_c23120 nifH3; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLJU_c23530 nifH4; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLJU_c27260 predicted hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D CLJU_c07730 hcp; predicted hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D CLJU_c42210 conserved hypothetical protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CLJU_c02660 gdh; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CLJU_c41950 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLJU_c24190 NADPH-dependent glutamate synthase beta chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLJU_c17380 gltD; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLJU_c37240 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLJU_c17370 gltB; glutamate synthase, large subunit K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D CLJU_c14770 putative C-terminal domain of the cyanate lyase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D CLJU_c09300 arcC1; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLJU_c23800 arcC2; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLJU_c23570 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLJU_c28000 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLJU_c15300 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLJU_c42550 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:clj00920]
D CLJU_c18330 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CLJU_c18310 predicted ABC nitrate/sulfonate/bicarbonate family transporter, permease component K15554 ssuC; sulfonate transport system permease protein
D CLJU_c18320 predicted ABC nitrate/sulfonate/bicarbonate family transporter, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CLJU_c13170 putative phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D CLJU_c25470 asrA2; anaerobic sulfite reductase subunit A K16950 asrA; anaerobic sulfite reductase subunit A
D CLJU_c23770 asrA1; anaerobic sulfite reductase subunit A K16950 asrA; anaerobic sulfite reductase subunit A
D CLJU_c25480 asrB2; anaerobic sulfite reductase subunit B K16951 asrB; anaerobic sulfite reductase subunit B
D CLJU_c23760 asrB1; anaerobic sulfite reductase subunit B K16951 asrB; anaerobic sulfite reductase subunit B
D CLJU_c23750 asrC; anaerobic sulfite reductase subunit C K00385 asrC; anaerobic sulfite reductase subunit C
D CLJU_c39300 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CLJU_c39310 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLJU_c24370 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLJU_c08270 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLJU_c24330 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:clj00061]
D CLJU_c42100 accA; acetyl-coenzyme A carboxylase, subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CLJU_c42140 predicted biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CLJU_c42120 accC2; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CLJU_c42110 accD; acetyl-coenzyme A carboxylase, subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CLJU_c12820 putative acyl carrier protein K02078 acpP; acyl carrier protein
D CLJU_c42170 fabD; malonyl-CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CLJU_c42190 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CLJU_c42150 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CLJU_c34940 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLJU_c29220 predicted short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLJU_c42160 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLJU_c42130 fabZ; predicted hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CLJU_c42180 fabI; enoyl-[acyl-carrier protein] reductase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:clj00071]
D CLJU_c23630 predicted acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLJU_c19540 zinc-containing alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CLJU_c16510 adhE1; bifunctional aldehyde/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLJU_c16520 adhE2; bifunctional aldehyde/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:clj00561]
D CLJU_c28110 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CLJU_c38380 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CLJU_c26570 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D CLJU_c12810 plsX; predicted fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CLJU_c06600 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLJU_c39280 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLJU_c08090 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CLJU_c19690 predicted glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D CLJU_c02160 murG1; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CLJU_c15830 putative monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CLJU_c25080 putative sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D CLJU_c08770 predicted alkaline phosphatase superfamily enzyme K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00564 Glycerophospholipid metabolism [PATH:clj00564]
D CLJU_c12480 glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CLJU_c37480 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CLJU_c06600 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLJU_c39280 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLJU_c08090 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CLJU_c22020 zinc dependent phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CLJU_c21800 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CLJU_c13070 predicted nucleotidyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CLJU_c02910 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CLJU_c00710 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CLJU_c34880 putative CDP-alcohol phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CLJU_c13270 pgsA; CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CLJU_c08890 cls1; predicted cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D CLJU_c29040 cls2; predicted cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D CLJU_c25730 conserved hypothetical protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
D CLJU_c22020 zinc dependent phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D CLJU_c29650 putative esterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D CLJU_c08530 putative lysophospholipase (TesA-like) K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:clj00230]
D CLJU_c32050 predicted hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CLJU_c11240 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CLJU_c18150 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D CLJU_c34210 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLJU_c41770 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CLJU_c08560 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CLJU_c08600 purD; phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CLJU_c08580 purN; folate-dependent phosphoribosylglycinamide formyltransferase PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CLJU_c11540 purL; bifunctional enzyme phosphoribosylformylglycinamidine (FGAM) synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D CLJU_c08570 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CLJU_c08540 purE; phosphoribosylaminoimidazole carboxylase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CLJU_c08550 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CLJU_c13370 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CLJU_c08590 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CLJU_c22210 bifunctional AICARFT/IMPCHase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CLJU_c33720 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CLJU_c34740 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CLJU_c20750 punA; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CLJU_c12360 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CLJU_c33920 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CLJU_c41540 hpt; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CLJU_c37180 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CLJU_c36850 putative xanthosine triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CLJU_c15120 putative xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D CLJU_c23610 coxM; aerobic-type CO dehydrogenase, middle subunit K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4]
D CLJU_c29920 putative xanthine dehydrogenase subunit, FAD-binding domain K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4]
D CLJU_c23880 putative xanthine dehydrogenase subunit, FAD-binding domain K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4]
D CLJU_c37170 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CLJU_c23960 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D CLJU_c12520 gpk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CLJU_c06840 predicted ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CLJU_c01840 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CLJU_c04120 putative deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D CLJU_c33710 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CLJU_c02740 predicted GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D CLJU_c30620 conserved hypothetical protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D CLJU_c19960 conserved protein with RelA/SpoT domain K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D CLJU_c02800 putative adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D CLJU_c42350 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CLJU_c28280 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D CLJU_c26120 adeC; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D CLJU_c23940 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D CLJU_c29900 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D CLJU_c40830 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CLJU_c17140 nucleotide kinase related protein K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D CLJU_c15330 allantoinase K01466 allB; allantoinase [EC:3.5.2.5]
D CLJU_c15340 dihydroorotase K01466 allB; allantoinase [EC:3.5.2.5]
D CLJU_c15280 amaB1; N-carbamoyl-L-amino acid hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D CLJU_c15270 conserved hypothetical protein K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D CLJU_c09300 arcC1; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLJU_c23800 arcC2; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLJU_c23570 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLJU_c28000 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLJU_c15300 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLJU_c42550 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:clj00240]
D CLJU_c04410 carB1; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLJU_c25210 carB2; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLJU_c04400 carA1; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CLJU_c25220 carA2; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CLJU_c35730 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CLJU_c15290 predicted aspartate/ornithine carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CLJU_c35720 pyrI; aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D CLJU_c34790 predicted amidohydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CLJU_c37290 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CLJU_c35690 pyrD; dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D CLJU_c35700 pyrK; dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D CLJU_c35680 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CLJU_c35710 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CLJU_c13040 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CLJU_c07200 predicted Maf protein ortholog K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CLJU_c02200 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CLJU_c21330 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CLJU_c02840 Conserved hypothetical protein containing an uridine kinase domain K00876 udk; uridine kinase [EC:2.7.1.48]
D CLJU_c34740 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CLJU_c02320 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CLJU_c10740 pyrR; predicted PyrR bifunctional protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CLJU_c18160 pdp; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D CLJU_c18120 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CLJU_c19230 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D CLJU_c01840 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CLJU_c06840 predicted ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CLJU_c02330 cytidine deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CLJU_c01390 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CLJU_c10140 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CLJU_c35870 dihydropyrimidine dehydrogenase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D CLJU_c23790 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLJU_c35890 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLJU_c35910 amaB2; N-carbamoyl-L-amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:clj00250]
D CLJU_c21290 aspC2; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c13340 aspC1; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c04650 putative aromatic amino acid aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c24420 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CLJU_c05460 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CLJU_c26720 asnB; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CLJU_c17710 asn; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CLJU_c21390 predicted hydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D CLJU_c33270 predicted transferase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D CLJU_c04170 aspA1; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D CLJU_c42370 aspA2; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D CLJU_c06700 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CLJU_c06710 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CLJU_c42350 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CLJU_c13370 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CLJU_c35730 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CLJU_c15290 predicted aspartate/ornithine carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CLJU_c35720 pyrI; aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D CLJU_c20470 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CLJU_c24190 NADPH-dependent glutamate synthase beta chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLJU_c17380 gltD; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLJU_c37240 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLJU_c02660 gdh; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CLJU_c41950 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLJU_c04410 carB1; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLJU_c25210 carB2; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLJU_c04400 carA1; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CLJU_c25220 carA2; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CLJU_c40420 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CLJU_c08560 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:clj00260]
D CLJU_c32890 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLJU_c38320 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLJU_c34570 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLJU_c07150 hom1; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLJU_c10090 hom2; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLJU_c07160 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CLJU_c33180 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CLJU_c40360 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CLJU_c26170 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D CLJU_c11500 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CLJU_c33430 D-isomer specific 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D CLJU_c19280 hypothetical protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D CLJU_c28110 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CLJU_c38380 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CLJU_c39120 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CLJU_c00970 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJU_c11580 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJU_c34760 predicted phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJU_c32780 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJU_c30610 predicted D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJU_c24160 gcvPA; glycine dehydrogenase, subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D CLJU_c24150 gcvPB; glycine dehydrogenase, subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D CLJU_c24180 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CLJU_c37600 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJU_c24170 gcvH1; predicted glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CLJU_c37540 gcvH2; predicted glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CLJU_c02910 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CLJU_c33250 sdhA; L-serine dehydratase, alpha chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLJU_c33260 sdhB; L-serine dehydratase, beta chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLJU_c15090 ilvE2; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CLJU_c29440 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CLJU_c16130 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CLJU_c16120 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:clj00270]
D CLJU_c39300 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CLJU_c39310 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLJU_c24370 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLJU_c08270 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLJU_c24380 metB; cystathione gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLJU_c27610 predicted bifunctional cystathionine gamma-lyase/maltose regulon repressor K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLJU_c06650 metH1; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CLJU_c02580 metK1; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CLJU_c23550 metK2; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CLJU_c21310 speH; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CLJU_c28200 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CLJU_c10700 predicted nucleoside phosphorylase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CLJU_c12360 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CLJU_c26110 predicted amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D CLJU_c23480 luxS; S-Ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CLJU_c32890 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLJU_c38320 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLJU_c34570 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLJU_c07150 hom1; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLJU_c10090 hom2; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLJU_c24330 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CLJU_c06640 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CLJU_c09370 ilvE1; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLJU_c08740 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLJU_c21290 aspC2; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c13340 aspC1; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c04650 putative aromatic amino acid aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c33270 predicted transferase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D CLJU_c29440 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CLJU_c33250 sdhA; L-serine dehydratase, alpha chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLJU_c33260 sdhB; L-serine dehydratase, beta chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLJU_c00970 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJU_c11580 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJU_c34760 predicted phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJU_c32780 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJU_c30610 predicted D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:clj00280]
D CLJU_c09370 ilvE1; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLJU_c08740 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLJU_c37600 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJU_c20470 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CLJU_c23630 predicted acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:clj00290]
D CLJU_c15090 ilvE2; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CLJU_c09060 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CLJU_c09070 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CLJU_c09080 leuB1; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CLJU_c39500 leuB2; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CLJU_c23420 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLJU_c20420 ilvI; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLJU_c38920 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLJU_c20430 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CLJU_c20390 ilvC2; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CLJU_c20400 ilvC3; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CLJU_c15310 ilvC1; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CLJU_c20410 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CLJU_c09370 ilvE1; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLJU_c08740 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLJU_c09050 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:clj00300]
D CLJU_c07150 hom1; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLJU_c10090 hom2; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLJU_c32890 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLJU_c38320 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLJU_c34570 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLJU_c03840 predicted dihydrodipicolinate synthese family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLJU_c04300 dapA1; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLJU_c34560 dapA2; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLJU_c34550 dapB2; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CLJU_c18050 dapB1; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CLJU_c21510 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CLJU_c17390 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CLJU_c10760 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CLJU_c14280 predicted aromatic animotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CLJU_c38310 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CLJU_c34610 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D CLJU_c29430 predicted transcriptional regulator containing an aminotransferase domain K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D CLJU_c19590 predicted transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D CLJU_c21270 predicted Aminotransferase, class I and II family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D CLJU_c10570 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CLJU_c10580 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:clj00310]
D CLJU_c37600 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJU_c23630 predicted acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLJU_c29440 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CLJU_c20470 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
C 00220 Arginine biosynthesis [PATH:clj00220]
D CLJU_c09280 argF1; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CLJU_c28010 argF3; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CLJU_c25230 argF2; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CLJU_c06700 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CLJU_c06710 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CLJU_c21930 arginase K01476 rocF; arginase [EC:3.5.3.1]
D CLJU_c20480 allophanate hydrolase subunit 1 K01941 uca; urea carboxylase [EC:6.3.4.6]
D CLJU_c09270 arcA; arginine deiminase ArcA K01478 arcA; arginine deiminase [EC:3.5.3.6]
D CLJU_c41950 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLJU_c04410 carB1; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLJU_c25210 carB2; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLJU_c04400 carA1; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CLJU_c25220 carA2; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CLJU_c09300 arcC1; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLJU_c23800 arcC2; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLJU_c23570 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLJU_c28000 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLJU_c15300 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLJU_c42550 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLJU_c02660 gdh; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CLJU_c21290 aspC2; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c13340 aspC1; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c04650 putative aromatic amino acid aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c21530 argJ; arginine biosynthesis bifunctional protein K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D CLJU_c21520 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CLJU_c21540 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CLJU_c21510 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:clj00330]
D CLJU_c19230 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D CLJU_c34220 predicted arginine/lysine/ornithine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D CLJU_c42490 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D CLJU_c28200 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CLJU_c21310 speH; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CLJU_c21930 arginase K01476 rocF; arginase [EC:3.5.3.1]
D CLJU_c37380 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CLJU_c05990 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CLJU_c06000 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CLJU_c21290 aspC2; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c13340 aspC1; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c04650 putative aromatic amino acid aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:clj00340]
D CLJU_c11670 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CLJU_c11660 hisZ; ATP phosphoribosyltransferase, regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D CLJU_c11750 hisE; phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D CLJU_c11740 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D CLJU_c11710 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CLJU_c11700 hisH; imidazole glycerol phosphate synthase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CLJU_c11730 hisF; imidazole glycerol phosphate synthase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CLJU_c11690 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D CLJU_c11720 histidinol-phosphate aminotransferase protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLJU_c11810 hisK; histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D CLJU_c11680 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D CLJU_c32840 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D CLJU_c21460 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D CLJU_c21480 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D CLJU_c21470 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D CLJU_c21420 formiminoglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D CLJU_c21500 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
C 00350 Tyrosine metabolism [PATH:clj00350]
D CLJU_c21290 aspC2; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c13340 aspC1; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c04650 putative aromatic amino acid aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c11720 histidinol-phosphate aminotransferase protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLJU_c19540 zinc-containing alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CLJU_c16510 adhE1; bifunctional aldehyde/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLJU_c16520 adhE2; bifunctional aldehyde/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLJU_c16150 predicted Zn-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D CLJU_c38580 predicted Zn-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00360 Phenylalanine metabolism [PATH:clj00360]
D CLJU_c21290 aspC2; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c13340 aspC1; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c04650 putative aromatic amino acid aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c11720 histidinol-phosphate aminotransferase protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLJU_c16150 predicted Zn-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D CLJU_c38580 predicted Zn-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D CLJU_c33480 enoate reductase K10797 enr; 2-enoate reductase [EC:1.3.1.31]
D CLJU_c29840 enoate reductase K10797 enr; 2-enoate reductase [EC:1.3.1.31]
C 00380 Tryptophan metabolism [PATH:clj00380]
D CLJU_c37600 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJU_c23630 predicted acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:clj00400]
D CLJU_c14780 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CLJU_c29180 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CLJU_c29160 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CLJU_c28760 aroD; 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D CLJU_c29110 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CLJU_c29150 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CLJU_c29140 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CLJU_c16070 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CLJU_c16080 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CLJU_c16090 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D CLJU_c16110 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D CLJU_c16100 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CLJU_c16130 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CLJU_c16120 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CLJU_c29130 pheA2; bifunctional chorismate mutase/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D CLJU_c07140 pheB; predicted phenylalanine biosynthesis protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D CLJU_c29170 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CLJU_c25500 pheA1; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D CLJU_c21290 aspC2; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c13340 aspC1; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c04650 putative aromatic amino acid aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c11720 histidinol-phosphate aminotransferase protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:clj00410]
D CLJU_c20470 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CLJU_c35920 predicted aminotransferase K25571 pydD; beta-alanine---2-oxoglutarate transaminase [EC:2.6.1.120]
D CLJU_c35870 dihydropyrimidine dehydrogenase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D CLJU_c23790 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLJU_c35890 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLJU_c35910 amaB2; N-carbamoyl-L-amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00430 Taurine and hypotaurine metabolism [PATH:clj00430]
D CLJU_c19030 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CLJU_c12770 pta; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLJU_c12780 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:clj00450]
D CLJU_c24380 metB; cystathione gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLJU_c27610 predicted bifunctional cystathionine gamma-lyase/maltose regulon repressor K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLJU_c06650 metH1; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CLJU_c27330 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CLJU_c27810 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CLJU_c40490 trxR; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CLJU_c23830 predicted oxidoreductase, Fe-S subunit K12527 ygfK; putative selenate reductase [EC:1.97.1.9]
D CLJU_c07460 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CLJU_c27720 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CLJU_c07470 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CLJU_c27710 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CLJU_c01730 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:clj00460]
D CLJU_c19030 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CLJU_c11500 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:clj00470]
D CLJU_c32120 alr2; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLJU_c12010 alr1; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLJU_c40390 alr3; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLJU_c32110 ddl; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLJU_c29440 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D CLJU_c41940 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CLJU_c41450 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CLJU_c16410 predicted mandelate racemase/muconate lactonizing enzyme family protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D CLJU_c10760 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CLJU_c38310 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:clj00480]
D CLJU_c19030 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CLJU_c20510 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D CLJU_c20490 allophanate hydrolase subunit 2 K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D CLJU_c11590 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CLJU_c28200 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
D CLJU_c01670 putative cell wall hydrolase K23989 lytD; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:3.2.1.96]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:clj00542]
D CLJU_c02340 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:clj00541]
D CLJU_c04510 galU1; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLJU_c34190 galU2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLJU_c21710 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLJU_c33530 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CLJU_c05330 rfbA1; dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLJU_c05560 rfbA2; dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLJU_c05320 rfbB1; dTDP glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLJU_c05550 rfbB2; dTDP glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLJU_c05350 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLJU_c05580 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLJU_c37840 dTDP-4-dehydrorhamnose 3,5 epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLJU_c05340 rfbD1; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CLJU_c05570 rfbD2; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CLJU_c39450 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CLJU_c05310 bifunctional enzyme mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CLJU_c05540 bifunctional enzyme mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CLJU_c01930 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLJU_c41780 gcaD; bifunctional protein GcaD K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CLJU_c02350 epsC; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CLJU_c05480 predicted polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D CLJU_c05510 predicted polysaccharide biosynthesis protein K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D CLJU_c34100 predicted UDP-N-acetyl-D-mannosamine 6-dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D CLJU_c34090 lipopolysaccharide biosynthesis protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D CLJU_c26790 predicted pleiotropic regulatory protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D CLJU_c34080 predicted UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D CLJU_c34070 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
C 00550 Peptidoglycan biosynthesis [PATH:clj00550]
D CLJU_c02460 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLJU_c41980 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLJU_c03180 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CLJU_c41810 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CLJU_c41450 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CLJU_c10570 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CLJU_c32110 ddl; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLJU_c10580 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CLJU_c13060 uppS1; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLJU_c35470 uppS2; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLJU_c06220 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJU_c15920 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJU_c15960 putative phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJU_c15820 predicted phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJU_c32240 putative phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJU_c10590 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLJU_c09330 murG2; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 2 K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CLJU_c33940 predicted bifunctional transglycosylase/transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLJU_c15910 predicted multimodular transpeptidase-transglycosylase K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D CLJU_c07250 predicted penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CLJU_c20280 predicted penicillin binding protein, transpeptidase domain K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CLJU_c10560 ftsI1; predicted cell division protein K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CLJU_c38810 ftsI2; predicted cell division protein K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CLJU_c03150 predicted peptidoglycan synthetase K05364 pbpA; penicillin-binding protein A
D CLJU_c14360 D-alanyl-D-alanine carboxypeptidase precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLJU_c11270 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLJU_c11330 D-alanyl-D-alanine carboxypeptidase related protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLJU_c07440 dacA1; D-alanyl-D-alanine carboxypeptidase precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLJU_c15720 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJU_c06200 predicted UDP-N-acetylmuramyl tripeptide synthetase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D CLJU_c06190 putative cobyric acid synthase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:clj00552]
D CLJU_c06220 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJU_c15920 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJU_c15960 putative phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJU_c15820 predicted phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJU_c32240 putative phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJU_c02340 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CLJU_c34010 predicted UDP-N-acetyl-D-mannosaminuronic acid transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D CLJU_c02160 murG1; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CLJU_c15830 putative monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CLJU_c25080 putative sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D CLJU_c08770 predicted alkaline phosphatase superfamily enzyme K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D CLJU_c19690 predicted glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D CLJU_c19670 predicted glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:clj00543]
D CLJU_c02340 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CLJU_c04000 Glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D CLJU_c39300 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:clj00730]
D CLJU_c33040 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CLJU_c14540 nifS1; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJU_c23390 nifS2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJU_c28360 nifS3; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJU_c12110 homocysteine desulfhydrase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJU_c28350 thiI; predicted thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D CLJU_c11160 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CLJU_c30580 hypothetical protein K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59]
D CLJU_c33050 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CLJU_c35060 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CLJU_c33060 thiE2; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CLJU_c13440 thiE1; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CLJU_c17140 nucleotide kinase related protein K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D CLJU_c12630 predicted GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CLJU_c12650 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D CLJU_c40830 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CLJU_c25410 predicted transcriptional regulator of extracellular enzyme genes K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:clj00740]
D CLJU_c22070 ribAB; riboflavin biosynthesis protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CLJU_c22090 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CLJU_c22060 ribH; riboflavin synthase beta chain K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CLJU_c22080 ribE; riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CLJU_c13190 ribF; bifunctional enzyme FAD synthetase/riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CLJU_c33050 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CLJU_c35060 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CLJU_c32050 predicted hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CLJU_c11240 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:clj00750]
D CLJU_c32260 putative general stress protein 26 related protein K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D CLJU_c33180 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CLJU_c40360 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CLJU_c39580 pdxS; pyridoxal biosynthesis protein PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D CLJU_c39590 pdxT; glutamine amidotransferase, subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:clj00760]
D CLJU_c24420 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CLJU_c24430 nadA; predicted quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D CLJU_c24410 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CLJU_c13430 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CLJU_c20750 punA; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CLJU_c34740 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CLJU_c07400 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CLJU_c00910 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D CLJU_c19510 putative pyrophosphohydrolase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D CLJU_c06920 nadE; glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D CLJU_c23150 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D CLJU_c01320 npdA; NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CLJU_c11180 ppnK; nicotinamide adenine dinucleotide kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:clj00770]
D CLJU_c23420 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLJU_c20420 ilvI; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLJU_c38920 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLJU_c20430 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CLJU_c20390 ilvC2; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CLJU_c20400 ilvC3; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CLJU_c15310 ilvC1; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CLJU_c20410 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CLJU_c08720 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CLJU_c20360 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CLJU_c17690 panE; ketopantoate reductase, PanE/ApbA K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CLJU_c41520 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CLJU_c12540 coaBC; phosphopantothenoylcysteine synthase/decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CLJU_c12720 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CLJU_c33600 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CLJU_c03000 acpS; phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CLJU_c09370 ilvE1; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLJU_c08740 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLJU_c35870 dihydropyrimidine dehydrogenase K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D CLJU_c23790 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLJU_c35890 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLJU_c35910 amaB2; N-carbamoyl-L-amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00780 Biotin metabolism [PATH:clj00780]
D CLJU_c42150 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CLJU_c34940 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLJU_c29220 predicted short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLJU_c42160 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLJU_c42130 fabZ; predicted hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CLJU_c22770 radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6]
D CLJU_c38330 putative biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CLJU_c26660 bifunctional protein: biotin operon repressor/biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:clj00785]
D CLJU_c33210 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CLJU_c09210 putative lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D CLJU_c33220 lplA; predicted lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D CLJU_c37600 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJU_c24160 gcvPA; glycine dehydrogenase, subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D CLJU_c24150 gcvPB; glycine dehydrogenase, subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D CLJU_c24180 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CLJU_c24170 gcvH1; predicted glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CLJU_c37540 gcvH2; predicted glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:clj00790]
D CLJU_c06350 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CLJU_c24630 putative hydrolase, NUDIX family K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D CLJU_c06370 bifunctional folate synthesis protein K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3]
D CLJU_c06340 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CLJU_c24490 dfrD; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CLJU_c34680 folC; folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CLJU_c22070 ribAB; riboflavin biosynthesis protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CLJU_c36020 para-aminobenzoate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D CLJU_c36010 para-aminobenzoate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D CLJU_c36000 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D CLJU_c04020 6-pyruvoyl-tetrahydropterin synthase related protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CLJU_c34950 predicted metal-dependent hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D CLJU_c33380 predicted molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CLJU_c25050 predicted molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CLJU_c25060 predicted molybdenum cofactor biosynthesis protein B K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CLJU_c07000 moeA; molybdenum cofactor biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CLJU_c20170 predicted molybdenum cofactor biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CLJU_c20180 predicted molybdenum cofactor biosynthesis protein with a molybdate-binding domain K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CLJU_c17110 predicted molybdenum cofactor biosynthesis enzyme K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CLJU_c23990 putative metal dependent phosphohydrolase K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D CLJU_c21410 putative molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:clj00670]
D CLJU_c24490 dfrD; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CLJU_c37650 fhs; formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CLJU_c37630 folD; bifunctional protein: methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CLJU_c21440 formiminotransferase-cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D CLJU_c37640 fchA; formyltetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D CLJU_c11500 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CLJU_c08580 purN; folate-dependent phosphoribosylglycinamide formyltransferase PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CLJU_c08590 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CLJU_c22210 bifunctional AICARFT/IMPCHase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CLJU_c21500 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D CLJU_c12570 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CLJU_c24180 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CLJU_c06650 metH1; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CLJU_c37610 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CLJU_c21900 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:clj00860]
D CLJU_c13390 gluS; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CLJU_c04480 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CLJU_c04490 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CLJU_c31960 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CLJU_c31980 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CLJU_c19100 hemE; Uroporphyrinogen decarboxylase (URU-D) K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CLJU_c21070 putative Uroporphyrinogen decarboxylase/methylcobalamin:coenzyme M methyltransferase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CLJU_c21110 predicted uroporphyrinogen-III decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CLJU_c31970 hemD; porphyrin biosynthesis protein HemD K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D CLJU_c31990 sirC; precorrin-2 dehydrogenase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D CLJU_c31850 cbiK; sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D CLJU_c31890 cbiL; cobalt-precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D CLJU_c31860 cbiH; cobalt-precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D CLJU_c31880 cbiF; cobalt-precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D CLJU_c31870 cbiG; cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D CLJU_c31840 cbiJ; cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D CLJU_c31920 cbiD; predicted cobalt-precorrin-6A synthase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D CLJU_c31900 cbiT; predicted cobalt-precorrin-6Y C(15)-methyltransferase K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D CLJU_c31910 cbiE; cobalt-precorrin-6Y C(5)-methyltransferase K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D CLJU_c31930 cbiC; cobalt-precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D CLJU_c31950 cbiA; cobyrinic acid A,C-diamide synthase CbiA K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D CLJU_c31820 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CLJU_c32020 cobQ; cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D CLJU_c32010 cobD2; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D CLJU_c35520 cobU; bifunctional adenosylcobalamin biosynthesis protein CobU K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D CLJU_c35530 cobS; predicted cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D CLJU_c31940 cobT; nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D CLJU_c23980 fructose-2,6-bisphosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D CLJU_c35540 cobC; alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D CLJU_c31830 PduX-related protein K16651 pduX; L-threonine kinase [EC:2.7.1.177]
D CLJU_c32000 cobD1; threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D CLJU_c19700 putative ferretin-like protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:clj00130]
D CLJU_c40300 ubiE; putative ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CLJU_c40280 putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:clj00900]
D CLJU_c11160 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CLJU_c13080 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CLJU_c41280 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CLJU_c02110 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CLJU_c01570 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CLJU_c13100 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CLJU_c21320 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945 RP-S1; small subunit ribosomal protein S1
D CLJU_c23630 predicted acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLJU_c11150 fps; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CLJU_c40310 predicted polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CLJU_c13060 uppS1; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLJU_c35470 uppS2; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CLJU_c03050 tktA1; transketolase, subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLJU_c03060 tktB1; transketolase, subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLJU_c25820 tktB2; transketolase, subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLJU_c25830 tktA2; transketolase, subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:clj00523]
D CLJU_c05330 rfbA1; dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLJU_c05560 rfbA2; dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLJU_c05320 rfbB1; dTDP glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLJU_c05550 rfbB2; dTDP glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLJU_c05350 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLJU_c05580 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLJU_c37840 dTDP-4-dehydrorhamnose 3,5 epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLJU_c05340 rfbD1; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CLJU_c05570 rfbD2; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:clj01055]
D CLJU_c34360 predicted FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D CLJU_c05320 rfbB1; dTDP glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLJU_c05550 rfbB2; dTDP glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:clj00946]
D CLJU_c30220 multimeric flavodoxin WrbA-like protein K26176 flr; flavone/flavonol reductase
D CLJU_c38590 enoate reductase K26178 fcr; flavanone/flavanol-cleaving reductase
D CLJU_c16160 enoate reductase K26178 fcr; flavanone/flavanol-cleaving reductase
D CLJU_c30240 predicted phloretin hydrolase K22906 phy; phloretin hydrolase [EC:3.7.1.4]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D CLJU_c16430 putative beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:clj00332]
D CLJU_c05990 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CLJU_c06000 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:clj00261]
D CLJU_c34360 predicted FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D CLJU_c32890 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLJU_c38320 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLJU_c34570 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLJU_c03840 predicted dihydrodipicolinate synthese family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLJU_c04300 dapA1; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLJU_c34560 dapA2; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLJU_c34550 dapB2; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CLJU_c18050 dapB1; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:clj00521]
D CLJU_c20810 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLJU_c34210 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLJU_c05330 rfbA1; dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLJU_c05560 rfbA2; dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLJU_c05320 rfbB1; dTDP glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLJU_c05550 rfbB2; dTDP glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLJU_c05350 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLJU_c05580 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLJU_c37840 dTDP-4-dehydrorhamnose 3,5 epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLJU_c05340 rfbD1; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CLJU_c05570 rfbD2; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CLJU_c20810 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:clj00525]
D CLJU_c05330 rfbA1; dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLJU_c05560 rfbA2; dTDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLJU_c05320 rfbB1; dTDP glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLJU_c05550 rfbB2; dTDP glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:clj00401]
D CLJU_c29170 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CLJU_c21290 aspC2; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c13340 aspC1; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c04650 putative aromatic amino acid aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c11720 histidinol-phosphate aminotransferase protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CLJU_c16070 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CLJU_c16080 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D CLJU_c42170 fabD; malonyl-CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CLJU_c34940 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLJU_c29220 predicted short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLJU_c42160 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CLJU_c12820 putative acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D CLJU_c02580 metK1; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CLJU_c23550 metK2; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:clj00362]
D CLJU_c25650 carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D CLJU_c36030 cmd; carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D CLJU_c23630 predicted acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:clj00625]
D CLJU_c19540 zinc-containing alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CLJU_c16510 adhE1; bifunctional aldehyde/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLJU_c16520 adhE2; bifunctional aldehyde/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLJU_c04940 nifK1; nitrogenase molybdenum-iron protein, beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLJU_c23510 nifK2; nitrogenase molybdenum-iron protein, beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLJU_c04900 nifH1; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLJU_c23050 nifH2; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLJU_c23120 nifH3; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLJU_c23530 nifH4; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLJU_c04930 nifD1; nitrogenase molybdenum-iron protein, alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLJU_c23520 nifD2; nitrogenase molybdenum-iron protein, alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
D CLJU_c16150 predicted Zn-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D CLJU_c38580 predicted Zn-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00622 Xylene degradation [PATH:clj00622]
D CLJU_c16150 predicted Zn-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D CLJU_c38580 predicted Zn-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00633 Nitrotoluene degradation [PATH:clj00633]
D CLJU_c28660 hyaB; hydrogenase-1 large chain K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D CLJU_c28670 hyaA; hydrogenase-1 small chain precursor K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D CLJU_c09110 cooS1; anaerobic-type carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CLJU_c17910 cooS2; carbon monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CLJU_c37670 codH; carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CLJU_c22510 iron-sulfur cluster binding protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CLJU_c09100 anaerobic-type carbon monoxide dehydrogenase, electron transfer subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CLJU_c23720 predicted nitrate reductase electron transfer subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
D CLJU_c20480 allophanate hydrolase subunit 1 K01941 uca; urea carboxylase [EC:6.3.4.6]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:clj00626]
D CLJU_c19540 zinc-containing alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CLJU_c16510 adhE1; bifunctional aldehyde/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLJU_c16520 adhE2; bifunctional aldehyde/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:clj03020]
D CLJU_c41120 DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CLJU_c41110 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CLJU_c40770 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CLJU_c12530 DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:clj03010]
D CLJU_c21320 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945 RP-S1; small subunit ribosomal protein S1
D CLJU_c28540 rspA; predicted 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CLJU_c13020 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CLJU_c40980 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CLJU_c40780 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CLJU_c40870 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CLJU_c42790 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CLJU_c41080 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CLJU_c40900 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CLJU_c40700 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CLJU_c41050 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CLJU_c40790 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CLJU_c41090 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CLJU_c40800 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CLJU_c40910 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CLJU_c13200 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CLJU_c12890 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CLJU_c40950 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CLJU_c42770 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CLJU_c41000 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CLJU_c07900 predicted 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CLJU_c08040 rpsU; predicted 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CLJU_c41150 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CLJU_c41010 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CLJU_c41040 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CLJU_c41030 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CLJU_c40920 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CLJU_c40890 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CLJU_c41130 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CLJU_c42730 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CLJU_c41140 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CLJU_c41160 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CLJU_c40710 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CLJU_c40940 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CLJU_c40850 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CLJU_c40970 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CLJU_c40760 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CLJU_c40880 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CLJU_c12930 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CLJU_c34440 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CLJU_c07360 rplU; predicted 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CLJU_c40990 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CLJU_c41020 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CLJU_c40930 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CLJU_c07380 rpmA; predicted 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CLJU_c12670 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CLJU_c40960 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CLJU_c40860 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CLJU_c02230 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CLJU_c12800 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CLJU_c41190 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CLJU_c42970 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CLJU_c34450 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CLJU_c40810 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CLJU_c41100 ribosomal protein L7Ae-like protein K07590 RP-L7A; large subunit ribosomal protein L7A
D CLJU_c00080 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c01290 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c14930 rrsG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c06230 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c01000 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c06520 rrsF; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c41440 rrsI; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c01140 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c28260 rrsH; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c06260 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c06550 rrlF; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c01010 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c00090 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c28250 rrlH; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c01300 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c14940 rrlG; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c01150 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c41430 rrlI; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c00100 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c28240 rrfH; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c01160 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c41420 rrfI; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c01020 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c06560 rrfF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c01310 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c14950 rrfG; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c06310 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:clj00970]
D CLJU_c06240 trnA1; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLJU_c41400 trnA3; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLJU_c06530 trnA2; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLJU_c36730 trnR4; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJU_c36810 trnR5; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJU_c00200 trnR1; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJU_c36690 trnR3; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJU_c00750 trnR2; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJU_c06570 trnN1; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLJU_c41390 trnN2; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLJU_c41470 trnN3; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLJU_c42250 trnD1; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLJU_c42280 trnD2; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLJU_c01330 trnC1; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CLJU_c34520 trnC2; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CLJU_c02760 trnQ1; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLJU_c28460 trnQ2; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLJU_c36780 trnQ3; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLJU_c42270 trnE2; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLJU_c42300 trnE3; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLJU_c31750 trnE1; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLJU_c34510 trnG1; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJU_c36750 trnG4; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJU_c36700 trnG2; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJU_c36820 trnG5; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJU_c36740 trnG3; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJU_c41220 trnG6; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJU_c36790 trnH; tRNA-His K14226 tRNA-His; tRNA His
D CLJU_c06250 trnI1; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CLJU_c06540 trnI2; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CLJU_c41580 trnL6; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJU_c41610 trnL7; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJU_c28440 trnL1; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJU_c36760 trnL4; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJU_c32740 trnL2; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJU_c33580 trnL3; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJU_c39240 trnL5; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJU_c36800 trnK5; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJU_c36720 trnK3; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJU_c01030 trnK1; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJU_c36770 trnK4; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJU_c28450 trnK2; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJU_c00110 trnM1; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJU_c41410 trnM3; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJU_c41590 trnM5; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJU_c14920 trnM2; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJU_c41570 trnM4; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJU_c41600 trnM6; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJU_c01170 trnF1; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLJU_c06320 trnF2; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLJU_c34500 trnF3; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLJU_c36710 trnP1; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLJU_c36830 trnP2; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLJU_c41830 trnP3; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLJU_c00190 trnS2; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLJU_c00180 trnS1; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLJU_c00770 trnS3; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLJU_c00840 trnS4; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLJU_c02530 trnT1; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLJU_c02560 trnT2; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLJU_c42240 trnT4; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLJU_c42680 trnT5; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLJU_c41210 trnT3; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLJU_c38150 trnW; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CLJU_c02540 trnY1; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLJU_c02570 trnY2; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLJU_c02550 trnV1; tRNA-Val K14237 tRNA-Val; tRNA Val
D CLJU_c42290 trnV4; tRNA-Val K14237 tRNA-Val; tRNA Val
D CLJU_c34490 trnV2; tRNA-Val K14237 tRNA-Val; tRNA Val
D CLJU_c42260 trnV3; tRNA-Val K14237 tRNA-Val; tRNA Val
D CLJU_c27280 trnU1; tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CLJU_c27690 trnU2; tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CLJU_c13390 gluS; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CLJU_c36920 gatA; glutamyl-tRNA amidotransferase, subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CLJU_c36910 gatB; glutamyl-tRNA amidotransferase, subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CLJU_c36930 gatC; glutamyl-tRNA amidotransferase, subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CLJU_c26740 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CLJU_c12150 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLJU_c33660 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLJU_c06740 asparaginyl-tRNA synthetase related protein K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CLJU_c42030 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CLJU_c41460 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLJU_c34470 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CLJU_c00170 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLJU_c07470 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CLJU_c27710 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CLJU_c20850 cysS1; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CLJU_c41270 cysS2; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CLJU_c01730 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CLJU_c12570 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CLJU_c34690 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CLJU_c02750 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLJU_c01890 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CLJU_c41480 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CLJU_c21700 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CLJU_c38360 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLJU_c33670 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CLJU_c34420 pheS; phenylalanyl-tRNA synthetase, subunit A K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CLJU_c34410 pheT; phenylalanyl-tRNA synthetase, subunit B K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CLJU_c34300 tyrS1; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLJU_c38210 tyrS2; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLJU_c38290 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:clj03060]
D CLJU_c40840 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CLJU_c41180 secE; predicted preprotein translocase SecE K03073 secE; preprotein translocase subunit SecE
D CLJU_c39100 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D CLJU_c33750 secD; predicted protein-export membrane protein K03072 secD; preprotein translocase subunit SecD
D CLJU_c33740 secF; predicted protein-export membrane protein K03074 secF; preprotein translocase subunit SecF
D CLJU_c33790 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D CLJU_c26750 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLJU_c42940 oxaA; predicted membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLJU_c02630 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLJU_c12880 predicted signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLJU_c12860 ftsY; predicted cell division protein K03110 ftsY; fused signal recognition particle receptor
D CLJU_c15660 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CLJU_c05980 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLJU_c12940 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLJU_c10710 predicted signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:clj04122]
D CLJU_c14540 nifS1; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJU_c23390 nifS2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJU_c28360 nifS3; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJU_c12110 homocysteine desulfhydrase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJU_c23380 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CLJU_c33380 predicted molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CLJU_c20220 predicted MoaD/ThiS domain protein K03636 moaD; sulfur-carrier protein
D CLJU_c20050 predicted MoaD/ThiS domain protein K03636 moaD; sulfur-carrier protein
D CLJU_c20230 thiF; predicted dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis, ThiF K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D CLJU_c20060 predicted dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D CLJU_c25050 predicted molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CLJU_c25060 predicted molybdenum cofactor biosynthesis protein B K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CLJU_c28350 thiI; predicted thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:clj03018]
D CLJU_c39110 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLJU_c13210 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CLJU_c39090 rnr; predicted ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CLJU_c22990 predicted ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJU_c35420 predicted RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJU_c04110 predicted ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJU_c09120 predicted ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJU_c25260 recQ; predicted ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CLJU_c02220 transcriptional termination factor rho K03628 rho; transcription termination factor Rho
D CLJU_c13290 conserved hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CLJU_c12200 predicted metal-dependent hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CLJU_c03250 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJU_c25790 pfk1; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJU_c07980 dnaK; predicted molecular chaperone DnaK, HSP70 family K04043 dnaK; molecular chaperone DnaK
D CLJU_c37190 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLJU_c21210 hfq; predicted RNA-binding protein Hfq K03666 hfq; host factor-I protein
D CLJU_c01520 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:clj03030]
D CLJU_c19140 predicted exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLJU_c36230 putative exonuclease with a BRCT domain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLJU_c36410 predicted DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLJU_c03240 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLJU_c30690 polC; DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLJU_c00850 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLJU_c01410 DNA polymerase related protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLJU_c07890 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLJU_c00020 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLJU_c42710 predicted DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CLJU_c08210 dnaG; predicted DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CLJU_c10150 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CLJU_c42780 ssb3; predicted single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLJU_c12960 predicted ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CLJU_c33610 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLJU_c36970 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:clj03410]
D CLJU_c37230 putative 8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D CLJU_c39270 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CLJU_c01950 predicted 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CLJU_c36310 predicted methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CLJU_c01120 predicted Uracil DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CLJU_c01720 predicted phage related DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CLJU_c20270 predicted endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CLJU_c33610 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLJU_c09240 recJ1; single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLJU_c36970 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:clj03420]
D CLJU_c41720 mfd; predicted transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CLJU_c03120 uvrA1; excinuclease ABC, subunit A K03701 uvrA; excinuclease ABC subunit A
D CLJU_c14750 uvrA2; predicted excinuclease ABC, subunit A K03701 uvrA; excinuclease ABC subunit A
D CLJU_c03110 uvrB; excinuclease ABC, subunit B K03702 uvrB; excinuclease ABC subunit B
D CLJU_c03170 uvrC; excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C
D CLJU_c30170 predicted ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJU_c21950 predicted helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJU_c14310 predicted helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJU_c28400 putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJU_c16530 predicted ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJU_c38340 predicted ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJU_c36980 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJU_c33610 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLJU_c36970 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:clj03430]
D CLJU_c21240 mutS1; predicted DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CLJU_c34380 DNA mismatch repair MutS related protein K07456 mutS2; DNA mismatch repair protein MutS2
D CLJU_c15050 MutS related protein K07456 mutS2; DNA mismatch repair protein MutS2
D CLJU_c21230 mutL1; predicted DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CLJU_c30170 predicted ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJU_c21950 predicted helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJU_c14310 predicted helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJU_c28400 putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJU_c16530 predicted ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJU_c38340 predicted ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJU_c36980 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJU_c11130 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CLJU_c11140 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CLJU_c09240 recJ1; single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLJU_c10150 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CLJU_c42780 ssb3; predicted single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLJU_c03240 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLJU_c30690 polC; DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLJU_c00020 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLJU_c00850 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLJU_c07890 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLJU_c01410 DNA polymerase related protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLJU_c19140 predicted exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLJU_c36230 putative exonuclease with a BRCT domain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLJU_c36410 predicted DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLJU_c36970 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLJU_c30980 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:clj03440]
D CLJU_c09240 recJ1; single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLJU_c10150 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CLJU_c42780 ssb3; predicted single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLJU_c00040 recF; predicted DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CLJU_c08110 recO; predicted DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
D CLJU_c00870 recR; predicted recombination protein RecR K06187 recR; recombination protein RecR
D CLJU_c13280 recA; recombinase RecA K03553 recA; recombination protein RecA
D CLJU_c33610 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLJU_c33830 ruvA; Holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D CLJU_c33820 ruvB; Holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CLJU_c12700 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLJU_c05370 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLJU_c02590 recD; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CLJU_c03240 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLJU_c30690 polC; DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLJU_c00020 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLJU_c00850 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLJU_c07890 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLJU_c01410 DNA polymerase related protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLJU_c19140 predicted exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLJU_c36230 putative exonuclease with a BRCT domain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLJU_c36410 predicted DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLJU_c12550 predicted primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:clj02010]
D CLJU_c20140 predicted ABC transport system, periplasmic component K05772 tupA; tungstate transport system substrate-binding protein
D CLJU_c20150 predicted ABC transport system, permease protein K05773 tupB; tungstate transport system permease protein
D CLJU_c20160 predicted ABC-type transport system, ATPase component K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D CLJU_c18330 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CLJU_c18310 predicted ABC nitrate/sulfonate/bicarbonate family transporter, permease component K15554 ssuC; sulfonate transport system permease protein
D CLJU_c18320 predicted ABC nitrate/sulfonate/bicarbonate family transporter, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CLJU_c25380 predicted ABC transporter K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D CLJU_c25390 putative ABC transporter, permease component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D CLJU_c25400 predicted ABC transporter, ATPase component K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D CLJU_c26020 predicted ABC-type molybdenum transport system, solute-binding component K02020 modA; molybdate transport system substrate-binding protein
D CLJU_c22170 modA1; predicted molybdate-binding extracellular protein precursor K02020 modA; molybdate transport system substrate-binding protein
D CLJU_c38100 modA2; predicted ABC-type molybdate transport system, periplasmic component K02020 modA; molybdate transport system substrate-binding protein
D CLJU_c22160 modB; predicted molybdate-binding extracellular protein precursor K02018 modB; molybdate transport system permease protein
D CLJU_c38090 modC; predicted molybdate ABC transporter, permease component K02018 modB; molybdate transport system permease protein
D CLJU_c38080 predicted ABC transporter, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CLJU_c22150 putative molybdate ABC transporter, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CLJU_c21730 putative spermidine/putrescine ABC transporter, periplasmic component K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CLJU_c21740 putative spermidine/putrescine ABC transporter, permease component K11070 potC; spermidine/putrescine transport system permease protein
D CLJU_c21750 putative spermidine/putrescine ABC transporter, permease component K11071 potB; spermidine/putrescine transport system permease protein
D CLJU_c21760 putative spermidine/putrescine ABC transporter, ATPase component K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CLJU_c34110 predicted maltose-binding extracellular protein precursor K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D CLJU_c35560 conserved hypothetical protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D CLJU_c30000 bmp; putative basic membrane protein K07335 bmpA; basic membrane protein A and related proteins
D CLJU_c39630 predicted ABC-type transporter, tperiplasmic component K07335 bmpA; basic membrane protein A and related proteins
D CLJU_c29980 predicted ABC-type transporter, permease component K23535 nupB; general nucleoside transport system permease protein
D CLJU_c39610 predicted ABC-type transporter, permease component K23535 nupB; general nucleoside transport system permease protein
D CLJU_c39600 predicted ABC-transporter, permease component K23536 nupC; general nucleoside transport system permease protein
D CLJU_c29970 predicted ABC-type transporter, permease component K23536 nupC; general nucleoside transport system permease protein
D CLJU_c39620 predicted ABC-type transporter, ATPase component K23537 nupA; general nucleoside transport system ATP-binding protein
D CLJU_c29990 predicted ABC-type transporter, ATPase component K23537 nupA; general nucleoside transport system ATP-binding protein
D CLJU_c01260 predicted ABC-Type sugar transporter, periplasmic component K10439 rbsB; ribose transport system substrate-binding protein
D CLJU_c01280 putative ABC-type sugar transporter, permease component K10440 rbsC; ribose transport system permease protein
D CLJU_c01270 putative ABC-type sugar transporter, ATPase component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CLJU_c34870 putative ABC-type sugar transporter, periplasmic component K23508 ytfQ; galactofuranose transport system substrate-binding protein
D CLJU_c34840 predicted ABC-type sugar transport system, permease component K23509 ytfT; galactofuranose transport system permease protein
D CLJU_c34850 predicted ABC-type sugar transport system, permease component K23509 ytfT; galactofuranose transport system permease protein
D CLJU_c34860 putative ABC-type sugar transport system, ATPase component K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D CLJU_c08950 rbsB; predicted ABC-type sugar transport system, periplasmic component K10540 mglB; methyl-galactoside transport system substrate-binding protein
D CLJU_c12390 pstS; predicted extracellular phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CLJU_c12400 pstC; predicted phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D CLJU_c12410 pstA; predicted phosphate transport system permease protein K02038 pstA; phosphate transport system permease protein
D CLJU_c12420 pstB; phosphate import ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CLJU_c28960 predicted ABC transport system, periplasmic solute-binding component K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D CLJU_c27620 predicted ABC transport system, periplasmic solute-binding component K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D CLJU_c28950 predicted ABC-type aminoacid transporter, permease component K16962 yxeN; putative S-methylcysteine transport system permease protein
D CLJU_c27630 predicted ABC-type aminoacid transporter, permease component K16962 yxeN; putative S-methylcysteine transport system permease protein
D CLJU_c28940 predicted ABC-type transporter, ATPase component K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D CLJU_c27640 putative ABC-type polar amino acid transport system, ATPase component K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D CLJU_c06300 putative ABC-type transporter, periplasmic component K02073 metQ; D-methionine transport system substrate-binding protein
D CLJU_c32100 putative ABC-type metal ion transport system, periplasmic component K02073 metQ; D-methionine transport system substrate-binding protein
D CLJU_c27660 predicted ABC-type transporter, periplasmic component K02073 metQ; D-methionine transport system substrate-binding protein
D CLJU_c04610 predicted ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D CLJU_c06290 predicted ABC-type transporter, permease component K02072 metI; D-methionine transport system permease protein
D CLJU_c27670 predicted ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D CLJU_c04600 predicted ABC transporter, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D CLJU_c06280 predicted ABC-type transporter, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D CLJU_c27680 predicted ABC transporter, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D CLJU_c36890 predicted ABC-type peptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CLJU_c22200 predicted metal binding protein precursor K09815 znuA; zinc transport system substrate-binding protein
D CLJU_c37880 predicted metal binding protein K09815 znuA; zinc transport system substrate-binding protein
D CLJU_c31800 predicted metal ABC transporter, permease component K09816 znuB; zinc transport system permease protein
D CLJU_c31790 predicted metal ABC transporter, ATPase component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CLJU_c22220 predicted membrane protein K02009 cbiN; cobalt/nickel transport protein
D CLJU_c22230 cbiM1; predicted cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CLJU_c33200 cbiM2; predicted cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CLJU_c28600 cbiQ1; predicted cobalt transport system, permease subunit K02008 cbiQ; cobalt/nickel transport system permease protein
D CLJU_c32040 putative cobalt permease K02008 cbiQ; cobalt/nickel transport system permease protein
D CLJU_c28590 putative ABC-type cobalt transport protein, ATPase component K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CLJU_c32030 putative ABC-type cobalt transport protein, ATPase component K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CLJU_c24470 putative biotin biosynthesis protein K03523 bioY; biotin transport system substrate-specific component
D CLJU_c40730 cbiQ2; predicted ABC-type cobalt transport system, permease component K16785 ecfT; energy-coupling factor transport system permease protein
D CLJU_c22320 predicted ABC cobalt transport protein, permease component K16785 ecfT; energy-coupling factor transport system permease protein
D CLJU_c40750 cbiO3; predicted ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLJU_c40740 cbiO2; predicted ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLJU_c15070 predicted Na+ ABC transporter, permease component K09696 natB; sodium transport system permease protein
D CLJU_c15080 putative Na+ ABC transporter, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D CLJU_c06470 predicted transporter protein K19310 bcrB; bacitracin transport system permease protein
D CLJU_c06480 predicted ABC transporter, permease component K19310 bcrB; bacitracin transport system permease protein
D CLJU_c00790 putative ABC transporter, permease component K19310 bcrB; bacitracin transport system permease protein
D CLJU_c00780 predicted transporter protein K19310 bcrB; bacitracin transport system permease protein
D CLJU_c06490 predicted ABC transporter, ATPase component K19309 bcrA; bacitracin transport system ATP-binding protein
D CLJU_c00800 predicted ABC transporter, ATPase component K19309 bcrA; bacitracin transport system ATP-binding protein
D CLJU_c30150 putative permease K11632 bceB; bacitracin transport system permease protein
D CLJU_c14430 putative transporter protein K11632 bceB; bacitracin transport system permease protein
D CLJU_c14420 predicted ABC transporter, ATPase component K11631 bceA; bacitracin transport system ATP-binding protein
D CLJU_c30160 predicted ABC transporter, ATPase component K11631 bceA; bacitracin transport system ATP-binding protein
D CLJU_c13800 putative permease K20460 nukE; lantibiotic transport system permease protein
D CLJU_c13810 predicted ABC transporter, permease component K20461 nukG; lantibiotic transport system permease protein
D CLJU_c13790 predicted ABC transporter, ATPase component K20459 nukF; lantibiotic transport system ATP-binding protein
D CLJU_c09150 predicted permease K20491 nisE; lantibiotic transport system permease protein
D CLJU_c37420 predicted transporter protein K20491 nisE; lantibiotic transport system permease protein
D CLJU_c22930 predicted permease K20491 nisE; lantibiotic transport system permease protein
D CLJU_c09160 putative permease K20492 nisG; lantibiotic transport system permease protein
D CLJU_c37430 predicted transporter protein K20492 nisG; lantibiotic transport system permease protein
D CLJU_c22940 predicted permease K20492 nisG; lantibiotic transport system permease protein
D CLJU_c37410 predicted ABC transporter, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D CLJU_c09140 predicted ABC transporter, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D CLJU_c22920 predicted ABC transporter, ATP-binding component K20490 nisF; lantibiotic transport system ATP-binding protein
D CLJU_c05650 putative ABC-type transport system K09808 lolC_E; lipoprotein-releasing system permease protein
D CLJU_c05660 predicted ABC transporter, ATPase component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CLJU_c14250 predicted ABC transporter, permease component K19084 braE; bacitracin transport system permease protein
D CLJU_c14240 predicted ABC transporter, ATPase component K19083 braD; bacitracin transport system ATP-binding protein
D CLJU_c03080 putative cell division protein K09811 ftsX; cell division transport system permease protein
D CLJU_c03070 ftsE; predicted ATPase involved in cell division K09812 ftsE; cell division transport system ATP-binding protein
D CLJU_c18900 predicted ABC-type transporter, transmembrane component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJU_c08910 predicted ABC-type multidrug/protein/lipid transport system, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJU_c26230 predicted transport protein, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJU_c15170 ABC transporter related, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJU_c08920 predicted ABC-type multidrug/protein/lipid transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJU_c15180 predicted ABC transporter, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJU_c26240 predicted transport protein, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJU_c18910 predicted ABC-type transporter, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJU_c19020 predicted ABC transporter with duplicated ATPase domain K18231 msr; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:clj02060]
D CLJU_c40530 pts1; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CLJU_c13350 ptsH; predicted phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D CLJU_c20590 fructose-specific PTS (phosphotransferase system) system enzyme IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CLJU_c26070 phosphoenolpyruvate: sugar phosphotransferase system (PTS), fructose/mannose specific IIA subunit K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D CLJU_c20600 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:clj03070]
D CLJU_c33750 secD; predicted protein-export membrane protein K03072 secD; preprotein translocase subunit SecD
D CLJU_c33740 secF; predicted protein-export membrane protein K03074 secF; preprotein translocase subunit SecF
D CLJU_c41180 secE; predicted preprotein translocase SecE K03073 secE; preprotein translocase subunit SecE
D CLJU_c39100 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D CLJU_c40840 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CLJU_c33790 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D CLJU_c26750 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLJU_c42940 oxaA; predicted membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLJU_c02630 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLJU_c12860 ftsY; predicted cell division protein K03110 ftsY; fused signal recognition particle receptor
D CLJU_c12880 predicted signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:clj02020]
D CLJU_c12380 phoR; predicted phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLJU_c19450 predicted two-component response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLJU_c12370 phoB; predicted transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLJU_c06950 predicted transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLJU_c12390 pstS; predicted extracellular phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CLJU_c29210 predicted transcriptional regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D CLJU_c41740 predicted serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CLJU_c08430 predicted serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CLJU_c09710 flaB1; putative flagellin B K02406 fliC; flagellin
D CLJU_c09630 flagellin protein K02406 fliC; flagellin
D CLJU_c10180 flaB2; flagellin subunit protein B K02406 fliC; flagellin
D CLJU_c10410 RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
D CLJU_c01450 motA1; chemotaxis protein K02556 motA; chemotaxis protein MotA
D CLJU_c19720 motA2; predicted flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D CLJU_c39520 kdpD; predicted osmosensitive K+ channel histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CLJU_c39510 predicted two-component response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CLJU_c39560 kdpA; potassium-transporting ATPase, a chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D CLJU_c39550 kdpB; potassium-transporting ATPase, b chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D CLJU_c39540 kdpC; potassium-transporting ATPase, c chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D CLJU_c29600 predicted two-component response regulator K07775 resD; two-component system, OmpR family, response regulator ResD
D CLJU_c41760 predicted sensory transduction protein K07775 resD; two-component system, OmpR family, response regulator ResD
D CLJU_c30140 predicted two-component response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D CLJU_c00010 dnaA; predicted chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D CLJU_c14420 predicted ABC transporter, ATPase component K11631 bceA; bacitracin transport system ATP-binding protein
D CLJU_c30160 predicted ABC transporter, ATPase component K11631 bceA; bacitracin transport system ATP-binding protein
D CLJU_c30150 putative permease K11632 bceB; bacitracin transport system permease protein
D CLJU_c14430 putative transporter protein K11632 bceB; bacitracin transport system permease protein
D CLJU_c14250 predicted ABC transporter, permease component K19084 braE; bacitracin transport system permease protein
D CLJU_c14240 predicted ABC transporter, ATPase component K19083 braD; bacitracin transport system ATP-binding protein
D CLJU_c14400 predicted two component sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CLJU_c19940 conserved hypothetical protein K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CLJU_c14180 predicted two component sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CLJU_c14390 two-component response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D CLJU_c14170 two-component response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D CLJU_c30640 predicted sensory transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CLJU_c15470 predicted sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CLJU_c15460 predicted two-component response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D CLJU_c25090 predicted sensory transduction histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLJU_c14370 vanS; sensor protein VanS K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLJU_c32970 predicted two-component response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLJU_c21980 predicted response regulator receiver domain protein K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLJU_c14380 vanR; regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLJU_c38680 predicted two-component response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLJU_c15720 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJU_c15810 predicted two component sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D CLJU_c17320 predicted two component sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D CLJU_c15800 predicted two-component response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D CLJU_c17310 predicted transcriptional regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D CLJU_c22960 predicted two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJU_c25670 predicted two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJU_c09180 predicted two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJU_c07840 predicted two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJU_c09170 predicted two-component response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLJU_c22950 predicted two-component response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLJU_c25720 predicted two-component response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLJU_c37410 predicted ABC transporter, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D CLJU_c09140 predicted ABC transporter, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D CLJU_c22920 predicted ABC transporter, ATP-binding component K20490 nisF; lantibiotic transport system ATP-binding protein
D CLJU_c09150 predicted permease K20491 nisE; lantibiotic transport system permease protein
D CLJU_c37420 predicted transporter protein K20491 nisE; lantibiotic transport system permease protein
D CLJU_c22930 predicted permease K20491 nisE; lantibiotic transport system permease protein
D CLJU_c09160 putative permease K20492 nisG; lantibiotic transport system permease protein
D CLJU_c37430 predicted transporter protein K20492 nisG; lantibiotic transport system permease protein
D CLJU_c22940 predicted permease K20492 nisG; lantibiotic transport system permease protein
D CLJU_c11220 spo0A; spo0A-like protein K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CLJU_c25350 citC1; citrate (pro-3S)-lyase ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D CLJU_c40550 citC2; citrate (pro-3S)-lyase ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D CLJU_c25340 citrate lyase acyl carrier protein, citrate lyase gamma chain K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D CLJU_c30490 citrate lyase acyl carrier protein, citrate lyase gamma chain K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D CLJU_c40580 citrate lyase acyl carrier protein, gamma chain K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D CLJU_c25330 citrate lyase beta chain, acyl lyase subunit K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D CLJU_c30480 citrate lyase beta chain, acyl lyase subunit K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D CLJU_c40570 citrate lyase beta chain K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D CLJU_c25320 citrate lyase alpha chain K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D CLJU_c30470 citrate lyase alpha chain K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D CLJU_c40560 citrate lyase alpha chain K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D CLJU_c25290 citX; predicted apo-citrate lyase phosphoribosyl-dephospho-CoA transferase K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D CLJU_c25370 citG; triphosphoribosyl-dephospho-CoA synthase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D CLJU_c38480 predicted sensor histidine kinase K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D CLJU_c38470 predicted response regulator K11615 malR; two-component system, CitB family, response regulator MalR
D CLJU_c04160 maeB; NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CLJU_c25360 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CLJU_c30500 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CLJU_c38460 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CLJU_c25300 predicted citrate:cation symporter K11616 maeN; malate:Na+ symporter
D CLJU_c38450 predicted citrate:cation symporter K11616 maeN; malate:Na+ symporter
D CLJU_c15080 putative Na+ ABC transporter, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D CLJU_c15070 predicted Na+ ABC transporter, permease component K09696 natB; sodium transport system permease protein
D CLJU_c28480 AgrB-like protein K07813 agrB; accessory gene regulator B
D CLJU_c27530 AgrB-like protein K07813 agrB; accessory gene regulator B
D CLJU_c35180 predicted two-component sensor histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLJU_c35170 predicted response regulator receiver domain protein K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CLJU_c09690 predicted carbon storage regulator K03563 csrA; carbon storage regulator
D CLJU_c09540 predicted carbon storage regulator K03563 csrA; carbon storage regulator
D CLJU_c28880 two-component sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D CLJU_c32910 conserved hypothetical protein K11621 liaG; lia operon protein LiaG
D CLJU_c28860 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D CLJU_c28830 putative cell wall binding protein K02279 cpaB; pilus assembly protein CpaB
D CLJU_c28820 putative response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D CLJU_c28810 putative type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CLJU_c28800 putative type II secretion system protein K12510 tadB; tight adherence protein B
D CLJU_c28790 putative type II secretion system protein K12511 tadC; tight adherence protein C
D CLJU_c04050 predicted nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D CLJU_c42650 glnB; predicted nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D CLJU_c41950 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLJU_c23630 predicted acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLJU_c39170 predicted RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CLJU_c10920 conserved hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D CLJU_c28670 hyaA; hydrogenase-1 small chain precursor K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D CLJU_c28660 hyaB; hydrogenase-1 large chain K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D CLJU_c09420 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CLJU_c18040 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c08960 predicted methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c04770 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c06030 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c03920 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c03950 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c09030 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c09310 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c10160 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c02870 predicted chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c18670 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c18880 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c19970 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c28030 predicted methyl-accepting chemotaxis protein, Cache-1 domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c14810 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c15520 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c24340 predicted methyl-accepting transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c24770 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c22880 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c22910 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c33150 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c33490 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c22100 predicted methyl-accepting chemotaxis transducer protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c30400 predicted chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c30430 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c30560 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c21430 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c14110 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c13460 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c13760 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c13830 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c13860 putative methyl-accepting transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c38740 predicted membrane-bound methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c36200 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c42480 predicted membrane associated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c09390 cheW1; chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D CLJU_c09460 cheW2; chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D CLJU_c22110 cheW3; predicted chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLJU_c09430 cheA1; chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLJU_c22120 cheA2; predicted chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLJU_c09450 cheY1; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLJU_c22130 cheY2; predicted chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLJU_c30040 predicted signal receiver domain protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLJU_c09410 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CLJU_c23780 predicted transcription regulator, crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLJU_c10830 crp1; predicted CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLJU_c20780 sensor histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D CLJU_c28070 putative membrane-bound ATPase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D CLJU_c20770 predicted two-component response regulator K07719 glnL; two-component system, response regulator GlnL
D CLJU_c28040 transcriptional regulatory protein K07719 glnL; two-component system, response regulator GlnL
D CLJU_c28060 transcriptional regulatory protein K07719 glnL; two-component system, response regulator GlnL
D CLJU_c17730 hypothetical protein with a response regulator receiver domain K07719 glnL; two-component system, response regulator GlnL
D CLJU_c11850 predicted response regulator (CheY-like and HTH domains) K07720 yesN; two-component system, response regulator YesN
D CLJU_c25870 putative protein with a AraC-like DNA binding domain K07720 yesN; two-component system, response regulator YesN
D CLJU_c39690 predicted response regulator K07720 yesN; two-component system, response regulator YesN
D CLJU_c14630 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D CLJU_c02350 epsC; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CLJU_c09490 flgM; negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D CLJU_c21930 arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:clj02024]
D CLJU_c23480 luxS; S-Ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CLJU_c21210 hfq; predicted RNA-binding protein Hfq K03666 hfq; host factor-I protein
D CLJU_c16070 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CLJU_c16080 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CLJU_c14780 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CLJU_c39510 predicted two-component response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CLJU_c42500 predicted aminoacid permease K20265 gadC; glutamate:GABA antiporter
D CLJU_c26130 predicted ABC transporter, substrate-binding component K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CLJU_c26300 predicted extracellular solute binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CLJU_c26150 predicted ABC transporter, permease component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CLJU_c26280 predicted ABC transporter, permease component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CLJU_c26160 predicted ABC transporter, permease component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CLJU_c26290 predicted ABC transporter, permease component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CLJU_c26140 predicted ABC transporter, ATPase component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CLJU_c26270 predicted ABC transporter, ATPase component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CLJU_c35160 predicted cell wall binding protein K20276 bapA; large repetitive protein
D CLJU_c23780 predicted transcription regulator, crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLJU_c10830 crp1; predicted CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLJU_c22090 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CLJU_c42060 conserved membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLJU_c28480 AgrB-like protein K07813 agrB; accessory gene regulator B
D CLJU_c27530 AgrB-like protein K07813 agrB; accessory gene regulator B
D CLJU_c35180 predicted two-component sensor histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLJU_c35170 predicted response regulator receiver domain protein K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CLJU_c30640 predicted sensory transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CLJU_c15470 predicted sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CLJU_c15460 predicted two-component response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D CLJU_c36890 predicted ABC-type peptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CLJU_c22540 predicted peptide ABC transporter, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLJU_c22580 predicted peptide ABC transporter, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLJU_c12040 dppA; predicted ABC-type dipeptide transport system K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLJU_c22670 predicted peptide ABC transporter, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLJU_c22660 predicted peptide ABC transporter, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLJU_c12050 dppB; predicted ABC-type dipeptide transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLJU_c22600 predicted peptide ABC transporter, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLJU_c22590 predicted peptide ABC transporter, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLJU_c12060 dppC; predicted ABC-type dipeptide transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLJU_c22650 predicted peptide ABC transporter, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLJU_c22570 predicted peptide ABC transporter, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLJU_c22640 predicted peptide ABC transporter, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLJU_c12070 dppD; predicted ABC-type dipeptide transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLJU_c12080 dppF; predicted ABC-type dipeptide transport system, ATPase component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CLJU_c22560 predicted peptide ABC transporter, ATPase component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CLJU_c26750 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLJU_c42940 oxaA; predicted membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLJU_c41180 secE; predicted preprotein translocase SecE K03073 secE; preprotein translocase subunit SecE
D CLJU_c39100 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D CLJU_c40840 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CLJU_c33790 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D CLJU_c02630 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLJU_c12860 ftsY; predicted cell division protein K03110 ftsY; fused signal recognition particle receptor
D CLJU_c12880 predicted signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLJU_c11220 spo0A; spo0A-like protein K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CLJU_c22020 zinc dependent phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CLJU_c22960 predicted two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJU_c25670 predicted two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJU_c09180 predicted two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJU_c07840 predicted two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJU_c09170 predicted two-component response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLJU_c22950 predicted two-component response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLJU_c25720 predicted two-component response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLJU_c37410 predicted ABC transporter, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D CLJU_c09140 predicted ABC transporter, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D CLJU_c22920 predicted ABC transporter, ATP-binding component K20490 nisF; lantibiotic transport system ATP-binding protein
D CLJU_c09150 predicted permease K20491 nisE; lantibiotic transport system permease protein
D CLJU_c37420 predicted transporter protein K20491 nisE; lantibiotic transport system permease protein
D CLJU_c22930 predicted permease K20491 nisE; lantibiotic transport system permease protein
D CLJU_c09160 putative permease K20492 nisG; lantibiotic transport system permease protein
D CLJU_c37430 predicted transporter protein K20492 nisG; lantibiotic transport system permease protein
D CLJU_c22940 predicted permease K20492 nisG; lantibiotic transport system permease protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:clj02030]
D CLJU_c18040 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c08960 predicted methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c04770 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c06030 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c03920 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c03950 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c09030 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c09310 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c10160 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c02870 predicted chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c18670 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c18880 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c19970 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c28030 predicted methyl-accepting chemotaxis protein, Cache-1 domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c14810 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c15520 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c24340 predicted methyl-accepting transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c24770 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c22880 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c22910 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c33150 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c33490 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c22100 predicted methyl-accepting chemotaxis transducer protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c30400 predicted chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c30430 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c30560 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c21430 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c14110 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c13460 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c13760 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c13830 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c13860 putative methyl-accepting transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c38740 predicted membrane-bound methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c36200 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c42480 predicted membrane associated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c01260 predicted ABC-Type sugar transporter, periplasmic component K10439 rbsB; ribose transport system substrate-binding protein
D CLJU_c08950 rbsB; predicted ABC-type sugar transport system, periplasmic component K10540 mglB; methyl-galactoside transport system substrate-binding protein
D CLJU_c09430 cheA1; chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLJU_c22120 cheA2; predicted chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLJU_c09390 cheW1; chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D CLJU_c09460 cheW2; chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D CLJU_c22110 cheW3; predicted chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLJU_c09450 cheY1; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLJU_c22130 cheY2; predicted chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLJU_c30040 predicted signal receiver domain protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLJU_c09440 cheC; chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D CLJU_c18860 putative CheC-like chemotaxis protein K03409 cheX; chemotaxis protein CheX
D CLJU_c09410 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CLJU_c09400 cheD; chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D CLJU_c09420 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CLJU_c10230 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CLJU_c09470 fliM; flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D CLJU_c09480 fliN; predicted flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CLJU_c01450 motA1; chemotaxis protein K02556 motA; chemotaxis protein MotA
D CLJU_c19720 motA2; predicted flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D CLJU_c01460 motB1; predicted flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CLJU_c19710 motB2; predicted flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:clj02040]
D CLJU_c10210 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CLJU_c10220 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CLJU_c10230 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CLJU_c10240 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D CLJU_c10250 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CLJU_c10260 fliJ; flagellar biosynthesis chaperone FliJ K02413 fliJ; flagellar protein FliJ
D CLJU_c10270 fliK; predicted flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D CLJU_c10320 fliL; flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D CLJU_c09470 fliM; flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D CLJU_c09480 fliN; predicted flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CLJU_c10330 fliO; putative flagellar biogenesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D CLJU_c10340 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CLJU_c10350 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CLJU_c10370 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CLJU_c10360 fusion of flagellar biosynthesis proteins FliR and FlhB K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB
D CLJU_c10190 flgB; flagellar basal body protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CLJU_c10200 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CLJU_c10280 flgD; predicted flagellar hook protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D CLJU_c10300 flgE; predicted flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D CLJU_c10440 flgG1; flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D CLJU_c10450 flgG2; flagellar basal-body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D CLJU_c09510 flgK; Flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D CLJU_c09520 flgL; putative flagellar hook-associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D CLJU_c09710 flaB1; putative flagellin B K02406 fliC; flagellin
D CLJU_c09630 flagellin protein K02406 fliC; flagellin
D CLJU_c10180 flaB2; flagellin subunit protein B K02406 fliC; flagellin
D CLJU_c09580 fliD1; flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2
D CLJU_c09610 fliD2; flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2
D CLJU_c09570 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CLJU_c01450 motA1; chemotaxis protein K02556 motA; chemotaxis protein MotA
D CLJU_c19720 motA2; predicted flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D CLJU_c01460 motB1; predicted flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CLJU_c19710 motB2; predicted flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CLJU_c09490 flgM; negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
D CLJU_c08220 rpoD; predicted RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D CLJU_c39170 predicted RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CLJU_c10410 RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CLJU_c39110 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D CLJU_c06650 metH1; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:clj01501]
D CLJU_c36890 predicted ABC-type peptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CLJU_c06790 putative antirepressor regulating drug resistance (MecR1), membrane-bound K02172 blaR1; bla regulator protein blaR1
D CLJU_c38710 putative membrane-associated protein with a peptidase domain K02172 blaR1; bla regulator protein blaR1
D CLJU_c25170 conserved hypothetical protein K02172 blaR1; bla regulator protein blaR1
D CLJU_c13480 putative regulatory protein, associated with drug resistance K02172 blaR1; bla regulator protein blaR1
D CLJU_c18930 predicted regulatory protein K02172 blaR1; bla regulator protein blaR1
D CLJU_c13470 predicted transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLJU_c06780 predicted penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLJU_c38720 predicted penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLJU_c25160 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLJU_c13550 hypothetical protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLJU_c18920 predicted transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLJU_c16430 putative beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CLJU_c22260 predicted transporter protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CLJU_c05950 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CLJU_c33940 predicted bifunctional transglycosylase/transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLJU_c07250 predicted penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CLJU_c20280 predicted penicillin binding protein, transpeptidase domain K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:clj01502]
D CLJU_c25090 predicted sensory transduction histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLJU_c14370 vanS; sensor protein VanS K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLJU_c32970 predicted two-component response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLJU_c21980 predicted response regulator receiver domain protein K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLJU_c14380 vanR; regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLJU_c38680 predicted two-component response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLJU_c32110 ddl; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLJU_c32120 alr2; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLJU_c12010 alr1; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLJU_c40390 alr3; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLJU_c10580 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CLJU_c10590 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLJU_c09330 murG2; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 2 K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CLJU_c15720 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:clj01503]
D CLJU_c01880 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c39200 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c17000 predicted cell wall binding protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c31080 putative cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c40690 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c05110 predicted cell wall binding protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c05120 predicted cell wall binding protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c41740 predicted serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CLJU_c08430 predicted serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CLJU_c22260 predicted transporter protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CLJU_c05950 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:clj01000]
C 01001 Protein kinases [BR:clj01001]
D CLJU_c12620 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CLJU_c02880 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D CLJU_c05160 predicted exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D CLJU_c12380 phoR; predicted phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLJU_c39520 kdpD; predicted osmosensitive K+ channel histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CLJU_c14400 predicted two component sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CLJU_c19940 conserved hypothetical protein K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CLJU_c14180 predicted two component sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CLJU_c30640 predicted sensory transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CLJU_c15470 predicted sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CLJU_c25090 predicted sensory transduction histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLJU_c14370 vanS; sensor protein VanS K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLJU_c15810 predicted two component sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D CLJU_c17320 predicted two component sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D CLJU_c22960 predicted two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJU_c25670 predicted two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJU_c09180 predicted two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJU_c07840 predicted two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJU_c28880 two-component sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D CLJU_c38480 predicted sensor histidine kinase K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D CLJU_c35180 predicted two-component sensor histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLJU_c09430 cheA1; chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLJU_c22120 cheA2; predicted chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLJU_c20780 sensor histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D CLJU_c28070 putative membrane-bound ATPase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D CLJU_c30050 putative sensor histidine kinase/response regulator hybrid K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:clj01009]
D CLJU_c03250 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJU_c25790 pfk1; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJU_c19770 heat shock protein htpG, chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D CLJU_c12610 predicted protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:clj01002]
D CLJU_c10710 predicted signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CLJU_c05610 predicted bifunctional type IV leader peptidase/N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CLJU_c28890 putative type IV leader peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CLJU_c07910 gpr; germination protease precursor K06012 gpr; spore protease [EC:3.4.24.78]
D CLJU_c28650 hyaD; predicted Ni,Fe-hydrogenase maturation factor K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D CLJU_c12310 spoIIGA; putative sporulation factor SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D CLJU_c37170 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CLJU_c40680 predicted glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase
D CLJU_c36940 predicted glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase
D CLJU_c23200 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLJU_c01500 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLJU_c01490 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLJU_c08560 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CLJU_c17370 gltB; glutamate synthase, large subunit K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D CLJU_c40420 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CLJU_c05460 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CLJU_c26720 asnB; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CLJU_c17710 asn; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CLJU_c09220 putative protease K03152 thiJ; protein deglycase [EC:3.5.1.124]
D CLJU_c28480 AgrB-like protein K07813 agrB; accessory gene regulator B
D CLJU_c27530 AgrB-like protein K07813 agrB; accessory gene regulator B
D CLJU_c40290 predicted protease K07052 K07052; CAAX protease family protein
D CLJU_c14960 putative protease K07052 K07052; CAAX protease family protein
D CLJU_c32270 hypothetical protein K07052 K07052; CAAX protease family protein
D CLJU_c16230 putative membrane protein K07052 K07052; CAAX protease family protein
D CLJU_c35600 conserved hypothetical protein K07052 K07052; CAAX protease family protein
D CLJU_c41840 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D CLJU_c19050 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D CLJU_c06860 D-glutamyl-meso-diaminopimelate peptidase K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11]
D CLJU_c15720 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJU_c37360 predicted peptidase K06972 PITRM1; presequence protease [EC:3.4.24.-]
D CLJU_c04880 predicted peptidase K06972 PITRM1; presequence protease [EC:3.4.24.-]
D CLJU_c12090 predicted dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CLJU_c17390 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CLJU_c19290 pepT1; peptidase T (aminotripeptidase) K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D CLJU_c19310 pepT2; peptidase T (aminotripeptidase) K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D CLJU_c15280 amaB1; N-carbamoyl-L-amino acid hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D CLJU_c35780 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CLJU_c11000 pepQ1; Xaa-Pro dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CLJU_c40100 putative aminopeptidase K19701 ywaD; aminopeptidase YwaD [EC:3.4.11.6 3.4.11.10]
D CLJU_c15760 predicted aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D CLJU_c26670 isoaspartyl dipeptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]
D CLJU_c06110 ftsH1; predicted cell division protein FtsH-like protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLJU_c38350 ftsH2; predicted ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLJU_c41530 ftsH3; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLJU_c15060 predicted aminopeptidase K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D CLJU_c07320 predicted stage IV sporulation protein FB K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-]
D CLJU_c13090 predicted membrane-associated metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D CLJU_c06790 putative antirepressor regulating drug resistance (MecR1), membrane-bound K02172 blaR1; bla regulator protein blaR1
D CLJU_c38710 putative membrane-associated protein with a peptidase domain K02172 blaR1; bla regulator protein blaR1
D CLJU_c25170 conserved hypothetical protein K02172 blaR1; bla regulator protein blaR1
D CLJU_c13480 putative regulatory protein, associated with drug resistance K02172 blaR1; bla regulator protein blaR1
D CLJU_c18930 predicted regulatory protein K02172 blaR1; bla regulator protein blaR1
D CLJU_c41740 predicted serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CLJU_c08430 predicted serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CLJU_c42080 predicted subtilisin related protease K17734 aprX; serine protease AprX [EC:3.4.21.-]
D CLJU_c14360 D-alanyl-D-alanine carboxypeptidase precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLJU_c11270 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLJU_c11330 D-alanyl-D-alanine carboxypeptidase related protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLJU_c07440 dacA1; D-alanyl-D-alanine carboxypeptidase precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLJU_c32940 clpP1; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CLJU_c35640 clpP2; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CLJU_c32660 putative ATP-dependent Lon-type protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CLJU_c35620 nucleoside-triphosphate diphosphatase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CLJU_c42720 ATP-dependent protease LA K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CLJU_c21030 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CLJU_c36670 predicted transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D CLJU_c05980 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLJU_c12940 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLJU_c03090 predicted protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CLJU_c06040 predicted protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CLJU_c02090 cphB; cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D CLJU_c06100 putative membrane-associated protein K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
D CLJU_c11210 spoIVB; predicted stage IV sporulation protein B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D CLJU_c01350 putative LD-carboxypeptidase A family protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CLJU_c19030 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CLJU_c34390 predicted protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D CLJU_c12240 predicted protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:clj01003]
D CLJU_c19690 predicted glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D CLJU_c02160 murG1; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CLJU_c15830 putative monogalactosyldiacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CLJU_c19670 predicted glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D CLJU_c33940 predicted bifunctional transglycosylase/transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLJU_c15910 predicted multimodular transpeptidase-transglycosylase K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D CLJU_c34010 predicted UDP-N-acetyl-D-mannosaminuronic acid transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D CLJU_c02340 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CLJU_c38300 cyclic beta 1-2 glucan synthetase K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
D CLJU_c04000 Glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:clj01005]
D CLJU_c05420 predicted glycosyltransferase K12996 rgpA; rhamnosyltransferase [EC:2.4.1.-]
D CLJU_c34140 conserved hypothetical protein K26858 wzy; O-antigen polymerase [EC:2.4.99.27]
D CLJU_c04450 predicted glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D CLJU_c38890 predicted glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D CLJU_c03960 predicted glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D CLJU_c02340 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:clj01011]
D CLJU_c02460 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLJU_c41980 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLJU_c03180 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CLJU_c41810 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CLJU_c41450 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CLJU_c10570 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CLJU_c32110 ddl; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLJU_c32120 alr2; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLJU_c12010 alr1; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLJU_c40390 alr3; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLJU_c41940 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CLJU_c01350 putative LD-carboxypeptidase A family protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CLJU_c10590 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLJU_c09330 murG2; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 2 K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CLJU_c06220 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJU_c15920 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJU_c15960 putative phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJU_c15820 predicted phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJU_c32240 putative phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJU_c34040 virulence factor MviN related protein K03980 murJ; putative peptidoglycan lipid II flippase
D CLJU_c34120 predicted virulence factor MviN related protein K03980 murJ; putative peptidoglycan lipid II flippase
D CLJU_c33940 predicted bifunctional transglycosylase/transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLJU_c15910 predicted multimodular transpeptidase-transglycosylase K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D CLJU_c07250 predicted penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CLJU_c20280 predicted penicillin binding protein, transpeptidase domain K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CLJU_c10560 ftsI1; predicted cell division protein K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CLJU_c38810 ftsI2; predicted cell division protein K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CLJU_c06020 pbp; predicted beta-lactam-inducible penicillin-binding protein K21467 pbpC; penicillin-binding protein 3
D CLJU_c03150 predicted peptidoglycan synthetase K05364 pbpA; penicillin-binding protein A
D CLJU_c14360 D-alanyl-D-alanine carboxypeptidase precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLJU_c11270 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLJU_c11330 D-alanyl-D-alanine carboxypeptidase related protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLJU_c07440 dacA1; D-alanyl-D-alanine carboxypeptidase precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLJU_c15720 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJU_c23200 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLJU_c01500 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLJU_c01490 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLJU_c33590 predicted lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CLJU_c33860 conserved hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CLJU_c02980 spore cortex-lytic enzyme precursor K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CLJU_c04660 putative cell wall hydrolase K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CLJU_c02470 predicted stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D CLJU_c01880 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c39200 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c17000 predicted cell wall binding protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c31080 putative cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c40690 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c05110 predicted cell wall binding protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c05120 predicted cell wall binding protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:clj01004]
D CLJU_c42170 fabD; malonyl-CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CLJU_c42190 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CLJU_c42150 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CLJU_c34940 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLJU_c29220 predicted short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLJU_c42160 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLJU_c42130 fabZ; predicted hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CLJU_c42180 fabI; enoyl-[acyl-carrier protein] reductase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CLJU_c29650 putative esterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D CLJU_c08530 putative lysophospholipase (TesA-like) K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D CLJU_c39390 predicted AMP-dependent ligase/synthetase K12507 fadK; acyl-CoA synthetase [EC:6.2.1.-]
D CLJU_c12810 plsX; predicted fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CLJU_c06600 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLJU_c39280 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:clj01008]
D CLJU_c34360 predicted FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
C 01006 Prenyltransferases [BR:clj01006]
D CLJU_c11150 fps; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CLJU_c40310 predicted polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CLJU_c13060 uppS1; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLJU_c35470 uppS2; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLJU_c21220 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CLJU_c40280 putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:clj01007]
D CLJU_c13390 gluS; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CLJU_c26740 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CLJU_c34300 tyrS1; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLJU_c38210 tyrS2; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLJU_c38290 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CLJU_c20850 cysS1; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CLJU_c41270 cysS2; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CLJU_c21700 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CLJU_c01730 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CLJU_c01890 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CLJU_c34690 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CLJU_c02750 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLJU_c41480 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CLJU_c33660 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLJU_c06740 asparaginyl-tRNA synthetase related protein K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CLJU_c42030 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CLJU_c33670 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CLJU_c41460 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLJU_c00170 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLJU_c38360 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLJU_c34470 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CLJU_c12150 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLJU_c34420 pheS; phenylalanyl-tRNA synthetase, subunit A K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CLJU_c34410 pheT; phenylalanyl-tRNA synthetase, subunit B K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CLJU_c21290 aspC2; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c13340 aspC1; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c04650 putative aromatic amino acid aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLJU_c14280 predicted aromatic animotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CLJU_c34540 predicted aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D CLJU_c11720 histidinol-phosphate aminotransferase protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLJU_c27610 predicted bifunctional cystathionine gamma-lyase/maltose regulon repressor K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLJU_c21510 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CLJU_c20470 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CLJU_c04490 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CLJU_c09370 ilvE1; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLJU_c08740 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLJU_c26790 predicted pleiotropic regulatory protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:clj00194]
D CLJU_c02440 atpC; F1Fo ATPase, subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CLJU_c02430 atpD; F1Fo ATPase, subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CLJU_c02420 atpG; F1Fo ATPase, subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CLJU_c02410 atpA; F1Fo ATPase, subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CLJU_c02400 atpH; F1Fo ATPase, subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CLJU_c02390 atpF; F1Fo ATPase, subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CLJU_c02380 atpE; F1F0 ATPase, subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CLJU_c02370 atpB; F1Fo ATPase, subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CLJU_c02360 atpI; F1Fo ATPase, subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:clj03000]
D CLJU_c00640 predicted transcription regulatory protein K13653 K13653; AraC family transcriptional regulator
D CLJU_c16170 predicted transcriptional regulator, LysR family K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D CLJU_c38560 transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator
D CLJU_c30860 transcriptional regulator, LysR family K19242 citR; LysR family transcriptional regulator, repressor for citA
D CLJU_c37800 predicted transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D CLJU_c37910 predicted transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D CLJU_c26080 transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D CLJU_c20610 predicted transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CLJU_c26260 transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CLJU_c02490 stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D CLJU_c15770 predicted transcriptional regulator, DeoR family K06608 iolR; DeoR family transcriptional regulator, myo-inositol catabolism operon repressor
D CLJU_c08130 predicted transcription regulator K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D CLJU_c01900 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CLJU_c01230 predicted transcriptional regulator, LacI family K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D CLJU_c06760 predicted transcription regulator K03710 K03710; GntR family transcriptional regulator
D CLJU_c21620 predicted transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CLJU_c13910 predicted transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CLJU_c06820 predicted transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CLJU_c17850 predicted transcriptional regulator with a aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CLJU_c23360 hypothetical protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CLJU_c26190 hypothetical protein with a regulatory domain K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D CLJU_c38610 transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D CLJU_c10510 predicted transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D CLJU_c06730 predicted transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D CLJU_c04150 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CLJU_c26210 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CLJU_c21050 predicted transcriptional regulator, Lrp family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CLJU_c23300 predicted transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D CLJU_c27120 transcriptional regulator K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D CLJU_c18890 predicted transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CLJU_c04360 predicted transcriptional regulator, marR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CLJU_c08700 putative transcriptional regulator BmrR-like, MerR-family K19575 bmrR; MerR family transcriptional regulator, activator of bmr gene
D CLJU_c19410 fur4; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CLJU_c12190 fur2; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CLJU_c16280 fur3; predicted Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CLJU_c06070 fur1; putative Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CLJU_c37710 fur5; predicted ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CLJU_c35550 predicted transcriptional regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D CLJU_c13600 transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D CLJU_c29380 predicted transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D CLJU_c23780 predicted transcription regulator, crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLJU_c10830 crp1; predicted CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLJU_c29570 crp2; regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D CLJU_c12100 putative transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D CLJU_c15640 predicted transcriptional regulator, arsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CLJU_c01860 predicted transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D CLJU_c23140 conserved hypothetical protein with a HTH motif K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D CLJU_c13680 predicted transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D CLJU_c29850 predicted transcriptional regulator K26739 padR; PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulator
D CLJU_c26940 transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D CLJU_c34260 predicted transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D CLJU_c22780 putative transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D CLJU_c34330 predicted transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D CLJU_c32930 predicted transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D CLJU_c16210 predicted transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator
D CLJU_c34350 predicted metal dependent transcriptional regulator K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D CLJU_c13470 predicted transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLJU_c06780 predicted penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLJU_c38720 predicted penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLJU_c25160 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLJU_c13550 hypothetical protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLJU_c18920 predicted transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLJU_c26660 bifunctional protein: biotin operon repressor/biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CLJU_c09320 predicted transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D CLJU_c41800 predicted transcriptional regulator K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D CLJU_c22680 predicted sigma-54-interacting transcription regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJU_c24140 predicted sigma-54-interacting transcription regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJU_c24870 stc2; signal-transduction and transcriptional-control protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJU_c24060 predicted sigma-54-interacting transcription regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJU_c20120 predicted sigma-54-interacting transcription regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJU_c20130 sigma-54-interacting transcription regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJU_c20200 predicted sigma-54-interacting transcription regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJU_c20240 sigma-54-interacting transcription regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJU_c23230 predicted sigma-54-interacting transcription regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJU_c23970 predicted sigma-54-interacting transcription regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJU_c24850 stc1; signal-transduction and transcriptional-control protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJU_c07090 predicted transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJU_c40410 predicted transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJU_c40670 predicted transcription regulatory protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJU_c36950 transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJU_c28220 predicted sugar diacid regulator K02647 cdaR; carbohydrate diacid regulator
D CLJU_c32880 predicted two-component response regulator K06714 rocR; arginine utilization regulatory protein
D CLJU_c37250 transcriptional regulator K01926 rex; redox-sensing transcriptional repressor
D CLJU_c13010 codY; predicted transcriptional repressor CodY K03706 codY; transcriptional pleiotropic repressor
D CLJU_c24800 putative transcriptional regulator K07727 K07727; putative transcriptional regulator
D CLJU_c14060 predicted transcriptional regulator K07727 K07727; putative transcriptional regulator
D CLJU_c19380 conserved protein with HTH domain K07729 K07729; putative transcriptional regulator
D CLJU_c32500 putative DNA binding protein K07729 K07729; putative transcriptional regulator
D CLJU_c31710 putative transcriptional regulator K07729 K07729; putative transcriptional regulator
D CLJU_c32810 predicted transcriptional regulator K07729 K07729; putative transcriptional regulator
D CLJU_c31550 predicted transcriptional regulator K07729 K07729; putative transcriptional regulator
D CLJU_c18490 putative transcriptional regulator K07729 K07729; putative transcriptional regulator
D CLJU_c17620 predicted transcriptional regulator K07729 K07729; putative transcriptional regulator
D CLJU_c00470 hypothetical protein K07729 K07729; putative transcriptional regulator
D CLJU_c03030 putative CopG-family transcriptional regulator K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D CLJU_c24910 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CLJU_c32140 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CLJU_c11470 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CLJU_c23690 predicted purine catabolism PurC-like protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D CLJU_c27960 putative regulatory protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D CLJU_c15250 hypothetical protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D CLJU_c25000 conserved hypothetical protein K23253 putR; PucR family transcriptional regulator, proline-responsive transcriptional activator
D CLJU_c01510 predicted regulators of stationary/sporulation gene expression K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D CLJU_c41700 predicted stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D CLJU_c42870 putative spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLJU_c42890 parB; predicted chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLJU_c09250 predicted arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D CLJU_c11190 argR; predicted arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D CLJU_c07960 hrcA; predicted heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D CLJU_c25410 predicted transcriptional regulator of extracellular enzyme genes K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D CLJU_c41360 ctsR; predicted transcriptional repressor K03708 ctsR; transcriptional regulator of stress and heat shock response
D CLJU_c39160 predicted transcription regulator K05311 cggR; central glycolytic genes regulator
D CLJU_c18110 transcriptional regulator, DeoR family K05346 deoR; deoxyribonucleoside regulator
D CLJU_c10740 pyrR; predicted PyrR bifunctional protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CLJU_c12350 predicted transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D CLJU_c10530 putative protein with a duplicated MraZ domain K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:clj03021]
D CLJU_c40770 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CLJU_c41120 DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CLJU_c41110 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CLJU_c12530 DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CLJU_c08220 rpoD; predicted RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D CLJU_c06810 predicted RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLJU_c16190 predicted RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLJU_c27510 predicted RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLJU_c26490 predicted RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLJU_c15700 predicted sigma 70 subunit of a RNA polymerase K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLJU_c32540 RNA polymerase sigma factor rpoE related protein K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLJU_c36620 predicted RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLJU_c33950 sigF; RNA polymerase sigma-F factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLJU_c12320 sigE; RNA polymerase sigma-E factor precursor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLJU_c12330 sigG; predicted RNA polymerase sigma-G factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLJU_c12260 sigK; predicted RNA polymerase sigma-K factor precursor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLJU_c41230 sigH; RNA polymerase sigma-H factor K27000 sigH; RNA polymerase sigma-H factor
D CLJU_c24530 hypothetical protein with a sigma 70 domain K03093 sigI; RNA polymerase sigma-I factor
D CLJU_c39170 predicted RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CLJU_c10410 RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
D CLJU_c13120 nusA; transcription elongation protein K02600 nusA; transcription termination/antitermination protein NusA
D CLJU_c11120 nusB; nusB-like protein K03625 nusB; transcription antitermination protein NusB
D CLJU_c41170 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CLJU_c02890 putative protein phosphatase with a PAS domain K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D CLJU_c02860 SpoIIAA: Anti-anti-sigma regulatory factor K04749 rsbV; anti-sigma B factor antagonist
D CLJU_c02880 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D CLJU_c11350 putative positive regulator of sigma E activity K03803 rseC; sigma-E factor negative regulatory protein RseC
D CLJU_c26390 greA1; predicted transcription elongation factor K03624 greA; transcription elongation factor GreA
D CLJU_c35450 greA2; predicted transcription elongation factor K03624 greA; transcription elongation factor GreA
D CLJU_c41490 greA3; predicted transcription elongation factor K03624 greA; transcription elongation factor GreA
D CLJU_c02220 transcriptional termination factor rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:clj03019]
D CLJU_c07350 rne; predicted ribonuclease E K08301 rng; ribonuclease G [EC:3.1.26.-]
D CLJU_c12830 dsRNA-specific ribonuclease K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CLJU_c12200 predicted metal-dependent hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CLJU_c13290 conserved hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CLJU_c39090 rnr; predicted ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CLJU_c39020 predicted HD-superfamily hydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D CLJU_c22990 predicted ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJU_c35420 predicted RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJU_c04110 predicted ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJU_c09120 predicted ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJU_c25260 recQ; predicted ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CLJU_c39110 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLJU_c13210 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CLJU_c02220 transcriptional termination factor rho K03628 rho; transcription termination factor Rho
D CLJU_c03250 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJU_c25790 pfk1; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJU_c07980 dnaK; predicted molecular chaperone DnaK, HSP70 family K04043 dnaK; molecular chaperone DnaK
D CLJU_c37190 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLJU_c21210 hfq; predicted RNA-binding protein Hfq K03666 hfq; host factor-I protein
D CLJU_c01520 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D CLJU_c09690 predicted carbon storage regulator K03563 csrA; carbon storage regulator
D CLJU_c09540 predicted carbon storage regulator K03563 csrA; carbon storage regulator
D CLJU_c03190 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:clj03011]
D CLJU_c21320 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945 RP-S1; small subunit ribosomal protein S1
D CLJU_c28540 rspA; predicted 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CLJU_c13020 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CLJU_c40980 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CLJU_c40780 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CLJU_c40870 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CLJU_c42790 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CLJU_c41080 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CLJU_c40900 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CLJU_c40700 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CLJU_c41050 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CLJU_c40790 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CLJU_c41090 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CLJU_c40800 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CLJU_c40910 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CLJU_c13200 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CLJU_c12890 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CLJU_c40950 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CLJU_c42770 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CLJU_c41000 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CLJU_c07900 predicted 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CLJU_c08040 rpsU; predicted 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CLJU_c41150 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CLJU_c41010 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CLJU_c41040 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CLJU_c41030 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CLJU_c40920 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CLJU_c40890 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CLJU_c42730 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CLJU_c41140 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CLJU_c41160 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CLJU_c41130 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CLJU_c40710 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CLJU_c40940 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CLJU_c40850 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CLJU_c40970 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CLJU_c40760 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CLJU_c40880 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CLJU_c12930 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CLJU_c34440 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CLJU_c07360 rplU; predicted 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CLJU_c40990 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CLJU_c41020 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CLJU_c40930 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CLJU_c07380 rpmA; predicted 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CLJU_c12670 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CLJU_c40960 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CLJU_c40860 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CLJU_c02230 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CLJU_c12800 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CLJU_c41190 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CLJU_c42970 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CLJU_c34450 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CLJU_c40810 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CLJU_c41100 ribosomal protein L7Ae-like protein K07590 RP-L7A; large subunit ribosomal protein L7A
D CLJU_c00100 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c28240 rrfH; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c01160 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c41420 rrfI; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c01020 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c06560 rrfF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c01310 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c14950 rrfG; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c06310 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c00080 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c01290 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c14930 rrsG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c06230 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c01000 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c06520 rrsF; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c41440 rrsI; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c01140 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c28260 rrsH; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c06260 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c06550 rrlF; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c01010 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c00090 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c28250 rrlH; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c01300 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c14940 rrlG; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c01150 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c41430 rrlI; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:clj03009]
D CLJU_c12830 dsRNA-specific ribonuclease K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CLJU_c08100 predicted ras-like GTP-binding protein K03595 era; GTPase
D CLJU_c07390 obgE; predicted obgE, GTPase K03979 obgE; GTPase [EC:3.6.5.-]
D CLJU_c13120 nusA; transcription elongation protein K02600 nusA; transcription termination/antitermination protein NusA
D CLJU_c11120 nusB; nusB-like protein K03625 nusB; transcription antitermination protein NusB
D CLJU_c41170 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CLJU_c37000 rsuA; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D CLJU_c01770 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CLJU_c12590 sun; predicted rRNA subunit cytosine-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CLJU_c12710 conserved hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CLJU_c08010 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CLJU_c42900 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CLJU_c10540 mraW; predicted S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CLJU_c01480 corrin/porphyrin methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CLJU_c11170 predicted rRNA methylase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CLJU_c41250 spoU; predicted rRNA methylase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CLJU_c17400 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D CLJU_c12600 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CLJU_c03270 rRNA (uracil-5-)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CLJU_c21360 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CLJU_c17350 rluD2; predicted ribosomal large subunit pseudouridine synthase D K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D CLJU_c10720 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CLJU_c07430 rluD1; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CLJU_c38200 predicted acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CLJU_c00990 ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D CLJU_c12910 rimM; predicted 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D CLJU_c13260 putative MiaB-like tRNA modifying enzyme K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D CLJU_c08000 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CLJU_c07350 rne; predicted ribonuclease E K08301 rng; ribonuclease G [EC:3.1.26.-]
D CLJU_c12170 predicted Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CLJU_c41260 conserved hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D CLJU_c22990 predicted ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJU_c35420 predicted RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJU_c04110 predicted ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJU_c09120 predicted ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJU_c12630 predicted GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CLJU_c12470 engA; putative GTP-binding protein K03977 engA; GTPase
D CLJU_c12950 predicted GTP-binding protein K14540 rbgA; ribosome biogenesis GTPase A
D CLJU_c33910 putative GTP-binding protein K03665 hflX; GTPase
D CLJU_c02290 putative translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CLJU_c26950 putative translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CLJU_c33710 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CLJU_c13160 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CLJU_c13110 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D CLJU_c00030 conserved protein with S4 RNA-binding domain K14761 rlbA; ribosome-associated protein
D CLJU_c08080 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D CLJU_c02620 predicted ribosome-associated protein K05808 hpf; ribosome hibernation promoting factor
D CLJU_c10520 predicted GTP-binding protein K06942 ychF; ribosome-binding ATPase
D CLJU_c12790 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:clj03016]
D CLJU_c26640 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D CLJU_c13390 gluS; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CLJU_c38360 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLJU_c01890 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CLJU_c02750 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLJU_c01730 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CLJU_c26740 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CLJU_c21700 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CLJU_c41480 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CLJU_c33660 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLJU_c12150 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLJU_c06740 asparaginyl-tRNA synthetase related protein K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CLJU_c42030 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CLJU_c41460 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLJU_c34470 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CLJU_c00170 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLJU_c20850 cysS1; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CLJU_c41270 cysS2; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CLJU_c34690 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CLJU_c33670 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CLJU_c34420 pheS; phenylalanyl-tRNA synthetase, subunit A K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CLJU_c34410 pheT; phenylalanyl-tRNA synthetase, subunit B K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CLJU_c34300 tyrS1; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLJU_c38210 tyrS2; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLJU_c38290 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CLJU_c33700 dtd; predicted D-tyrosyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CLJU_c08030 predicted HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CLJU_c29660 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CLJU_c40720 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CLJU_c13180 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CLJU_c14540 nifS1; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJU_c23390 nifS2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJU_c28360 nifS3; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJU_c12110 homocysteine desulfhydrase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJU_c02290 putative translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CLJU_c26950 putative translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CLJU_c21220 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CLJU_c42920 trmE; predicted tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CLJU_c42910 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CLJU_c07460 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CLJU_c27720 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CLJU_c42960 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CLJU_c36860 rpH; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D CLJU_c19830 conserved hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D CLJU_c00760 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CLJU_c41510 dus2; predicted tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D CLJU_c21250 putative MiaB protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CLJU_c08020 predicted oxidoreductase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D CLJU_c12920 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CLJU_c08240 conserved hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D CLJU_c39190 predicted rRNA methylase, SpoU class K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CLJU_c34430 predicted rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family
D CLJU_c23380 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CLJU_c04790 predicted ATPase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D CLJU_c33810 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CLJU_c04020 6-pyruvoyl-tetrahydropterin synthase related protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CLJU_c19210 putative iron-sulfur cluster binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CLJU_c32750 uncharacterized Fe-S protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CLJU_c26330 hypothetical protein with a FE-S domain K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CLJU_c24350 conserved hypothetical protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CLJU_c39290 iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CLJU_c33800 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CLJU_c28350 thiI; predicted thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D CLJU_c41550 tilS; predicted tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CLJU_c38190 putative protease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CLJU_c37400 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CLJU_c38180 putative ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CLJU_c21400 predicted molybdopterin/thiamine biosynthesis protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D CLJU_c12750 conserved hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D CLJU_c39090 rnr; predicted ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CLJU_c13210 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:clj03012]
D CLJU_c13150 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CLJU_c34460 infC2; predicted translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CLJU_c20760 infC1; predicted translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CLJU_c37260 predicted ABC transporter with duplicated ATPase domain K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CLJU_c13030 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D CLJU_c41060 tuf1; elongation factor Tu K02358 tuf; elongation factor Tu
D CLJU_c41200 tuf2; elongation factor Tu K02358 tuf; elongation factor Tu
D CLJU_c41070 translation elongation factor G, Ef-G K02355 fusA; elongation factor G
D CLJU_c41380 translation elongation factor G, Ef-G K02355 fusA; elongation factor G
D CLJU_c07480 selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D CLJU_c27700 selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D CLJU_c02260 prfA; peptide chain release factor 1 (RF-1) K02835 prfA; peptide chain release factor 1
D CLJU_c13050 frr; predicted ribosome recycling factor K02838 frr; ribosome recycling factor
D CLJU_c02250 hemK; predicted modification methylase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CLJU_c41730 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CLJU_c40820 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CLJU_c11010 efp; elongation factor EF-P K02356 efp; elongation factor P
D CLJU_c02640 prfB; peptide chain release factor B K02836 prfB; peptide chain release factor 2
D CLJU_c38280 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:clj03110]
D CLJU_c24730 clpA1; ATP-dependent Clp protease, ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D CLJU_c06170 clpB; chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CLJU_c41330 clpA2; predicted ATPase with chaperone activity K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CLJU_c35630 clpX; ATP-dependent Clp protease, ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CLJU_c19770 heat shock protein htpG, chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D CLJU_c07980 dnaK; predicted molecular chaperone DnaK, HSP70 family K04043 dnaK; molecular chaperone DnaK
D CLJU_c37190 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLJU_c07990 dnaJ; predicted chaperone protein K03686 dnaJ; molecular chaperone DnaJ
D CLJU_c02780 conserved hypothetical protein K03686 dnaJ; molecular chaperone DnaJ
D CLJU_c34600 predicted 33 kDa chaperonin K04083 hslO; molecular chaperone Hsp33
D CLJU_c07970 grpE; predicted heat shock protein K03687 GRPE; molecular chaperone GrpE
D CLJU_c42690 hsp18a; 18 kDa heat shock protein K13993 HSP20; HSP20 family protein
D CLJU_c42700 hsp18b; 18 kDa heat shock protein K13993 HSP20; HSP20 family protein
D CLJU_c37200 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D CLJU_c41740 predicted serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CLJU_c08430 predicted serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CLJU_c06110 ftsH1; predicted cell division protein FtsH-like protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLJU_c38350 ftsH2; predicted ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLJU_c41530 ftsH3; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLJU_c02370 atpB; F1Fo ATPase, subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CLJU_c25460 torD; predicted cytoplasmic chaperone TorD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D CLJU_c22890 rotA; peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CLJU_c41710 prsA; foldase protein precursor K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D CLJU_c01180 putative foldase related protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D CLJU_c27320 thioredoxin K03671 TXN; thioredoxin
D CLJU_c27800 thioredoxin K03671 TXN; thioredoxin
D CLJU_c40500 trx; predicted thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:clj04131]
D CLJU_c15660 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CLJU_c39150 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLJU_c03260 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLJU_c19770 heat shock protein htpG, chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:clj03051]
D CLJU_c19770 heat shock protein htpG, chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:clj03032]
D CLJU_c41670 hup; predicted DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CLJU_c00010 dnaA; predicted chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D CLJU_c42710 predicted DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CLJU_c42230 putative DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC
D CLJU_c08210 dnaG; predicted DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CLJU_c10150 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CLJU_c42780 ssb3; predicted single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLJU_c03240 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLJU_c30690 polC; DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLJU_c00020 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLJU_c07890 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLJU_c01410 DNA polymerase related protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLJU_c19140 predicted exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLJU_c36230 putative exonuclease with a BRCT domain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLJU_c36410 predicted DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLJU_c00850 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLJU_c12960 predicted ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CLJU_c33610 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLJU_c36970 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLJU_c30980 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CLJU_c00070 gyrA1; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CLJU_c00060 gyrB1; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CLJU_c09200 gyrA2; DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CLJU_c09190 gyrB2; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CLJU_c13000 topA1; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CLJU_c22980 topA2; DNA topoisomerase I K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CLJU_c23470 topA3; DNA topoisomerase I K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:clj03036]
D CLJU_c12830 dsRNA-specific ribonuclease K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CLJU_c41670 hup; predicted DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CLJU_c00010 dnaA; predicted chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D CLJU_c21210 hfq; predicted RNA-binding protein Hfq K03666 hfq; host factor-I protein
D CLJU_c04150 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CLJU_c26210 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CLJU_c21050 predicted transcriptional regulator, Lrp family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CLJU_c12850 smc; predicted chromosome segregation protein K03529 smc; chromosome segregation protein
D CLJU_c11290 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D CLJU_c11300 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D CLJU_c12290 ftsA1; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CLJU_c03070 ftsE; predicted ATPase involved in cell division K09812 ftsE; cell division transport system ATP-binding protein
D CLJU_c13250 ftsK; predicted DNA translocase K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CLJU_c10550 conserved hypothetical protein K03586 ftsL; cell division protein FtsL
D CLJU_c10610 ftsQ; cell division protein K03589 ftsQ; cell division protein FtsQ
D CLJU_c10600 ftsW1; predicted cell division protein K03588 ftsW; cell division protein FtsW
D CLJU_c03080 putative cell division protein K09811 ftsX; cell division transport system permease protein
D CLJU_c12300 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CLJU_c34400 conserved hypothetical protein K09888 zapA; cell division protein ZapA
D CLJU_c01880 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c39200 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c17000 predicted cell wall binding protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c31080 putative cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c40690 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c05110 predicted cell wall binding protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c05120 predicted cell wall binding protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c22260 predicted transporter protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CLJU_c05950 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CLJU_c07260 minC; predicted septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CLJU_c07270 minD; predicted septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D CLJU_c07280 minE; predicted septum formation topological specificity factor K03608 minE; cell division topological specificity factor
D CLJU_c10690 predicted cell-division initiation protein (divIVA) K04074 divIVA; cell division initiation protein
D CLJU_c10660 conserved hypothetical protein K09772 sepF; cell division inhibitor SepF
D CLJU_c02500 MreB/Mbl protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CLJU_c07220 mreB; predicted rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CLJU_c07230 mreC; predicted rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D CLJU_c07240 putative rod shape determining protein MreD K03571 mreD; rod shape-determining protein MreD
D CLJU_c07290 rodA; predicted rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D CLJU_c17020 ftsW2; predicted cell division membrane protein K05837 rodA; rod shape determining protein RodA
D CLJU_c42880 parA; predicted chromosome partitioning protein K03496 parA; chromosome partitioning protein
D CLJU_c42870 putative spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLJU_c42890 parB; predicted chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLJU_c09200 gyrA2; DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CLJU_c09190 gyrB2; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CLJU_c42910 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CLJU_c42900 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CLJU_c26830 putative integrase/recombinase K04763 xerD; integrase/recombinase XerD
D CLJU_c14790 putative integrase/recombinase K04763 xerD; integrase/recombinase XerD
D CLJU_c21010 predicted site-specific recombinase K04763 xerD; integrase/recombinase XerD
D CLJU_c11260 xerD; predicted integrase/recombinase XerD K04763 xerD; integrase/recombinase XerD
D CLJU_c16540 predicted tyrosine recombinase K04763 xerD; integrase/recombinase XerD
D CLJU_c09770 phage related integrase K04763 xerD; integrase/recombinase XerD
D CLJU_c09790 putative integrase/recombinase K04763 xerD; integrase/recombinase XerD
D CLJU_c41680 conserved hypothetical protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D CLJU_c35610 engB; predicted GTP-binding protein K03978 engB; GTP-binding protein
D CLJU_c03210 conserved hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:clj03400]
D CLJU_c17870 methylated-DNA--protein-cysteinemethyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CLJU_c01950 predicted 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CLJU_c37230 putative 8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D CLJU_c39270 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CLJU_c15020 putative NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CLJU_c14320 putative 7,8-dihydro-8-oxoguanine-triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CLJU_c10140 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CLJU_c01120 predicted Uracil DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CLJU_c01720 predicted phage related DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CLJU_c36310 predicted methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CLJU_c20270 predicted endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CLJU_c09240 recJ1; single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLJU_c36970 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLJU_c33610 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLJU_c03120 uvrA1; excinuclease ABC, subunit A K03701 uvrA; excinuclease ABC subunit A
D CLJU_c14750 uvrA2; predicted excinuclease ABC, subunit A K03701 uvrA; excinuclease ABC subunit A
D CLJU_c03110 uvrB; excinuclease ABC, subunit B K03702 uvrB; excinuclease ABC subunit B
D CLJU_c03170 uvrC; excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C
D CLJU_c30170 predicted ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJU_c21950 predicted helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJU_c14310 predicted helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJU_c28400 putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJU_c16530 predicted ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJU_c38340 predicted ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJU_c36980 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJU_c41120 DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CLJU_c41110 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CLJU_c40770 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CLJU_c12530 DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CLJU_c41720 mfd; predicted transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CLJU_c21240 mutS1; predicted DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CLJU_c34380 DNA mismatch repair MutS related protein K07456 mutS2; DNA mismatch repair protein MutS2
D CLJU_c15050 MutS related protein K07456 mutS2; DNA mismatch repair protein MutS2
D CLJU_c21230 mutL1; predicted DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CLJU_c11130 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CLJU_c11140 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CLJU_c03240 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLJU_c30690 polC; DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLJU_c00020 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLJU_c07890 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLJU_c01410 DNA polymerase related protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLJU_c19140 predicted exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLJU_c36230 putative exonuclease with a BRCT domain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLJU_c36410 predicted DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLJU_c00850 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLJU_c10150 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CLJU_c42780 ssb3; predicted single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLJU_c30980 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CLJU_c02590 recD; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CLJU_c13280 recA; recombinase RecA K03553 recA; recombination protein RecA
D CLJU_c33830 ruvA; Holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D CLJU_c33820 ruvB; Holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CLJU_c12550 predicted primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CLJU_c31640 phage-related protein K03546 sbcC; DNA repair protein SbcC/Rad50
D CLJU_c20320 sbcCD; predicted nuclease sbcCD, subunit C K03546 sbcC; DNA repair protein SbcC/Rad50
D CLJU_c20310 sbcD; predicted exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D CLJU_c41320 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D CLJU_c00040 recF; predicted DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CLJU_c12700 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLJU_c05370 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLJU_c08110 recO; predicted DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
D CLJU_c00870 recR; predicted recombination protein RecR K06187 recR; recombination protein RecR
D CLJU_c11200 recN; predicted DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CLJU_c33160 predicted ATP-dependent exonuclease K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D CLJU_c06980 addB; predicted ATP-dependent nuclease, subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D CLJU_c00070 gyrA1; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CLJU_c00060 gyrB1; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CLJU_c13000 topA1; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CLJU_c41670 hup; predicted DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CLJU_c31630 phage-related protein K07455 recT; recombination protein RecT
D CLJU_c25260 recQ; predicted ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CLJU_c21040 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CLJU_c21030 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CLJU_c36670 predicted transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D CLJU_c35400 putative regulatory protein K03565 recX; regulatory protein
D CLJU_c06840 predicted ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CLJU_c13170 putative phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:clj03029]
D CLJU_c13150 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CLJU_c34460 infC2; predicted translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CLJU_c20760 infC1; predicted translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CLJU_c13030 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D CLJU_c41060 tuf1; elongation factor Tu K02358 tuf; elongation factor Tu
D CLJU_c41200 tuf2; elongation factor Tu K02358 tuf; elongation factor Tu
D CLJU_c41070 translation elongation factor G, Ef-G K02355 fusA; elongation factor G
D CLJU_c41380 translation elongation factor G, Ef-G K02355 fusA; elongation factor G
D CLJU_c19070 predicted ATP-dependent RNA helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D CLJU_c08100 predicted ras-like GTP-binding protein K03595 era; GTPase
D CLJU_c34300 tyrS1; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLJU_c38210 tyrS2; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLJU_c02750 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLJU_c33660 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLJU_c41460 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLJU_c21700 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CLJU_c36920 gatA; glutamyl-tRNA amidotransferase, subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CLJU_c36910 gatB; glutamyl-tRNA amidotransferase, subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CLJU_c36930 gatC; glutamyl-tRNA amidotransferase, subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CLJU_c10150 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CLJU_c42780 ssb3; predicted single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLJU_c07980 dnaK; predicted molecular chaperone DnaK, HSP70 family K04043 dnaK; molecular chaperone DnaK
D CLJU_c07970 grpE; predicted heat shock protein K03687 GRPE; molecular chaperone GrpE
D CLJU_c37190 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLJU_c37200 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D CLJU_c07990 dnaJ; predicted chaperone protein K03686 dnaJ; molecular chaperone DnaJ
D CLJU_c02780 conserved hypothetical protein K03686 dnaJ; molecular chaperone DnaJ
D CLJU_c14540 nifS1; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJU_c23390 nifS2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJU_c28360 nifS3; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJU_c12110 homocysteine desulfhydrase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJU_c26750 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLJU_c42940 oxaA; predicted membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLJU_c19770 heat shock protein htpG, chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:clj02000]
D CLJU_c18900 predicted ABC-type transporter, transmembrane component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJU_c08910 predicted ABC-type multidrug/protein/lipid transport system, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJU_c26230 predicted transport protein, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJU_c15170 ABC transporter related, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJU_c08920 predicted ABC-type multidrug/protein/lipid transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJU_c15180 predicted ABC transporter, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJU_c26240 predicted transport protein, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJU_c18910 predicted ABC-type transporter, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJU_c22500 predicted ABC transporter, ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CLJU_c19020 predicted ABC transporter with duplicated ATPase domain K18231 msr; macrolide transport system ATP-binding/permease protein
D CLJU_c08390 predicted ATPase component of ABC transporter K15738 uup; ABC transport system ATP-binding/permease protein
D CLJU_c26020 predicted ABC-type molybdenum transport system, solute-binding component K02020 modA; molybdate transport system substrate-binding protein
D CLJU_c22170 modA1; predicted molybdate-binding extracellular protein precursor K02020 modA; molybdate transport system substrate-binding protein
D CLJU_c38100 modA2; predicted ABC-type molybdate transport system, periplasmic component K02020 modA; molybdate transport system substrate-binding protein
D CLJU_c22160 modB; predicted molybdate-binding extracellular protein precursor K02018 modB; molybdate transport system permease protein
D CLJU_c38090 modC; predicted molybdate ABC transporter, permease component K02018 modB; molybdate transport system permease protein
D CLJU_c38080 predicted ABC transporter, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CLJU_c22150 putative molybdate ABC transporter, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CLJU_c20140 predicted ABC transport system, periplasmic component K05772 tupA; tungstate transport system substrate-binding protein
D CLJU_c20150 predicted ABC transport system, permease protein K05773 tupB; tungstate transport system permease protein
D CLJU_c20160 predicted ABC-type transport system, ATPase component K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D CLJU_c18330 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CLJU_c18310 predicted ABC nitrate/sulfonate/bicarbonate family transporter, permease component K15554 ssuC; sulfonate transport system permease protein
D CLJU_c18320 predicted ABC nitrate/sulfonate/bicarbonate family transporter, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CLJU_c21730 putative spermidine/putrescine ABC transporter, periplasmic component K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CLJU_c21740 putative spermidine/putrescine ABC transporter, permease component K11070 potC; spermidine/putrescine transport system permease protein
D CLJU_c21750 putative spermidine/putrescine ABC transporter, permease component K11071 potB; spermidine/putrescine transport system permease protein
D CLJU_c21760 putative spermidine/putrescine ABC transporter, ATPase component K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CLJU_c26130 predicted ABC transporter, substrate-binding component K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CLJU_c26300 predicted extracellular solute binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CLJU_c26150 predicted ABC transporter, permease component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CLJU_c26280 predicted ABC transporter, permease component K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CLJU_c26160 predicted ABC transporter, permease component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CLJU_c26290 predicted ABC transporter, permease component K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CLJU_c26140 predicted ABC transporter, ATPase component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CLJU_c26270 predicted ABC transporter, ATPase component K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CLJU_c25380 predicted ABC transporter K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D CLJU_c25390 putative ABC transporter, permease component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D CLJU_c25400 predicted ABC transporter, ATPase component K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D CLJU_c26530 predicted transporter protein, periplasmic component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CLJU_c34710 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CLJU_c08800 predicted ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CLJU_c08790 predicted ABC nitrate/sulfonate/bicarbonate family transporter, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CLJU_c35350 predicted ABC transporter, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CLJU_c26520 predicted ABC transporter, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CLJU_c35340 predicted ABC transporter, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CLJU_c26510 predicted ABC transporter, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CLJU_c08810 predicted ABC transporter, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CLJU_c34110 predicted maltose-binding extracellular protein precursor K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D CLJU_c35560 conserved hypothetical protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D CLJU_c08950 rbsB; predicted ABC-type sugar transport system, periplasmic component K10540 mglB; methyl-galactoside transport system substrate-binding protein
D CLJU_c01260 predicted ABC-Type sugar transporter, periplasmic component K10439 rbsB; ribose transport system substrate-binding protein
D CLJU_c01280 putative ABC-type sugar transporter, permease component K10440 rbsC; ribose transport system permease protein
D CLJU_c01270 putative ABC-type sugar transporter, ATPase component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CLJU_c34870 putative ABC-type sugar transporter, periplasmic component K23508 ytfQ; galactofuranose transport system substrate-binding protein
D CLJU_c34840 predicted ABC-type sugar transport system, permease component K23509 ytfT; galactofuranose transport system permease protein
D CLJU_c34850 predicted ABC-type sugar transport system, permease component K23509 ytfT; galactofuranose transport system permease protein
D CLJU_c34860 putative ABC-type sugar transport system, ATPase component K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D CLJU_c30000 bmp; putative basic membrane protein K07335 bmpA; basic membrane protein A and related proteins
D CLJU_c39630 predicted ABC-type transporter, tperiplasmic component K07335 bmpA; basic membrane protein A and related proteins
D CLJU_c29980 predicted ABC-type transporter, permease component K23535 nupB; general nucleoside transport system permease protein
D CLJU_c39610 predicted ABC-type transporter, permease component K23535 nupB; general nucleoside transport system permease protein
D CLJU_c39600 predicted ABC-transporter, permease component K23536 nupC; general nucleoside transport system permease protein
D CLJU_c29970 predicted ABC-type transporter, permease component K23536 nupC; general nucleoside transport system permease protein
D CLJU_c39620 predicted ABC-type transporter, ATPase component K23537 nupA; general nucleoside transport system ATP-binding protein
D CLJU_c29990 predicted ABC-type transporter, ATPase component K23537 nupA; general nucleoside transport system ATP-binding protein
D CLJU_c01980 predicted solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CLJU_c12390 pstS; predicted extracellular phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CLJU_c12400 pstC; predicted phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D CLJU_c12410 pstA; predicted phosphate transport system permease protein K02038 pstA; phosphate transport system permease protein
D CLJU_c12420 pstB; phosphate import ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CLJU_c06300 putative ABC-type transporter, periplasmic component K02073 metQ; D-methionine transport system substrate-binding protein
D CLJU_c32100 putative ABC-type metal ion transport system, periplasmic component K02073 metQ; D-methionine transport system substrate-binding protein
D CLJU_c27660 predicted ABC-type transporter, periplasmic component K02073 metQ; D-methionine transport system substrate-binding protein
D CLJU_c04610 predicted ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D CLJU_c06290 predicted ABC-type transporter, permease component K02072 metI; D-methionine transport system permease protein
D CLJU_c27670 predicted ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D CLJU_c04600 predicted ABC transporter, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D CLJU_c06280 predicted ABC-type transporter, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D CLJU_c27680 predicted ABC transporter, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D CLJU_c28960 predicted ABC transport system, periplasmic solute-binding component K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D CLJU_c27620 predicted ABC transport system, periplasmic solute-binding component K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D CLJU_c28950 predicted ABC-type aminoacid transporter, permease component K16962 yxeN; putative S-methylcysteine transport system permease protein
D CLJU_c27630 predicted ABC-type aminoacid transporter, permease component K16962 yxeN; putative S-methylcysteine transport system permease protein
D CLJU_c28940 predicted ABC-type transporter, ATPase component K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D CLJU_c27640 putative ABC-type polar amino acid transport system, ATPase component K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D CLJU_c06670 predicted extracellular amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CLJU_c25010 predicted extracellular amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CLJU_c33130 predicted ABC-type aminoacid transporter, periplasmic solute-binding component K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CLJU_c33140 predicted ABC-type aminoacid transporter, permease component K02029 ABC.PA.P; polar amino acid transport system permease protein
D CLJU_c06680 predicted amino acid ABC transporter, permease component K02029 ABC.PA.P; polar amino acid transport system permease protein
D CLJU_c06690 predicted amino acid transporter, ATPase component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CLJU_c36890 predicted ABC-type peptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CLJU_c22540 predicted peptide ABC transporter, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLJU_c22580 predicted peptide ABC transporter, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLJU_c12040 dppA; predicted ABC-type dipeptide transport system K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLJU_c22670 predicted peptide ABC transporter, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLJU_c22660 predicted peptide ABC transporter, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLJU_c12050 dppB; predicted ABC-type dipeptide transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLJU_c22600 predicted peptide ABC transporter, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLJU_c22590 predicted peptide ABC transporter, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLJU_c12060 dppC; predicted ABC-type dipeptide transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLJU_c22650 predicted peptide ABC transporter, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLJU_c22570 predicted peptide ABC transporter, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLJU_c22640 predicted peptide ABC transporter, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLJU_c12070 dppD; predicted ABC-type dipeptide transport system, ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLJU_c12080 dppF; predicted ABC-type dipeptide transport system, ATPase component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CLJU_c22560 predicted peptide ABC transporter, ATPase component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D CLJU_c17200 predicted ABC transporter K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLJU_c20090 predicted iron(III) ABC transporter, solute-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLJU_c17100 predicted ABC transporter K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLJU_c17120 predicted ABC transporter K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLJU_c17150 predicted ABC transporter K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLJU_c17180 predicted ABC transporter K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLJU_c17250 predicted ABC transporter K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLJU_c38000 hemV1; predicted metal ion (Fe 3+) ABC transporter, ATPase component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLJU_c38020 hemV2; predicted metal ion (Fe 3+) ABC transporter, ATPase component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLJU_c20080 predicted ABC-type iron (III) transport system, permease component K02015 ABC.FEV.P; iron complex transport system permease protein
D CLJU_c17130 predicted ABC transporter, permease component K02015 ABC.FEV.P; iron complex transport system permease protein
D CLJU_c38040 predicted iron ABC transporter, permease component K02015 ABC.FEV.P; iron complex transport system permease protein
D CLJU_c20070 predicted ABC-type iron (III) transport system, ATPase component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CLJU_c17160 predicted ABC transporter, ATPase component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CLJU_c38030 predicted iron ABC transporter, ATPase component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CLJU_c05820 predicted ABC-type Fe3+ transport system periplasmic component K25034 btuF; cobalamin transport system substrate-binding protein
D CLJU_c05830 predicted ABC-type Fe3+-siderophore transport system, permease component K25027 btuC; cobalamin transport system permease protein
D CLJU_c05840 predicted ABC-type Fe3+ transport system, ATPase component K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D CLJU_c22200 predicted metal binding protein precursor K09815 znuA; zinc transport system substrate-binding protein
D CLJU_c37880 predicted metal binding protein K09815 znuA; zinc transport system substrate-binding protein
D CLJU_c31800 predicted metal ABC transporter, permease component K09816 znuB; zinc transport system permease protein
D CLJU_c31790 predicted metal ABC transporter, ATPase component K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CLJU_c22220 predicted membrane protein K02009 cbiN; cobalt/nickel transport protein
D CLJU_c28600 cbiQ1; predicted cobalt transport system, permease subunit K02008 cbiQ; cobalt/nickel transport system permease protein
D CLJU_c32040 putative cobalt permease K02008 cbiQ; cobalt/nickel transport system permease protein
D CLJU_c22230 cbiM1; predicted cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CLJU_c33200 cbiM2; predicted cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CLJU_c28590 putative ABC-type cobalt transport protein, ATPase component K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CLJU_c32030 putative ABC-type cobalt transport protein, ATPase component K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CLJU_c24470 putative biotin biosynthesis protein K03523 bioY; biotin transport system substrate-specific component
D CLJU_c22300 putative metal ion ABC transporter, membrane-spanning subunit K16927 cbrT; energy-coupling factor transport system substrate-specific component
D CLJU_c40730 cbiQ2; predicted ABC-type cobalt transport system, permease component K16785 ecfT; energy-coupling factor transport system permease protein
D CLJU_c22320 predicted ABC cobalt transport protein, permease component K16785 ecfT; energy-coupling factor transport system permease protein
D CLJU_c40750 cbiO3; predicted ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLJU_c40740 cbiO2; predicted ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLJU_c22310 cbiO1; predicted ABC cobalt transport protein, ATPase component K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLJU_c38160 predicted metal ion transporter K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D CLJU_c15070 predicted Na+ ABC transporter, permease component K09696 natB; sodium transport system permease protein
D CLJU_c15080 putative Na+ ABC transporter, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D CLJU_c13790 predicted ABC transporter, ATPase component K20459 nukF; lantibiotic transport system ATP-binding protein
D CLJU_c13800 putative permease K20460 nukE; lantibiotic transport system permease protein
D CLJU_c13810 predicted ABC transporter, permease component K20461 nukG; lantibiotic transport system permease protein
D CLJU_c09150 predicted permease K20491 nisE; lantibiotic transport system permease protein
D CLJU_c37420 predicted transporter protein K20491 nisE; lantibiotic transport system permease protein
D CLJU_c22930 predicted permease K20491 nisE; lantibiotic transport system permease protein
D CLJU_c09160 putative permease K20492 nisG; lantibiotic transport system permease protein
D CLJU_c37430 predicted transporter protein K20492 nisG; lantibiotic transport system permease protein
D CLJU_c22940 predicted permease K20492 nisG; lantibiotic transport system permease protein
D CLJU_c37410 predicted ABC transporter, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D CLJU_c09140 predicted ABC transporter, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D CLJU_c22920 predicted ABC transporter, ATP-binding component K20490 nisF; lantibiotic transport system ATP-binding protein
D CLJU_c06470 predicted transporter protein K19310 bcrB; bacitracin transport system permease protein
D CLJU_c06480 predicted ABC transporter, permease component K19310 bcrB; bacitracin transport system permease protein
D CLJU_c00790 putative ABC transporter, permease component K19310 bcrB; bacitracin transport system permease protein
D CLJU_c00780 predicted transporter protein K19310 bcrB; bacitracin transport system permease protein
D CLJU_c06490 predicted ABC transporter, ATPase component K19309 bcrA; bacitracin transport system ATP-binding protein
D CLJU_c00800 predicted ABC transporter, ATPase component K19309 bcrA; bacitracin transport system ATP-binding protein
D CLJU_c30150 putative permease K11632 bceB; bacitracin transport system permease protein
D CLJU_c14430 putative transporter protein K11632 bceB; bacitracin transport system permease protein
D CLJU_c14420 predicted ABC transporter, ATPase component K11631 bceA; bacitracin transport system ATP-binding protein
D CLJU_c30160 predicted ABC transporter, ATPase component K11631 bceA; bacitracin transport system ATP-binding protein
D CLJU_c14250 predicted ABC transporter, permease component K19084 braE; bacitracin transport system permease protein
D CLJU_c14240 predicted ABC transporter, ATPase component K19083 braD; bacitracin transport system ATP-binding protein
D CLJU_c05650 putative ABC-type transport system K09808 lolC_E; lipoprotein-releasing system permease protein
D CLJU_c05660 predicted ABC transporter, ATPase component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CLJU_c03080 putative cell division protein K09811 ftsX; cell division transport system permease protein
D CLJU_c03070 ftsE; predicted ATPase involved in cell division K09812 ftsE; cell division transport system ATP-binding protein
D CLJU_c27060 predicted membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJU_c35260 predicted membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJU_c35270 putative transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJU_c23260 uncharacterized membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJU_c25690 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJU_c04570 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJU_c33000 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJU_c05030 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJU_c35200 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJU_c24650 putative ABC-type transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJU_c18360 predicted ABC transporter, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJU_c07770 conserved membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJU_c15380 predicted membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJU_c15390 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJU_c15400 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJU_c19660 putative ABC transporter related membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJU_c25880 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJU_c35210 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJU_c27130 predicted ABC transporter, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJU_c25120 predicted ABC transporter, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJU_c35280 predicted ABC transporter, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJU_c25890 predicted ABC transporter, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJU_c23250 predicted ABC transporter, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJU_c25710 predicted ABC transporter, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJU_c05040 predicted ABC transporter, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJU_c33010 predicted ABC transporter, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJU_c04580 predicted ABC transporter, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJU_c26860 ABC-type transporter, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJU_c24670 fusion of ABC transport protein and transcriptional regulator, LytT family K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJU_c07760 predicted ABC transporter, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJU_c19650 predicted ABC transporter, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJU_c24660 predicted ABC transporter, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJU_c27070 predicted ABC transporter, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJU_c37280 predicted ABC transporter, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJU_c18350 predicted ABC transporter, ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJU_c35190 predicted ABC transporter, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJU_c01080 predicted ABC-type transporter, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CLJU_c07690 predicted ABC type transporter, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CLJU_c07790 putative permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CLJU_c25780 predicted permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CLJU_c15500 predicted ABC transporter, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CLJU_c14290 predicted permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CLJU_c27200 predicted permease with domain duplication K02004 ABC.CD.P; putative ABC transport system permease protein
D CLJU_c18100 putative ABC transporter, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CLJU_c39990 putative ABC transporter, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CLJU_c38620 putative permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CLJU_c01070 predicted ABC transporter, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLJU_c07680 predicted ABC transporter, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLJU_c07780 predicted ABC transporter, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLJU_c15490 predicted ABC transporter, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLJU_c14300 predicted ABC transporter, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLJU_c27190 predicted ABC transporter, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLJU_c18090 putative ABC transporter, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLJU_c38630 predicted ABC transporter, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLJU_c40000 predicted ABC transporter, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLJU_c25770 predicted ABC transporter, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLJU_c26910 predicted ABC-type transport system, ATPase component K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CLJU_c37940 sufC; predicted ABC-type transport system, ATPAse component K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CLJU_c27110 predicted Na+-driven efflux pump K18908 mepA; MATE family, multidrug efflux pump
D CLJU_c16260 predicted efflux pump K26937 dinF; MATE family, multidrug efflux pump
D CLJU_c22520 putative Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D CLJU_c40120 predicted Na+ driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D CLJU_c33100 predicted Na+ driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D CLJU_c15230 putative Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D CLJU_c08450 predicted Na+ driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D CLJU_c14190 predicted Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D CLJU_c15780 predicted substrate transporter K06609 iolT; MFS transporter, SP family, major inositol transporter
D CLJU_c42580 predicted transporter protein K06610 iolF; MFS transporter, SP family, inositol transporter
D CLJU_c14820 major facilitator family transporter K13021 ttuB; MFS transporter, ACS family, tartrate transporter
D CLJU_c28120 predicted MFS-transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D CLJU_c28710 predicted transporter protein, MFS family K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D CLJU_c24790 predicted cyanate permease K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D CLJU_c16340 putative cyanate permease K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D CLJU_c23740 predicted permease K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D CLJU_c14140 putative permease K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D CLJU_c35770 predicted transport protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D CLJU_c32230 predicted permease K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D CLJU_c19740 putative multidrug resistance efflux pump K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D CLJU_c08160 predicted permease K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D CLJU_c04680 predicted permease, major facilitator superfamily K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D CLJU_c37160 predicted permease K18214 tetP_A; MFS transporter, DHA3 family, tetracycline resistance protein
D CLJU_c21140 predicted transporter protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D CLJU_c21120 predicted transporter protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D CLJU_c40530 pts1; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CLJU_c13350 ptsH; predicted phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D CLJU_c26070 phosphoenolpyruvate: sugar phosphotransferase system (PTS), fructose/mannose specific IIA subunit K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D CLJU_c20590 fructose-specific PTS (phosphotransferase system) system enzyme IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CLJU_c26050 PTS family enzyme IIB K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D CLJU_c26060 PTS family enzyme IIC K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D CLJU_c15570 glpF; predicted glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D CLJU_c11890 predicted major intrinsic protein, aquaporin K02440 glpF; glycerol uptake facilitator
D CLJU_c05890 putative ion transport protein K10716 kch; voltage-gated potassium channel
D CLJU_c04040 predicted ammonium transporter K03320 amt; ammonium transporter, Amt family
D CLJU_c05730 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D CLJU_c23310 conserved hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D CLJU_c37490 predicted formate/nitrite transporter K21993 fdhC; formate transporter
D CLJU_c42810 putative mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D CLJU_c15990 predicted divalent cation transporter K06213 mgtE; magnesium transporter
D CLJU_c01450 motA1; chemotaxis protein K02556 motA; chemotaxis protein MotA
D CLJU_c19720 motA2; predicted flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D CLJU_c01460 motB1; predicted flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CLJU_c19710 motB2; predicted flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CLJU_c01360 putative Mg2+ transporter protein K03284 corA; magnesium transporter
D CLJU_c09130 predicted Mg2+ and Co2+ transport system K03284 corA; magnesium transporter
D CLJU_c21890 corA; putative magnesium and cobalt transport protein K03284 corA; magnesium transporter
D CLJU_c23330 putative CrcB protein K06199 crcB; fluoride exporter
D CLJU_c23340 putative CrcB protein K06199 crcB; fluoride exporter
D CLJU_c28430 conserved protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CLJU_c22330 predicted cell wall binding protein K21449 ata; trimeric autotransporter adhesin
D CLJU_c30320 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D CLJU_c26030 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D CLJU_c04840 predicted cell wall binding protein K21449 ata; trimeric autotransporter adhesin
D CLJU_c04990 putative surface-layer protein K21449 ata; trimeric autotransporter adhesin
D CLJU_c10070 putative surface-layer protein K21449 ata; trimeric autotransporter adhesin
D CLJU_c33090 conserved hypothetical protein K06518 cidA; holin-like protein
D CLJU_c24360 predicted lysine-specific permease K11733 lysP; lysine-specific permease
D CLJU_c21810 predicted amino acid permease K11733 lysP; lysine-specific permease
D CLJU_c04180 predicted amino acid ABC transporter K11735 gabP; GABA permease
D CLJU_c08330 aroP; predicted amino acid transport protein K11737 cycA; D-serine/D-alanine/glycine transporter
D CLJU_c28050 predicted amino acid permease K02205 rocE; arginine/ornithine permease
D CLJU_c09290 predicted arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D CLJU_c27990 predicted arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D CLJU_c42500 predicted aminoacid permease K20265 gadC; glutamate:GABA antiporter
D CLJU_c08510 grkB1; spore germination protein K06296 gerKB; spore germination protein KB
D CLJU_c16440 grkB2; predicted spore germination protein K06296 gerKB; spore germination protein KB
D CLJU_c38990 gerAB2; spore germination protein, GerAB K06296 gerKB; spore germination protein KB
D CLJU_c39060 spore germination protein KB K06296 gerKB; spore germination protein KB
D CLJU_c39070 spore germination protein KB K06296 gerKB; spore germination protein KB
D CLJU_c38860 gerAB1; predicted spore germination protein GerAB K06296 gerKB; spore germination protein KB
D CLJU_c35980 predicted spore germination protein K06296 gerKB; spore germination protein KB
D CLJU_c18450 gerKB; predicted spore germination protein K06311 yndE; spore germination protein
D CLJU_c19780 potE; predicted aminoacid transporter PotE K16263 yjeH; amino acid efflux transporter
D CLJU_c02280 predicted zinc transporter K07238 TC.ZIP; zinc transporter, ZIP family
D CLJU_c04090 predicted transporter protein K18303 mexK; multidrug efflux pump
D CLJU_c07600 predicted transporter protein K18303 mexK; multidrug efflux pump
D CLJU_c15440 predicted multidrug resistance protein, Smr family K03297 emrE; small multidrug resistance pump
D CLJU_c17550 predicted small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D CLJU_c31000 predicted small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D CLJU_c37030 predicted small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D CLJU_c38490 predicted small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D CLJU_c01620 predicted small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D CLJU_c20260 predicted membrane protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D CLJU_c42060 conserved membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLJU_c28160 high-affinity transport of gluconate - gluconate permease K06155 gntT; Gnt-I system high-affinity gluconate transporter
D CLJU_c11600 predicted high affinity gluconate/H+ symporter K06155 gntT; Gnt-I system high-affinity gluconate transporter
D CLJU_c00620 putative gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D CLJU_c21610 predicted lactate permease K03303 lutP; lactate permease
D CLJU_c27820 choline/carnitine/betaine transporter protein K05020 opuD; glycine betaine transporter
D CLJU_c27340 choline/carnitine/betaine transporter protein K05020 opuD; glycine betaine transporter
D CLJU_c04130 predicted Ca2+/Na+ antiporter K07301 yrbG; cation:H+ antiporter
D CLJU_c20790 predicted sodium:dicarboxylate symporter K11102 gltP; proton glutamate symport protein
D CLJU_c08880 nhaC; predicted Na(+)/H(+) antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D CLJU_c40350 predicted Na+/H+ antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D CLJU_c08970 napA; predicted Na(+)/H(+) antiporter K26730 napA; Na+:H+ antiporter
D CLJU_c27940 predicted purine permease K10974 codB; cytosine permease
D CLJU_c10730 predicted uracil permease K02824 uraA; uracil permease
D CLJU_c23580 predicted uracil permease K02824 uraA; uracil permease
D CLJU_c23850 putative xanthine/uracil permease K16169 pbuX; xanthine permease
D CLJU_c08480 putative permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D CLJU_c23950 predicted permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D CLJU_c18140 predicted concentrative nucleoside transporter K11535 nupC; nucleoside transport protein
D CLJU_c23240 putative voltage-gated ClC-type chloride channel clcA K03281 clcA; chloride channel protein, CIC family
D CLJU_c17570 putative chromate transporter K07240 chrA; chromate transporter
D CLJU_c17580 predicted membrane protein K07240 chrA; chromate transporter
D CLJU_c36160 putative chromate transporter K07240 chrA; chromate transporter
D CLJU_c36170 putative chromate transporter K07240 chrA; chromate transporter
D CLJU_c34340 predicted manganese/divalent cation transporter K03322 mntH; manganese transport protein
D CLJU_c35850 predicted Mn2+/Fe2+ transporter, NRAMP family K03322 mntH; manganese transport protein
D CLJU_c15660 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CLJU_c15670 predicted heavy metal resistance membrane protein K03325 ACR3; arsenite transporter
D CLJU_c22050 predicted stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D CLJU_c17360 predicted stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D CLJU_c41690 predicted stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D CLJU_c34040 virulence factor MviN related protein K03980 murJ; putative peptidoglycan lipid II flippase
D CLJU_c34120 predicted virulence factor MviN related protein K03980 murJ; putative peptidoglycan lipid II flippase
D CLJU_c11800 predicted permease K24180 mleP; malate permease and related proteins
D CLJU_c20380 predicted permease K24180 mleP; malate permease and related proteins
D CLJU_c26480 predicted permease K24180 mleP; malate permease and related proteins
D CLJU_c19370 putative permease K24180 mleP; malate permease and related proteins
D CLJU_c39920 putative lysine efflux transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D CLJU_c13690 predicted branched amino acid transport protein K26605 azlC; branched chain amino acid efflux pump
D CLJU_c13700 conserved hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D CLJU_c02690 putative membrane protein K23675 fmnP; riboflavin transporter
D CLJU_c10600 ftsW1; predicted cell division protein K03588 ftsW; cell division protein FtsW
D CLJU_c22260 predicted transporter protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CLJU_c05950 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CLJU_c05160 predicted exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D CLJU_c05140 putative capsular polysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator
D CLJU_c21650 feoA; putative ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D CLJU_c13960 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D CLJU_c13970 FeoA-like protein K04758 feoA; ferrous iron transport protein A
D CLJU_c21660 feoB2; predicted ferrous iron transport protein K04759 feoB; ferrous iron transport protein B
D CLJU_c13980 feoB1; ferrous iron transport protein K04759 feoB; ferrous iron transport protein B
D CLJU_c25420 putative tryptophan-rich sensory protein K05770 TSPO; translocator protein
D CLJU_c05620 putative membrane protein, involved in Mg2+ transport K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:clj02044]
D CLJU_c05610 predicted bifunctional type IV leader peptidase/N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CLJU_c28890 putative type IV leader peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CLJU_c10920 conserved hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D CLJU_c10900 exeE; predicted general secretion pathway protein E K02652 pilB; type IV pilus assembly protein PilB
D CLJU_c10910 exeF; predicted general secretion pathway protein F K02653 pilC; type IV pilus assembly protein PilC
D CLJU_c12270 pilT; predicted twitching motility protein K02669 pilT; twitching motility protein PilT
D CLJU_c28830 putative cell wall binding protein K02279 cpaB; pilus assembly protein CpaB
D CLJU_c28820 putative response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D CLJU_c28810 putative type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CLJU_c28800 putative type II secretion system protein K12510 tadB; tight adherence protein B
D CLJU_c28790 putative type II secretion system protein K12511 tadC; tight adherence protein C
D CLJU_c28860 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D CLJU_c10670 putative membrane protein K02221 yggT; YggT family protein
D CLJU_c07450 predicted DNA-binding competence protein K02237 comEA; competence protein ComEA
D CLJU_c02330 cytidine deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CLJU_c33850 predicted hydrolase K02238 comEC; competence protein ComEC
D CLJU_c07880 predicted membrane protein K02238 comEC; competence protein ComEC
D CLJU_c06590 predicted hydrolase, ComE-like protein K02238 comEC; competence protein ComEC
D CLJU_c02610 putative amidophosphoribosyltransferase ComFC K02242 comFC; competence protein ComFC
D CLJU_c10370 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CLJU_c02710 hypothetical protein K04061 flhB2; flagellar biosynthesis protein
D CLJU_c10220 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CLJU_c10240 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D CLJU_c10250 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CLJU_c09480 fliN; predicted flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CLJU_c10330 fliO; putative flagellar biogenesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D CLJU_c10340 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CLJU_c10350 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CLJU_c10360 fusion of flagellar biosynthesis proteins FliR and FlhB K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB
D CLJU_c02630 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLJU_c33750 secD; predicted protein-export membrane protein K03072 secD; preprotein translocase subunit SecD
D CLJU_c41180 secE; predicted preprotein translocase SecE K03073 secE; preprotein translocase subunit SecE
D CLJU_c33740 secF; predicted protein-export membrane protein K03074 secF; preprotein translocase subunit SecF
D CLJU_c39100 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D CLJU_c40840 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CLJU_c12880 predicted signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLJU_c12860 ftsY; predicted cell division protein K03110 ftsY; fused signal recognition particle receptor
D CLJU_c33790 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D CLJU_c26750 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLJU_c42940 oxaA; predicted membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:clj02042]
D CLJU_c28430 conserved protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CLJU_c33640 hemolysin III related protein K11068 hlyIII; hemolysin III
D CLJU_c22020 zinc dependent phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:clj02022]
D CLJU_c12380 phoR; predicted phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLJU_c19450 predicted two-component response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLJU_c12370 phoB; predicted transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLJU_c06950 predicted transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLJU_c29210 predicted transcriptional regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D CLJU_c39520 kdpD; predicted osmosensitive K+ channel histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CLJU_c39510 predicted two-component response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CLJU_c29600 predicted two-component response regulator K07775 resD; two-component system, OmpR family, response regulator ResD
D CLJU_c41760 predicted sensory transduction protein K07775 resD; two-component system, OmpR family, response regulator ResD
D CLJU_c30140 predicted two-component response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D CLJU_c14400 predicted two component sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CLJU_c19940 conserved hypothetical protein K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CLJU_c14180 predicted two component sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CLJU_c14390 two-component response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D CLJU_c14170 two-component response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D CLJU_c30640 predicted sensory transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CLJU_c15470 predicted sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CLJU_c15460 predicted two-component response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D CLJU_c25090 predicted sensory transduction histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLJU_c14370 vanS; sensor protein VanS K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLJU_c32970 predicted two-component response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLJU_c21980 predicted response regulator receiver domain protein K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLJU_c14380 vanR; regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLJU_c38680 predicted two-component response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLJU_c15810 predicted two component sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D CLJU_c17320 predicted two component sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D CLJU_c15800 predicted two-component response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D CLJU_c17310 predicted transcriptional regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D CLJU_c22960 predicted two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJU_c25670 predicted two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJU_c09180 predicted two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJU_c07840 predicted two-component sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJU_c09170 predicted two-component response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLJU_c22950 predicted two-component response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLJU_c25720 predicted two-component response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLJU_c00820 predicted transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D CLJU_c28880 two-component sensor histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D CLJU_c11220 spo0A; spo0A-like protein K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CLJU_c38480 predicted sensor histidine kinase K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D CLJU_c38470 predicted response regulator K11615 malR; two-component system, CitB family, response regulator MalR
D CLJU_c35180 predicted two-component sensor histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLJU_c35170 predicted response regulator receiver domain protein K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CLJU_c37320 predicted response regulator, LytR/AlgR family K02477 K02477; two-component system, LytTR family, response regulator
D CLJU_c26460 predicted transcriptional regulator K02477 K02477; two-component system, LytTR family, response regulator
D CLJU_c09430 cheA1; chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLJU_c22120 cheA2; predicted chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLJU_c09450 cheY1; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLJU_c22130 cheY2; predicted chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLJU_c30040 predicted signal receiver domain protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLJU_c09410 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CLJU_c20780 sensor histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D CLJU_c28070 putative membrane-bound ATPase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D CLJU_c20770 predicted two-component response regulator K07719 glnL; two-component system, response regulator GlnL
D CLJU_c28040 transcriptional regulatory protein K07719 glnL; two-component system, response regulator GlnL
D CLJU_c28060 transcriptional regulatory protein K07719 glnL; two-component system, response regulator GlnL
D CLJU_c17730 hypothetical protein with a response regulator receiver domain K07719 glnL; two-component system, response regulator GlnL
D CLJU_c11850 predicted response regulator (CheY-like and HTH domains) K07720 yesN; two-component system, response regulator YesN
D CLJU_c25870 putative protein with a AraC-like DNA binding domain K07720 yesN; two-component system, response regulator YesN
D CLJU_c39690 predicted response regulator K07720 yesN; two-component system, response regulator YesN
D CLJU_c30050 putative sensor histidine kinase/response regulator hybrid K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:clj02035]
D CLJU_c09430 cheA1; chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLJU_c22120 cheA2; predicted chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLJU_c09390 cheW1; chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D CLJU_c09460 cheW2; chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D CLJU_c22110 cheW3; predicted chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLJU_c18860 putative CheC-like chemotaxis protein K03409 cheX; chemotaxis protein CheX
D CLJU_c09440 cheC; chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D CLJU_c09400 cheD; chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D CLJU_c09420 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CLJU_c09410 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CLJU_c09450 cheY1; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLJU_c22130 cheY2; predicted chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLJU_c30040 predicted signal receiver domain protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLJU_c18040 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c08960 predicted methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c04770 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c06030 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c03920 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c03950 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c09030 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c09310 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c10160 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c02870 predicted chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c18670 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c18880 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c19970 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c28030 predicted methyl-accepting chemotaxis protein, Cache-1 domain containing protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c14810 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c15520 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c24340 predicted methyl-accepting transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c24770 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c22880 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c22910 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c33150 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c33490 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c22100 predicted methyl-accepting chemotaxis transducer protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c30400 predicted chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c30430 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c30560 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c21430 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c14110 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c13460 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c13760 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c13830 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c13860 putative methyl-accepting transducer K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c38740 predicted membrane-bound methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c36200 predicted methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c42480 predicted membrane associated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJU_c10240 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D CLJU_c10250 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CLJU_c10260 fliJ; flagellar biosynthesis chaperone FliJ K02413 fliJ; flagellar protein FliJ
D CLJU_c10330 fliO; putative flagellar biogenesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D CLJU_c10340 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CLJU_c10350 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CLJU_c10360 fusion of flagellar biosynthesis proteins FliR and FlhB K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB
D CLJU_c10370 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CLJU_c10230 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CLJU_c09470 fliM; flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D CLJU_c09480 fliN; predicted flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CLJU_c10220 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CLJU_c10320 fliL; flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D CLJU_c10210 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CLJU_c10270 fliK; predicted flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D CLJU_c10190 flgB; flagellar basal body protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CLJU_c10200 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CLJU_c10280 flgD; predicted flagellar hook protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D CLJU_c10440 flgG1; flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D CLJU_c10450 flgG2; flagellar basal-body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D CLJU_c10300 flgE; predicted flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D CLJU_c09510 flgK; Flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D CLJU_c09520 flgL; putative flagellar hook-associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D CLJU_c09670 conserved hypothetical protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D CLJU_c09710 flaB1; putative flagellin B K02406 fliC; flagellin
D CLJU_c09630 flagellin protein K02406 fliC; flagellin
D CLJU_c10180 flaB2; flagellin subunit protein B K02406 fliC; flagellin
D CLJU_c09580 fliD1; flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2
D CLJU_c09610 fliD2; flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2
D CLJU_c09570 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CLJU_c10410 RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
D CLJU_c01450 motA1; chemotaxis protein K02556 motA; chemotaxis protein MotA
D CLJU_c19720 motA2; predicted flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D CLJU_c01460 motB1; predicted flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CLJU_c19710 motB2; predicted flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CLJU_c09530 flagella-related conserved hypothetical protein K13626 fliW; flagellar assembly factor FliW
D CLJU_c09490 flgM; negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
D CLJU_c09550 flaG; predicted flagellar protein K06603 flaG; flagellar protein FlaG
D CLJU_c10310 putative flagellar protein FlbD K02385 flbD; flagellar protein FlbD
D CLJU_c10380 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D CLJU_c10390 fleN; putative flagellar synthesis regulator FleN K04562 flhG; flagellar biosynthesis protein FlhG
D CLJU_c12270 pilT; predicted twitching motility protein K02669 pilT; twitching motility protein PilT
D CLJU_c10920 conserved hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D CLJU_c10900 exeE; predicted general secretion pathway protein E K02652 pilB; type IV pilus assembly protein PilB
D CLJU_c10910 exeF; predicted general secretion pathway protein F K02653 pilC; type IV pilus assembly protein PilC
D CLJU_c05610 predicted bifunctional type IV leader peptidase/N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CLJU_c28890 putative type IV leader peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CLJU_c28860 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D CLJU_c28830 putative cell wall binding protein K02279 cpaB; pilus assembly protein CpaB
D CLJU_c28820 putative response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D CLJU_c28810 putative type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:clj04812]
D CLJU_c13660 conserved hypothetical protein with a extradiol ring-cleavage dioxygenase, subunit B domain K06990 MEMO1; MEMO1 family protein
D CLJU_c02500 MreB/Mbl protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CLJU_c07220 mreB; predicted rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CLJU_c12300 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CLJU_c12290 ftsA1; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CLJU_c07260 minC; predicted septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CLJU_c07270 minD; predicted septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D CLJU_c07280 minE; predicted septum formation topological specificity factor K03608 minE; cell division topological specificity factor
D CLJU_c42880 parA; predicted chromosome partitioning protein K03496 parA; chromosome partitioning protein
D CLJU_c42870 putative spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLJU_c42890 parB; predicted chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:clj04147]
D CLJU_c19770 heat shock protein htpG, chaperone, HSP90 family K04079 HSP90A; molecular chaperone HtpG
D CLJU_c39110 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLJU_c39150 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLJU_c39140 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CLJU_c03260 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLJU_c12090 predicted dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CLJU_c37190 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLJU_c07980 dnaK; predicted molecular chaperone DnaK, HSP70 family K04043 dnaK; molecular chaperone DnaK
D CLJU_c37130 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLJU_c37180 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CLJU_c41060 tuf1; elongation factor Tu K02358 tuf; elongation factor Tu
D CLJU_c41200 tuf2; elongation factor Tu K02358 tuf; elongation factor Tu
D CLJU_c08030 predicted HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CLJU_c23630 predicted acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLJU_c40830 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CLJU_c33720 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CLJU_c06710 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CLJU_c06700 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CLJU_c23790 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLJU_c35890 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLJU_c41950 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLJU_c31960 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CLJU_c00970 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJU_c11580 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJU_c34760 predicted phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJU_c32780 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJU_c30610 predicted D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJU_c08590 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CLJU_c22210 bifunctional AICARFT/IMPCHase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CLJU_c37600 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJU_c13890 etfA1; electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D CLJU_c20340 etfA2; predicted electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D CLJU_c40220 fixB; predicted electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D CLJU_c39130 tim; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:clj02048]
D CLJU_c03330 type I restriction enzyme, endonuclease subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CLJU_c03320 type I restriction enzyme, specificity subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CLJU_c03310 restriction-modification system K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CLJU_c30980 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CLJU_c33980 predicted DNA modification methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CLJU_c03470 putative phage-related protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D CLJU_c15150 conserved hypothetical protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D CLJU_c03040 transcriptional regulator K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D CLJU_c03030 putative CopG-family transcriptional regulator K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D CLJU_c32640 predicted death on curing protein K07341 doc; death on curing protein
D CLJU_c32650 putative prevent-host-death protein K19165 phd; antitoxin Phd
D CLJU_c12300 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CLJU_c02500 MreB/Mbl protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CLJU_c07220 mreB; predicted rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CLJU_c09200 gyrA2; DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CLJU_c09190 gyrB2; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CLJU_c13390 gluS; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CLJU_c14540 nifS1; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJU_c23390 nifS2; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJU_c28360 nifS3; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJU_c12110 homocysteine desulfhydrase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJU_c14580 conserved hypothetical protein K19169 dndB; DNA sulfur modification protein DndB
D CLJU_c14570 conserved hypothetical protein K19170 dndC; DNA sulfur modification protein DndC
D CLJU_c14560 conserved hypothetical protein K19171 dndD; DNA sulfur modification protein DndD
D CLJU_c14550 hypothetical protein K19172 dndE; DNA sulfur modification protein DndE
D CLJU_c14490 hypothetical protein K19173 dptF; DNA phosphorothioation-dependent restriction protein DptF
D CLJU_c14500 conserved hypothetical protein K19174 dptG; DNA phosphorothioation-dependent restriction protein DptG
D CLJU_c14510 conserved hypothetical protein K19175 dptH; DNA phosphorothioation-dependent restriction protein DptH
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:clj04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:clj04090]
C 01504 Antimicrobial resistance genes [BR:clj01504]
D CLJU_c14140 putative permease K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D CLJU_c37160 predicted permease K18214 tetP_A; MFS transporter, DHA3 family, tetracycline resistance protein
D CLJU_c24640 putative elongation factor with tetracycline resistance domain K18220 tetM; ribosomal protection tetracycline resistance protein
D CLJU_c19020 predicted ABC transporter with duplicated ATPase domain K18231 msr; macrolide transport system ATP-binding/permease protein
D CLJU_c25680 putative erythromycin esterase K06880 ereA_B; erythromycin esterase [EC:3.1.1.-]
D CLJU_c25940 cat; chloramphenicol O-acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D CLJU_c06790 putative antirepressor regulating drug resistance (MecR1), membrane-bound K02172 blaR1; bla regulator protein blaR1
D CLJU_c38710 putative membrane-associated protein with a peptidase domain K02172 blaR1; bla regulator protein blaR1
D CLJU_c25170 conserved hypothetical protein K02172 blaR1; bla regulator protein blaR1
D CLJU_c13480 putative regulatory protein, associated with drug resistance K02172 blaR1; bla regulator protein blaR1
D CLJU_c18930 predicted regulatory protein K02172 blaR1; bla regulator protein blaR1
D CLJU_c13470 predicted transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLJU_c06780 predicted penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLJU_c38720 predicted penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLJU_c25160 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLJU_c13550 hypothetical protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLJU_c18920 predicted transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CLJU_c16430 putative beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CLJU_c25090 predicted sensory transduction histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLJU_c15720 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJU_c14370 vanS; sensor protein VanS K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLJU_c32970 predicted two-component response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLJU_c21980 predicted response regulator receiver domain protein K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLJU_c14380 vanR; regulatory protein VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLJU_c38680 predicted two-component response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLJU_c22260 predicted transporter protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CLJU_c05950 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D CLJU_c04090 predicted transporter protein K18303 mexK; multidrug efflux pump
D CLJU_c07600 predicted transporter protein K18303 mexK; multidrug efflux pump
D CLJU_c27120 transcriptional regulator K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D CLJU_c27110 predicted Na+-driven efflux pump K18908 mepA; MATE family, multidrug efflux pump
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:clj00537]
D CLJU_c12090 predicted dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:clj03100]
D CLJU_c06240 trnA1; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLJU_c41400 trnA3; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLJU_c06530 trnA2; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLJU_c36730 trnR4; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJU_c36810 trnR5; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJU_c00200 trnR1; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJU_c36690 trnR3; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJU_c00750 trnR2; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJU_c06570 trnN1; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLJU_c41390 trnN2; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLJU_c41470 trnN3; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLJU_c42250 trnD1; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLJU_c42280 trnD2; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLJU_c01330 trnC1; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CLJU_c34520 trnC2; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CLJU_c02760 trnQ1; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLJU_c28460 trnQ2; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLJU_c36780 trnQ3; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLJU_c42270 trnE2; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLJU_c42300 trnE3; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLJU_c31750 trnE1; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLJU_c34510 trnG1; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJU_c36750 trnG4; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJU_c36700 trnG2; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJU_c36820 trnG5; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJU_c36740 trnG3; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJU_c41220 trnG6; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJU_c36790 trnH; tRNA-His K14226 tRNA-His; tRNA His
D CLJU_c06250 trnI1; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CLJU_c06540 trnI2; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CLJU_c41580 trnL6; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJU_c41610 trnL7; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJU_c28440 trnL1; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJU_c36760 trnL4; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJU_c32740 trnL2; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJU_c33580 trnL3; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJU_c39240 trnL5; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJU_c36800 trnK5; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJU_c36720 trnK3; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJU_c01030 trnK1; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJU_c36770 trnK4; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJU_c28450 trnK2; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJU_c00110 trnM1; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJU_c41410 trnM3; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJU_c41590 trnM5; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJU_c14920 trnM2; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJU_c41570 trnM4; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJU_c41600 trnM6; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJU_c01170 trnF1; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLJU_c06320 trnF2; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLJU_c34500 trnF3; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLJU_c36710 trnP1; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLJU_c36830 trnP2; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLJU_c41830 trnP3; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLJU_c00190 trnS2; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLJU_c00180 trnS1; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLJU_c00770 trnS3; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLJU_c00840 trnS4; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLJU_c02530 trnT1; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLJU_c02560 trnT2; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLJU_c42240 trnT4; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLJU_c42680 trnT5; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLJU_c41210 trnT3; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLJU_c38150 trnW; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CLJU_c02540 trnY1; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLJU_c02570 trnY2; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLJU_c02550 trnV1; tRNA-Val K14237 tRNA-Val; tRNA Val
D CLJU_c42290 trnV4; tRNA-Val K14237 tRNA-Val; tRNA Val
D CLJU_c34490 trnV2; tRNA-Val K14237 tRNA-Val; tRNA Val
D CLJU_c42260 trnV3; tRNA-Val K14237 tRNA-Val; tRNA Val
D CLJU_c27280 trnU1; tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CLJU_c27690 trnU2; tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CLJU_c00080 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c01290 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c14930 rrsG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c06230 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c01000 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c06520 rrsF; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c41440 rrsI; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c01140 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c28260 rrsH; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJU_c06260 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c06550 rrlF; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c01010 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c00090 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c28250 rrlH; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c01300 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c14940 rrlG; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c01150 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c41430 rrlI; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJU_c00100 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c28240 rrfH; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c01160 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c41420 rrfI; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c01020 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c06560 rrfF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c01310 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c14950 rrfG; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJU_c06310 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CLJU_c03850 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D CLJU_c38400 predicted pyridoxal phosphate biosynthetic protein K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D CLJU_c23460 bdh; predicted NAD-dependent butanol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D CLJU_c23890 xdhA; xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D CLJU_c23600 coxS; aerobic-type carbon monoxide dehydrogenase small subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D CLJU_c29930 putative oxidoreductase, iron-sulfur binding subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D CLJU_c24130 predicted aldehyde oxidoreductase K07469 mop; aldehyde oxidoreductase [EC:1.2.99.7]
D CLJU_c24050 predicted aldehyde oxidoreductase K07469 mop; aldehyde oxidoreductase [EC:1.2.99.7]
D CLJU_c40210 fixC; predicted FAD dependent dehydrogenase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D CLJU_c21940 putative flavoprotein K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4]
D CLJU_c25150 acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D CLJU_c18620 manganese catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D CLJU_c07040 NADH dehydrogenase I, F subunit K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3]
D CLJU_c19490 ftn; ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D CLJU_c27310 Glycine/sarcosine/betaine reductase complex component A2 K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CLJU_c27790 Glycine/sarcosine/betaine reductase complex component A2 K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CLJU_c27290 glycine reductase complex component C subunit alpha K21576 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CLJU_c27770 glycine reductase complex component C subunit alpha K21576 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CLJU_c27300 glycine reductase complex component C subunit beta K21577 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CLJU_c27780 glycine reductase complex component C subunit beta K21577 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CLJU_c27360 predicted glycine/sarcosine/betaine reductase component B subunit alpha K21578 grdI; betaine reductase complex component B subunit alpha [EC:1.21.4.4]
D CLJU_c27840 glycine reductase complex component B, subunit alpha K21578 grdI; betaine reductase complex component B subunit alpha [EC:1.21.4.4]
D CLJU_c27350 glycine reductase complex component B gamma subunit K21579 grdH; betaine reductase complex component B subunit beta [EC:1.21.4.4]
D CLJU_c27830 betaine reductase complex component B, subunit gamma, selenocysteine-containing protein K21579 grdH; betaine reductase complex component B subunit beta [EC:1.21.4.4]
D CLJU_c24080 radical SAM domain protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5]
D CLJU_c01850 nrdG; predicted anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D CLJU_c25970 pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLJU_c13670 predicted pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLJU_c11840 pflA1; pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLJU_c41920 pyruvate-formate lyase-activating enzyme K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLJU_c39820 pflA2; pyruvate formate-lyase activating enzyme K20037 cutD; choline trimethylamine-lyase activating enzyme [EC:1.97.1.-]
D CLJU_c28420 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CLJU_c15750 conserved hypothetical protein K05303 K05303; O-methyltransferase [EC:2.1.1.-]
D CLJU_c04060 predicted methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D CLJU_c23320 conserved hypothetical protein K22882 K22882; thymidylate synthase [EC:2.1.1.-]
D CLJU_c42560 ornithine carbamoyltransferase K13252 ptcA; putrescine carbamoyltransferase [EC:2.1.3.6]
D CLJU_c26840 conserved hypothetical protein K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D CLJU_c24570 predicted acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D CLJU_c32330 predicted acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D CLJU_c05880 putative glycosylase K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D CLJU_c38070 nicotinate-nucleotide diphosphorylase K03813 modD; molybdenum transport protein [EC:2.4.2.-]
D CLJU_c02850 PurE related protein K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D CLJU_c15580 hypothetical protein K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D CLJU_c08410 predicted prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CLJU_c35510 predicted thiamine biosynthesis protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D CLJU_c42400 apbE; putative membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D CLJU_c38410 putative membrane protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D CLJU_c03820 conserved hypothetical protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D CLJU_c12690 predicted kinase K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D CLJU_c42310 putative ATP/GTP binding protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D CLJU_c03390 phage related DNA polymerase K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]
D CLJU_c36550 phage related DNA polymerase K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]
D CLJU_c30970 membrane associated GGDEF domain containing protein K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D CLJU_c27380 membrane associated GGDEF domain containing protein K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D CLJU_c26820 membrane associated GGDEF domain containing protein K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D CLJU_c41310 putative DNA-binding protein K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D CLJU_c40470 conserved hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D CLJU_c38600 ppsA; phosphoenolpyruvate synthase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D CLJU_c14340 phosphoenolpyruvate synthase related protein K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D CLJU_c33960 predicted anti-sigma factor F K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D CLJU_c21910 hprK; predicted HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D CLJU_c41340 putative ATP:guanido phosphotransferase related protein K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D CLJU_c05940 putative polyprotein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D CLJU_c39350 predicted thioesterase K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D CLJU_c36140 predicted thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CLJU_c41560 predicted stage II sporulation protein E K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D CLJU_c05150 capC; predicted capsular polysaccharide biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D CLJU_c21870 predicted metal-dependent phosphoesterase, PHP family K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D CLJU_c42740 putative signaling protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D CLJU_c08070 predicted membrane-associated phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D CLJU_c01740 predicted deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CLJU_c08780 tatD; predicted Mg-dependent DNase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CLJU_c01760 conserved hypothetical protein K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D CLJU_c29360 polygalacturonase K18650 pehX; exo-poly-alpha-galacturonosidase [EC:3.2.1.82]
D CLJU_c13520 conserved hypothetical protein K18205 hypBA1; non-reducing end beta-L-arabinofuranosidase [EC:3.2.1.185]
D CLJU_c28080 predicted glycosyl hydrolase containing cell wall binding domains K06306 sleL; cortical fragment-lytic enzyme [EC:3.2.1.-]
D CLJU_c13410 dacA2; D-alanyl-D-alanine carboxypeptidase precursor K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D CLJU_c32580 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c03740 predicted phage related amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJU_c29960 N-acyl-D-amino-acid deacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D CLJU_c23870 N-acyl-D-amino-acid deacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D CLJU_c17840 def4; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CLJU_c21960 def5; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CLJU_c13640 def2; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CLJU_c12560 def1; N-formylmethionyl-tRNA deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CLJU_c16270 def3; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CLJU_c26730 predicted polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CLJU_c28370 predicted polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CLJU_c06180 predicted polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CLJU_c38420 predicted polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CLJU_c33990 predicted polysaccharide deacetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D CLJU_c30530 predicted amidohydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D CLJU_c40400 hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CLJU_c07420 conserved hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CLJU_c02300 protein-tyrosine-phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D CLJU_c34310 putative esterase K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D CLJU_c14460 putative UV endonuclease K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-]
D CLJU_c33020 predicted spore photoproduct lyase K03716 splB; spore photoproduct lyase [EC:4.1.99.14]
D CLJU_c03010 putative sugar kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CLJU_c23860 diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D CLJU_c39830 pflB3; pyruvate formate-lyase K20038 cutC; choline trimethylamine-lyase [EC:4.3.99.4]
D CLJU_c26710 conserved hypothetical protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D CLJU_c01960 conserved hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D CLJU_c42570 putative L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D CLJU_c35740 predicted (R)-2-hydroxyglutaryl-CoA dehydratase activator K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D CLJU_c02100 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D CLJU_c11370 rnfD; electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D CLJU_c11360 rnfC; predicted electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D CLJU_c11410 rnfB; predicted electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D CLJU_c06890 predicted cation-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLJU_c10480 mgtA; predicted cation-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLJU_c07870 predicted cation-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLJU_c29070 predicted cation-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D CLJU_c00900 sfsA; putative sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D CLJU_c28910 predicted rubrerythrin K19824 fprB; rubrerythrin
D CLJU_c07020 predicted formate dehydrogenase, subunit FdhD K02379 fdhD; FdhD protein
D CLJU_c23670 fdrA; predicted FdrA K02381 fdrA; FdrA protein
D CLJU_c01820 ferredoxin K05337 fer; ferredoxin
D CLJU_c11380 rnfG; predicted electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D CLJU_c11390 rnfE; electron transport complex protein RnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D CLJU_c11400 rnfA; electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D CLJU_c12120 nifU; NifU protein, N-terminal K04488 iscU; nitrogen fixation protein NifU and related proteins
D CLJU_c23540 nifB; FeMo cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB
D CLJU_c04950 nifE; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D CLJU_c23110 nitrogenase iron-molybdenum cofactor biosynthesis protein K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D CLJU_c17470 putative membrane-associated ferredoxin K02574 napH; ferredoxin-type protein NapH
D CLJU_c26430 putative membrane protein with a ferredoxin domain K02574 napH; ferredoxin-type protein NapH
D CLJU_c13880 etfB1; electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
D CLJU_c20330 etfB2; predicted electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
D CLJU_c40230 fixA; predicted electron transfer flavoprotein beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
D CLJU_c40200 FixX-related protein K03855 fixX; ferredoxin like protein
C 99983 Lipid metabolism
D CLJU_c39180 putative degV protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D CLJU_c24960 conserved hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CLJU_c11910 eutJ1; putative ethanolamine utilization protein K04024 eutJ; ethanolamine utilization protein EutJ
D CLJU_c39800 eutJ2; predicted ethanolamine utilization protein K04024 eutJ; ethanolamine utilization protein EutJ
D CLJU_c17920 propanediol utilization protein pduV related protein K04029 eutP; ethanolamine utilization protein EutP
D CLJU_c11940 eutQ1; predicted ethanolamine utilization protein EutQ K04030 eutQ; ethanolamine utilization protein EutQ
D CLJU_c39750 eutQ2; predicted ethanolamine utilization protein EutQ K04030 eutQ; ethanolamine utilization protein EutQ
D CLJU_c17930 putative microcompartment protein K04031 eutS; ethanolamine utilization protein EutS
D CLJU_c10650 conserved hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CLJU_c19680 putative membrane protein K07027 K07027; glycosyltransferase 2 family protein
D CLJU_c04820 predicted cell wall hydrolyse K01449 cwlJ; cell wall hydrolase
D CLJU_c40480 putative cell wall hydrolase K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D CLJU_c00730 aarF; putative ubiquinone biosynthesis protein AarF K03688 ubiB; ubiquinone biosynthesis protein
D CLJU_c07010 putative molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D CLJU_c39770 putative RnfC related NADH dehydrogenase K27271 pduS; cobalamin reductase
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CLJU_c33240 cspA; predicted cold shock protein CspA K03704 cspA; cold shock protein
D CLJU_c19580 cspC2; cold-shock protein K03704 cspA; cold shock protein
D CLJU_c19500 cspC1; cold-shock protein K03704 cspA; cold shock protein
D CLJU_c03400 putative prophage antirepressor K07741 antB; anti-repressor protein
D CLJU_c04910 nitrogen fixation regulatory protein I K02589 nifHD1; nitrogen regulatory protein PII 1
D CLJU_c04920 nitrogen regulatory protein P-II K02590 nifHD2; nitrogen regulatory protein PII 2
D CLJU_c02680 tex; transcriptional accessory protein K06959 tex; protein Tex
D CLJU_c12510 conserved hypothetical protein K09777 remA; extracellular matrix regulatory protein A
D CLJU_c00050 conserved hypothetical protein K24648 remB; extracellular matrix regulatory protein B
C 99974 Translation
D CLJU_c41620 predicted RNA binding S1 domain protein K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D CLJU_c24740 clpS; ATP-dependent protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CLJU_c41350 putative UvrB/UvrC domain protein K19411 mcsA; protein arginine kinase activator
D CLJU_c35650 tig; trigger factor K03545 tig; trigger factor
D CLJU_c39080 smpB; predicted SsrA-binding protein K03664 smpB; SsrA-binding protein
D CLJU_c23080 hypC; predicted hydrogenase expression/formation protein K04653 hypC; hydrogenase expression/formation protein HypC
D CLJU_c23070 hypD; predicted hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D CLJU_c23060 hypE1; predicted hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D CLJU_c36870 hypE2; predicted hydrogenase maturation factor K04655 hypE; hydrogenase expression/formation protein HypE
D CLJU_c23090 hypF; predicted hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D CLJU_c12980 putative ATPase with chaperone activity K07391 comM; magnesium chelatase family protein
D CLJU_c06770 predicted xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family K07402 xdhC; xanthine dehydrogenase accessory factor
D CLJU_c24000 putative molybdenum dehydrogenase accessory protein K07402 xdhC; xanthine dehydrogenase accessory factor
D CLJU_c24070 putative molybdenum dehydrogenase accessory protein K07402 xdhC; xanthine dehydrogenase accessory factor
D CLJU_c17940 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D CLJU_c06130 predicted ribonuclease H K06993 K06993; ribonuclease H-related protein
D CLJU_c07210 DNA repair protein, RadC family K03630 radC; DNA repair protein RadC
D CLJU_c30180 conserved hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D CLJU_c12970 conserved hypothetical protein K07460 yraN; putative endonuclease
D CLJU_c01940 conserved hypothetical protein K07461 K07461; putative endonuclease
D CLJU_c12990 predicted Smf protein K04096 smf; DNA processing protein
D CLJU_c00350 putative phage-related terminase K07474 xtmA; phage terminase small subunit
D CLJU_c31400 putative phage terminase, small subunit K07474 xtmA; phage terminase small subunit
D CLJU_c31380 putative phage terminase, large subunit K06909 xtmB; phage terminase large subunit
D CLJU_c12000 predicted helicase subunit of Holliday junction resolvase K07478 ycaJ; putative ATPase
D CLJU_c03420 phage-related protein K06919 K06919; putative DNA primase/helicase
D CLJU_c36530 phage related protein K06919 K06919; putative DNA primase/helicase
D CLJU_c19190 conserved hypothetical protein K07483 K07483; transposase
D CLJU_c05390 putative transposase, IS66 like protein K07484 K07484; transposase
D CLJU_c09830 putative transposase K07484 K07484; transposase
D CLJU_c05380 predicted transposase K07484 K07484; transposase
D CLJU_c09760 hypothetical transposase K07484 K07484; transposase
D CLJU_c09820 putative transposase K07484 K07484; transposase
D CLJU_c00480 hypothetical protein K07496 K07496; putative transposase
D CLJU_c19200 putative transposase K07497 K07497; putative transposase
D CLJU_c32470 predicted phage-related integrase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D CLJU_c01540 predicted transcriptional regulator K03969 pspA; phage shock protein A
D CLJU_c00860 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CLJU_c25860 predicted sugar:sodium symporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D CLJU_c01250 putative cation symporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D CLJU_c25800 predicted sugar:sodium symporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D CLJU_c22710 putative Na+/sugar symporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D CLJU_c17900 predicted amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D CLJU_c16020 predicted aminoacid permease K03293 TC.AAT; amino acid transporter, AAT family
D CLJU_c40660 predicted amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D CLJU_c09260 predicted aminoacid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CLJU_c04750 putative amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CLJU_c04760 putative amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CLJU_c24320 putative aminoacid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CLJU_c23430 predicted amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CLJU_c23440 putative permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CLJU_c21450 predicted aminoacid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CLJU_c23280 predicted cation/multidrug efflux pump K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D CLJU_c12450 pitA; predicted phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D CLJU_c23180 predicted symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D CLJU_c13870 putative sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D CLJU_c32870 predicted sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D CLJU_c20530 predicted Na+/solute symporter: sodium/proline symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D CLJU_c17740 branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D CLJU_c19220 predicted nucleoside transporter family protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D CLJU_c15320 predicted nucleoside transporter family protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D CLJU_c15350 predicted nucleoside transporter family protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D CLJU_c35900 predicted uracil permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D CLJU_c28190 putative sodium:sulfate symporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D CLJU_c30440 putative membrane protein K07085 K07085; putative transport protein
C 99978 Cell growth
D CLJU_c37590 cooC1; putative CODH nickel-insertion accessory protein K07321 cooC; CO dehydrogenase maturation factor
D CLJU_c37660 cooC2; putative CODH nickel-insertion accessory protein K07321 cooC; CO dehydrogenase maturation factor
D CLJU_c37830 predicted CODH nickel-insertion accessory protein K07321 cooC; CO dehydrogenase maturation factor
D CLJU_c00890 conserved hypothetical protein K06317 bofA; inhibitor of the pro-sigma K processing machinery
D CLJU_c33410 cotJB; putative spore coat peptide assembly protein cotJB K06333 cotJB; spore coat protein JB
D CLJU_c33420 cotJC; predicted spore coat protein CotJC K06334 cotJC; spore coat protein JC
D CLJU_c42930 predicted RNA-binding protein K06346 jag; spoIIIJ-associated protein
D CLJU_c01700 predicted spore maturation protein A K06373 spmA; spore maturation protein A
D CLJU_c01710 predicted spore maturation protein B K06374 spmB; spore maturation protein B
D CLJU_c33970 spoIIAA; predicted anti-sigma factor F antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D CLJU_c11250 spoIIM; predicted stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M
D CLJU_c07920 predicted stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D CLJU_c02150 spoIIR; predicted stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D CLJU_c11030 spoIIIAA; predicted stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA
D CLJU_c11040 spoIIIAB; predicted stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB
D CLJU_c11050 spoIIIAC; predicted stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D CLJU_c11060 spoIIIAD; predicted stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD
D CLJU_c11070 spoIIIAE; predicted stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE
D CLJU_c11080 spoIIIAF; predicted stage III sporulation protein AF K06395 spoIIIAF; stage III sporulation protein AF
D CLJU_c11090 spoIIIAG; predicted stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG
D CLJU_c11100 spoIIIAH; predicted stage III sporulation protein AH K06397 spoIIIAH; stage III sporulation protein AH
D CLJU_c12490 stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D CLJU_c18520 putative recombinase K06400 spoIVCA; site-specific DNA recombinase
D CLJU_c35310 putative resolvase K06400 spoIVCA; site-specific DNA recombinase
D CLJU_c03760 DNA integration/recombination/invertion protein K06400 spoIVCA; site-specific DNA recombinase
D CLJU_c03770 putative recombinase K06400 spoIVCA; site-specific DNA recombinase
D CLJU_c20910 predicted stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D CLJU_c20940 predicted stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D CLJU_c41790 predicted stage V sporulation protein G K06412 spoVG; stage V sporulation protein G
D CLJU_c04330 predicted stage V sporulation protein R K06415 spoVR; stage V sporulation protein R
D CLJU_c13300 stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D CLJU_c05500 predicted polysaccharide biosynthesis protein with acetyltransferase domain K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF
D CLJU_c28580 predicted small acid-soluble spore protein K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D CLJU_c21860 predicted small acid-soluble spore protein K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D CLJU_c30960 predicted small acid-soluble spore protein K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D CLJU_c29810 predicted small acid-soluble spore protein K06425 sspH; small acid-soluble spore protein H (minor)
D CLJU_c02060 putative peptidase K06436 yabG; spore coat assemly protein
D CLJU_c19560 putative spore coat protein K06439 yraD; similar to spore coat protein
D CLJU_c19550 putative spore coat protein K06440 yraG; similar to spore coat protein
D CLJU_c19520 conserved hypothetical protein K06440 yraG; similar to spore coat protein
D CLJU_c18460 gerKA2; predicted spore germination protein K06295 gerKA; spore germination protein KA
D CLJU_c08490 predicted spore germination protein K06295 gerKA; spore germination protein KA
D CLJU_c16490 predicted spore germination protein K06295 gerKA; spore germination protein KA
D CLJU_c35950 gerXA; predicted spore germination protein K06295 gerKA; spore germination protein KA
D CLJU_c38850 gerA2; predicted spore germination protein GerA K06295 gerKA; spore germination protein KA
D CLJU_c38970 spore germination protein K06295 gerKA; spore germination protein KA
D CLJU_c39030 spore germination protein K06295 gerKA; spore germination protein KA
D CLJU_c08500 predicted spore germination protein K06297 gerKC; spore germination protein KC
D CLJU_c16480 grkC; predicted spore germination protein K06297 gerKC; spore germination protein KC
D CLJU_c38870 putative spore germination protein K06297 gerKC; spore germination protein KC
D CLJU_c38980 gerAC2; spore germination protein, GerAC K06297 gerKC; spore germination protein KC
D CLJU_c39040 predicted spore germination protein K06297 gerKC; spore germination protein KC
D CLJU_c02140 gerAB_AC; predicted spore germination protein GerAB/AC K06297 gerKC; spore germination protein KC
D CLJU_c35960 predicted spore germination protein K06297 gerKC; spore germination protein KC
D CLJU_c15610 gerAC1; predicted spore germination protein K06308 yfkR; spore germination protein
D CLJU_c02130 gerA1; predicted spore germination protein GerA K06310 yndD; spore germination protein
D CLJU_c02170 ypeB; predicted sporulation protein YpeB K06313 ypeB; spore germination protein
C 99993 Cell motility
D CLJU_c35100 conserved hypothetical protein, TfoX-like protein K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D CLJU_c37340 carbon starvation protein A K06200 cstA; carbon starvation protein
D CLJU_c37350 carbon starvation protein A K06200 cstA; carbon starvation protein
D CLJU_c12220 predicted membrane associated GTPase, Type A K06207 typA; GTP-binding protein
D CLJU_c29240 ACT domain protein K07166 K07166; ACT domain-containing protein
D CLJU_c29710 predicted phosphate starvation-inducable ATPase K07175 phoH2; PhoH-like ATPase
D CLJU_c04350 prkA; predicted serine kinase K07180 prkA; serine protein kinase
C 99992 Structural proteins
D CLJU_c30020 putative cell wall hydrolase K07273 acm; lysozyme
D CLJU_c15410 conserved hypothetical protein K01993 ABC-2.TX; HlyD family secretion protein
D CLJU_c23270 putative secretion protein K02005 ABC.CD.TX; HlyD family secretion protein
D CLJU_c18080 putative membrane-associated protein K02005 ABC.CD.TX; HlyD family secretion protein
D CLJU_c39760 predicted microcompartment shellprotein K27272 pduT; bacterial microcompartment shell protein
C 99994 Others
D CLJU_c12430 phoU; predicted phosphate transport system protein K02039 phoU; phosphate transport system protein
D CLJU_c21830 hemerythrin related protein K07216 hr; hemerythrin
D CLJU_c36090 hemerythrin related protein K07216 hr; hemerythrin
D CLJU_c04890 predicted molybdate-binding protein K07219 K07219; putative molybdopterin biosynthesis protein
D CLJU_c20180 predicted molybdenum cofactor biosynthesis protein with a molybdate-binding domain K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CLJU_c25580 putative membrane protein K26996 sdpI; immunity protein, SdpI family
D CLJU_c16940 conserved membrane protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CLJU_c27210 predicted acetyltransferase K02348 elaA; ElaA protein
D CLJU_c33510 putative phosphoesterase, PHP family K04477 ycdX; putative hydrolase
D CLJU_c03780 putative patatin-like phospholipase K07001 K07001; NTE family protein
D CLJU_c20840 putative esterase K07001 K07001; NTE family protein
D CLJU_c17030 putative hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D CLJU_c03160 conserved hypothetical protein K07038 K07038; inner membrane protein
D CLJU_c39320 predicted ribonuclease BN K07058 K07058; membrane protein
D CLJU_c26400 putative phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D CLJU_c19890 lemA like protein K03744 lemA; LemA protein
D CLJU_c15870 DedA family protein K03975 dedA; membrane-associated protein
D CLJU_c15950 conserved membrane protein K03975 dedA; membrane-associated protein
D CLJU_c33330 putative phage infection protein K01421 yhgE; putative membrane protein
D CLJU_c32070 putative phage infection protein K01421 yhgE; putative membrane protein
D CLJU_c32080 putative phage infection protein K01421 yhgE; putative membrane protein
D CLJU_c21770 putative membrane protein K08981 K08981; putative membrane protein
D CLJU_c35250 putative membrane protein K08982 K08982; putative membrane protein
D CLJU_c37860 putative membrane-spanning protein K08986 ycgQ; putative membrane protein
D CLJU_c37900 putative membrane protein K08986 ycgQ; putative membrane protein
C 99997 Function unknown
D CLJU_c33760 putative Fe-S oxidoreductase K06871 K06871; uncharacterized protein
D CLJU_c19900 putative glycin-rich transmembrane protein K06872 K06872; uncharacterized protein
D CLJU_c18640 conserved protein containing a thioredoxin domain K06888 K06888; uncharacterized protein
D CLJU_c18030 putative lipase with a cell wall binding domain K06889 K06889; uncharacterized protein
D CLJU_c26370 predicted acyl-CoA thioesterase 1 K06889 K06889; uncharacterized protein
D CLJU_c38820 hydrolase K06889 K06889; uncharacterized protein
D CLJU_c26700 conserved protein with an ATPase domain K06923 K06923; uncharacterized protein
D CLJU_c32430 conserved hypothetical protein K06926 K06926; uncharacterized protein
D CLJU_c42320 conserved hypothetical protein K06929 K06929; uncharacterized protein
D CLJU_c37700 predicted DNA-binding protein K06933 K06933; uncharacterized protein
D CLJU_c06360 putative metal dependent phosphohydrolase K06950 K06950; uncharacterized protein
D CLJU_c12900 conserved hypothetical protein K06960 K06960; uncharacterized protein
D CLJU_c41240 putative RNA-binding protein K06962 K06962; uncharacterized protein
D CLJU_c12580 putative zinc-dependent metalloprotease K06973 K06973; uncharacterized protein
D CLJU_c22550 conserved hypothetical protein K06987 K06987; uncharacterized protein
D CLJU_c01650 putative antibiotic resistance protein K07005 K07005; uncharacterized protein
D CLJU_c17520 putative antibiotic resistance protein K07005 K07005; uncharacterized protein
D CLJU_c31030 putative antibiotic resistance protein K07005 K07005; uncharacterized protein
D CLJU_c37060 putative antibiotic resistance protein K07005 K07005; uncharacterized protein
D CLJU_c38520 putative antibiotic resistance protein K07005 K07005; uncharacterized protein
D CLJU_c37770 hypothetical protein K07006 K07006; uncharacterized protein
D CLJU_c32150 putative metal-dependent RNase K07041 K07041; uncharacterized protein
D CLJU_c42530 putative amidohydrolase K07045 K07045; uncharacterized protein
D CLJU_c11510 putative hydrolase K07045 K07045; uncharacterized protein
D CLJU_c23620 putative nucleic-acid-binding protein containing a Zn-ribbon K07068 K07068; uncharacterized protein
D CLJU_c15360 predicted Zn-ribbon nucleic-acid-binding protein K07069 K07069; uncharacterized protein
D CLJU_c10780 putative oxidoreductase K07078 K07078; uncharacterized protein
D CLJU_c30540 predicted oxidoreductase, aldo/keto reductase family with a ferredoxin domain K07079 K07079; uncharacterized protein
D CLJU_c25200 predicted aldo/keto reductase K07079 K07079; uncharacterized protein
D CLJU_c29540 predicted permease K07089 K07089; uncharacterized protein
D CLJU_c27860 putative permease K07089 K07089; uncharacterized protein
D CLJU_c37870 putative permease K07089 K07089; uncharacterized protein
D CLJU_c37890 putative permease K07089 K07089; uncharacterized protein
D CLJU_c08280 putative membrane protein K07090 K07090; uncharacterized protein
D CLJU_c07860 putative membrane protein K07090 K07090; uncharacterized protein
D CLJU_c33310 putative permease K07090 K07090; uncharacterized protein
D CLJU_c29480 conserved hypothetical protein K07090 K07090; uncharacterized protein
D CLJU_c42450 putative permease K07090 K07090; uncharacterized protein
D CLJU_c36840 putative phosphoesterase K07095 K07095; uncharacterized protein
D CLJU_c24270 putative membrane-bound phosphohydrolase K07098 K07098; uncharacterized protein
D CLJU_c02720 predicted phosphohydrolase K07099 K07099; uncharacterized protein
D CLJU_c00130 predicted transcriptional regulator K07105 K07105; uncharacterized protein
D CLJU_c20960 predicted short-chain dehydrogenase K07124 K07124; uncharacterized protein
D CLJU_c18690 conserved protein with a radical SAM domain K07129 K07129; uncharacterized protein
D CLJU_c40450 predicted FAD dependent dehydrogenase K07137 K07137; uncharacterized protein
D CLJU_c42360 predicted dehydrogenase, FAD dependent K07137 K07137; uncharacterized protein
D CLJU_c26960 predicted Fe-S cluster protein K07138 K07138; uncharacterized protein
D CLJU_c17980 predicted Fe-S cluster protein K07138 K07138; uncharacterized protein
D CLJU_c41890 putative Fe-S oxidoreductase K07139 K07139; uncharacterized protein
D CLJU_c14870 putative membrane protein K07149 K07149; uncharacterized protein
D CLJU_c25520 putative membrane protein K07149 K07149; uncharacterized protein
D CLJU_c32170 putative membrane protein K07150 K07150; uncharacterized protein
D CLJU_c08260 conserved hypothetical protein K07164 K07164; uncharacterized protein
D CLJU_c42950 conserved hypothetical protein K08998 K08998; uncharacterized protein
D CLJU_c28780 conserved hypothetical protein K09005 K09005; uncharacterized protein
D CLJU_c08050 conserved hypothetical protein K09117 K09117; uncharacterized protein
D CLJU_c00140 conserved membrane protein K09118 K09118; uncharacterized protein
D CLJU_c17230 conserved protein K09138 K09138; uncharacterized protein
D CLJU_c17240 conserved protein K09138 K09138; uncharacterized protein
D CLJU_c29250 conserved hypothetical protein K09157 K09157; uncharacterized protein
D CLJU_c21780 conserved hypothetical protein K09167 K09167; uncharacterized protein
D CLJU_c27910 conserved hypothetical protein K09703 K09703; uncharacterized protein
D CLJU_c24480 conserved hypothetical protein K09706 K09706; uncharacterized protein
D CLJU_c09380 conserved hypothetical protein K09749 K09749; uncharacterized protein
D CLJU_c28620 conserved hypothetical protein K09764 K09764; uncharacterized protein
D CLJU_c02730 conserved hypothetical protein K09766 K09766; uncharacterized protein
D CLJU_c19950 conserved hypothetical protein K09766 K09766; uncharacterized protein
D CLJU_c37090 conserved hypothetical protein K09768 K09768; uncharacterized protein
D CLJU_c06870 conserved hypothetical protein K09770 K09770; uncharacterized protein
D CLJU_c13360 conserved hypothetical protein K09779 K09779; uncharacterized protein
D CLJU_c06720 predicted membrane protein K09779 K09779; uncharacterized protein
D CLJU_c04340 putative sporulation protein, YhbH-like protein K09786 K09786; uncharacterized protein
D CLJU_c12870 conserved hypothetical protein K09787 K09787; uncharacterized protein
D CLJU_c03710 putative membrane protein K09799 K09799; uncharacterized protein
D CLJU_c07810 putative membrane protein K09799 K09799; uncharacterized protein
D CLJU_c06900 predicted nucleic acid binding protein with S1 RNA binding domain K00243 K00243; uncharacterized protein
D CLJU_c20870 conserved hypothetical protein K09975 K09975; uncharacterized protein
D CLJU_c39210 conserved hypothetical protein K05967 K05967; uncharacterized protein
D CLJU_c21690 conserved hypothetical protein K07502 yprB; uncharacterized protein
D CLJU_c07370 conserved hypothetical protein K07584 ysxB; uncharacterized protein
D CLJU_c12440 conserved hypothetical protein K07220 K07220; uncharacterized protein
D CLJU_c13130 conserved hypothetical protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024