+D GENES KO
#
KEGG Orthology (KO) - Corynebacterium massiliense
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cmas00010]
D CMASS_07160 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CMASS_03210 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CMASS_04595 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CMASS_03810 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CMASS_09365 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CMASS_05615 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CMASS_03570 gap1; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CMASS_05625 gap2; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CMASS_05620 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CMASS_01225 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CMASS_03675 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CMASS_06850 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CMASS_07420 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CMASS_07245 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CMASS_01145 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CMASS_02445 galM; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CMASS_06080 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D CMASS_09635 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:cmas00020]
D CMASS_03145 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D CMASS_05470 acn; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CMASS_02250 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CMASS_04140 odhA; 2-oxoglutarate dehydrogenase E1/E2 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D CMASS_01145 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CMASS_08590 cat1; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CMASS_01160 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CMASS_01165 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CMASS_01155 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CMASS_03805 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CMASS_06545 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CMASS_02360 cfiB1; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CMASS_09635 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CMASS_07420 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CMASS_07245 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:cmas00030]
D CMASS_03210 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CMASS_05595 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CMASS_05605 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D CMASS_05225 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CMASS_05585 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CMASS_05590 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CMASS_08025 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CMASS_00865 deoC; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CMASS_02435 rbsK; Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D CMASS_03610 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CMASS_08285 gntK; Thermoresistant gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D CMASS_09365 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CMASS_03810 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CMASS_04595 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:cmas00040]
D CMASS_08260 uxaC; Uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D CMASS_08280 rspA; Starvation-sensing protein RspA K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D CMASS_08275 uidA; Beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D CMASS_09540 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CMASS_03325 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
C 00051 Fructose and mannose metabolism [PATH:cmas00051]
D CMASS_02650 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CMASS_00870 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CMASS_02620 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CMASS_02600 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CMASS_04595 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CMASS_03810 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CMASS_06255 lacC; Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D CMASS_09365 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CMASS_05615 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CMASS_10135 dhaK; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D CMASS_08025 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CMASS_02555 manP; PTS system mannose-specific EIIBCA component K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:cmas00052]
D CMASS_02445 galM; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CMASS_02465 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CMASS_07345 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CMASS_02460 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CMASS_06155 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CMASS_03325 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CMASS_07160 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CMASS_09740 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CMASS_04595 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CMASS_04095 bfrA; Beta-fructosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism [PATH:cmas00053]
D CMASS_09540 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CMASS_08275 uidA; Beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D CMASS_02530 ulaA; Ascorbate-specific permease IIC component UlaA K03475 ulaA; ascorbate PTS system EIIC component
C 00500 Starch and sucrose metabolism [PATH:cmas00500]
D CMASS_04095 bfrA; Beta-fructosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CMASS_03325 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CMASS_04105 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CMASS_04490 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CMASS_06845 malP; Maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CMASS_07695 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D CMASS_04495 glgE; Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D CMASS_04100 glgA; Capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D CMASS_06910 glgX; Glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68]
D CMASS_08800 otsA; Trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D CMASS_08810 otsB; Trehalose-6-phosphate phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D CMASS_07160 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CMASS_03210 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cmas00520]
D CMASS_09575 nagZ; Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CMASS_08855 ptsG; PTS system glucose-specific EIICBA component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CMASS_08850 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D CMASS_08845 nagB; Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D CMASS_02035 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CMASS_02015 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CMASS_03615 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CMASS_08520 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CMASS_01205 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CMASS_07160 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CMASS_06080 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D CMASS_03325 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CMASS_09540 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CMASS_03505 UDP-galactose-4-epimerase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D CMASS_02465 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CMASS_07345 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CMASS_02460 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CMASS_06155 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CMASS_09740 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CMASS_03210 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CMASS_02650 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CMASS_00870 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CMASS_02620 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CMASS_02600 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CMASS_04105 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:cmas00620]
D CMASS_07420 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CMASS_07245 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CMASS_01145 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CMASS_06940 pflB2; Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CMASS_09315 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CMASS_09320 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CMASS_06850 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CMASS_02370 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CMASS_02490 cfiB2; 2-oxoglutarate carboxylase small subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CMASS_06790 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CMASS_08590 cat1; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CMASS_08760 poxB; Pyruvate dehydrogenase [ubiquinone] K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D CMASS_02520 putative FAD-linked oxidoreductase K18930 dld; D-lactate dehydrogenase
D CMASS_05835 putative metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CMASS_02360 cfiB1; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CMASS_06545 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CMASS_03805 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CMASS_09635 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CMASS_00835 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cmas00630]
D CMASS_03145 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D CMASS_05470 acn; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CMASS_02400 accD1; putative propionyl-CoA carboxylase beta chain 5 K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D CMASS_02370 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CMASS_02490 cfiB2; 2-oxoglutarate carboxylase small subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CMASS_00890 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
D CMASS_02515 glnA1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CMASS_07285 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CMASS_07325 glnA3; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CMASS_03755 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CMASS_07250 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CMASS_07255 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CMASS_01145 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CMASS_07260 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CMASS_06830 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CMASS_04140 odhA; 2-oxoglutarate dehydrogenase E1/E2 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D CMASS_03935 fdhA; Formate dehydrogenase subunit alpha precursor K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CMASS_03940 fdnG; Formate dehydrogenase, nitrate-inducible, major subunit precursor K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CMASS_03945 fdnH; Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CMASS_01765 amdA1; Acetamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00640 Propanoate metabolism [PATH:cmas00640]
D CMASS_09315 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CMASS_09320 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CMASS_01145 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CMASS_06940 pflB2; Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CMASS_10100 acuI; Acrylyl-CoA reductase AcuI K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D CMASS_02370 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CMASS_02490 cfiB2; 2-oxoglutarate carboxylase small subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CMASS_02400 accD1; putative propionyl-CoA carboxylase beta chain 5 K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D CMASS_02355 prpC2; 2-methylcitrate synthase 2 K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D CMASS_02345 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D CMASS_02350 bcpA; Carboxyvinyl-carboxyphosphonate phosphorylmutase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:cmas00650]
D CMASS_01160 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CMASS_01165 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CMASS_01155 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CMASS_01540 gabD1; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CMASS_02480 gabD2; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CMASS_02565 davD; Glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CMASS_08590 cat1; Succinyl-CoA:coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D CMASS_06940 pflB2; Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CMASS_07635 gutB; Sorbitol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism [PATH:cmas00660]
D CMASS_04725 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CMASS_04730 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CMASS_04670 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cmas00562]
D CMASS_00355 plcN; Non-hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D CMASS_06870 impA; Inositol-1-monophosphatase ImpA K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CMASS_05615 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cmas00190]
D CMASS_05250 NADH dehydrogenase-like protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D CMASS_01160 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CMASS_01165 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CMASS_01155 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CMASS_07185 aioB; Arsenite oxidase subunit AioB precursor K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CMASS_07180 petB; Cytochrome b6 K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D CMASS_07190 qcrC; Menaquinol-cytochrome c reductase cytochrome c subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D CMASS_05580 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CMASS_07195 ctaE; Cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D CMASS_08420 ctaD; Cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D CMASS_07205 ctaC; Cytochrome c oxidase subunit 2 precursor K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D CMASS_05570 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D CMASS_04445 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CMASS_04455 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CMASS_04450 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CMASS_04440 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CMASS_04460 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CMASS_04425 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CMASS_04435 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CMASS_04430 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CMASS_09110 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CMASS_03575 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CMASS_09185 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:cmas00680]
D CMASS_03935 fdhA; Formate dehydrogenase subunit alpha precursor K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CMASS_03940 fdnG; Formate dehydrogenase, nitrate-inducible, major subunit precursor K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CMASS_03945 fdnH; Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CMASS_03755 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CMASS_03675 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CMASS_10135 dhaK; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D CMASS_09365 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CMASS_03810 glpX; Fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CMASS_04595 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CMASS_09315 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CMASS_09320 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CMASS_01225 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CMASS_04665 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CMASS_03140 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:cmas00910]
D CMASS_01765 amdA1; Acetamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D CMASS_04365 aniA; Copper-containing nitrite reductase precursor K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D CMASS_03560 Nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CMASS_02515 glnA1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CMASS_07285 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CMASS_07325 glnA3; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CMASS_08975 arcC1; Carbamate kinase 1 K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CMASS_08910 mtcA2; Carbonic anhydrase 2 K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cmas00920]
D CMASS_05820 NAD(P)H-dependent FAD/FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D CMASS_09485 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CMASS_09490 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CMASS_03190 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CMASS_06455 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D CMASS_09495 cysH; Phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D CMASS_02625 sir; Sulfite reductase [ferredoxin] K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D CMASS_02375 sseA1; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CMASS_09390 sseA2; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CMASS_08535 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CMASS_08530 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CMASS_02235 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CMASS_08080 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cmas00061]
D CMASS_02370 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CMASS_02490 cfiB2; 2-oxoglutarate carboxylase small subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CMASS_07425 acpA; Acyl carrier protein K02078 acpP; acyl carrier protein
D CMASS_08310 Actinorhodin polyketide putative beta-ketoacyl synthase 1 K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D CMASS_07960 ped; (S)-1-Phenylethanol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CMASS_01215 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CMASS_07690 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cmas00071]
D CMASS_01215 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CMASS_07690 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CMASS_09135 Bifunctional P-450/NADPH-P450 reductase K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cmas00561]
D CMASS_06830 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CMASS_10135 dhaK; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D CMASS_09785 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CMASS_05045 yutF; putative hydrolase YutF K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D CMASS_07155 2-acyl-glycerophospho-ethanolamine acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CMASS_09700 fbpC; Diacylglycerol acyltransferase/mycolyltransferase Ag85C precursor K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122]
D CMASS_03505 UDP-galactose-4-epimerase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
C 00564 Glycerophospholipid metabolism [PATH:cmas00564]
D CMASS_04740 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CMASS_07155 2-acyl-glycerophospho-ethanolamine acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CMASS_00355 plcN; Non-hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D CMASS_03450 glpQ2; putative glycerophosphoryl diester phosphodiesterase 1 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CMASS_09505 cytoplasmic glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CMASS_09835 glpQ3; putative glycerophosphoryl diester phosphodiesterase 1 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CMASS_06590 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CMASS_06365 pgsA2; Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2 K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CMASS_09280 cls; Cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D CMASS_05945 pgsA1; CDP-diacylglycerol--inositol 3-phosphatidyltransferase
C 00565 Ether lipid metabolism
D CMASS_00355 plcN; Non-hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:cmas00600]
D CMASS_07440 Neutral ceramidase K12349 ASAH2; neutral ceramidase [EC:3.5.1.23]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D CMASS_05920 tesB; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cmas00230]
D CMASS_03610 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CMASS_08660 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CMASS_08740 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CMASS_03235 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CMASS_09330 purT; Phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D CMASS_08700 purL; Phosphoribosylformylglycinamidine synthase 2 K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D CMASS_08710 phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D CMASS_08705 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CMASS_08655 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CMASS_02425 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D CMASS_02430 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CMASS_08730 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CMASS_08735 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CMASS_03240 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CMASS_05875 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CMASS_05865 yhcR; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CMASS_00855 deoD; Purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CMASS_07035 yfiH; Laccase domain protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CMASS_05485 rihB; Pyrimidine-specific ribonucleoside hydrolase RihB K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1]
D CMASS_09095 hpt; Hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CMASS_02100 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CMASS_02105 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CMASS_07915 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CMASS_08370 Non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CMASS_02115 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CMASS_05705 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CMASS_01935 nrdE1; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CMASS_08435 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CMASS_01940 nrdF1; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CMASS_08425 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CMASS_07575 dgt; Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D CMASS_05870 relA; Bifunctional (p)ppGpp synthase/hydrolase relA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CMASS_01245 gppA1; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CMASS_03690 gppA2; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CMASS_01060 cyaB; Adenylate cyclase 2 K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D CMASS_09345 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CMASS_02300 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D CMASS_00385 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D CMASS_01825 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CMASS_05950 AP-4-A phosphorylase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D CMASS_09485 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CMASS_09490 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CMASS_08975 arcC1; Carbamate kinase 1 K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:cmas00240]
D CMASS_08955 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CMASS_08960 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CMASS_05415 pyrD; Dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D CMASS_09380 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CMASS_05715 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CMASS_06600 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CMASS_07915 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CMASS_02390 maf; Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CMASS_05110 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CMASS_05865 yhcR; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CMASS_02320 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CMASS_08950 pyrR; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CMASS_09545 dcd; Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D CMASS_01935 nrdE1; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CMASS_08435 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CMASS_01940 nrdF1; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CMASS_08425 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CMASS_02665 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CMASS_06065 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CMASS_03185 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CMASS_06400 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cmas00250]
D CMASS_06995 ansZ; L-asparaginase 2 precursor K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CMASS_07210 asnB; Putative asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CMASS_09520 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CMASS_08095 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CMASS_05385 aspA; Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D CMASS_05000 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CMASS_05005 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CMASS_09345 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CMASS_08735 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CMASS_08955 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CMASS_01540 gabD1; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CMASS_02480 gabD2; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CMASS_02565 davD; Glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CMASS_09470 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CMASS_02515 glnA1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CMASS_07285 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CMASS_07325 glnA3; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CMASS_08705 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CMASS_02035 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CMASS_08660 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cmas00260]
D CMASS_00850 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CMASS_00875 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CMASS_04345 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CMASS_04350 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CMASS_07305 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CMASS_03755 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CMASS_06830 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CMASS_01225 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CMASS_04665 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CMASS_03140 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CMASS_07250 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CMASS_07255 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CMASS_01145 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CMASS_07260 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CMASS_00450 betA; Oxygen-dependent choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D CMASS_00440 gbsA; Betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D CMASS_05825 sdaA1; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CMASS_06125 sdaA2; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CMASS_06135 sdaA3; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00270 Cysteine and methionine metabolism [PATH:cmas00270]
D CMASS_08535 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CMASS_08530 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CMASS_07720 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CMASS_00180 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CMASS_06960 xecA1; 2-hydroxypropyl-CoM lyase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CMASS_05690 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CMASS_09480 mtnN; Aminodeoxyfutalosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CMASS_07035 yfiH; Laccase domain protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CMASS_01210 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CMASS_00850 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CMASS_00875 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CMASS_04345 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CMASS_02235 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CMASS_08080 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D CMASS_02240 metZ; O-succinylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CMASS_07230 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CMASS_02375 sseA1; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CMASS_09390 sseA2; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CMASS_05825 sdaA1; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CMASS_06125 sdaA2; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CMASS_06135 sdaA3; L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CMASS_04665 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CMASS_03140 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:cmas00280]
D CMASS_07230 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CMASS_01145 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CMASS_02400 accD1; putative propionyl-CoA carboxylase beta chain 5 K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D CMASS_02370 accA1; Acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CMASS_02490 cfiB2; 2-oxoglutarate carboxylase small subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D CMASS_01340 garR; 2-hydroxy-3-oxopropionate reductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cmas00290]
D CMASS_04725 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CMASS_04730 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CMASS_04670 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CMASS_04650 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CMASS_07230 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CMASS_09520 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CMASS_00835 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cmas00300]
D CMASS_04345 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CMASS_00850 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CMASS_00875 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CMASS_06395 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CMASS_06405 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CMASS_04050 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CMASS_04060 dapE2; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CMASS_06285 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CMASS_04340 lysA2; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CMASS_07080 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CMASS_07075 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cmas00310]
D CMASS_01145 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CMASS_01540 gabD1; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CMASS_02480 gabD2; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CMASS_02565 davD; Glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:cmas00220]
D CMASS_08970 argF; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CMASS_05000 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CMASS_05005 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CMASS_09010 arcA; Arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D CMASS_08705 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CMASS_02515 glnA1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CMASS_07285 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CMASS_07325 glnA3; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CMASS_08975 arcC1; Carbamate kinase 1 K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CMASS_09520 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CMASS_09270 hypothetical protein K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1]
C 00330 Arginine and proline metabolism [PATH:cmas00330]
D CMASS_01255 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CMASS_09470 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CMASS_04995 rapL; L-lysine cyclodeaminase K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12]
D CMASS_07870 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CMASS_07860 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:cmas00340]
D CMASS_06875 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D CMASS_06880 hisH; Imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CMASS_02935 hisN; Histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D CMASS_04205 hutH2; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D CMASS_04210 hutU; Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D CMASS_04215 hutI; Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D CMASS_04185 hutG; Formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
C 00350 Tyrosine metabolism [PATH:cmas00350]
D CMASS_01540 gabD1; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CMASS_02480 gabD2; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CMASS_02565 davD; Glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CMASS_03580 Ureidoglycolate lyase K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5]
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism [PATH:cmas00380]
D CMASS_01145 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CMASS_09135 Bifunctional P-450/NADPH-P450 reductase K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
D CMASS_00890 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cmas00400]
D CMASS_07140 aroG; Phospho-2-dehydro-3-deoxyheptonate aldolase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CMASS_05760 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CMASS_05755 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CMASS_05765 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CMASS_02730 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CMASS_05770 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CMASS_06875 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D CMASS_06860 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CMASS_00665 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D CMASS_09045 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:cmas00430]
D CMASS_06710 ggt; Gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CMASS_08095 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CMASS_09320 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CMASS_09315 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:cmas00450]
D CMASS_08080 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D CMASS_07720 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CMASS_00180 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CMASS_06960 xecA1; 2-hydroxypropyl-CoM lyase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CMASS_05530 csd; putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CMASS_10230 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CMASS_09485 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CMASS_09490 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CMASS_03955 selD; Selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CMASS_03385 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cmas00460]
D CMASS_06710 ggt; Gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CMASS_06995 ansZ; L-asparaginase 2 precursor K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CMASS_03755 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CMASS_01765 amdA1; Acetamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00470 D-Amino acid metabolism [PATH:cmas00470]
D CMASS_02040 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CMASS_04745 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CMASS_08705 purQ; Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CMASS_08385 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CMASS_07065 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CMASS_06285 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CMASS_04340 lysA2; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cmas00480]
D CMASS_06710 ggt; Gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CMASS_02500 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D CMASS_09250 ybdK; Carboxylate-amine ligase YbdK K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D CMASS_07235 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CMASS_08035 pepN2; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CMASS_10220 pepN3; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CMASS_02250 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CMASS_05225 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CMASS_05595 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:cmas00515]
D CMASS_03370 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:cmas00514]
D CMASS_03370 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:cmas00542]
D CMASS_04415 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cmas00541]
D CMASS_03325 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CMASS_06155 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CMASS_09740 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CMASS_09540 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CMASS_01095 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CMASS_01125 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CMASS_01120 rmlD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D CMASS_02650 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CMASS_00870 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CMASS_02620 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CMASS_03615 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:cmas00550]
D CMASS_08520 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CMASS_01205 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CMASS_07050 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CMASS_07065 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CMASS_07080 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CMASS_04745 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CMASS_07075 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CMASS_07615 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CMASS_05405 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CMASS_07070 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CMASS_07055 murG1; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CMASS_07085 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CMASS_00245 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D CMASS_02295 dacF; D-alanyl-D-alanine carboxypeptidase DacF precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CMASS_09105 dacC; D-alanyl-D-alanine carboxypeptidase DacC precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CMASS_00825 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D CMASS_00820 cobyrinic acid a,c-diamide synthase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:cmas00552]
D CMASS_05405 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CMASS_04415 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cmas00543]
D CMASS_04415 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CMASS_08535 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cmas00730]
D CMASS_06665 thiC; Phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CMASS_05245 thiD; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D CMASS_04525 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CMASS_06680 thiO; Glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D CMASS_06045 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CMASS_06690 thiG; Thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D CMASS_06675 thiE; Thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CMASS_04755 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CMASS_02725 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CMASS_08990 phoA; Alkaline phosphatase H precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CMASS_01825 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:cmas00740]
D CMASS_05660 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CMASS_05670 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CMASS_05655 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CMASS_05665 ribE; Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CMASS_06425 ribF; Riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CMASS_05820 NAD(P)H-dependent FAD/FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
C 00750 Vitamin B6 metabolism [PATH:cmas00750]
D CMASS_07630 pdxY; Pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D CMASS_03140 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CMASS_07305 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CMASS_02930 pdxS; Pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cmas00760]
D CMASS_08405 pncB1; Nicotinate phosphoribosyltransferase pncB1 K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CMASS_00855 deoD; Purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CMASS_05865 yhcR; Endonuclease YhcR precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CMASS_07855 nadD; Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CMASS_08455 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D CMASS_06360 cinA; Putative competence-damage inducible protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D CMASS_08250 nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D CMASS_05060 ppnK; Inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D CMASS_01540 gabD1; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CMASS_02480 gabD2; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CMASS_02565 davD; Glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:cmas00770]
D CMASS_04650 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CMASS_04285 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CMASS_09045 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CMASS_03750 coaA; Pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D CMASS_05695 coaBC; Coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CMASS_04780 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CMASS_04915 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CMASS_08305 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CMASS_07230 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:cmas00780]
D CMASS_07960 ped; (S)-1-Phenylethanol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CMASS_00810 bioW; 6-carboxyhexanoate--CoA ligase K01906 bioW; 6-carboxyhexanoate--CoA ligase [EC:6.2.1.14]
D CMASS_00815 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CMASS_00805 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CMASS_00800 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CMASS_00375 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CMASS_02410 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cmas00785]
D CMASS_07265 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CMASS_07270 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CMASS_01145 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CMASS_07420 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CMASS_07245 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CMASS_04140 odhA; 2-oxoglutarate dehydrogenase E1/E2 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D CMASS_07250 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D CMASS_07255 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CMASS_07260 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:cmas00790]
D CMASS_09085 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CMASS_08990 phoA; Alkaline phosphatase H precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CMASS_00360 phoD1; Alkaline phosphatase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CMASS_00545 phoD2; Alkaline phosphatase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CMASS_07530 pld; Phospholipase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CMASS_09075 folB; putative dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CMASS_09070 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CMASS_04070 folP1; Inactive dihydropteroate synthase 2 K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CMASS_09080 folP2; Dihydropteroate synthase 1 K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CMASS_03180 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CMASS_07935 fgs; Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CMASS_05660 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CMASS_03760 pabB; Aminodeoxychorismate synthase component 1 K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85]
D CMASS_04385 moaA; Cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CMASS_04375 moaC2; Cyclic pyranopterin monophosphate synthase accessory protein 2 K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CMASS_00590 moaE1; Molybdopterin synthase catalytic subunit 1 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CMASS_00600 moeA1; Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CMASS_03330 moeA2; Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CMASS_04380 moeA3; Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:cmas00670]
D CMASS_03180 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CMASS_05375 fhs; Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CMASS_02225 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CMASS_03755 glyA1; Serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CMASS_03235 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CMASS_03240 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CMASS_05680 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CMASS_07255 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CMASS_03185 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CMASS_06400 thyX; Thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CMASS_00175 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cmas00860]
D CMASS_00720 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CMASS_04690 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CMASS_01300 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CMASS_01345 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CMASS_01315 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CMASS_01305 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CMASS_01330 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CMASS_01335 hemY; Protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D CMASS_05455 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CMASS_06030 putative heme peroxidase K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D CMASS_01310 cysG; Siroheme synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D CMASS_02645 sumT; Uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D CMASS_05580 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CMASS_05570 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D CMASS_07225 cobT; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D CMASS_07360 pspA2; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D CMASS_08275 uidA; Beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D CMASS_07480 copA1; Copper resistance protein A precursor K22552 mmcO; multicopper oxidase [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cmas00130]
D CMASS_01485 ubiE; Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CMASS_04685 dhbC; Isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2]
D CMASS_01470 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D CMASS_01450 L-Ala-D/L-Glu epimerase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D CMASS_01430 menE; 2-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D CMASS_01440 menB; 1,4-Dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D CMASS_01415 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cmas00900]
D CMASS_06045 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CMASS_06575 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CMASS_08865 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CMASS_03435 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CMASS_08860 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CMASS_06565 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CMASS_03835 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CMASS_07705 idi; Isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D CMASS_07120 (2E,6E)-farnesyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CMASS_03745 (2Z,6E)-farnesyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D CMASS_07615 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CMASS_05585 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cmas00523]
D CMASS_01095 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CMASS_01125 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CMASS_01120 rmlD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D CMASS_04685 dhbC; Isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D CMASS_01125 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:cmas00332]
D CMASS_07870 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CMASS_07860 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cmas00261]
D CMASS_09485 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D CMASS_09490 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CMASS_00850 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CMASS_00875 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CMASS_06395 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CMASS_06405 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cmas00521]
D CMASS_07160 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CMASS_06870 impA; Inositol-1-monophosphatase ImpA K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CMASS_01095 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CMASS_01125 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CMASS_01120 rmlD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CMASS_07160 glkA; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:cmas00525]
D CMASS_01095 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CMASS_01125 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis
D CMASS_00665 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D CMASS_07960 ped; (S)-1-Phenylethanol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:cmas00998]
D CMASS_07425 acpA; Acyl carrier protein K02078 acpP; acyl carrier protein
D CMASS_00285 sbnA; putative siderophore biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
C 00999 Biosynthesis of various plant secondary metabolites
D CMASS_05690 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
D CMASS_00285 sbnA; putative siderophore biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:cmas00362]
D CMASS_09000 catE; Catechol-2,3-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00627 Aminobenzoate degradation [PATH:cmas00627]
D CMASS_06790 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CMASS_09135 Bifunctional P-450/NADPH-P450 reductase K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
D CMASS_09000 catE; Catechol-2,3-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:cmas00622]
D CMASS_09000 catE; Catechol-2,3-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D CMASS_09000 catE; Catechol-2,3-dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cmas03020]
D CMASS_01570 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CMASS_01575 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CMASS_01855 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CMASS_05700 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D CMASS_03050 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cmas03010]
D CMASS_04905 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CMASS_06610 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CMASS_01715 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CMASS_01850 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CMASS_01805 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CMASS_09985 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CMASS_01625 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CMASS_01790 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CMASS_02000 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CMASS_01680 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CMASS_01845 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CMASS_01620 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CMASS_01840 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CMASS_03260 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CMASS_06415 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CMASS_06735 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CMASS_01730 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CMASS_03255 rpsR1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18
D CMASS_01705 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CMASS_07800 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CMASS_01535 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CMASS_01700 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CMASS_01685 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CMASS_01690 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CMASS_01760 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CMASS_01795 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CMASS_01560 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CMASS_09975 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CMASS_01555 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CMASS_01530 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CMASS_01995 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CMASS_01750 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CMASS_01815 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CMASS_01720 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CMASS_01860 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CMASS_01800 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CMASS_06660 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CMASS_04970 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CMASS_07900 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CMASS_01710 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CMASS_01695 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CMASS_01755 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CMASS_03595 ctc; General stress protein CTC K02897 RP-L25; large subunit ribosomal protein L25
D CMASS_07895 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CMASS_03270 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CMASS_01725 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CMASS_01810 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CMASS_03285 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D CMASS_03290 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CMASS_03265 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D CMASS_10275 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CMASS_04965 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CMASS_08450 ykgO; 50S ribosomal protein L36 2 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cmas00970]
D CMASS_00720 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CMASS_04690 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CMASS_04580 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CMASS_04605 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CMASS_04575 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CMASS_05795 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CMASS_05810 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CMASS_07600 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CMASS_05955 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CMASS_09800 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CMASS_08840 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CMASS_03385 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CMASS_05680 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CMASS_07940 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CMASS_10125 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CMASS_07005 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CMASS_08980 lysU; Lysine--tRNA ligase, heat inducible K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CMASS_09040 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CMASS_06505 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CMASS_05830 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CMASS_04980 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CMASS_04985 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CMASS_05015 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CMASS_02280 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cmas03060]
D CMASS_01820 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CMASS_01520 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CMASS_05610 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CMASS_05890 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CMASS_05885 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CMASS_05895 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CMASS_09885 yidC1; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CMASS_10260 yidC2; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CMASS_02705 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CMASS_05185 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CMASS_06745 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CMASS_06780 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CMASS_05325 tatAd; Sec-independent protein translocase protein TatAd K03116 tatA; sec-independent protein translocase protein TatA
D CMASS_04125 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D CMASS_05320 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D CMASS_06650 lepB1; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CMASS_06655 lepB2; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CMASS_06980 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cmas04122]
D CMASS_04525 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CMASS_02375 sseA1; Putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CMASS_09390 sseA2; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CMASS_04540 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CMASS_00590 moaE1; Molybdopterin synthase catalytic subunit 1 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CMASS_04385 moaA; Cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CMASS_00605 ThiS family protein K03636 moaD; sulfur-carrier protein
D CMASS_00585 moeZ1; putative adenylyltransferase/sulfurtransferase MoeZ K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D CMASS_06695 moeZ2; putative adenylyltransferase/sulfurtransferase MoeZ K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D CMASS_04375 moaC2; Cyclic pyranopterin monophosphate synthase accessory protein 2 K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CMASS_06685 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
D CMASS_05355 mpa; Proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase
C 03018 RNA degradation [PATH:cmas03018]
D CMASS_07905 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D CMASS_03675 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CMASS_06410 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CMASS_04220 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CMASS_04395 hypothetical protein K03628 rho; transcription termination factor Rho
D CMASS_06390 Putative ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CMASS_09465 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CMASS_02075 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CMASS_09200 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CMASS_03575 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CMASS_09185 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CMASS_10200 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cmas03030]
D CMASS_00830 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CMASS_04555 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CMASS_06915 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CMASS_06965 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CMASS_01065 dnaX2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CMASS_07820 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CMASS_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CMASS_09970 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CMASS_07560 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CMASS_01920 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D CMASS_08115 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CMASS_09980 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CMASS_07360 pspA2; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D CMASS_06645 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CMASS_04895 polA2; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CMASS_04565 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cmas03410]
D CMASS_00960 pdg; Ultraviolet N-glycosylase/AP lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CMASS_04760 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CMASS_08915 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CMASS_00155 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CMASS_06800 fpg1; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CMASS_10035 nei2; Endonuclease 8 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CMASS_03200 nei1; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D CMASS_03350 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CMASS_03900 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D CMASS_02265 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CMASS_09275 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CMASS_04895 polA2; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CMASS_04565 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cmas03420]
D CMASS_03640 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CMASS_01460 uvrA1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D CMASS_04955 uvrA2; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D CMASS_04925 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D CMASS_05645 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D CMASS_02800 uvrD2; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CMASS_02810 uvrD3; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CMASS_03215 uvrD4; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CMASS_04895 polA2; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CMASS_04565 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CMASS_03050 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:cmas03430]
D CMASS_02800 uvrD2; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CMASS_02810 uvrD3; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CMASS_03215 uvrD4; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CMASS_03830 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CMASS_03825 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CMASS_01920 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D CMASS_08115 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CMASS_09980 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CMASS_06965 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CMASS_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CMASS_07820 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CMASS_01065 dnaX2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CMASS_00830 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CMASS_04555 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CMASS_06915 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CMASS_04565 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CMASS_07805 dpnM; Modification methylase DpnIIA K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:cmas03440]
D CMASS_01920 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D CMASS_08115 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CMASS_09980 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CMASS_00015 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CMASS_07620 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CMASS_00795 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D CMASS_06325 recombinase A K03553 recA; recombination protein RecA
D CMASS_04895 polA2; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CMASS_05905 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CMASS_05900 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CMASS_05910 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CMASS_04770 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CMASS_06965 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CMASS_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CMASS_07820 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CMASS_01065 dnaX2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CMASS_00830 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CMASS_04555 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CMASS_06915 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CMASS_05685 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:cmas03450]
D CMASS_04610 ykoV; putative DNA repair protein YkoV K10979 ku; DNA end-binding protein Ku
D CMASS_04615 Putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:cmas03250]
D CMASS_00215 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cmas02010]
D CMASS_04360 modA; Molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein
D CMASS_04355 cysW; Sulfate transport system permease protein CysW K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CMASS_00035 futA1; Iron uptake protein A1 precursor K02012 afuA; iron(III) transport system substrate-binding protein
D CMASS_00040 phnV; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02011 afuB; iron(III) transport system permease protein
D CMASS_00030 potA; Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CMASS_09400 osmF; Putative osmoprotectant uptake system substrate-binding protein OsmF precursor K05845 opuC; osmoprotectant transport system substrate-binding protein
D CMASS_09405 opuBB1; Choline transport system permease protein OpuBB K05846 opuBD; osmoprotectant transport system permease protein
D CMASS_09410 opuBB2; Choline transport system permease protein OpuBB K05846 opuBD; osmoprotectant transport system permease protein
D CMASS_09415 opuCA; Carnitine transport ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CMASS_00205 ugpB1; sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CMASS_03465 ugpB2; sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CMASS_00195 lacF; Lactose transport system permease protein LacF K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CMASS_03455 ugpA; sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CMASS_00200 lacG; Lactose transport system permease protein LacG K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CMASS_03460 araQ; L-arabinose transport system permease protein AraQ K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CMASS_03470 sugC; Trehalose import ATP-binding protein SugC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D CMASS_08620 pstS2; Phosphate-binding protein PstS 2 precursor K02040 pstS; phosphate transport system substrate-binding protein
D CMASS_08615 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D CMASS_08610 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D CMASS_08605 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CMASS_01150 metQ1; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D CMASS_02190 metQ2; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D CMASS_02180 metP; Methionine import system permease protein MetP K02072 metI; D-methionine transport system permease protein
D CMASS_02185 metN1; Methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein
D CMASS_01115 oppA; Oligopeptide-binding protein OppA precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D CMASS_01110 dppB1; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein
D CMASS_01105 oppC1; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D CMASS_01100 gsiA1; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein
D CMASS_06175 putative monoacyl phosphatidylinositol tetramannoside-binding protein LpqW precursor K13889 gsiB; glutathione transport system substrate-binding protein
D CMASS_06190 dppB2; Dipeptide transport system permease protein DppB K13890 gsiC; glutathione transport system permease protein
D CMASS_06185 oppC2; Oligopeptide transport system permease protein OppC K13891 gsiD; glutathione transport system permease protein
D CMASS_06180 gsiA2; Glutathione import ATP-binding protein GsiA K13892 gsiA; glutathione transport system ATP-binding protein
D CMASS_02175 yhfQ; Putative ABC transporter substrate-binding lipoprotein YhfQ precursor K25286 fagD; iron-siderophore transport system substrate-binding protein
D CMASS_07385 yfiY; putative siderophore-binding lipoprotein YfiY precursor K25286 fagD; iron-siderophore transport system substrate-binding protein
D CMASS_02170 fepD1; Ferric enterobactin transport system permease protein FepD K23186 fepD; iron-siderophore transport system permease protein
D CMASS_02165 fepG1; Ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein
D CMASS_07395 fepG2; Ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein
D CMASS_02160 yusV1; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D CMASS_07400 yusV2; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D CMASS_01365 troA; Periplasmic zinc-binding protein TroA precursor K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D CMASS_01355 mntB2; Manganese transport system membrane protein MntB K11708 troC; manganese/zinc/iron transport system permease protein
D CMASS_01350 mntB1; Manganese transport system membrane protein MntB K11709 troD; manganese/zinc/iron transport system permease protein
D CMASS_01360 znuC; High-affinity zinc uptake system ATP-binding protein ZnuC K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D CMASS_06335 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D CMASS_06345 ecfT; Energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D CMASS_06340 bioM; Biotin transport ATP-binding protein BioM K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D CMASS_01605 ykoC; Putative HMP/thiamine permease protein YkoC K16785 ecfT; energy-coupling factor transport system permease protein
D CMASS_00560 tagG; Teichoic acid translocation permease protein TagG K09690 wzm; homopolymeric O-antigen transport system permease protein
D CMASS_00555 tagH; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CMASS_10055 FtsX-like permease family protein K09813 hrtB; hemin transport system permease protein
D CMASS_10050 metN2; Methionine import ATP-binding protein MetN 2 K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D CMASS_00310 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D CMASS_00315 yxlF1; putative ABC transporter ATP-binding protein YxlF K20490 nisF; lantibiotic transport system ATP-binding protein
D CMASS_02960 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CMASS_02955 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CMASS_08680 Putative multidrug export ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CMASS_08685 putative ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS) [PATH:cmas02060]
D CMASS_06250 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CMASS_06260 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D CMASS_08855 ptsG; PTS system glucose-specific EIICBA component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CMASS_04910 bglF; PTS system beta-glucoside-specific EIIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CMASS_02555 manP; PTS system mannose-specific EIIBCA component K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191]
D CMASS_02530 ulaA; Ascorbate-specific permease IIC component UlaA K03475 ulaA; ascorbate PTS system EIIC component
D CMASS_06255 lacC; Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:cmas03070]
D CMASS_05890 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CMASS_05885 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CMASS_01520 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CMASS_05610 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CMASS_01820 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CMASS_05895 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CMASS_09885 yidC1; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CMASS_10260 yidC2; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CMASS_02705 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CMASS_05185 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CMASS_06780 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CMASS_06745 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CMASS_05325 tatAd; Sec-independent protein translocase protein TatAd K03116 tatA; sec-independent protein translocase protein TatA
D CMASS_04125 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D CMASS_05320 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cmas02020]
D CMASS_08990 phoA; Alkaline phosphatase H precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CMASS_00360 phoD1; Alkaline phosphatase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CMASS_00545 phoD2; Alkaline phosphatase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CMASS_07530 pld; Phospholipase D precursor K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CMASS_01230 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D CMASS_01235 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D CMASS_08620 pstS2; Phosphate-binding protein PstS 2 precursor K02040 pstS; phosphate transport system substrate-binding protein
D CMASS_05570 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D CMASS_03295 htrA; Putative serine protease HtrA K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D CMASS_02685 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D CMASS_02670 mtrA1; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D CMASS_00005 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CMASS_00315 yxlF1; putative ABC transporter ATP-binding protein YxlF K20490 nisF; lantibiotic transport system ATP-binding protein
D CMASS_00310 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D CMASS_08040 dcuB; Anaerobic C4-dicarboxylate transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D CMASS_02860 desK1; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D CMASS_02855 vraR; Response regulator protein VraR K07693 desR; two-component system, NarL family, response regulator DesR
D CMASS_01005 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CMASS_01010 hypothetical protein K12510 tadB; tight adherence protein B
D CMASS_02515 glnA1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CMASS_07285 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CMASS_07325 glnA3; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CMASS_04485 dctA1; Aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D CMASS_00955 crp; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CMASS_07375 ptpA; putative low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cmas02024]
D CMASS_01210 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CMASS_07140 aroG; Phospho-2-dehydro-3-deoxyheptonate aldolase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CMASS_01215 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CMASS_07690 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CMASS_00955 crp; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CMASS_05670 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CMASS_01115 oppA; Oligopeptide-binding protein OppA precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D CMASS_01110 dppB1; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein
D CMASS_01105 oppC1; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D CMASS_01100 gsiA1; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein
D CMASS_05880 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CMASS_07745 hbpA; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CMASS_08070 dppA; Periplasmic dipeptide transport protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CMASS_07750 gsiC1; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CMASS_08065 gsiC2; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CMASS_07755 gsiD; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CMASS_08060 ddpC; putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CMASS_07760 gsiA3; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CMASS_08055 gsiA4; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CMASS_09885 yidC1; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CMASS_10260 yidC2; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CMASS_01520 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CMASS_05610 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CMASS_01820 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CMASS_05895 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CMASS_02705 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CMASS_05185 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CMASS_06780 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CMASS_06745 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CMASS_00355 plcN; Non-hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
D CMASS_00315 yxlF1; putative ABC transporter ATP-binding protein YxlF K20490 nisF; lantibiotic transport system ATP-binding protein
D CMASS_00310 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D CMASS_06085 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CMASS_03675 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cmas01501]
D CMASS_09575 nagZ; Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CMASS_01115 oppA; Oligopeptide-binding protein OppA precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D CMASS_01110 dppB1; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein
D CMASS_01105 oppC1; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D CMASS_01100 gsiA1; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein
D CMASS_07085 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cmas01502]
D CMASS_04745 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CMASS_02040 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CMASS_07075 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CMASS_07070 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CMASS_07055 murG1; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cmas01503]
D CMASS_10240 lytC; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CMASS_00215 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cmas01000]
C 01001 Protein kinases [BR:cmas01001]
D CMASS_09310 pknG; Serine/threonine-protein kinase PknG K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1]
D CMASS_00235 pknB; Serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CMASS_00240 pknA; Serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CMASS_07135 pknL; Serine/threonine-protein kinase PknL K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D CMASS_01230 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D CMASS_02685 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D CMASS_08750 tcrY; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CMASS_02860 desK1; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cmas01009]
D CMASS_00255 pstP; PP2C-family Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:cmas01002]
D CMASS_06980 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CMASS_03890 pcp; Pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D CMASS_02115 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CMASS_07170 putative endopeptidase precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CMASS_08660 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CMASS_02035 glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CMASS_07210 asnB; Putative asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CMASS_03920 yraA; Putative cysteine protease YraA K05520 yhbO; deglycase [EC:3.5.1.124]
D CMASS_07880 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CMASS_09820 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D CMASS_08035 pepN2; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CMASS_10220 pepN3; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CMASS_00480 pepO; Neutral endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D CMASS_07235 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CMASS_04060 dapE2; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CMASS_09210 dapE3; putative succinyl-diaminopimelate desuccinylase K23980 tpdA; cysteinylglycine-S-conjugate dipeptidase [EC:3.4.13.23]
D CMASS_06560 map; Methionine aminopeptidase 2 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CMASS_09090 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CMASS_00295 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D CMASS_03405 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D CMASS_03415 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D CMASS_03295 htrA; Putative serine protease HtrA K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D CMASS_01880 Subtilisin BL K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D CMASS_08725 ptrB; Protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D CMASS_02295 dacF; D-alanyl-D-alanine carboxypeptidase DacF precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CMASS_09105 dacC; D-alanyl-D-alanine carboxypeptidase DacC precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CMASS_07965 clpP1; ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CMASS_07970 clpP2; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CMASS_02830 lon; Lon protease K07177 K07177; Lon-like protease
D CMASS_06240 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CMASS_06650 lepB1; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CMASS_06655 lepB2; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CMASS_06710 ggt; Gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C 01003 Glycosyltransferases [BR:cmas01003]
D CMASS_05280 Undecaprenyl-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D CMASS_03370 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D CMASS_05935 pimA1; GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D CMASS_07165 pimB1; GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D CMASS_01480 mgtA1; GDP-mannose-dependent alpha-mannosyltransferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D CMASS_04100 glgA; Capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D CMASS_04415 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CMASS_07125 hypothetical protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D CMASS_05555 hypothetical protein K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D CMASS_00495 embC; putative arabinosyltransferase C K11387 embC; arabinosyltransferase C [EC:2.4.2.-]
D CMASS_00510 aftA; Arabinofuranosyltransferase AftA K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46]
D CMASS_09705 hypothetical protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-]
D CMASS_06020 Alpha-(1->3)-arabinofuranosyltransferase K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47]
D CMASS_09590 aftD; Alpha-(1->3)-arabinofuranosyltransferase K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
D CMASS_00550 glfT1; Galactofuranosyl transferase GlfT1 K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D CMASS_09720 glfT2; Galactofuranosyl transferase GlfT2 K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
D CMASS_02595 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D CMASS_08800 otsA; Trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D CMASS_04075 gpgS; Glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cmas01005]
D CMASS_04415 wecA; Decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cmas01011]
D CMASS_08520 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CMASS_01205 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CMASS_07050 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CMASS_07065 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CMASS_07080 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CMASS_04745 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CMASS_02040 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CMASS_08385 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CMASS_07070 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CMASS_07055 murG1; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CMASS_05405 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CMASS_10215 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CMASS_07085 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CMASS_00245 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D CMASS_02295 dacF; D-alanyl-D-alanine carboxypeptidase DacF precursor K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CMASS_09105 dacC; D-alanyl-D-alanine carboxypeptidase DacC precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D CMASS_07170 putative endopeptidase precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CMASS_07880 Sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CMASS_05785 putative aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CMASS_10240 lytC; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cmas01004]
D CMASS_08310 Actinorhodin polyketide putative beta-ketoacyl synthase 1 K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D CMASS_07960 ped; (S)-1-Phenylethanol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CMASS_05920 tesB; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D CMASS_09675 ppsA; Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA K12437 pks13; polyketide synthase 13
D CMASS_01215 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CMASS_07690 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CMASS_09680 Long-chain-fatty-acid--AMP ligase FadD32 K12428 fadD32; fatty acid CoA ligase FadD32
D CMASS_07155 2-acyl-glycerophospho-ethanolamine acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:cmas01006]
D CMASS_07120 (2E,6E)-farnesyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CMASS_03745 (2Z,6E)-farnesyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D CMASS_07615 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CMASS_06290 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CMASS_01415 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D CMASS_05580 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CMASS_09710 Decaprenyl-phosphate phosphoribosyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45]
C 01007 Amino acid related enzymes [BR:cmas01007]
D CMASS_00720 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CMASS_04690 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CMASS_05015 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CMASS_02280 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CMASS_08840 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CMASS_09040 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CMASS_03385 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CMASS_07005 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CMASS_07940 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CMASS_10125 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CMASS_08980 lysU; Lysine--tRNA ligase, heat inducible K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CMASS_05810 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CMASS_05830 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CMASS_07600 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CMASS_09800 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CMASS_06505 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CMASS_05955 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CMASS_05795 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CMASS_04980 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CMASS_04985 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CMASS_09520 alaA; Glutamate-pyruvate aminotransferase AlaA K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D CMASS_00815 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CMASS_07720 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CMASS_00805 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CMASS_01345 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CMASS_07230 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CMASS_03140 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450 [BR:cmas00199]
D CMASS_09135 Bifunctional P-450/NADPH-P450 reductase K14338 cypD_E; cytochrome P450 / NADPH-cytochrome P450 reductase [EC:1.14.14.1 1.6.2.4]
D CMASS_03910 cypC; Fatty-acid peroxygenase K15629 CYP152A; fatty-acid peroxygenase [EC:1.11.2.4]
C 00194 Photosynthesis proteins [BR:cmas00194]
D CMASS_04460 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CMASS_04455 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CMASS_04450 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CMASS_04445 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CMASS_04440 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CMASS_04435 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CMASS_04430 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CMASS_04425 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cmas03000]
D CMASS_06205 oxyR; putative hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D CMASS_06245 glpR; Glycerol-3-phosphate regulon repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CMASS_08255 cytR; HTH-type transcriptional repressor CytR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CMASS_06905 tetR; Tetracycline repressor protein class E K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D CMASS_05475 acnR; HTH-type transcriptional repressor AcnR K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
D CMASS_08525 transcriptional regulator MalT K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
D CMASS_09450 hspR; Putative heat shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D CMASS_07605 zur; Zinc uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CMASS_00955 crp; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CMASS_09165 Bacterial regulatory protein, arsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CMASS_03865 cmtR1; HTH-type transcriptional regulator CmtR K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D CMASS_07475 cmtR2; HTH-type transcriptional regulator CmtR K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D CMASS_02910 Transcriptional regulator PadR-like family protein K10947 K10947; PadR family transcriptional regulator
D CMASS_06150 dtxR; Diphtheria toxin repressor K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D CMASS_01370 ideR1; Iron-dependent repressor IdeR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D CMASS_01925 ideR2; Iron-dependent repressor IdeR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D CMASS_02410 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CMASS_00280 hypothetical protein K07729 K07729; putative transcriptional regulator
D CMASS_03070 Helix-turn-helix protein K07729 K07729; putative transcriptional regulator
D CMASS_04040 transcription factor K07729 K07729; putative transcriptional regulator
D CMASS_09470 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CMASS_00935 whiB1; Transcriptional regulator WhiB4 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CMASS_02080 whiB2; putative transcriptional regulator WhiB3 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CMASS_02605 whmD; Transcriptional regulator WhiB2 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CMASS_02760 whiB3; Transcriptional regulator WhiB1 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D CMASS_08580 csoR; Copper-sensing transcriptional repressor CsoR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CMASS_10245 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CMASS_08870 carD; RNA polymerase-binding transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D CMASS_09035 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D CMASS_07660 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D CMASS_08950 pyrR; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CMASS_10195 hypothetical protein K07735 algH; putative transcriptional regulator
D CMASS_06230 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D CMASS_07100 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cmas03021]
D CMASS_03050 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D CMASS_01855 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CMASS_01570 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CMASS_01575 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CMASS_05700 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CMASS_06085 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D CMASS_06145 sigB; RNA polymerase sigma factor SigB K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D CMASS_00885 sigC; ECF RNA polymerase sigma factor SigC K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CMASS_02085 sigD; ECF RNA polymerase sigma factor SigD K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CMASS_02740 sigH; ECF RNA polymerase sigma factor SigH K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CMASS_04115 sigE; ECF RNA polymerase sigma factor SigE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CMASS_06475 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA
D CMASS_05740 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D CMASS_01525 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D CMASS_03725 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CMASS_04395 hypothetical protein K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cmas03019]
D CMASS_07905 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D CMASS_06805 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CMASS_06390 Putative ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CMASS_08160 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CMASS_04220 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CMASS_03675 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CMASS_06410 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CMASS_04395 hypothetical protein K03628 rho; transcription termination factor Rho
D CMASS_09465 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CMASS_02075 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CMASS_09200 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CMASS_03575 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CMASS_09185 Polyphosphate kinase 2 (PPK2) K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CMASS_10200 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D CMASS_05640 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ
D CMASS_05315 ski2-like helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D CMASS_06225 hrpB2; ATP-dependent RNA helicase HrpB K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D CMASS_00425 hrpB1; ATP-dependent RNA helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:cmas03011]
D CMASS_04905 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CMASS_06610 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CMASS_01715 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CMASS_01850 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CMASS_01805 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CMASS_09985 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CMASS_01625 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CMASS_01790 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CMASS_02000 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CMASS_01680 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CMASS_01845 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CMASS_01620 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CMASS_01840 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CMASS_03260 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CMASS_06415 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CMASS_06735 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CMASS_01730 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CMASS_03255 rpsR1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18
D CMASS_01705 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CMASS_07800 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CMASS_01535 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CMASS_01700 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CMASS_01685 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CMASS_01690 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CMASS_01760 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CMASS_01795 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CMASS_09975 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CMASS_01555 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CMASS_01530 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CMASS_01560 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CMASS_01995 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CMASS_01750 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CMASS_01815 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CMASS_01720 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CMASS_01860 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CMASS_01800 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CMASS_06660 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CMASS_04970 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CMASS_07900 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CMASS_01710 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CMASS_01695 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CMASS_01755 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CMASS_07895 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CMASS_03270 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CMASS_01725 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CMASS_01810 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CMASS_03285 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D CMASS_03290 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CMASS_03265 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D CMASS_10275 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CMASS_04965 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CMASS_08450 ykgO; 50S ribosomal protein L36 2 K02919 RP-L36; large subunit ribosomal protein L36
D CMASS_03595 ctc; General stress protein CTC K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:cmas03009]
D CMASS_06805 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CMASS_08160 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CMASS_07625 era; GTPase Era K03595 era; GTPase
D CMASS_07890 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-]
D CMASS_06475 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA
D CMASS_05740 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D CMASS_01525 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D CMASS_03430 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CMASS_05675 rpe; Ribulose-phosphate 3-epimerase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CMASS_04775 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CMASS_07650 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CMASS_10255 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CMASS_07095 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CMASS_03375 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CMASS_05055 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CMASS_04090 rlmAII; 23S rRNA (guanine(748)-N(1))-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D CMASS_08835 Putative TrmH family tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CMASS_06585 rlmN; putative dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CMASS_09915 rluA; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CMASS_05105 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CMASS_06975 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CMASS_00105 carB; rRNA methyltransferase K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D CMASS_02060 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CMASS_06730 rimM; Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D CMASS_07905 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D CMASS_05790 yrrK; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CMASS_04220 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CMASS_02725 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CMASS_05115 der; GTPase Der K03977 engA; GTPase
D CMASS_06270 hflX; GTPase HflX K03665 hflX; GTPase
D CMASS_04410 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CMASS_05870 relA; Bifunctional (p)ppGpp synthase/hydrolase relA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CMASS_06460 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CMASS_06480 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP
D CMASS_00465 hypothetical protein K14761 rlbA; ribosome-associated protein
D CMASS_07850 rsfS; Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D CMASS_07640 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D CMASS_03855 ychF; Ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase
D CMASS_06810 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cmas03016]
D CMASS_00720 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CMASS_04690 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CMASS_06505 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CMASS_07005 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CMASS_10125 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CMASS_03385 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CMASS_09040 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CMASS_08980 lysU; Lysine--tRNA ligase, heat inducible K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CMASS_05810 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CMASS_05795 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CMASS_07600 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CMASS_05955 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CMASS_09800 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CMASS_08840 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CMASS_07940 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CMASS_05830 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CMASS_04980 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CMASS_04985 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CMASS_05015 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CMASS_02280 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CMASS_06115 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CMASS_05360 trmI; tRNA (adenine(58)-N(1))-methyltransferase TrmI K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D CMASS_09640 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CMASS_01865 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CMASS_06430 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CMASS_04525 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CMASS_04410 ywlC; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CMASS_06290 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CMASS_03955 selD; Selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CMASS_03190 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CMASS_10270 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CMASS_08375 rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D CMASS_06040 rnd; Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D CMASS_06315 miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CMASS_06725 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CMASS_02220 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CMASS_04975 Putative TrmH family tRNA/rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D CMASS_09915 rluA; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CMASS_04540 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CMASS_08645 putative global regulator K06980 ygfZ; tRNA-modifying protein YgfZ
D CMASS_00700 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CMASS_09100 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CMASS_02055 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CMASS_02065 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CMASS_02045 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CMASS_06410 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cmas03012]
D CMASS_06465 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CMASS_04960 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CMASS_06605 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D CMASS_01635 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D CMASS_01630 fusA; Elongation factor G K02355 fusA; elongation factor G
D CMASS_03965 selB; Selenocysteine-specific elongation factor K03833 selB; selenocysteine-specific elongation factor
D CMASS_04400 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CMASS_06595 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor
D CMASS_04405 prmC; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CMASS_03555 pth1; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CMASS_03585 pth2; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CMASS_01835 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CMASS_05745 efp; Elongation factor P K02356 efp; elongation factor P
D CMASS_02945 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D CMASS_03545 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:cmas03110]
D CMASS_09395 clpB; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CMASS_08935 clpC1; ATP-dependent Clp protease ATP-binding subunit ClpC1 K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CMASS_07950 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CMASS_09465 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CMASS_02075 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CMASS_09200 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CMASS_07655 dnaJ1; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CMASS_09455 dnaJ2; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CMASS_09460 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D CMASS_06945 hslR; Heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D CMASS_02070 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D CMASS_09090 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CMASS_04425 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CMASS_05965 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D CMASS_01880 Subtilisin BL K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D CMASS_00215 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CMASS_05845 cypB; Peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CMASS_09955 trxC; Putative thioredoxin-2 K03671 TXN; thioredoxin
D CMASS_10235 trxA; Thioredoxin-1 K03671 TXN; thioredoxin
D CMASS_04480 Thioredoxin C-1 K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:cmas04131]
D CMASS_07915 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CMASS_03570 gap1; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CMASS_05625 gap2; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CMASS_01225 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CMASS_06850 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system [BR:cmas04121]
D CMASS_05345 pup; Prokaryotic ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:cmas03051]
D CMASS_05355 mpa; Proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase
D CMASS_05340 pafA; Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D CMASS_05335 hypothetical protein K13572 pafB; proteasome accessory factor B
D CMASS_05330 hypothetical protein K13573 pafC; proteasome accessory factor C
D CMASS_05350 dop; Pup deamidase/depupylase K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:cmas03032]
D CMASS_00005 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CMASS_09970 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CMASS_07560 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CMASS_01920 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D CMASS_08115 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CMASS_09980 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CMASS_06965 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CMASS_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CMASS_07820 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CMASS_01065 dnaX2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CMASS_00830 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CMASS_04555 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CMASS_06915 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CMASS_07360 pspA2; Phosphoserine phosphatase 1 K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D CMASS_06645 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CMASS_04895 polA2; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CMASS_04565 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CMASS_07805 dpnM; Modification methylase DpnIIA K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CMASS_00065 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CMASS_00025 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CMASS_01050 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cmas03036]
D CMASS_06805 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CMASS_09870 lsr2; Nucleoid-associated protein Lsr2 K26249 lsr2; nucleoid-associated protein Lsr2
D CMASS_00005 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CMASS_06785 smc1; Chromosome partition protein Smc K03529 smc; chromosome segregation protein
D CMASS_05095 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D CMASS_05100 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D CMASS_02955 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CMASS_07085 pbpB; Penicillin-binding protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CMASS_01975 eccCb1; ESX-1 secretion system protein EccCb1 K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CMASS_06380 spoIIIE; DNA translocase SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CMASS_07045 ftsQ; Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D CMASS_07060 ftsW2; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D CMASS_02960 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CMASS_07040 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CMASS_10240 lytC; N-acetylmuramoyl-L-alanine amidase LytC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CMASS_07025 sepF; Cell division protein SepF K09772 sepF; cell division inhibitor SepF
D CMASS_05090 soj1; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CMASS_10250 soj2; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CMASS_10245 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CMASS_10255 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CMASS_06620 xerD2; Tyrosine recombinase XerD K03733 xerC; integrase/recombinase XerC
D CMASS_05085 xerD1; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D CMASS_04130 ylxH; Flagellum site-determining protein YlxH K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CMASS_05630 whiA; Putative sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:cmas03400]
D CMASS_03355 ogt; Methylated-DNA--protein-cysteine methyltransferase, constitutive K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CMASS_01550 phrA; Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D CMASS_04760 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CMASS_00155 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CMASS_08915 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CMASS_00960 pdg; Ultraviolet N-glycosylase/AP lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CMASS_03050 Type III restriction enzyme, res subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D CMASS_04175 nudG; CTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CMASS_09295 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CMASS_06065 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CMASS_00430 alkB; Alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D CMASS_03900 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D CMASS_03350 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D CMASS_06800 fpg1; Formamidopyrimidine-DNA glycosylase 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CMASS_10035 nei2; Endonuclease 8 1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CMASS_03200 nei1; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D CMASS_02265 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CMASS_09275 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CMASS_04565 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CMASS_04895 polA2; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CMASS_01460 uvrA1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D CMASS_04955 uvrA2; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D CMASS_04925 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D CMASS_05645 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D CMASS_02800 uvrD2; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CMASS_02810 uvrD3; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CMASS_03215 uvrD4; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CMASS_01570 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CMASS_01575 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CMASS_01855 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CMASS_05700 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CMASS_03640 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CMASS_03830 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CMASS_03825 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CMASS_06965 dnaE2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CMASS_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CMASS_07820 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CMASS_01065 dnaX2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CMASS_00830 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CMASS_04555 polC1; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CMASS_06915 polC2; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CMASS_01920 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D CMASS_08115 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CMASS_09980 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CMASS_07805 dpnM; Modification methylase DpnIIA K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CMASS_06325 recombinase A K03553 recA; recombination protein RecA
D CMASS_05905 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CMASS_05900 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CMASS_05910 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CMASS_05685 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CMASS_08885 hypothetical protein K04485 radA; DNA repair protein RadA/Sms
D CMASS_00015 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CMASS_04770 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CMASS_07620 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CMASS_00795 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D CMASS_05065 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CMASS_04610 ykoV; putative DNA repair protein YkoV K10979 ku; DNA end-binding protein Ku
D CMASS_04615 Putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D CMASS_00065 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CMASS_00025 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CMASS_01050 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CMASS_07000 dinB2; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CMASS_06240 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CMASS_02145 dinB1; DNA polymerase IV K14161 imuB; protein ImuB
D CMASS_02195 dnaE1; Error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D CMASS_06320 recX; Regulatory protein RecX K03565 recX; regulatory protein
D CMASS_08410 dinG; putative ATP-dependent helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D CMASS_03195 putative ATP-dependent helicase Lhr K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D CMASS_04735 mutT1; Putative mutator protein MutT4 K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D CMASS_05080 nudF; ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D CMASS_01935 nrdE1; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CMASS_08435 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CMASS_01940 nrdF1; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CMASS_08425 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CMASS_06455 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:cmas03029]
D CMASS_06465 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CMASS_04960 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CMASS_06605 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D CMASS_01635 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D CMASS_01630 fusA; Elongation factor G K02355 fusA; elongation factor G
D CMASS_07625 era; GTPase Era K03595 era; GTPase
D CMASS_05015 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CMASS_10125 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CMASS_05810 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CMASS_07600 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CMASS_09040 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CMASS_04580 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CMASS_04605 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CMASS_04575 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CMASS_01920 ssbB; Single-stranded DNA-binding protein SsbB K03111 ssb; single-strand DNA-binding protein
D CMASS_08115 ssb1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CMASS_09980 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CMASS_09465 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CMASS_09460 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D CMASS_02075 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CMASS_09200 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CMASS_02070 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D CMASS_07655 dnaJ1; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CMASS_09455 dnaJ2; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CMASS_04525 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CMASS_04130 ylxH; Flagellum site-determining protein YlxH K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CMASS_05580 ctaB; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CMASS_05570 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D CMASS_09885 yidC1; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CMASS_10260 yidC2; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cmas02000]
D CMASS_08680 Putative multidrug export ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CMASS_08685 putative ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CMASS_07715 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CMASS_03445 putative ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D CMASS_04360 modA; Molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein
D CMASS_04355 cysW; Sulfate transport system permease protein CysW K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CMASS_00035 futA1; Iron uptake protein A1 precursor K02012 afuA; iron(III) transport system substrate-binding protein
D CMASS_00040 phnV; Putative 2-aminoethylphosphonate transport system permease protein PhnV K02011 afuB; iron(III) transport system permease protein
D CMASS_00030 potA; Spermidine/putrescine import ATP-binding protein PotA K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CMASS_09400 osmF; Putative osmoprotectant uptake system substrate-binding protein OsmF precursor K05845 opuC; osmoprotectant transport system substrate-binding protein
D CMASS_09405 opuBB1; Choline transport system permease protein OpuBB K05846 opuBD; osmoprotectant transport system permease protein
D CMASS_09410 opuBB2; Choline transport system permease protein OpuBB K05846 opuBD; osmoprotectant transport system permease protein
D CMASS_09415 opuCA; Carnitine transport ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CMASS_00205 ugpB1; sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CMASS_03465 ugpB2; sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CMASS_00195 lacF; Lactose transport system permease protein LacF K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CMASS_03455 ugpA; sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CMASS_00200 lacG; Lactose transport system permease protein LacG K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CMASS_03460 araQ; L-arabinose transport system permease protein AraQ K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CMASS_03470 sugC; Trehalose import ATP-binding protein SugC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D CMASS_08620 pstS2; Phosphate-binding protein PstS 2 precursor K02040 pstS; phosphate transport system substrate-binding protein
D CMASS_08615 pstC; Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D CMASS_08610 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D CMASS_08605 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CMASS_01150 metQ1; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D CMASS_02190 metQ2; D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D CMASS_02180 metP; Methionine import system permease protein MetP K02072 metI; D-methionine transport system permease protein
D CMASS_02185 metN1; Methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein
D CMASS_09305 glnH; ABC transporter glutamine-binding protein GlnH precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CMASS_01115 oppA; Oligopeptide-binding protein OppA precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D CMASS_01110 dppB1; Dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein
D CMASS_01105 oppC1; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D CMASS_01100 gsiA1; Glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein
D CMASS_06175 putative monoacyl phosphatidylinositol tetramannoside-binding protein LpqW precursor K13889 gsiB; glutathione transport system substrate-binding protein
D CMASS_06190 dppB2; Dipeptide transport system permease protein DppB K13890 gsiC; glutathione transport system permease protein
D CMASS_06185 oppC2; Oligopeptide transport system permease protein OppC K13891 gsiD; glutathione transport system permease protein
D CMASS_06180 gsiA2; Glutathione import ATP-binding protein GsiA K13892 gsiA; glutathione transport system ATP-binding protein
D CMASS_05880 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CMASS_07745 hbpA; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CMASS_08070 dppA; Periplasmic dipeptide transport protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CMASS_07750 gsiC1; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CMASS_08065 gsiC2; Glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CMASS_07755 gsiD; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CMASS_08060 ddpC; putative D,D-dipeptide transport system permease protein DdpC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CMASS_07760 gsiA3; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CMASS_08055 gsiA4; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CMASS_02175 yhfQ; Putative ABC transporter substrate-binding lipoprotein YhfQ precursor K25286 fagD; iron-siderophore transport system substrate-binding protein
D CMASS_07385 yfiY; putative siderophore-binding lipoprotein YfiY precursor K25286 fagD; iron-siderophore transport system substrate-binding protein
D CMASS_02170 fepD1; Ferric enterobactin transport system permease protein FepD K23186 fepD; iron-siderophore transport system permease protein
D CMASS_02165 fepG1; Ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein
D CMASS_07395 fepG2; Ferric enterobactin transport system permease protein FepG K23187 fepG; iron-siderophore transport system permease protein
D CMASS_02160 yusV1; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D CMASS_07400 yusV2; putative siderophore transport system ATP-binding protein YusV K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D CMASS_03000 fhuC; Iron(3+)-hydroxamate import ATP-binding protein FhuC K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D CMASS_00650 corrinoid ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CMASS_02985 yclQ; putative ABC transporter solute-binding protein YclQ precursor K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CMASS_00655 hmuU; Hemin transport system permease protein HmuU K02015 ABC.FEV.P; iron complex transport system permease protein
D CMASS_02990 feuB; Iron-uptake system permease protein FeuB K02015 ABC.FEV.P; iron complex transport system permease protein
D CMASS_02995 feuC; Iron-uptake system permease protein FeuC K02015 ABC.FEV.P; iron complex transport system permease protein
D CMASS_07390 fepD2; Ferric enterobactin transport system permease protein FepD K02015 ABC.FEV.P; iron complex transport system permease protein
D CMASS_00660 hmuV; Hemin import ATP-binding protein HmuV K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CMASS_04500 ylmA; putative ABC transporter ATP-binding protein YlmA K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CMASS_01365 troA; Periplasmic zinc-binding protein TroA precursor K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D CMASS_01355 mntB2; Manganese transport system membrane protein MntB K11708 troC; manganese/zinc/iron transport system permease protein
D CMASS_01350 mntB1; Manganese transport system membrane protein MntB K11709 troD; manganese/zinc/iron transport system permease protein
D CMASS_01360 znuC; High-affinity zinc uptake system ATP-binding protein ZnuC K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D CMASS_06335 bioY; Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D CMASS_06345 ecfT; Energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D CMASS_06340 bioM; Biotin transport ATP-binding protein BioM K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D CMASS_01605 ykoC; Putative HMP/thiamine permease protein YkoC K16785 ecfT; energy-coupling factor transport system permease protein
D CMASS_01600 ykoD; Putative HMP/thiamine import ATP-binding protein YkoD K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CMASS_01595 ykoE; Putative HMP/thiamine permease protein YkoE K16925 ykoE; energy-coupling factor transport system permease protein
D CMASS_08815 Periplasmic solute binding protein family protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D CMASS_08825 znuB; High-affinity zinc uptake system membrane protein ZnuB K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D CMASS_08820 putative ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D CMASS_00560 tagG; Teichoic acid translocation permease protein TagG K09690 wzm; homopolymeric O-antigen transport system permease protein
D CMASS_00555 tagH; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D CMASS_00310 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D CMASS_00315 yxlF1; putative ABC transporter ATP-binding protein YxlF K20490 nisF; lantibiotic transport system ATP-binding protein
D CMASS_10055 FtsX-like permease family protein K09813 hrtB; hemin transport system permease protein
D CMASS_10050 metN2; Methionine import ATP-binding protein MetN 2 K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D CMASS_02960 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CMASS_02955 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CMASS_02865 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D CMASS_02925 yxlG; putative transmembrane protein YxlG K01992 ABC-2.P; ABC-2 type transport system permease protein
D CMASS_03020 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CMASS_03055 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CMASS_05565 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D CMASS_09285 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CMASS_02870 ybhF1; putative ABC transporter ATP-binding protein YbhF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CMASS_02920 yxlF2; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CMASS_03025 yxlF3; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CMASS_03060 ybhF2; putative ABC transporter ATP-binding protein YbhF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CMASS_05560 drrA; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CMASS_06525 yxlF4; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CMASS_09290 yxlF5; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CMASS_02120 macB; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D CMASS_08495 ytrF; ABC transporter permease YtrF precursor K02004 ABC.CD.P; putative ABC transport system permease protein
D CMASS_02125 ytrE; ABC transporter ATP-binding protein YtrE K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CMASS_08500 bceA; Bacitracin export ATP-binding protein BceA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CMASS_05535 hypothetical protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CMASS_10175 Sodium Bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CMASS_06450 dinF; DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D CMASS_02545 iolT; Major myo-inositol transporter IolT K06609 iolT; MFS transporter, SP family, major inositol transporter
D CMASS_03390 yycB; putative transporter YycB K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D CMASS_02260 ydhP; Inner membrane transport protein YdhP K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D CMASS_08765 qacA; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D CMASS_00860 norB; Quinolone resistance protein NorB K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D CMASS_06250 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CMASS_06260 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D CMASS_08855 ptsG; PTS system glucose-specific EIICBA component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CMASS_04910 bglF; PTS system beta-glucoside-specific EIIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CMASS_02555 manP; PTS system mannose-specific EIIBCA component K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191]
D CMASS_02530 ulaA; Ascorbate-specific permease IIC component UlaA K03475 ulaA; ascorbate PTS system EIIC component
D CMASS_02805 kch; Voltage-gated potassium channel Kch K10716 kch; voltage-gated potassium channel
D CMASS_03310 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D CMASS_08085 ybiO; Moderate conductance mechanosensitive channel YbiO precursor K22044 ybiO; moderate conductance mechanosensitive channel
D CMASS_00620 Magnesium transporter MgtE K06213 mgtE; magnesium transporter
D CMASS_05235 corA; Magnesium transport protein CorA K03284 corA; magnesium transporter
D CMASS_07670 corC; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CMASS_07675 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CMASS_08270 uidB; Glucuronide carrier protein K16139 uidB; glucuronide carrier protein
D CMASS_04990 cycA; D-serine/D-alanine/glycine transporter K11738 ansP; L-asparagine permease
D CMASS_04055 gabP2; GABA permease K16237 aroP; aromatic amino acid permease
D CMASS_03660 arcD1; Arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D CMASS_09005 arcD2; Arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D CMASS_00735 czcD; Cadmium, cobalt and zinc/H(+)-K(+) antiporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D CMASS_09650 ydfJ3; Membrane protein YdfJ K20470 mmpL3; trehalose monomycolate/heme transporter
D CMASS_02535 ygbN; Inner membrane permease YgbN K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D CMASS_05380 dcuA; Anaerobic C4-dicarboxylate transporter DcuA K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D CMASS_08040 dcuB; Anaerobic C4-dicarboxylate transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D CMASS_04335 lutP; L-lactate permease K03303 lutP; lactate permease
D CMASS_00445 betT; High-affinity choline transport protein K02168 betT; choline/glycine/proline betaine transport protein
D CMASS_04235 putP; Sodium/proline symporter K11928 putP; sodium/proline symporter
D CMASS_04485 dctA1; Aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D CMASS_08995 gltS; Sodium/glutamate symport carrier protein K03312 gltS; glutamate:Na+ symporter, ESS family
D CMASS_09420 hypothetical protein K03312 gltS; glutamate:Na+ symporter, ESS family
D CMASS_00725 nhaG; Na(+)/H(+) antiporter NhaG K24163 nhaK; monovalent cation/hydrogen antiporter
D CMASS_03115 pbuG; Guanine/hypoxanthine permease PbuG K06901 pbuG; adenine/guanine/hypoxanthine permease
D CMASS_02550 sdaC1; Serine transporter K03837 sdaC; serine transporter
D CMASS_02570 sdaC2; Serine transporter K03837 sdaC; serine transporter
D CMASS_02585 sdaC3; Serine transporter K03837 sdaC; serine transporter
D CMASS_06120 sdaC4; Serine transporter K03837 sdaC; serine transporter
D CMASS_06130 sdaC5; Serine transporter K03837 sdaC; serine transporter
D CMASS_00900 mntH; Divalent metal cation transporter MntH K03322 mntH; manganese transport protein
D CMASS_09160 Sodium Bile acid symporter family protein K03325 ACR3; arsenite transporter
D CMASS_06755 mrpF; Na(+)/H(+) antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D CMASS_06775 mrpA1; Na(+)/H(+) antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D CMASS_09215 mrpA2; Na(+)/H(+) antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D CMASS_06770 mrpC1; Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D CMASS_09220 mrpC2; Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D CMASS_06765 mrpD1; Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D CMASS_09225 mrpD2; Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D CMASS_09230 putative monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D CMASS_09235 putative monovalent cation/H+ antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D CMASS_06750 putative monovalent cation/H+ antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D CMASS_09240 mrpG; Na(+)/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D CMASS_10215 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CMASS_00705 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D CMASS_07610 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D CMASS_07060 ftsW2; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D CMASS_03655 efeU; Ferrous iron permease EfeU K07243 FTR; high-affinity iron transporter
D CMASS_03650 efeO; Iron uptake system component EfeO precursor K07224 efeO; iron uptake system component EfeO
D CMASS_03645 efeN1; putative deferrochelatase/peroxidase EfeN precursor K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D CMASS_01385 Cytochrome C biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D CMASS_02130 macA; Macrolide export protein MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system
D CMASS_09655 hypothetical protein K20468 K20468; putative heme transporter
D CMASS_02210 feoB; Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CMASS_05970 Copper resistance protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:cmas02044]
D CMASS_01005 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CMASS_01010 hypothetical protein K12510 tadB; tight adherence protein B
D CMASS_07020 YGGT family protein K02221 yggT; YggT family protein
D CMASS_07835 comEA; ComE operon protein 1 K02237 comEA; competence protein ComEA
D CMASS_01880 Subtilisin BL K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D CMASS_01985 WXG domain conatining protein K14956 esx; ESAT-6 family protein
D CMASS_02705 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CMASS_05185 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CMASS_05890 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CMASS_01520 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CMASS_05885 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CMASS_05610 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CMASS_01820 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CMASS_06745 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CMASS_06780 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CMASS_05895 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CMASS_09885 yidC1; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CMASS_10260 yidC2; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CMASS_05325 tatAd; Sec-independent protein translocase protein TatAd K03116 tatA; sec-independent protein translocase protein TatA
D CMASS_04125 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D CMASS_05320 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:cmas02042]
D CMASS_07670 corC; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CMASS_07675 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CMASS_08690 hemeolysin-III related K11068 hlyIII; hemolysin III
D CMASS_00355 plcN; Non-hemolytic phospholipase C precursor K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:cmas02022]
D CMASS_01230 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D CMASS_01235 regX3; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D CMASS_02685 mtrB; Sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D CMASS_02670 mtrA1; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D CMASS_08750 tcrY; putative sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CMASS_08755 tcrX; putative transcriptional regulatory protein TcrX K02483 K02483; two-component system, OmpR family, response regulator
D CMASS_02860 desK1; Sensor histidine kinase DesK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D CMASS_02855 vraR; Response regulator protein VraR K07693 desR; two-component system, NarL family, response regulator DesR
C 02035 Bacterial motility proteins [BR:cmas02035]
D CMASS_01005 Putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cmas04812]
D CMASS_07040 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CMASS_05090 soj1; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CMASS_10250 soj2; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CMASS_10245 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cmas04147]
D CMASS_03675 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CMASS_03570 gap1; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CMASS_05625 gap2; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CMASS_05620 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CMASS_06850 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CMASS_00215 ppiA; Peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CMASS_02075 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CMASS_09200 groL2; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CMASS_09465 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CMASS_03210 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CMASS_02100 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CMASS_02105 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CMASS_01635 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D CMASS_10175 Sodium Bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CMASS_01215 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CMASS_07690 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CMASS_01825 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CMASS_05875 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CMASS_05005 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CMASS_05000 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CMASS_02465 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CMASS_07345 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CMASS_04490 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CMASS_09785 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CMASS_02515 glnA1; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CMASS_07285 glnA2; Glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CMASS_07325 glnA3; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CMASS_01315 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CMASS_08990 phoA; Alkaline phosphatase H precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CMASS_04665 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CMASS_03240 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CMASS_01145 lpd; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CMASS_04520 etfA; Electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D CMASS_05595 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CMASS_05615 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CMASS_01225 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:cmas02048]
D CMASS_07805 dpnM; Modification methylase DpnIIA K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CMASS_05140 putative methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CMASS_04290 mazF; mRNA interferase MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D CMASS_07040 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CMASS_00720 gltX1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CMASS_04690 gltX2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CMASS_04525 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:cmas01504]
D CMASS_00860 norB; Quinolone resistance protein NorB K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
D CMASS_00105 carB; rRNA methyltransferase K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D CMASS_08765 qacA; Antiseptic resistance protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cmas00537]
D CMASS_08990 phoA; Alkaline phosphatase H precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CMASS_01080 S-(hydroxymethyl)mycothiol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306]
D CMASS_00515 putative oxidoreductase K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333]
D CMASS_04625 gpr; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D CMASS_00520 dprE1; putative decaprenylphosphoryl-beta-D-ribose oxidase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D CMASS_01490 Putative oxidoreductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D CMASS_02335 lpdA; NAD(P)H dehydrogenase (quinone) K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CMASS_05575 qorA; Quinone oxidoreductase 1 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CMASS_06555 mtr; Mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D CMASS_09845 msrA; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CMASS_06025 msrB; Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CMASS_04630 yqjG; Glutathionyl-hydroquinone reductase YqjG K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D CMASS_05960 efeN2; putative deferrochelatase/peroxidase EfeN precursor K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19]
D CMASS_08300 bcp; Putative peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CMASS_05840 tpx; putative thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CMASS_06195 ahpD; Alkyl hydroperoxide reductase AhpD K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D CMASS_06200 Alkyl hydroperoxide reductase subunit C K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D CMASS_05260 yfeX; putative deferrochelatase/peroxidase YfeX K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D CMASS_00390 ftnA; Ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D CMASS_09325 fprA; NADPH-ferredoxin reductase FprA K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CMASS_03175 mrx1; Mycoredoxin 1 K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D CMASS_06930 pflA; Pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CMASS_02005 cfa; Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CMASS_05255 cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CMASS_08625 mshD2; Mycothiol acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D CMASS_05285 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D CMASS_03395 yncA; N-acyltransferase YncA K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D CMASS_03105 Glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D CMASS_01220 mshA; D-inositol 3-phosphate glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D CMASS_04765 DAK2 domain protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D CMASS_07320 glnE; Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D CMASS_06540 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D CMASS_04150 pnbA; Para-nitrobenzyl esterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D CMASS_08105 acyl-CoA thioesterase YbgC K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CMASS_07845 gpgP; Glucosyl-3-phosphoglycerate phosphatase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D CMASS_03400 ycfH; putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CMASS_04470 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-]
D CMASS_09265 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CMASS_04010 mshB; 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D CMASS_00160 pdaC; Peptidoglycan-N-acetylmuramic acid deacetylase PdaC K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CMASS_03735 mca; Mycothiol S-conjugate amidase K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D CMASS_09435 2-oxoglutaramate amidase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D CMASS_06670 yxeP3; putative hydrolase YxeP K23726 agaA; Nalpha-acyl-L-glutamine aminoacylase [EC:3.5.1.133]
D CMASS_10020 nnr; Bifunctional NAD(P)H-hydrate repair enzyme Nnr K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CMASS_03120 davT; 5-aminovalerate aminotransferase DavT K20708 E5.1.1.21; isoleucine 2-epimerase [EC:5.1.1.21]
D CMASS_05400 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D CMASS_06705 capB; Capsule biosynthesis protein CapB K01932 capB; gamma-polyglutamate synthase [EC:6.3.2.-]
D CMASS_09670 accD3; putative propionyl-CoA carboxylase beta chain 5 K27093 accD4; long chain acyl-CoA carboxylase carboxyl transferase subunit beta 4 [EC:6.4.1.- 2.1.3.-]
D CMASS_07510 copB; Copper-exporting P-type ATPase B K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D CMASS_03860 zosA; Zinc-transporting ATPase K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D CMASS_04330 lutA; Lactate utilization protein A K18928 lldE; L-lactate dehydrogenase complex protein LldE
D CMASS_04325 lutB; Lactate utilization protein B K18929 lldF; L-lactate dehydrogenase complex protein LldF
D CMASS_04320 lutC; Lactate utilization protein C K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D CMASS_01780 formate dehydrogenase accessory protein K02379 fdhD; FdhD protein
D CMASS_05525 nifU; NifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D CMASS_04515 etfB; Electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
D CMASS_01930 Putative NrdI-like protein K03647 nrdI; protein involved in ribonucleotide reduction
D CMASS_08440 ribonucleotide reductase stimulatory protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D CMASS_07030 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CMASS_03090 rpfA1; Resuscitation-promoting factor RpfA precursor K21687 rpfA; resuscitation-promoting factor RpfA
D CMASS_03425 rpf2; Resuscitation-promoting factor Rpf2 precursor K21688 rpfB; resuscitation-promoting factor RpfB
C 99987 Cofactor metabolism
D CMASS_02950 abgT1; p-aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein
D CMASS_02975 abgT2; p-aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D CMASS_08830 Alpha/beta hydrolase family protein K03932 lpqC; polyhydroxybutyrate depolymerase
D CMASS_01950 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D CMASS_01435 catD; Putative oxidoreductase CatD K15977 K15977; putative oxidoreductase
D CMASS_03360 mhqP; Putative oxidoreductase MhqP K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CMASS_01040 cspA; putative cold shock protein A K03704 cspA; cold shock protein
D CMASS_03095 csp; Cold shock-like protein K03704 cspA; cold shock protein
D CMASS_06715 hypothetical protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D CMASS_08400 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CMASS_07975 tig; Trigger factor K03545 tig; trigger factor
D CMASS_02965 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D CMASS_08445 nrdH; Glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D CMASS_06630 comM; Competence protein ComM K07391 comM; magnesium chelatase family protein
D CMASS_01390 ccs1; Cytochrome c biogenesis protein Ccs1 K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D CMASS_03845 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D CMASS_06635 hypothetical protein K07460 yraN; putative endonuclease
D CMASS_05370 PD-(D/E)XK nuclease superfamily protein K07465 K07465; putative RecB family exonuclease
D CMASS_06625 hypothetical protein K04096 smf; DNA processing protein
D CMASS_05800 rarA; Replication-associated recombination protein A K07478 ycaJ; putative ATPase
D CMASS_07465 Integrase core domain protein K18320 IS15; transposase, IS6 family
D CMASS_07515 Integrase core domain protein K18320 IS15; transposase, IS6 family
D CMASS_04820 hypothetical protein K07483 K07483; transposase
D CMASS_00140 Transposase, Mutator family K07493 K07493; putative transposase
D CMASS_00635 Transposase, Mutator family K07493 K07493; putative transposase
D CMASS_00905 Transposase, Mutator family K07493 K07493; putative transposase
D CMASS_01740 Transposase, Mutator family K07493 K07493; putative transposase
D CMASS_03875 Transposase, Mutator family K07493 K07493; putative transposase
D CMASS_05160 Transposase, Mutator family K07493 K07493; putative transposase
D CMASS_08230 Transposase, Mutator family K07493 K07493; putative transposase
D CMASS_08560 Transposase, Mutator family K07493 K07493; putative transposase
D CMASS_09015 Transposase, Mutator family K07493 K07493; putative transposase
D CMASS_00095 Integrase core domain protein K07497 K07497; putative transposase
D CMASS_00745 Integrase core domain protein K07497 K07497; putative transposase
D CMASS_01280 Integrase core domain protein K07497 K07497; putative transposase
D CMASS_08005 Integrase core domain protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D CMASS_06350 PspA/IM30 family protein K03969 pspA; phage shock protein A
D CMASS_00790 Nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CMASS_04190 proY; Proline-specific permease ProY K03293 TC.AAT; amino acid transporter, AAT family
D CMASS_02750 citN1; Citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D CMASS_07955 dtpT; Di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CMASS_08780 pitA; Low-affinity inorganic phosphate transporter 1 K03306 TC.PIT; inorganic phosphate transporter, PiT family
D CMASS_02450 sglT; Sodium/glucose cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D CMASS_06795 alsT1; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CMASS_08480 alsT2; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CMASS_07725 brnQ1; Branched-chain amino acid transport system 2 carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D CMASS_07730 brnQ2; Branched-chain amino acid transport system 2 carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D CMASS_04000 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D CMASS_05495 hypothetical protein K07166 K07166; ACT domain-containing protein
D CMASS_07645 ybeZ2; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D CMASS_03785 ybeZ1; PhoH-like protein K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D CMASS_04530 acm; Lysozyme M1 precursor K07273 acm; lysozyme
C 99994 Others
D CMASS_08600 hypothetical protein K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CMASS_01035 putative ATP-dependent helicase Lhr K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D CMASS_08090 glbO; Group 2 truncated hemoglobin GlbO K06886 glbN; hemoglobin
D CMASS_00695 ydfJ1; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily
D CMASS_03525 ydfJ2; Membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily
D CMASS_05545 sufB; FeS cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D CMASS_05540 sufD; FeS cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D CMASS_02285 yhjD; Inner membrane protein YhjD K07058 K07058; membrane protein
D CMASS_03515 hypothetical protein K07058 K07058; membrane protein
D CMASS_10025 putative rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D CMASS_04715 yqjA; Inner membrane protein YqjA K03975 dedA; membrane-associated protein
D CMASS_09115 smc3; Chromosome partition protein Smc K01421 yhgE; putative membrane protein
D CMASS_09120 ABC-2 family transporter protein K01421 yhgE; putative membrane protein
D CMASS_01585 yidH; Inner membrane protein YidH K00389 yidH; putative membrane protein
D CMASS_00610 Membrane protein of unknown function K08972 K08972; putative membrane protein
D CMASS_02205 Bacterial membrane flanked domain protein K08981 K08981; putative membrane protein
D CMASS_05175 hypothetical protein K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D CMASS_09645 hypothetical protein K06860 K06860; putative heme uptake system protein
D CMASS_04785 Sulfite exporter TauE/SafE K06867 K06867; uncharacterized protein
D CMASS_07685 hypothetical protein K06867 K06867; uncharacterized protein
D CMASS_08540 hypothetical protein K06975 K06975; uncharacterized protein
D CMASS_08720 hypothetical protein K06986 K06986; uncharacterized protein
D CMASS_00470 27 kDa antigen Cfp30B K06996 K06996; uncharacterized protein
D CMASS_08715 Endonuclease/Exonuclease/phosphatase family protein K07004 K07004; uncharacterized protein
D CMASS_02510 Amidohydrolase K07045 K07045; uncharacterized protein
D CMASS_05815 Putative neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D CMASS_05720 Epimerase family protein K07071 K07071; uncharacterized protein
D CMASS_10155 KsdD-like steroid dehydrogenase K07077 K07077; uncharacterized protein
D CMASS_02640 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D CMASS_08985 hypothetical protein K07093 K07093; uncharacterized protein
D CMASS_00920 phosphodiesterase YaeI K07098 K07098; uncharacterized protein
D CMASS_07770 putative inner membrane protein K07112 K07112; uncharacterized protein
D CMASS_00415 Putative ammonia monooxygenase K07120 K07120; uncharacterized protein
D CMASS_00420 hypothetical protein K07120 K07120; uncharacterized protein
D CMASS_08150 isfD; Sulfoacetaldehyde reductase K07124 K07124; uncharacterized protein
D CMASS_01580 hypothetical protein K07133 K07133; uncharacterized protein
D CMASS_10120 hypothetical protein K07133 K07133; uncharacterized protein
D CMASS_07365 smc2; Chromosome partition protein Smc K07164 K07164; uncharacterized protein
D CMASS_10265 yidD; Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D CMASS_03685 hypothetical protein K09009 K09009; uncharacterized protein
D CMASS_00925 Yqey-like protein K09117 K09117; uncharacterized protein
D CMASS_02845 hypothetical protein K09118 K09118; uncharacterized protein
D CMASS_03990 hypothetical protein K09146 K09146; uncharacterized protein
D CMASS_05500 hypothetical protein K09157 K09157; uncharacterized protein
D CMASS_02200 Bacterial membrane flanked domain protein K09167 K09167; uncharacterized protein
D CMASS_03985 yedI; Inner membrane protein YedI K09781 K09781; uncharacterized protein
D CMASS_05010 hypothetical protein K09791 K09791; uncharacterized protein
D CMASS_06510 hypothetical protein K09861 K09861; uncharacterized protein
D CMASS_06470 hypothetical protein K07742 ylxR; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 5, 2024