+D GENES KO #

  KEGG Orthology (KO) - Caldinitratiruptor microaerophilus

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:cmic00010] D caldi_02450 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D caldi_27610 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D caldi_21160 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D caldi_28780 fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D caldi_00230 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D caldi_26720 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D caldi_26740 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D caldi_16170 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D caldi_20150 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D caldi_20780 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D caldi_26730 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D caldi_26700 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D caldi_26690 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D caldi_21150 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D caldi_24600 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D caldi_20760 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D caldi_33710 bkdA_2; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D caldi_01360 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D caldi_06460 bkdA_1; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D caldi_33720 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D caldi_01370 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D caldi_06470 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D caldi_33730 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D caldi_01380 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D caldi_02060 acoC_1; dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D caldi_06480 bkdF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D caldi_33740 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_01390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_06490 pdhD; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_20140 bfmbC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_12410 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D caldi_12400 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D caldi_12420 pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D caldi_01160 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D caldi_01330 porA_1; pyruvate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D caldi_01450 porA_2; pyruvate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D caldi_01190 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D caldi_01340 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D caldi_01460 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D caldi_34000 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D caldi_31760 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D caldi_34040 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D caldi_07460 acyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D caldi_11840 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:cmic00020] D caldi_02580 gltA; type I citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D caldi_07380 acoA; aconitate hydratase A K01681 ACO; aconitate hydratase [EC:4.2.1.3] D caldi_02560 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D caldi_33740 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_01390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_06490 pdhD; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_20140 bfmbC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_01160 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D caldi_01330 porA_1; pyruvate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D caldi_01450 porA_2; pyruvate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D caldi_01190 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D caldi_01340 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D caldi_01460 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D caldi_01170 2-oxoglutarate ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D caldi_02950 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D caldi_02940 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D caldi_17820 acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D caldi_25150 fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D caldi_31640 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D caldi_25160 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D caldi_31650 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D caldi_31630 sdhC; succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D caldi_25140 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D caldi_02910 fumB; fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D caldi_02920 fumX; fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D caldi_02630 aspA; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D caldi_02570 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D caldi_29060 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D caldi_33710 bkdA_2; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D caldi_01360 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D caldi_06460 bkdA_1; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D caldi_33720 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D caldi_01370 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D caldi_06470 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D caldi_33730 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D caldi_01380 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D caldi_02060 acoC_1; dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D caldi_06480 bkdF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D caldi_12410 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D caldi_12400 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D caldi_12420 pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:cmic00030] D caldi_27610 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D caldi_12610 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D caldi_02280 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D caldi_12600 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D caldi_17400 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D caldi_27920 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D caldi_27930 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D caldi_28790 tal; putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D caldi_28680 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D caldi_08020 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D caldi_34450 rbsK_2; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D caldi_11910 rbsK_1; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D caldi_10430 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D caldi_11840 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D caldi_31000 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D caldi_18050 aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D caldi_18060 sugar kinase K11441 kguK; dehydrogluconokinase [EC:2.7.1.13] D caldi_02270 gluconate kinase K25031 gntK; gluconokinase [EC:2.7.1.12] D caldi_01580 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D caldi_02760 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D caldi_07370 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D caldi_17670 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D caldi_21710 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D caldi_00230 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D caldi_28780 fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D caldi_21160 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:cmic00040] D caldi_24260 hypothetical protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25] D caldi_06750 hypothetical protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25] D caldi_09310 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D caldi_12630 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D caldi_12800 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D caldi_12740 altronate hydrolase K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7] D caldi_12750 carbohydrate hydrolase K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7] D caldi_35290 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D caldi_17330 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D caldi_17400 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D caldi_15060 L-rhamnose isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-] D caldi_15040 carbohydrate kinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D caldi_12670 hpaG; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase K14259 kdaD; 2-dehydro-3-deoxy-D-arabinonate dehydratase [EC:4.2.1.141] D caldi_30530 aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-] C 00051 Fructose and mannose metabolism [PATH:cmic00051] D caldi_11840 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D caldi_14540 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D caldi_13000 fabG_3; 3-oxoacyl-ACP reductase K21883 lra5; 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) [EC:1.1.1.401] D caldi_15060 L-rhamnose isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-] D caldi_15040 carbohydrate kinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D caldi_21160 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D caldi_28780 fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D caldi_05740 tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D caldi_00230 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D caldi_26720 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D caldi_28680 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D caldi_05750 PTS fructose transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D caldi_07640 PTS sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component C 00052 Galactose metabolism [PATH:cmic00052] D caldi_35300 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D caldi_12380 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D caldi_35290 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D caldi_11840 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D caldi_02450 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D caldi_21160 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D caldi_31450 tagatose-bisphosphate aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40] D caldi_02220 dgoA; galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] C 00053 Ascorbate and aldarate metabolism [PATH:cmic00053] D caldi_06940 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D caldi_06950 ulaA; PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D caldi_17330 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D caldi_33650 hpcH; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20] D caldi_12670 hpaG; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase K14259 kdaD; 2-dehydro-3-deoxy-D-arabinonate dehydratase [EC:4.2.1.141] C 00500 Starch and sucrose metabolism [PATH:cmic00500] D caldi_35290 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D caldi_33680 glycoside hydrolase family protein K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D caldi_20030 alpha-1,4 glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D caldi_18650 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D caldi_11840 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D caldi_02450 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D caldi_27610 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cmic00520] D caldi_07720 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D caldi_27400 glmS; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D caldi_27520 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D caldi_30990 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D caldi_18450 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D caldi_24290 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D caldi_18460 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D caldi_28620 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D caldi_14640 UDP-N-acetyl-D-glucosamine dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D caldi_28220 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D caldi_28170 N-acylneuraminate-9-phosphate synthase K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101] D caldi_02450 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D caldi_11840 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D caldi_35290 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D caldi_35300 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D caldi_12380 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D caldi_07640 PTS sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D caldi_27610 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D caldi_14540 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] C 00620 Pyruvate metabolism [PATH:cmic00620] D caldi_31760 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D caldi_34040 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D caldi_07460 acyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D caldi_12410 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D caldi_12400 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D caldi_12420 pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D caldi_01160 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D caldi_01330 porA_1; pyruvate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D caldi_01450 porA_2; pyruvate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D caldi_01190 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D caldi_01340 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D caldi_01460 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D caldi_33710 bkdA_2; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D caldi_01360 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D caldi_06460 bkdA_1; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D caldi_33720 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D caldi_01370 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D caldi_06470 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D caldi_33730 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D caldi_01380 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D caldi_02060 acoC_1; dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D caldi_06480 bkdF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D caldi_33740 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_01390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_06490 pdhD; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_20140 bfmbC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_19750 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D caldi_21150 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D caldi_09150 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D caldi_18630 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D caldi_17820 acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D caldi_34000 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D caldi_03690 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D caldi_17690 malate oxidoreductase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D caldi_29060 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D caldi_02570 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D caldi_02910 fumB; fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D caldi_02920 fumX; fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D caldi_02630 aspA; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D caldi_24600 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D caldi_20760 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D caldi_16270 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D caldi_00800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_06620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_08900 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_09220 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_11150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_14480 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_24270 mmgA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_27690 citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D caldi_00180 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cmic00630] D caldi_16260 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D caldi_31760 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D caldi_34040 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D caldi_07460 acyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D caldi_16270 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D caldi_02570 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D caldi_02580 gltA; type I citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D caldi_07380 acoA; aconitate hydratase A K01681 ACO; aconitate hydratase [EC:4.2.1.3] D caldi_00800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_06620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_08900 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_09220 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_11150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_14480 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_24270 mmgA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_18690 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D caldi_03330 methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D caldi_18700 methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D caldi_03320 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D caldi_18710 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D caldi_31420 glcD; FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D caldi_33550 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D caldi_20390 glcD-1; FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D caldi_31410 glcF_1; glycolate oxidase iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D caldi_33530 glcF_2; putative glycolate oxidase iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D caldi_20380 glcF-2; glycolate oxidase iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D caldi_32780 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D caldi_01850 cbbL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D caldi_31620 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D caldi_26790 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D caldi_10990 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D caldi_12530 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D caldi_13260 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D caldi_13290 gcvPA; putative glycine dehydrogenase (decarboxylating) subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D caldi_13280 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D caldi_13310 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D caldi_33740 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_01390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_06490 pdhD; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_20140 bfmbC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_13300 gcvH_2; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D caldi_30550 gcl; tartronate-semialdehyde synthase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47] D caldi_30560 hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D caldi_30570 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D caldi_02550 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D caldi_06450 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D caldi_18050 aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D caldi_15700 formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D caldi_22650 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D caldi_22640 fdxH; formate dehydrogenase iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D caldi_16060 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D caldi_12620 cyclase K07130 kynB; arylformamidase [EC:3.5.1.9] D caldi_16330 acetamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] C 00640 Propanoate metabolism [PATH:cmic00640] D caldi_31760 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D caldi_34040 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D caldi_07460 acyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D caldi_19750 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D caldi_20130 2-oxoisovalerate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D caldi_20120 bfmbAb; 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D caldi_20110 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D caldi_33740 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_01390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_06490 pdhD; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_20140 bfmbC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_12410 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D caldi_12400 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D caldi_12420 pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D caldi_03350 butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D caldi_09150 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D caldi_18630 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D caldi_11950 gabT_1; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D caldi_12230 gabT_2; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D caldi_24410 gabT_3; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D caldi_18690 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D caldi_03330 methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D caldi_18700 methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D caldi_03320 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D caldi_18710 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D caldi_02940 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D caldi_02950 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D caldi_34000 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D caldi_16160 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:cmic00650] D caldi_00800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_06620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_08900 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_09220 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_11150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_14480 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_24270 mmgA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_19740 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D caldi_21490 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D caldi_24250 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D caldi_00330 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D caldi_03350 butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D caldi_10360 ptb; phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19] D caldi_18670 hypothetical protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D caldi_26930 hypothetical protein K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D caldi_26940 gctB; 3-oxoadipate--succinyl-CoA transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D caldi_06450 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D caldi_25150 fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D caldi_31640 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D caldi_25160 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D caldi_31650 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D caldi_31630 sdhC; succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D caldi_25140 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D caldi_11950 gabT_1; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D caldi_12230 gabT_2; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D caldi_24410 gabT_3; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D caldi_17820 acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D caldi_15750 4-hydroxybutyryl-CoA dehydratase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3] D caldi_12410 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D caldi_12400 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D caldi_12420 pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D caldi_01160 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D caldi_01330 porA_1; pyruvate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D caldi_01450 porA_2; pyruvate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D caldi_01190 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D caldi_01340 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D caldi_01460 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D caldi_05570 yngG; hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D caldi_09200 hypothetical protein K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D caldi_09210 hypothetical protein K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D caldi_15970 D-arabinose dehydrogenase K18382 adh1; NAD+-dependent secondary alcohol dehydrogenase Adh1 [EC:1.1.1.-] D caldi_08950 alcohol dehydrogenase K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-] D caldi_00220 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D caldi_12920 thiamine pyrophosphate protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D caldi_00160 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:cmic00660] D caldi_00220 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D caldi_12920 thiamine pyrophosphate protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D caldi_00160 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D caldi_02940 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D caldi_02950 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D caldi_00190 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D caldi_00200 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D caldi_17730 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:cmic00562] D caldi_16800 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D caldi_26720 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:cmic00190] D caldi_05380 nuoA_1; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D caldi_23220 nuoA_2; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D caldi_05390 nuoB1; NADH-quinone oxidoreductase subunit B 1 K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D caldi_23230 hypothetical protein K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D caldi_05410 nuoD2; NADH-quinone oxidoreductase subunit D 2 K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D caldi_23200 nuoD; NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D caldi_05420 hypothetical protein K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D caldi_03250 nuoF; NADH dehydrogenase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D caldi_05430 nuoF1; NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D caldi_05450 nuoH2; NADH-quinone oxidoreductase subunit H 2 K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D caldi_23190 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D caldi_05460 nuoI; NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D caldi_05470 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D caldi_05480 nuoK; NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D caldi_23170 ndhE; NAD(P)H-quinone oxidoreductase subunit 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D caldi_05490 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D caldi_23160 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D caldi_23150 nuoM-1; NADH:ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D caldi_23140 nuoN-1_2; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D caldi_25150 fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D caldi_31640 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D caldi_25160 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D caldi_31650 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D caldi_31630 sdhC; succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D caldi_25140 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D caldi_00400 ctaE; cytochrome B oxidoreductase K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D caldi_00390 ctaD; cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D caldi_00380 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D caldi_28550 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D caldi_28530 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D caldi_28540 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D caldi_28520 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D caldi_28570 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D caldi_28580 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D caldi_18020 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D caldi_31980 haloacid dehalogenase K06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:cmic00710] D caldi_01850 cbbL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D caldi_26730 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D caldi_26740 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D caldi_16170 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D caldi_20150 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D caldi_20780 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D caldi_00230 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D caldi_28780 fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D caldi_27920 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D caldi_27930 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D caldi_28680 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D caldi_26720 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D caldi_17400 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D caldi_28790 tal; putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D caldi_24600 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D caldi_02570 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:cmic00720] D caldi_12410 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D caldi_12400 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D caldi_12420 pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D caldi_20760 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D caldi_24600 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D caldi_29060 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D caldi_02570 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D caldi_02910 fumB; fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D caldi_02920 fumX; fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D caldi_02630 aspA; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D caldi_25150 fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D caldi_31640 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D caldi_25160 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D caldi_31650 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D caldi_31630 sdhC; succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D caldi_25140 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D caldi_02950 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D caldi_02940 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D caldi_15750 4-hydroxybutyryl-CoA dehydratase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3] D caldi_00800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_06620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_08900 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_09220 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_11150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_14480 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_24270 mmgA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_01160 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D caldi_01330 porA_1; pyruvate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D caldi_01450 porA_2; pyruvate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D caldi_01190 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D caldi_01340 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D caldi_01460 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D caldi_01170 2-oxoglutarate ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D caldi_02560 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D caldi_07380 acoA; aconitate hydratase A K01681 ACO; aconitate hydratase [EC:4.2.1.3] D caldi_09150 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D caldi_18630 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D caldi_21510 crotonase K15019 K15019; 3-hydroxypropionyl-coenzyme A dehydratase [EC:4.2.1.116] D caldi_18690 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D caldi_03320 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D caldi_18710 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D caldi_03330 methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D caldi_18700 methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D caldi_03270 hypothetical protein K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10] D caldi_31490 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D caldi_09730 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D caldi_19750 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D caldi_31760 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D caldi_34040 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D caldi_07460 acyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:cmic00680] D caldi_15700 formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D caldi_22650 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D caldi_22640 fdxH; formate dehydrogenase iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D caldi_16060 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D caldi_03270 hypothetical protein K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10] D caldi_13260 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D caldi_31620 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D caldi_26690 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D caldi_02570 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D caldi_00230 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D caldi_28780 fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D caldi_21160 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D caldi_15550 formylmethanofuran dehydrogenase subunit A K00200 fwdA; formylmethanofuran dehydrogenase subunit A [EC:1.2.7.12] D caldi_15420 formylmethanofuran dehydrogenase subunit B K00201 fwdB; formylmethanofuran dehydrogenase subunit B [EC:1.2.7.12] D caldi_15530 hypothetical protein K00202 fwdC; formylmethanofuran dehydrogenase subunit C [EC:1.2.7.12] D caldi_15540 formylmethanofuran--tetrahydromethanopterin formyltransferase K00672 ftr; formylmethanofuran--tetrahydromethanopterin N-formyltransferase [EC:2.3.1.101] D caldi_15520 mch; methenyltetrahydromethanopterin cyclohydrolase K01499 mch; methenyltetrahydromethanopterin cyclohydrolase [EC:3.5.4.27] D caldi_15590 mtdA; MtdA bifunctional protein K00300 mtdA; methylenetetrahydrofolate/methylenetetrahydromethanopterin dehydrogenase (NADP+) [EC:1.5.1.5 1.5.1.-] D caldi_19750 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D caldi_31760 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D caldi_34040 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D caldi_07460 acyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D caldi_12410 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D caldi_12400 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D caldi_12420 pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D caldi_20760 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D caldi_26700 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D caldi_29730 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D caldi_01410 phosphosulfolactate synthase K08097 comA; phosphosulfolactate synthase [EC:4.4.1.19] D caldi_15500 hypothetical protein K09733 mfnB; (5-formylfuran-3-yl)methyl phosphate synthase [EC:4.2.3.153] C 00910 Nitrogen metabolism [PATH:cmic00910] D caldi_16330 acetamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] D caldi_30880 hypothetical protein K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D caldi_30890 nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D caldi_11590 nitrite reductase, copper-containing K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1] D caldi_26640 nitric oxide reductase K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5] D caldi_32890 hypothetical protein K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4] D caldi_03820 nitrogenase subunit nifH K02588 nifH; nitrogenase iron protein NifH D caldi_32290 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D caldi_18860 gluD; glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D caldi_25730 gudB; cryptic catabolic NAD-specific glutamate dehydrogenase GudB K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D caldi_26790 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D caldi_10990 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D caldi_12530 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D caldi_09830 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D caldi_18730 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D caldi_18750 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D caldi_22880 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:cmic00920] D caldi_19130 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein D caldi_19120 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D caldi_19110 ssuB; sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D caldi_22500 nitrate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D caldi_11560 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D caldi_04950 phosphoesterase RecJ-like protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D caldi_11570 yitB; putative phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D caldi_33750 pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D caldi_31290 hypothetical protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2] D caldi_32110 hypothetical protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2] D caldi_16080 formate dehydrogenase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D caldi_16110 hypothetical protein K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D caldi_32190 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D caldi_03210 cysK_1; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D caldi_03400 cysK_2; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D caldi_19040 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D caldi_22470 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D caldi_11880 hypothetical protein K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D caldi_03410 metC; cystathionine gamma-synthase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2] D caldi_16440 molybdopterin oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D caldi_16450 4Fe-4S ferredoxin K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit D caldi_16460 oxidoreductase K00185 dmsC; dimethyl sulfoxide reductase membrane subunit B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:cmic00061] D caldi_09150 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D caldi_18630 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D caldi_17010 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D caldi_17030 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D caldi_17050 3-oxoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D caldi_17000 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D caldi_00790 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_06650 fabG_1; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_07610 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_12010 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_12220 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_13030 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_17020 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_20410 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_28400 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D caldi_35410 enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D caldi_25280 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D caldi_00830 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D caldi_18170 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:cmic00071] D caldi_00800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_06620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_08900 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_09220 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_11150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_14480 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_24270 mmgA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_00340 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D caldi_00330 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D caldi_03350 butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D caldi_00700 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D caldi_25280 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D caldi_00830 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D caldi_18170 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:cmic00561] D caldi_02550 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D caldi_17060 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D caldi_14910 plsY2; glycerol-3-phosphate acyltransferase 2 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] C 00564 Glycerophospholipid metabolism [PATH:cmic00564] D caldi_14900 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D caldi_14910 plsY2; glycerol-3-phosphate acyltransferase 2 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D caldi_11510 psd; phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D caldi_02140 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:cmic00592] D caldi_00340 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:cmic00230] D caldi_10380 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D caldi_10430 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D caldi_11840 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D caldi_31000 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D caldi_23720 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D caldi_23660 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D caldi_23700 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D caldi_23730 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D caldi_23750 hypothetical protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D caldi_23740 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D caldi_23710 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D caldi_23790 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D caldi_23760 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D caldi_23780 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D caldi_23670 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D caldi_18330 laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D caldi_20060 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D caldi_23830 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D caldi_24300 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D caldi_11730 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D caldi_23850 yjjX; NTPase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D caldi_23820 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D caldi_17520 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D caldi_03670 (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D caldi_29320 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D caldi_26960 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D caldi_10770 2',3'-cyclic-nucleotide 2'-phosphodiesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D caldi_33310 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D caldi_31080 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D caldi_11560 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D caldi_18730 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D caldi_18750 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D caldi_22880 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:cmic00240] D caldi_23930 carbamoyl-phosphate synthase (glutamine-hydrolyzing) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D caldi_23940 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D caldi_17800 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D caldi_17790 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D caldi_17770 pyrD; dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D caldi_17760 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D caldi_18120 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D caldi_04690 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D caldi_11730 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D caldi_31080 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D caldi_26010 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D caldi_28880 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D caldi_15280 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D caldi_28660 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D caldi_17810 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D caldi_10770 2',3'-cyclic-nucleotide 2'-phosphodiesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D caldi_02010 pdp; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D caldi_24930 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D caldi_28650 hypothetical protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D caldi_05010 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:cmic00250] D caldi_01690 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D caldi_20570 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D caldi_06530 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D caldi_31620 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D caldi_10410 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D caldi_23970 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D caldi_23950 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D caldi_29320 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D caldi_23780 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D caldi_17800 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D caldi_11950 gabT_1; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D caldi_12230 gabT_2; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D caldi_24410 gabT_3; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D caldi_09830 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D caldi_18860 gluD; glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D caldi_25730 gudB; cryptic catabolic NAD-specific glutamate dehydrogenase GudB K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D caldi_20210 rocA; 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D caldi_26790 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D caldi_10990 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D caldi_12530 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D caldi_23930 carbamoyl-phosphate synthase (glutamine-hydrolyzing) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D caldi_23940 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D caldi_23740 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D caldi_27400 glmS; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D caldi_23720 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:cmic00260] D caldi_05160 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D caldi_11870 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D caldi_05150 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D caldi_22950 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D caldi_19300 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D caldi_19310 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D caldi_19850 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D caldi_04240 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D caldi_13260 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D caldi_31620 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D caldi_02550 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D caldi_26700 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D caldi_29730 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D caldi_13290 gcvPA; putative glycine dehydrogenase (decarboxylating) subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D caldi_13280 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D caldi_13310 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D caldi_33740 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_01390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_06490 pdhD; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_20140 bfmbC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_13300 gcvH_2; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D caldi_03410 metC; cystathionine gamma-synthase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2] D caldi_30970 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D caldi_17220 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D caldi_17230 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:cmic00270] D caldi_32190 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D caldi_03210 cysK_1; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D caldi_03400 cysK_2; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D caldi_19040 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D caldi_22470 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D caldi_03410 metC; cystathionine gamma-synthase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2] D caldi_21200 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D caldi_21220 hypothetical protein K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54] D caldi_28390 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D caldi_11740 speH; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D caldi_28940 speE1; polyamine aminopropyltransferase 1 K00797 speE; spermidine synthase [EC:2.5.1.16] D caldi_18330 laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D caldi_11680 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D caldi_11710 putative 6-oxopurine nucleoside phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44] D caldi_06990 mtnA; methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D caldi_00460 diaminopimelate aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117] D caldi_11700 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D caldi_05160 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D caldi_11870 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D caldi_05150 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D caldi_22950 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D caldi_11880 hypothetical protein K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D caldi_32460 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D caldi_19920 hypothetical protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D caldi_33470 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D caldi_01690 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D caldi_20570 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D caldi_34000 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D caldi_02570 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D caldi_29730 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:cmic00280] D caldi_33470 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D caldi_10370 dhlE; leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D caldi_20130 2-oxoisovalerate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D caldi_20120 bfmbAb; 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D caldi_20110 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D caldi_33740 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_01390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_06490 pdhD; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_20140 bfmbC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_03350 butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D caldi_00700 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D caldi_09090 ivd; isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D caldi_00340 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D caldi_18690 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D caldi_03330 methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D caldi_18700 methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D caldi_03320 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D caldi_18710 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D caldi_00540 2-hydroxy-3-oxopropionate reductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D caldi_11950 gabT_1; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D caldi_12230 gabT_2; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D caldi_24410 gabT_3; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D caldi_05570 yngG; hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D caldi_09200 hypothetical protein K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D caldi_09210 hypothetical protein K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D caldi_00800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_06620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_08900 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_09220 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_11150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_14480 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_24270 mmgA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cmic00290] D caldi_30970 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D caldi_00190 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D caldi_00200 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D caldi_17730 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D caldi_00220 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D caldi_12920 thiamine pyrophosphate protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D caldi_00160 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D caldi_00170 ilvC; ketol-acid reductoisomerase (NADP(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D caldi_00210 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D caldi_33470 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D caldi_10370 dhlE; leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D caldi_27690 citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D caldi_00180 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:cmic00300] D caldi_22950 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D caldi_05160 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D caldi_11870 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D caldi_05150 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D caldi_05170 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D caldi_05120 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D caldi_23990 argD_2; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D caldi_03730 argE; peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D caldi_17560 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D caldi_17550 dapL; LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D caldi_24380 aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D caldi_10510 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D caldi_23920 meso-diaminopimelate D-dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16] D caldi_18510 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D caldi_18500 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:cmic00310] D caldi_33740 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_01390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_06490 pdhD; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_20140 bfmbC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_00800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_06620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_08900 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_09220 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_11150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_14480 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_24270 mmgA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_11830 argD_1; acetylornithine/acetyl-lysine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D caldi_11950 gabT_1; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D caldi_12230 gabT_2; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D caldi_24410 gabT_3; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D caldi_05800 CoA transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-] D caldi_23260 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00220 Arginine biosynthesis [PATH:cmic00220] D caldi_22870 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D caldi_23970 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D caldi_23950 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D caldi_23740 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D caldi_26790 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D caldi_10990 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D caldi_12530 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D caldi_23930 carbamoyl-phosphate synthase (glutamine-hydrolyzing) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D caldi_23940 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D caldi_18730 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D caldi_18750 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D caldi_22880 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D caldi_18860 gluD; glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D caldi_25730 gudB; cryptic catabolic NAD-specific glutamate dehydrogenase GudB K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D caldi_01690 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D caldi_20570 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D caldi_24020 acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D caldi_24010 argJ; arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D caldi_24000 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D caldi_24030 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D caldi_23990 argD_2; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:cmic00330] D caldi_06370 creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D caldi_06970 creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D caldi_06280 methylhydantoinase K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D caldi_06290 methylhydantoinase K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D caldi_29070 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D caldi_28930 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D caldi_00480 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D caldi_12330 speB_1; agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D caldi_28940 speE1; polyamine aminopropyltransferase 1 K00797 speE; spermidine synthase [EC:2.5.1.16] D caldi_11740 speH; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D caldi_11830 argD_1; acetylornithine/acetyl-lysine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D caldi_02900 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D caldi_09790 amiE; aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D caldi_19290 proC_1; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D caldi_20270 putA; proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2] D caldi_20210 rocA; 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D caldi_02600 hypothetical protein K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D caldi_02610 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D caldi_01690 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D caldi_20570 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D caldi_23260 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00340 Histidine metabolism [PATH:cmic00340] D caldi_23610 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D caldi_23620 hypothetical protein K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D caldi_23560 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D caldi_23570 imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D caldi_23590 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D caldi_23550 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D caldi_23600 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D caldi_31430 hutH2; histidine ammonia-lyase 2 K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D caldi_00510 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D caldi_00490 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] C 00350 Tyrosine metabolism [PATH:cmic00350] D caldi_01690 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D caldi_20570 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D caldi_23550 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D caldi_12870 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] C 00360 Phenylalanine metabolism [PATH:cmic00360] D caldi_25300 phenylacetate-coenzyme A ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D caldi_15810 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D caldi_33890 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D caldi_19740 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D caldi_21490 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D caldi_24250 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D caldi_01690 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D caldi_20570 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D caldi_23550 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D caldi_23260 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D caldi_02900 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D caldi_09790 amiE; aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D caldi_12820 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00380 Tryptophan metabolism [PATH:cmic00380] D caldi_12620 cyclase K07130 kynB; arylformamidase [EC:3.5.1.9] D caldi_33740 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_01390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_06490 pdhD; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_20140 bfmbC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_00800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_06620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_08900 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_09220 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_11150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_14480 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_24270 mmgA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_32290 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D caldi_02900 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D caldi_09790 amiE; aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cmic00400] D caldi_17210 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D caldi_13770 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D caldi_09570 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D caldi_13810 aroE; shikimate dehydrogenase (NADP(+)) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D caldi_13780 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D caldi_17190 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D caldi_13790 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D caldi_17280 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D caldi_17270 glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D caldi_17260 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D caldi_17240 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D caldi_17250 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D caldi_17220 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D caldi_17230 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D caldi_15290 aroH; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5] D caldi_17200 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D caldi_00150 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D caldi_01690 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D caldi_20570 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D caldi_23550 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:cmic00410] D caldi_11950 gabT_1; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D caldi_12230 gabT_2; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D caldi_24410 gabT_3; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D caldi_16040 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D caldi_03350 butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] C 00430 Taurine and hypotaurine metabolism [PATH:cmic00430] D caldi_27370 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D caldi_35190 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D caldi_12300 yhxA; putative aminotransferase YhxA K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77] D caldi_10410 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D caldi_18860 gluD; glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D caldi_19750 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:cmic00450] D caldi_21200 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D caldi_21220 hypothetical protein K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54] D caldi_25800 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D caldi_02380 trxB_1; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D caldi_11560 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D caldi_16400 selD_1; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D caldi_19800 selD_2; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D caldi_19810 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D caldi_30780 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:cmic00460] D caldi_32290 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D caldi_27370 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D caldi_35190 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D caldi_13260 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D caldi_16330 acetamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] C 00470 D-Amino acid metabolism [PATH:cmic00470] D caldi_34930 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D caldi_23260 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D caldi_25100 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D caldi_23740 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D caldi_01700 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D caldi_17560 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D caldi_10510 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:cmic00480] D caldi_27370 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D caldi_35190 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D caldi_34630 UPF0271 protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D caldi_02560 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D caldi_02280 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D caldi_12600 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D caldi_12610 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D caldi_28940 speE1; polyamine aminopropyltransferase 1 K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:cmic00542] D caldi_28630 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cmic00541] D caldi_35290 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D caldi_35300 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D caldi_12380 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D caldi_28150 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D caldi_07760 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D caldi_14580 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D caldi_28130 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D caldi_09040 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D caldi_14560 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D caldi_28140 spore coat protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D caldi_09030 spore coat protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D caldi_14570 spore coat protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D caldi_09400 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D caldi_14540 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D caldi_30990 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D caldi_28620 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D caldi_28220 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D caldi_14640 UDP-N-acetyl-D-glucosamine dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] C 00550 Peptidoglycan biosynthesis [PATH:cmic00550] D caldi_18450 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D caldi_24290 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D caldi_18460 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D caldi_24310 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D caldi_01700 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D caldi_18510 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D caldi_25100 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D caldi_18500 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D caldi_04710 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D caldi_03280 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D caldi_18490 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D caldi_18470 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D caldi_18520 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D caldi_05360 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D caldi_19770 penicillin-binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D caldi_02350 UDP-N-acetylmuramyl peptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D caldi_02360 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:cmic00552] D caldi_03280 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D caldi_28630 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D caldi_27940 N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:cmic00543] D caldi_28630 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D caldi_32190 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:cmic00730] D caldi_19710 thiC; phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D caldi_20540 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D caldi_26980 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D caldi_16780 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D caldi_26990 thiI; putative tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D caldi_09770 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D caldi_18580 hypothetical protein K03149 thiG; thiazole synthase [EC:2.8.1.10] D caldi_20530 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D caldi_18590 thiE_1; thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D caldi_20520 thiE_2; thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D caldi_17410 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D caldi_33310 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D caldi_07450 aminopyrimidine aminohydrolase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D caldi_07440 ylmB; N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase K20895 ylmB; formylaminopyrimidine deformylase [EC:3.5.1.-] C 00740 Riboflavin metabolism [PATH:cmic00740] D caldi_00080 ribBA; riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D caldi_00100 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D caldi_00060 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D caldi_00090 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D caldi_04970 ribF; riboflavin biosynthesis protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D caldi_20530 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D caldi_10380 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D caldi_03020 phenolic acid decarboxylase subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:cmic00750] D caldi_19310 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D caldi_19850 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D caldi_29690 pdxS; pyridoxal 5'-phosphate synthase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D caldi_29700 pdxT; pyridoxal 5'-phosphate synthase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:cmic00760] D caldi_31560 nadC; nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D caldi_23470 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D caldi_25510 nadD; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D caldi_31080 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D caldi_19030 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D caldi_00640 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D caldi_23080 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D caldi_09880 nadK; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:cmic00770] D caldi_00220 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D caldi_12920 thiamine pyrophosphate protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D caldi_00160 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D caldi_00170 ilvC; ketol-acid reductoisomerase (NADP(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D caldi_00210 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D caldi_16030 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D caldi_16220 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D caldi_23290 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D caldi_16040 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D caldi_31570 coaX_1; type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D caldi_31580 coaX_2; type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D caldi_17500 coaBC; peptidase ClpP K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D caldi_31080 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D caldi_17110 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D caldi_21050 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D caldi_34910 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D caldi_33470 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism [PATH:cmic00780] D caldi_17000 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D caldi_00790 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_06650 fabG_1; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_07610 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_12010 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_12220 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_13030 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_17020 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_20410 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_28400 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D caldi_35410 enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D caldi_17340 birA; bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:cmic00785] D caldi_13270 lipM; octanoyltransferase LipM K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181] D caldi_20080 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D caldi_33740 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_01390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_06490 pdhD; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_20140 bfmbC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_33710 bkdA_2; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D caldi_01360 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D caldi_06460 bkdA_1; 3-methyl-2-oxobutanoate dehydrogenase subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D caldi_33720 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D caldi_01370 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D caldi_06470 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D caldi_33730 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D caldi_01380 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D caldi_02060 acoC_1; dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D caldi_06480 bkdF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D caldi_20130 2-oxoisovalerate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D caldi_20120 bfmbAb; 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D caldi_20110 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D caldi_13290 gcvPA; putative glycine dehydrogenase (decarboxylating) subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D caldi_13280 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D caldi_13310 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D caldi_13300 gcvH_2; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:cmic00790] D caldi_20020 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D caldi_31540 7,8-dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D caldi_15560 7,8-dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D caldi_31550 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D caldi_31530 hypothetical protein K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D caldi_26050 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D caldi_00080 ribBA; riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D caldi_15470 aminodeoxychorismate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D caldi_10820 putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D caldi_32540 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D caldi_24210 moaA; cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D caldi_24190 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D caldi_31590 hypothetical protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D caldi_05520 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D caldi_24220 molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D caldi_24230 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:cmic00670] D caldi_31490 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D caldi_09730 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D caldi_15590 mtdA; MtdA bifunctional protein K00300 mtdA; methylenetetrahydrofolate/methylenetetrahydromethanopterin dehydrogenase (NADP+) [EC:1.5.1.5 1.5.1.-] D caldi_13260 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D caldi_23700 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D caldi_23670 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D caldi_17470 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D caldi_13310 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D caldi_21200 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D caldi_21220 hypothetical protein K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54] D caldi_18610 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:cmic00860] D caldi_30520 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D caldi_03120 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D caldi_34840 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D caldi_23300 gsaB; glutamate-1-semialdehyde 2,1-aminomutase 2 K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D caldi_03160 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D caldi_03140 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D caldi_33990 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D caldi_33970 hemY; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D caldi_00530 ywfI; putative heme-dependent peroxidase YwfI K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5] D caldi_26430 hypothetical protein K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D caldi_26440 hypothetical protein K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D caldi_27630 radical SAM protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] D caldi_26460 cobalamin biosynthesis protein CbiX K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D caldi_26480 cbiL; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D caldi_26450 hypothetical protein K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D caldi_26510 cbiD; cobalt-precorrin-5B C(1)-methyltransferase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D caldi_26490 hypothetical protein K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D caldi_26500 hypothetical protein K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D caldi_26520 precorrin isomerase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D caldi_26550 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D caldi_00940 hypothetical protein K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D caldi_24430 ATP--cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D caldi_22000 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D caldi_22010 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D caldi_19870 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D caldi_01980 hypothetical protein K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D caldi_25900 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D caldi_06890 GHMP kinase K16651 pduX; L-threonine kinase [EC:2.7.1.177] D caldi_19880 threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cmic00130] D caldi_03080 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D caldi_03070 menaquinone biosynthesis decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D caldi_03020 phenolic acid decarboxylase subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D caldi_03090 menG; demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D caldi_06200 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D caldi_02190 mqnA; chorismate dehydratase K11782 mqnA; chorismate dehydratase [EC:4.2.1.151] D caldi_02180 mqnE_1; aminodeoxyfutalosine synthase K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D caldi_20340 mqnE_2; aminodeoxyfutalosine synthase K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D caldi_02200 mqnC; cyclic dehypoxanthine futalosine synthase K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] D caldi_02880 wrbA; trp repressor-binding protein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:cmic00900] D caldi_09770 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D caldi_04740 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D caldi_32170 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D caldi_32180 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D caldi_04760 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D caldi_21840 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D caldi_00800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_06620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_08900 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_09220 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_11150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_14480 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_24270 mmgA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_03020 phenolic acid decarboxylase subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D caldi_09760 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D caldi_27560 heptaprenyl diphosphate synthase subunit II K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30] D caldi_04710 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation [PATH:cmic00907] D caldi_05570 yngG; hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D caldi_00340 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D caldi_27920 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D caldi_27930 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products [PATH:cmic01057] D caldi_12790 3-ketoacyl-ACP reductase K14633 gra6; ketoreductase RED2 [EC:1.1.1.-] C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:cmic00523] D caldi_28150 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D caldi_07760 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D caldi_14580 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D caldi_28130 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D caldi_09040 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D caldi_14560 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D caldi_28140 spore coat protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D caldi_09030 spore coat protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D caldi_14570 spore coat protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D caldi_09400 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D caldi_28130 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D caldi_09040 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D caldi_14560 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D caldi_13020 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:cmic00332] D caldi_02600 hypothetical protein K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D caldi_02610 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:cmic00261] D caldi_11560 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D caldi_05160 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D caldi_11870 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D caldi_05150 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D caldi_05170 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D caldi_05120 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:cmic00521] D caldi_02450 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D caldi_11840 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D caldi_16800 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D caldi_28150 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D caldi_07760 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D caldi_14580 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D caldi_28130 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D caldi_09040 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D caldi_14560 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D caldi_28140 spore coat protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D caldi_09030 spore coat protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D caldi_14570 spore coat protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D caldi_09400 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D caldi_02450 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:cmic00525] D caldi_28150 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D caldi_07760 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D caldi_14580 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D caldi_28130 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D caldi_09040 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D caldi_14560 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:cmic00401] D caldi_17200 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D caldi_01690 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D caldi_20570 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D caldi_23550 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D caldi_17280 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D caldi_17270 glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D caldi_17030 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D caldi_00790 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_06650 fabG_1; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_07610 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_12010 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_12220 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_13030 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_17020 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_20410 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_35410 enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D caldi_17010 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:cmic00999] D caldi_28390 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D caldi_13810 aroE; shikimate dehydrogenase (NADP(+)) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:cmic00362] D caldi_00340 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D caldi_34800 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D caldi_12820 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D caldi_00330 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D caldi_18670 hypothetical protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D caldi_19740 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D caldi_21490 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D caldi_24250 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D caldi_00800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_06620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_08900 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_09220 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_11150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_14480 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_24270 mmgA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:cmic00627] D caldi_02900 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D caldi_09790 amiE; aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D caldi_32290 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D caldi_03020 phenolic acid decarboxylase subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation D caldi_03820 nitrogenase subunit nifH K02588 nifH; nitrogenase iron protein NifH C 00361 Chlorocyclohexane and chlorobenzene degradation D caldi_34800 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] C 00623 Toluene degradation C 00622 Xylene degradation [PATH:cmic00622] D caldi_34800 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D caldi_12820 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00633 Nitrotoluene degradation D caldi_12410 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D caldi_12400 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D caldi_12420 pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation D caldi_00340 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:cmic00643] D caldi_02900 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D caldi_09790 amiE; aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D caldi_32290 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D caldi_34800 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D caldi_26930 hypothetical protein K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D caldi_26940 gctB; 3-oxoadipate--succinyl-CoA transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation D caldi_12820 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:cmic03020] D caldi_33010 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D caldi_33020 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D caldi_33390 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D caldi_17510 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:cmic03010] D caldi_15260 hypothetical protein K02945 RP-S1; small subunit ribosomal protein S1 D caldi_04670 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D caldi_33160 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D caldi_33380 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D caldi_33270 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D caldi_29380 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D caldi_33060 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D caldi_33240 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D caldi_33460 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D caldi_33090 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D caldi_33370 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D caldi_33050 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D caldi_33360 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D caldi_33230 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D caldi_04990 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D caldi_16930 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D caldi_33190 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D caldi_29360 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D caldi_33140 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D caldi_25400 hypothetical protein K02968 RP-S20; small subunit ribosomal protein S20 D caldi_25080 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D caldi_32510 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D caldi_33130 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D caldi_33100 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D caldi_33110 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D caldi_33220 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D caldi_33250 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D caldi_32990 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D caldi_29340 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D caldi_32980 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D caldi_32500 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D caldi_33450 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D caldi_33200 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D caldi_33290 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D caldi_33170 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D caldi_33400 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D caldi_33260 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D caldi_16880 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D caldi_19260 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D caldi_25550 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D caldi_33150 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D caldi_33120 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D caldi_33210 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D caldi_25530 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D caldi_17370 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D caldi_33180 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D caldi_33280 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D caldi_28740 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D caldi_17080 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D caldi_32320 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D caldi_29610 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D caldi_19270 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D caldi_33040 rplGB; ribosome-associated protein L7Ae-like K07590 RP-L7A; large subunit ribosomal protein L7A D caldi_r00010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:cmic00970] D caldi_t00030 tRNA-His K14226 tRNA-His; tRNA His D caldi_t00160 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D caldi_t00580 tRNA-Met K14230 tRNA-Met; tRNA Met D caldi_t00500 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D caldi_t00450 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D caldi_t00600 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D caldi_30520 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D caldi_02290 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D caldi_11970 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D caldi_17620 gatA_1; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D caldi_23380 gatA_2; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D caldi_23370 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D caldi_23390 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D caldi_07530 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D caldi_04220 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D caldi_28990 aspC; aspartate--tRNA(Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D caldi_05340 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D caldi_24840 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D caldi_24830 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D caldi_19320 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D caldi_29740 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D caldi_19810 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D caldi_32200 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D caldi_30780 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D caldi_17470 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D caldi_26060 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D caldi_25480 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D caldi_18260 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D caldi_04800 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D caldi_04210 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D caldi_19200 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D caldi_19070 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D caldi_11170 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:cmic03060] D caldi_33300 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D caldi_32480 hypothetical protein K03073 secE; preprotein translocase subunit SecE D caldi_26670 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D caldi_03610 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D caldi_03620 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D caldi_18870 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D caldi_29580 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D caldi_28070 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D caldi_16940 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D caldi_16960 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D caldi_04150 arsA; arsenic-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D caldi_21660 arsenic transporter ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D caldi_21670 arsenic transporter ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D caldi_03430 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA D caldi_16870 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D caldi_18140 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:cmic04122] D caldi_26980 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D caldi_16780 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D caldi_25660 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D caldi_16770 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D caldi_31590 hypothetical protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D caldi_24210 moaA; cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D caldi_07360 molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein D caldi_21770 molybdenum cofactor biosynthesis protein MoeB K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D caldi_24190 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D caldi_05520 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D caldi_26990 thiI; putative tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D caldi_16680 hypothetical protein K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6] C 03050 Proteasome C 03018 RNA degradation [PATH:cmic03018] D caldi_26690 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D caldi_05000 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D caldi_26340 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D caldi_15920 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D caldi_28770 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D caldi_10760 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D caldi_05210 rnj; ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D caldi_21160 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D caldi_25200 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D caldi_24170 molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D caldi_10930 hypothetical protein K03666 hfq; host factor-I protein B B 09124 Replication and repair C 03030 DNA replication [PATH:cmic03030] D caldi_15160 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D caldi_21420 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D caldi_04830 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D caldi_30470 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D caldi_30740 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D caldi_29330 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D caldi_29940 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D caldi_24590 hypothetical protein K02316 dnaG; DNA primase [EC:2.7.7.101] D caldi_29370 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D caldi_24350 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D caldi_16850 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D caldi_20980 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D caldi_21080 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D caldi_23430 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:cmic03410] D caldi_23280 ntH; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D caldi_10890 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D caldi_21070 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D caldi_35320 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D caldi_23030 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D caldi_20300 nfo; putative endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D caldi_21080 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D caldi_23430 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:cmic03420] D caldi_31040 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D caldi_27710 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D caldi_27760 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D caldi_27660 hypothetical protein K03703 uvrC; excinuclease ABC subunit C D caldi_23440 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D caldi_21080 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D caldi_23430 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:cmic03430] D caldi_10900 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D caldi_19140 mutS2; endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D caldi_10910 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D caldi_23440 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D caldi_09740 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D caldi_09750 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D caldi_29370 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D caldi_15160 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D caldi_21420 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D caldi_04830 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D caldi_30470 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D caldi_30740 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D caldi_23430 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D caldi_08330 restriction endonuclease subunit M K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:cmic03440] D caldi_29370 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D caldi_29650 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D caldi_30490 recR; recombination protein RecR K06187 recR; recombination protein RecR D caldi_15900 recA; protein RecA K03553 recA; recombination protein RecA D caldi_21080 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D caldi_18970 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D caldi_18960 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D caldi_18980 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D caldi_17350 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D caldi_15160 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D caldi_21420 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D caldi_04830 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D caldi_30470 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D caldi_30740 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D caldi_17490 hypothetical protein K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:cmic03450] D caldi_10600 ku; non-homologous end joining protein Ku K10979 ku; DNA end-binding protein Ku D caldi_10620 DNA polymerase domain-containing protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:cmic02010] D caldi_33570 tungsten ABC transporter substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D caldi_33580 ABC transporter permease K05773 tupB; tungstate transport system permease protein D caldi_33590 hypothetical protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D caldi_19130 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein D caldi_19120 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D caldi_19110 ssuB; sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D caldi_22500 nitrate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D caldi_07430 ABC transporter substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein D caldi_07420 ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein D caldi_11210 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D caldi_11220 molybdenum ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D caldi_11230 ABC transporter K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D caldi_35130 periplasmic spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D caldi_35120 hypothetical protein K11070 potC; spermidine/putrescine transport system permease protein D caldi_35110 potB; spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D caldi_35100 potA; spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D caldi_02800 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D caldi_02780 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D caldi_02790 amino acid ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D caldi_02770 glycine/betaine ABC transporter ATPase K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D caldi_10700 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D caldi_08010 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D caldi_07980 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D caldi_08000 heme ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D caldi_34410 rbsB; D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D caldi_34420 rbsC_2; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D caldi_15100 rbsC_1; ribose import permease protein RbsC K10440 rbsC; ribose transport system permease protein D caldi_15110 sugar ABC transporter permease K10440 rbsC; ribose transport system permease protein D caldi_34430 rbsA2; ribose import ATP-binding protein RbsA 2 K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D caldi_34440 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D caldi_15120 rbsA1; ribose import ATP-binding protein RbsA 1 K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D caldi_01630 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D caldi_17860 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D caldi_17960 pstS; phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D caldi_01620 phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein D caldi_17850 phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein D caldi_01610 pstA; phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D caldi_17840 phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D caldi_17980 hypothetical protein K02038 pstA; phosphate transport system permease protein D caldi_26810 pstB_3; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D caldi_01600 pstB_1; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D caldi_17870 pstB_2; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D caldi_12340 peptide ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D caldi_29460 ethanolamine utilization protein EutJ K01999 livK; branched-chain amino acid transport system substrate-binding protein D caldi_34650 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D caldi_35030 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D caldi_00760 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D caldi_20220 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D caldi_25270 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_29450 livH; branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_34660 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_35040 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_00750 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_01540 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_12070 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_12280 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_12690 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_15790 hypothetical protein K01997 livH; branched-chain amino acid transport system permease protein D caldi_20230 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_11780 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_25260 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D caldi_29440 ABC transporter K01998 livM; branched-chain amino acid transport system permease protein D caldi_34670 amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D caldi_35050 ABC transporter K01998 livM; branched-chain amino acid transport system permease protein D caldi_00740 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D caldi_01550 amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D caldi_12270 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D caldi_12700 metal-dependent hydrolase K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_20240 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D caldi_25290 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_29430 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_34680 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_35060 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_00730 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_01560 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_09270 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_11800 livG; ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_12090 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_12260 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_15770 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_20250 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_21320 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_25240 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_29420 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_34690 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_35070 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_00720 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_01570 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_09280 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_11810 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_12080 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_12250 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_12710 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_15760 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_20260 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_21310 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_00840 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D caldi_00850 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein D caldi_00860 metN; methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein D caldi_32390 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D caldi_32400 oppB; oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein D caldi_32410 oppC_2; oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D caldi_32420 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D caldi_28970 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D caldi_03760 hypothetical protein K02009 cbiN; cobalt/nickel transport protein D caldi_03770 cbiM; cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D caldi_03750 cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D caldi_28020 cobalt ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D caldi_03740 putative ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D caldi_08890 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D caldi_14490 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D caldi_31810 ecfT; energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D caldi_33430 cobalt transporter K16785 ecfT; energy-coupling factor transport system permease protein D caldi_24090 cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein D caldi_31790 ecfA_1; energy-coupling factor transporter ATP-binding protein EcfA K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D caldi_33410 ecfA_2; energy-coupling factor transporter ATP-binding protein EcfA K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D caldi_31800 ecfA2_1; energy-coupling factor transporter ATP-binding protein EcfA2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D caldi_33420 ecfA2_2; energy-coupling factor transporter ATP-binding protein EcfA2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D caldi_01830 transport permease protein K09694 nodJ; lipooligosaccharide transport system permease protein D caldi_01840 hypothetical protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein D caldi_22160 cytochrome c biogenesis protein K02195 ccmC; heme exporter protein C D caldi_32920 hypothetical protein K19340 nosF; Cu-processing system ATP-binding protein D caldi_27890 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D caldi_27900 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D caldi_35230 hypothetical protein K09812 ftsE; cell division transport system ATP-binding protein C 02060 Phosphotransferase system (PTS) [PATH:cmic02060] D caldi_07740 hypothetical protein K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D caldi_07640 PTS sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D caldi_06940 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D caldi_06950 ulaA; PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D caldi_05750 PTS fructose transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D caldi_05740 tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:cmic03070] D caldi_03610 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D caldi_03620 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D caldi_32480 hypothetical protein K03073 secE; preprotein translocase subunit SecE D caldi_26670 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D caldi_33300 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D caldi_18870 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D caldi_29580 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D caldi_28070 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D caldi_16960 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D caldi_16940 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D caldi_03430 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA B B 09132 Signal transduction C 02020 Two-component system [PATH:cmic02020] D caldi_17880 PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D caldi_17890 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D caldi_01630 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D caldi_17860 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D caldi_17960 pstS; phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D caldi_28230 flagellin K02406 fliC; flagellin D caldi_04500 motility protein A K02556 motA; chemotaxis protein MotA D caldi_02710 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D caldi_05540 tripartite tricarboxylate transporter TctA K07793 tctA; putative tricarboxylic transport membrane protein D caldi_06270 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D caldi_20650 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D caldi_20920 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D caldi_29110 DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR D caldi_16430 DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR D caldi_29620 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D caldi_09930 sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D caldi_10500 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D caldi_17690 malate oxidoreductase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D caldi_30880 hypothetical protein K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D caldi_30890 nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D caldi_15690 fdoH; formate dehydrogenase subunit beta K08349 fdnH; formate dehydrogenase-N, beta subunit D caldi_13420 DNA-binding response regulator K07692 degU; two-component system, NarL family, response regulator DegU D caldi_32860 histidine kinase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D caldi_32870 DNA-binding response regulator K07695 devR; two-component system, NarL family, response regulator DevR D caldi_13410 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D caldi_10200 type II/IV secretion system-related protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D caldi_13360 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D caldi_13340 type II secretion system protein K12511 tadC; tight adherence protein C D caldi_26790 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D caldi_10990 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D caldi_12530 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D caldi_34050 atoC; acetoacetate metabolism regulatory protein AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC D caldi_34030 atoE; short-chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter D caldi_00800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_06620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_08900 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_09220 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_11150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_14480 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_24270 mmgA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_26760 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D caldi_05090 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D caldi_14320 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D caldi_24790 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D caldi_05030 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D caldi_14310 cheW-2_2; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D caldi_24780 cheW-2_3; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D caldi_05040 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D caldi_05070 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D caldi_14000 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D caldi_14250 cheY-2_1; response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D caldi_16470 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D caldi_24710 cheY-2_2; response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D caldi_05080 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D caldi_14290 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D caldi_24760 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D caldi_02020 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D caldi_28620 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:cmic02024] D caldi_10930 hypothetical protein K03666 hfq; host factor-I protein D caldi_17280 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D caldi_17270 glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D caldi_29460 ethanolamine utilization protein EutJ K01999 livK; branched-chain amino acid transport system substrate-binding protein D caldi_34650 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D caldi_35030 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D caldi_00760 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D caldi_20220 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D caldi_25270 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_29450 livH; branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_34660 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_35040 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_00750 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_01540 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_12070 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_12280 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_12690 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_15790 hypothetical protein K01997 livH; branched-chain amino acid transport system permease protein D caldi_20230 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_11780 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_25260 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D caldi_29440 ABC transporter K01998 livM; branched-chain amino acid transport system permease protein D caldi_34670 amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D caldi_35050 ABC transporter K01998 livM; branched-chain amino acid transport system permease protein D caldi_00740 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D caldi_01550 amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D caldi_12270 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D caldi_12700 metal-dependent hydrolase K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_20240 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D caldi_25290 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_29430 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_34680 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_35060 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_00730 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_01560 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_09270 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_11800 livG; ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_12090 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_12260 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_15770 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_20250 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_21320 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_25240 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_29420 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_34690 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_35070 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_00720 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_01570 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_09280 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_11810 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_12080 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_12250 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_12710 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_15760 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_20260 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_21310 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_25280 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D caldi_00830 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D caldi_18170 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D caldi_02020 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D caldi_00100 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D caldi_32390 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D caldi_32400 oppB; oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein D caldi_32410 oppC_2; oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D caldi_32420 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D caldi_27340 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D caldi_17600 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D caldi_27330 peptide ABC transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein D caldi_28960 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D caldi_29190 appB_2; oligopeptide transport system permease protein AppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D caldi_03800 peptide ABC transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein D caldi_06180 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D caldi_17590 glutathione ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D caldi_18190 appB_1; oligopeptide transport system permease protein AppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D caldi_27320 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D caldi_28950 diguanylate cyclase K02034 ABC.PE.P1; peptide/nickel transport system permease protein D caldi_29200 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D caldi_03790 glutathione ABC transporter permease GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D caldi_06170 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D caldi_17580 oppC_1; peptide ABC transporter substrate-binding protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D caldi_18180 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D caldi_03780 oppD; oligopeptide ABC transporter ATP-binding protein OppF K02031 ddpD; peptide/nickel transport system ATP-binding protein D caldi_23420 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D caldi_32430 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D caldi_23410 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D caldi_29580 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D caldi_32480 hypothetical protein K03073 secE; preprotein translocase subunit SecE D caldi_26670 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D caldi_33300 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D caldi_18870 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D caldi_28070 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D caldi_16960 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D caldi_16940 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D caldi_13420 DNA-binding response regulator K07692 degU; two-component system, NarL family, response regulator DegU D caldi_09930 sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:cmic02030] D caldi_14320 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D caldi_24790 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D caldi_34410 rbsB; D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D caldi_28970 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D caldi_05040 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D caldi_05030 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D caldi_14310 cheW-2_2; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D caldi_24780 cheW-2_3; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D caldi_05070 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D caldi_14000 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D caldi_14250 cheY-2_1; response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D caldi_16470 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D caldi_24710 cheY-2_2; response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D caldi_05080 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D caldi_14290 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D caldi_24760 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D caldi_05060 cheD; putative chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D caldi_14300 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D caldi_24770 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D caldi_05090 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D caldi_04400 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D caldi_13980 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D caldi_14180 hypothetical protein K02410 fliG; flagellar motor switch protein FliG D caldi_24650 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D caldi_04530 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D caldi_04500 motility protein A K02556 motA; chemotaxis protein MotA D caldi_04510 OmpA/MotB protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:cmic02040] D caldi_04380 hypothetical protein K02408 fliE; flagellar hook-basal body complex protein FliE D caldi_04400 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D caldi_13980 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D caldi_14180 hypothetical protein K02410 fliG; flagellar motor switch protein FliG D caldi_24650 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D caldi_04420 EscN/YscN/HrcN family type III secretion system ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D caldi_04530 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D caldi_04560 hypothetical protein K02419 fliP; flagellar biosynthesis protein FliP D caldi_04570 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D caldi_04600 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D caldi_04590 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D caldi_04360 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D caldi_04370 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D caldi_04480 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D caldi_28420 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D caldi_28230 flagellin K02406 fliC; flagellin D caldi_04500 motility protein A K02556 motA; chemotaxis protein MotA D caldi_04510 OmpA/MotB protein K02557 motB; chemotaxis protein MotB D caldi_24580 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor D caldi_26760 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D caldi_26690 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:cmic04980] D caldi_24430 ATP--cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D caldi_03340 GTPase K07588 MMAA; GTPase [EC:3.6.5.-] D caldi_21200 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:cmic01501] D caldi_32390 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D caldi_32400 oppB; oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein D caldi_32410 oppC_2; oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D caldi_32420 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D caldi_13020 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 01502 Vancomycin resistance [PATH:cmic01502] D caldi_25100 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D caldi_34930 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D caldi_18500 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D caldi_18490 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D caldi_18470 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:cmic01000] C 01001 Protein kinases [BR:cmic01001] D caldi_17420 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D caldi_08130 cap5B; tyrosine protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D caldi_17880 PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D caldi_32860 histidine kinase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D caldi_31720 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D caldi_20050 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D caldi_05040 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:cmic01009] D caldi_11700 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D caldi_21160 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D caldi_17430 protein-serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:cmic01002] D caldi_18140 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D caldi_17180 GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78] D caldi_23820 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D caldi_00260 peptidase C26 K07010 K07010; putative glutamine amidotransferase D caldi_12560 anthranilate synthase component II K07010 K07010; putative glutamine amidotransferase D caldi_23720 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D caldi_09830 glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D caldi_27400 glmS; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D caldi_06530 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D caldi_35000 protease K05520 yhbO; deglycase [EC:3.5.1.124] D caldi_16000 protease K05520 yhbO; deglycase [EC:3.5.1.124] D caldi_06160 peptidase M20 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D caldi_03730 argE; peptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D caldi_33320 type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D caldi_33780 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D caldi_31330 ftsH_3; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D caldi_02590 ftsH_1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D caldi_18370 ftsH_2; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D caldi_04750 zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D caldi_05360 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D caldi_19770 penicillin-binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D caldi_26150 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D caldi_26120 lon; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D caldi_26130 ATP-dependent protease LonB K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53] D caldi_11010 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D caldi_16870 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D caldi_27870 peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D caldi_07550 rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein D caldi_06080 rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein D caldi_09920 SpoIVB peptidase K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116] D caldi_04110 putative carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D caldi_23360 peptidase U61 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D caldi_04330 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D caldi_27370 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D caldi_35190 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] C 01003 Glycosyltransferases [BR:cmic01003] D caldi_27940 N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D caldi_28630 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D caldi_18650 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] C 01005 Lipopolysaccharide biosynthesis proteins [BR:cmic01005] D caldi_28630 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cmic01011] D caldi_18450 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D caldi_24290 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D caldi_18460 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D caldi_24310 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D caldi_01700 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D caldi_18510 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D caldi_25100 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D caldi_34930 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D caldi_04110 putative carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D caldi_23360 peptidase U61 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D caldi_18490 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D caldi_18470 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D caldi_03280 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D caldi_18520 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D caldi_05360 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D caldi_19770 penicillin-binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D caldi_21040 transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D caldi_07580 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D caldi_29020 hypothetical protein K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D caldi_07970 hypothetical protein K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D caldi_28490 stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] C 01004 Lipid biosynthesis proteins [BR:cmic01004] D caldi_17030 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D caldi_17050 3-oxoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D caldi_17000 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D caldi_00790 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_06650 fabG_1; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_07610 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_12010 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_12220 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_13030 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_17020 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_20410 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D caldi_28400 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D caldi_35410 enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D caldi_31760 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D caldi_34040 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D caldi_07460 acyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D caldi_25280 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D caldi_00830 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D caldi_18170 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D caldi_00970 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D caldi_09100 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D caldi_17060 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D caldi_14910 plsY2; glycerol-3-phosphate acyltransferase 2 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] C 01008 Polyketide biosynthesis proteins [BR:cmic01008] D caldi_12790 3-ketoacyl-ACP reductase K14633 gra6; ketoreductase RED2 [EC:1.1.1.-] C 01006 Prenyltransferases [BR:cmic01006] D caldi_09760 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D caldi_27560 heptaprenyl diphosphate synthase subunit II K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30] D caldi_04710 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D caldi_10920 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D caldi_03080 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:cmic01007] D caldi_30520 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D caldi_19070 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D caldi_11170 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D caldi_32200 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D caldi_30780 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D caldi_18260 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D caldi_26060 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D caldi_25480 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D caldi_04220 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D caldi_05340 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D caldi_28990 aspC; aspartate--tRNA(Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D caldi_04210 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D caldi_24840 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D caldi_24830 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D caldi_29740 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D caldi_04800 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D caldi_19320 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D caldi_07530 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D caldi_19200 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D caldi_01690 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D caldi_20570 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D caldi_00460 diaminopimelate aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117] D caldi_17550 dapL; LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D caldi_24380 aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D caldi_23550 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D caldi_23990 argD_2; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D caldi_11950 gabT_1; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D caldi_12230 gabT_2; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D caldi_24410 gabT_3; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D caldi_11830 argD_1; acetylornithine/acetyl-lysine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D caldi_12300 yhxA; putative aminotransferase YhxA K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77] D caldi_34840 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D caldi_23300 gsaB; glutamate-1-semialdehyde 2,1-aminomutase 2 K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D caldi_23260 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D caldi_33470 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D caldi_31620 alanine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:cmic00194] D caldi_28520 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D caldi_28530 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D caldi_28540 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D caldi_28550 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D caldi_28570 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D caldi_28580 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:cmic03000] D caldi_23460 citR; HTH-type transcriptional regulator CitR K19242 citR; LysR family transcriptional regulator, repressor for citA D caldi_01860 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D caldi_28470 stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D D caldi_34460 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D caldi_05590 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D caldi_06360 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D caldi_07620 yvoA; HTH-type transcriptional repressor YvoA K24969 dasR; GntR family transcriptional regulator, nutrient-sensing system regulator D caldi_23510 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D caldi_07930 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D caldi_12720 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D caldi_25620 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D caldi_25680 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D caldi_30540 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D caldi_12180 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D caldi_02020 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D caldi_16790 AsnC family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D caldi_11460 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D caldi_22800 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D caldi_00550 transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons D caldi_07110 transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D caldi_17340 birA; bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D caldi_00870 sigma-54-dependent Fis family transcriptional regulator K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein D caldi_30960 pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D caldi_15460 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D caldi_27550 rex; redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D caldi_04350 codY; GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor D caldi_31300 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D caldi_02510 csoR; copper-sensing transcriptional repressor CsoR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D caldi_22310 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D caldi_30770 AbrB family transcriptional regulator K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D caldi_31060 AbrB family transcriptional regulator K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D caldi_29540 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D caldi_09890 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D caldi_25220 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D caldi_07450 aminopyrimidine aminohydrolase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D caldi_32070 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response D caldi_17810 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D caldi_23070 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D caldi_18550 mraZ; transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:cmic03021] D caldi_33390 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D caldi_33010 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D caldi_33020 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D caldi_17510 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D caldi_24580 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor D caldi_27160 sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D caldi_21100 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D caldi_11250 DNA-directed RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D caldi_33600 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D caldi_28920 hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D caldi_02990 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D caldi_08180 hypothetical protein K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D caldi_10470 sigF; RNA polymerase sigma-F factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D caldi_13870 hypothetical protein K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D caldi_18360 RNA polymerase sporulation sigma factor SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D caldi_18380 RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D caldi_32260 RNA polymerase factor sigma-70 K27000 sigH; RNA polymerase sigma-H factor D caldi_18940 RNA polymerase sigma factor SigI K03093 sigI; RNA polymerase sigma-I factor D caldi_26760 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D caldi_04890 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D caldi_09720 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D caldi_32490 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D caldi_27190 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D caldi_31880 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D caldi_28770 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:cmic03019] D caldi_20740 ATPase AAA K13525 VCP; transitional endoplasmic reticulum ATPase D caldi_20850 ATPase AAA K13525 VCP; transitional endoplasmic reticulum ATPase D caldi_25560 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D caldi_16990 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D caldi_05210 rnj; ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D caldi_10760 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D caldi_26340 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D caldi_15920 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D caldi_26690 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D caldi_05000 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D caldi_28770 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D caldi_21160 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D caldi_25200 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D caldi_24170 molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D caldi_10930 hypothetical protein K03666 hfq; host factor-I protein D caldi_27590 RNase adaptor protein RapZ K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:cmic03011] D caldi_15260 hypothetical protein K02945 RP-S1; small subunit ribosomal protein S1 D caldi_04670 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D caldi_33160 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D caldi_33380 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D caldi_33270 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D caldi_29380 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D caldi_33060 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D caldi_33240 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D caldi_33460 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D caldi_33090 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D caldi_33370 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D caldi_33050 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D caldi_33360 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D caldi_33230 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D caldi_04990 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D caldi_16930 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D caldi_33190 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D caldi_29360 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D caldi_33140 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D caldi_25400 hypothetical protein K02968 RP-S20; small subunit ribosomal protein S20 D caldi_25080 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D caldi_32510 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D caldi_33130 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D caldi_33100 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D caldi_33110 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D caldi_33220 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D caldi_33250 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D caldi_29340 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D caldi_32980 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D caldi_32500 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D caldi_32990 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D caldi_33450 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D caldi_33200 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D caldi_33290 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D caldi_33170 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D caldi_33400 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D caldi_33260 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D caldi_16880 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D caldi_19260 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D caldi_25550 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D caldi_33150 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D caldi_33120 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D caldi_33210 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D caldi_25530 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D caldi_17370 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D caldi_33180 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D caldi_33280 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D caldi_28740 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D caldi_17080 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D caldi_32320 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D caldi_29610 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D caldi_19270 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D caldi_33040 rplGB; ribosome-associated protein L7Ae-like K07590 RP-L7A; large subunit ribosomal protein L7A D caldi_r00010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA C 03009 Ribosome biogenesis [BR:cmic03009] D caldi_16990 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D caldi_20740 ATPase AAA K13525 VCP; transitional endoplasmic reticulum ATPase D caldi_20850 ATPase AAA K13525 VCP; transitional endoplasmic reticulum ATPase D caldi_24920 era; GTPase Era K03595 era; GTPase D caldi_25520 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-] D caldi_04890 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D caldi_09720 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D caldi_32490 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D caldi_30810 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D caldi_17450 ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D caldi_18540 rsmH; ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D caldi_30760 rsmI; ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D caldi_09820 hypothetical protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D caldi_32230 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D caldi_32060 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D caldi_17440 rlmN; putative dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D caldi_23350 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D caldi_10690 hypothetical protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D caldi_18130 ylyB; putative RNA pseudouridine synthase YlyB K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D caldi_35440 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D caldi_16900 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D caldi_16250 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D caldi_25180 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D caldi_25560 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D caldi_07560 putative pre-16S rRNA nuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D caldi_32210 mrnC; mini-ribonuclease 3 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D caldi_15920 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D caldi_17410 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D caldi_15000 der; GTPase Der K03977 engA; GTPase D caldi_16860 ribosome biogenesis GTPase A K14540 rbgA; ribosome biogenesis GTPase A D caldi_10970 hypothetical protein K03665 hflX; GTPase D caldi_28700 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D caldi_03670 (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D caldi_04940 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D caldi_04880 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D caldi_29640 hypothetical protein K14761 rlbA; ribosome-associated protein D caldi_25490 rsfS; ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein D caldi_24960 endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor D caldi_28100 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor D caldi_34810 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:cmic03016] D caldi_30520 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D caldi_04800 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D caldi_18260 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D caldi_25480 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D caldi_30780 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D caldi_04220 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D caldi_07530 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D caldi_05340 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D caldi_19320 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D caldi_29740 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D caldi_32200 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D caldi_26060 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D caldi_04210 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D caldi_19200 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D caldi_19070 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D caldi_11170 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D caldi_03680 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D caldi_25090 hinT; histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D caldi_33440 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D caldi_04960 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D caldi_26980 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D caldi_16780 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D caldi_28700 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D caldi_10920 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D caldi_16400 selD_1; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D caldi_19800 selD_2; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D caldi_15910 RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D caldi_24840 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D caldi_24830 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D caldi_28990 aspC; aspartate--tRNA(Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D caldi_30460 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D caldi_31840 dusB; tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D caldi_10860 miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D caldi_25110 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D caldi_04320 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D caldi_16890 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D caldi_19220 tRNA/rRNA methyltransferase SpoU K03437 spoU; RNA methyltransferase, TrmH family D caldi_16770 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D caldi_25660 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D caldi_20320 heme biosynthesis protein HemY K13628 iscA; iron-sulfur cluster assembly protein D caldi_18910 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D caldi_32540 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D caldi_18900 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D caldi_26990 thiI; putative tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D caldi_35430 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D caldi_24340 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D caldi_35420 yjeE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D caldi_26340 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D caldi_05000 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:cmic03012] D caldi_04920 hypothetical protein K02519 infB; translation initiation factor IF-2 D caldi_19280 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D caldi_19180 ABC transporter K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D caldi_04680 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D caldi_33080 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D caldi_32010 fusA_1; elongation factor G K02355 fusA; elongation factor G D caldi_33070 fusA_2; elongation factor G K02355 fusA; elongation factor G D caldi_02390 selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor D caldi_28720 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D caldi_04700 ribosome-recycling factor K02838 frr; ribosome recycling factor D caldi_28710 prmC; release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D caldi_31020 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D caldi_33340 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D caldi_09590 efp; elongation factor P K02356 efp; elongation factor P D caldi_27990 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:cmic03110] D caldi_32100 ATP-dependent Clp protease ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D caldi_26140 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D caldi_04340 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D caldi_25200 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D caldi_24170 molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D caldi_25190 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D caldi_17380 hslO; 33 kDa chaperonin K04083 hslO; molecular chaperone Hsp33 D caldi_25210 hypothetical protein K03687 GRPE; molecular chaperone GrpE D caldi_17290 hypothetical protein K13993 HSP20; HSP20 family protein D caldi_24180 groS_1; 10 kDa chaperonin K04078 groES; chaperonin GroES D caldi_24470 groS_2; 10 kDa chaperonin K04078 groES; chaperonin GroES D caldi_31330 ftsH_3; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D caldi_02590 ftsH_1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D caldi_18370 ftsH_2; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D caldi_04230 thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:cmic04131] D caldi_11730 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D caldi_16230 vesicle-fusing ATPase K06027 NSF; vesicle-fusing ATPase [EC:3.6.4.6] D caldi_20740 ATPase AAA K13525 VCP; transitional endoplasmic reticulum ATPase D caldi_20850 ATPase AAA K13525 VCP; transitional endoplasmic reticulum ATPase D caldi_04150 arsA; arsenic-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D caldi_21660 arsenic transporter ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D caldi_21670 arsenic transporter ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D caldi_26740 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D caldi_16170 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D caldi_20150 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D caldi_21150 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:cmic03032] D caldi_24350 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D caldi_31090 transcriptional regulator K03530 hupB; DNA-binding protein HU-beta D caldi_29620 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D caldi_29330 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D caldi_29940 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D caldi_24590 hypothetical protein K02316 dnaG; DNA primase [EC:2.7.7.101] D caldi_29370 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D caldi_15160 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D caldi_21420 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D caldi_04830 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D caldi_30740 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D caldi_30470 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D caldi_16850 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D caldi_20980 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D caldi_21080 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D caldi_23430 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D caldi_08330 restriction endonuclease subunit M K06223 dam; DNA adenine methylase [EC:2.1.1.72] D caldi_29680 hypothetical protein K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D caldi_29670 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D caldi_04310 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D caldi_08360 DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:cmic03036] D caldi_16990 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D caldi_31090 transcriptional regulator K03530 hupB; DNA-binding protein HU-beta D caldi_29620 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D caldi_10930 hypothetical protein K03666 hfq; host factor-I protein D caldi_10550 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A D caldi_10560 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B D caldi_18410 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D caldi_27900 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D caldi_35230 hypothetical protein K09812 ftsE; cell division transport system ATP-binding protein D caldi_05270 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D caldi_18480 spoVE; stage V sporulation protein E K03588 ftsW; cell division protein FtsW D caldi_27890 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D caldi_18400 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D caldi_25950 site-determining protein K03609 minD; septum site-determining protein MinD D caldi_25940 cell division topological specificity factor K03608 minE; cell division topological specificity factor D caldi_18280 divIVA; septum formation initiator K04074 divIVA; cell division initiation protein D caldi_25990 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D caldi_28460 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D caldi_25930 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D caldi_29550 sporulation initiation inhibitor Soj K03496 parA; chromosome partitioning protein D caldi_29540 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D caldi_04320 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D caldi_10420 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D caldi_21130 iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D caldi_27570 whiA; putative sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:cmic03400] D caldi_10890 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D caldi_23280 ntH; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D caldi_05010 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D caldi_35320 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D caldi_23030 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D caldi_21070 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D caldi_20300 nfo; putative endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D caldi_23430 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D caldi_21080 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D caldi_27710 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D caldi_27760 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D caldi_27660 hypothetical protein K03703 uvrC; excinuclease ABC subunit C D caldi_23440 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D caldi_33010 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D caldi_33020 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D caldi_33390 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D caldi_17510 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D caldi_31040 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D caldi_10900 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D caldi_19140 mutS2; endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D caldi_10910 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D caldi_09740 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D caldi_09750 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D caldi_15160 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D caldi_21420 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D caldi_04830 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D caldi_30740 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D caldi_30470 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D caldi_29370 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D caldi_08330 restriction endonuclease subunit M K06223 dam; DNA adenine methylase [EC:2.1.1.72] D caldi_15900 recA; protein RecA K03553 recA; recombination protein RecA D caldi_18970 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D caldi_18960 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D caldi_18980 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D caldi_17490 hypothetical protein K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D caldi_05780 hypothetical protein K03547 sbcD; DNA repair protein SbcD/Mre11 D caldi_32120 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D caldi_29650 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D caldi_17350 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D caldi_30490 recR; recombination protein RecR K06187 recR; recombination protein RecR D caldi_09900 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D caldi_15870 hypothetical protein K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D caldi_15880 addB; ATP-dependent helicase/deoxyribonuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D caldi_03940 cas1-1; CRISPR-associated endonuclease Cas1 1 K15342 cas1; CRISP-associated protein Cas1 D caldi_10600 ku; non-homologous end joining protein Ku K10979 ku; DNA end-binding protein Ku D caldi_10620 DNA polymerase domain-containing protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D caldi_29680 hypothetical protein K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D caldi_29670 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D caldi_04310 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D caldi_31090 transcriptional regulator K03530 hupB; DNA-binding protein HU-beta D caldi_24860 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D caldi_11010 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D caldi_11520 DNA polymerase III subunit epsilon K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D caldi_04950 phosphoesterase RecJ-like protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:cmic03029] D caldi_04920 hypothetical protein K02519 infB; translation initiation factor IF-2 D caldi_19280 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D caldi_04680 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D caldi_33080 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D caldi_32010 fusA_1; elongation factor G K02355 fusA; elongation factor G D caldi_33070 fusA_2; elongation factor G K02355 fusA; elongation factor G D caldi_24920 era; GTPase Era K03595 era; GTPase D caldi_19070 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D caldi_25480 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D caldi_04220 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D caldi_02290 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D caldi_11970 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D caldi_17620 gatA_1; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D caldi_23380 gatA_2; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D caldi_23370 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D caldi_23390 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D caldi_29370 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D caldi_25200 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D caldi_25210 hypothetical protein K03687 GRPE; molecular chaperone GrpE D caldi_24170 molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D caldi_24180 groS_1; 10 kDa chaperonin K04078 groES; chaperonin GroES D caldi_24470 groS_2; 10 kDa chaperonin K04078 groES; chaperonin GroES D caldi_25190 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D caldi_26980 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D caldi_16780 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D caldi_21130 iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D caldi_29580 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:cmic02000] D caldi_11210 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D caldi_11220 molybdenum ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D caldi_11230 ABC transporter K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D caldi_33570 tungsten ABC transporter substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D caldi_33580 ABC transporter permease K05773 tupB; tungstate transport system permease protein D caldi_33590 hypothetical protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D caldi_19130 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein D caldi_19120 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D caldi_19110 ssuB; sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D caldi_22500 nitrate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D caldi_35130 periplasmic spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D caldi_35120 hypothetical protein K11070 potC; spermidine/putrescine transport system permease protein D caldi_35110 potB; spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D caldi_35100 potA; spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D caldi_02800 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D caldi_02780 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D caldi_02790 amino acid ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D caldi_02770 glycine/betaine ABC transporter ATPase K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D caldi_07430 ABC transporter substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein D caldi_07420 ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein D caldi_22480 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D caldi_13910 sulfonate ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D caldi_22490 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D caldi_00910 ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D caldi_01320 nitrate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D caldi_07410 ABC transporter K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D caldi_13920 nitrate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D caldi_10700 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D caldi_15120 rbsA1; ribose import ATP-binding protein RbsA 1 K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D caldi_34410 rbsB; D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D caldi_34420 rbsC_2; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D caldi_15100 rbsC_1; ribose import permease protein RbsC K10440 rbsC; ribose transport system permease protein D caldi_15110 sugar ABC transporter permease K10440 rbsC; ribose transport system permease protein D caldi_34430 rbsA2; ribose import ATP-binding protein RbsA 2 K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D caldi_08010 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D caldi_07980 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D caldi_08000 heme ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D caldi_20890 yjkA; UPF0014 membrane protein YjkA K02069 STAR2; UDP-glucose/iron transport system permease protein D caldi_02230 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D caldi_14960 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D caldi_02240 ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D caldi_12900 ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D caldi_14970 ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D caldi_02250 ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D caldi_12890 hypothetical protein K02026 ABC.MS.P1; multiple sugar transport system permease protein D caldi_14980 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D caldi_01630 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D caldi_17860 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D caldi_17960 pstS; phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D caldi_01620 phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein D caldi_17850 phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein D caldi_01610 pstA; phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D caldi_17840 phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D caldi_17980 hypothetical protein K02038 pstA; phosphate transport system permease protein D caldi_26810 pstB_3; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D caldi_01600 pstB_1; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D caldi_17870 pstB_2; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D caldi_12340 peptide ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D caldi_29460 ethanolamine utilization protein EutJ K01999 livK; branched-chain amino acid transport system substrate-binding protein D caldi_34650 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D caldi_35030 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D caldi_00760 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D caldi_20220 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D caldi_25270 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_29450 livH; branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_34660 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_35040 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_00750 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_01540 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_12070 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_12280 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_12690 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_15790 hypothetical protein K01997 livH; branched-chain amino acid transport system permease protein D caldi_20230 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_11780 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D caldi_25260 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D caldi_29440 ABC transporter K01998 livM; branched-chain amino acid transport system permease protein D caldi_34670 amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D caldi_35050 ABC transporter K01998 livM; branched-chain amino acid transport system permease protein D caldi_00740 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D caldi_01550 amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D caldi_12270 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D caldi_12700 metal-dependent hydrolase K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_20240 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D caldi_25290 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_29430 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_34680 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_35060 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_00730 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_01560 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_09270 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_11800 livG; ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_12090 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_12260 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_15770 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_20250 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_21320 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D caldi_25240 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_29420 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_34690 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_35070 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_00720 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_01570 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_09280 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_11810 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_12080 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_12250 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_12710 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_15760 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_20260 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_21310 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D caldi_00840 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D caldi_00850 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein D caldi_00860 metN; methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein D caldi_12360 amino acid ABC transporter, periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D caldi_02330 glutamine ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D caldi_12350 glutamine ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D caldi_02340 arginine ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D caldi_32390 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D caldi_32400 oppB; oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein D caldi_32410 oppC_2; oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D caldi_32420 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D caldi_28970 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D caldi_27340 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D caldi_17600 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D caldi_27330 peptide ABC transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein D caldi_28960 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D caldi_29190 appB_2; oligopeptide transport system permease protein AppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D caldi_03800 peptide ABC transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein D caldi_06180 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D caldi_17590 glutathione ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D caldi_18190 appB_1; oligopeptide transport system permease protein AppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D caldi_27320 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D caldi_28950 diguanylate cyclase K02034 ABC.PE.P1; peptide/nickel transport system permease protein D caldi_29200 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D caldi_03790 glutathione ABC transporter permease GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D caldi_06170 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D caldi_17580 oppC_1; peptide ABC transporter substrate-binding protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D caldi_18180 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D caldi_03780 oppD; oligopeptide ABC transporter ATP-binding protein OppF K02031 ddpD; peptide/nickel transport system ATP-binding protein D caldi_23420 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D caldi_32430 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D caldi_23410 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D caldi_01960 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D caldi_01950 cobalamin import system permease BtuC K25027 btuC; cobalamin transport system permease protein D caldi_03760 hypothetical protein K02009 cbiN; cobalt/nickel transport protein D caldi_03750 cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D caldi_03770 cbiM; cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D caldi_28020 cobalt ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D caldi_03740 putative ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D caldi_08890 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D caldi_14490 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D caldi_24080 hypothetical protein K16928 mtaT; energy-coupling factor transport system substrate-specific component D caldi_31810 ecfT; energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D caldi_33430 cobalt transporter K16785 ecfT; energy-coupling factor transport system permease protein D caldi_24090 cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein D caldi_31790 ecfA_1; energy-coupling factor transporter ATP-binding protein EcfA K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D caldi_33410 ecfA_2; energy-coupling factor transporter ATP-binding protein EcfA K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D caldi_31800 ecfA2_1; energy-coupling factor transporter ATP-binding protein EcfA2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D caldi_33420 ecfA2_2; energy-coupling factor transporter ATP-binding protein EcfA2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D caldi_24100 cobalt ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D caldi_01830 transport permease protein K09694 nodJ; lipooligosaccharide transport system permease protein D caldi_01840 hypothetical protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein D caldi_32920 hypothetical protein K19340 nosF; Cu-processing system ATP-binding protein D caldi_01040 transport permease protein K25181 ybhS; drug efflux transport system permease protein D caldi_01020 ybhF-N; ABC transporter ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein D caldi_13160 macrolide ABC transporter ATP-binding protein K24949 yknY; antimicrobial peptide resistance transport system ATP-binding protein [EC:7.6.2.-] D caldi_22160 cytochrome c biogenesis protein K02195 ccmC; heme exporter protein C D caldi_27890 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D caldi_27900 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D caldi_35230 hypothetical protein K09812 ftsE; cell division transport system ATP-binding protein D caldi_26910 transport permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D caldi_33640 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D caldi_07480 transport permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D caldi_26900 daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D caldi_33630 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D caldi_07490 daunorubicin ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D caldi_19420 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D caldi_22180 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D caldi_13150 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D caldi_06760 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D caldi_18070 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D caldi_24140 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D caldi_25820 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D caldi_27670 multidrug resistance protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D caldi_00320 MFS transporter K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein D caldi_32620 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D caldi_07740 hypothetical protein K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D caldi_05750 PTS fructose transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D caldi_05760 hypothetical protein K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-] D caldi_07640 PTS sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D caldi_06940 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D caldi_06950 ulaA; PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D caldi_15430 porin K02440 glpF; glycerol uptake facilitator D caldi_19500 hypothetical protein K03320 amt; ammonium transporter, Amt family D caldi_09810 amiS; putative transporter protein AmiS K22112 amiS; putative amide transporter protein D caldi_04500 motility protein A K02556 motA; chemotaxis protein MotA D caldi_04510 OmpA/MotB protein K02557 motB; chemotaxis protein MotB D caldi_34550 hypothetical protein K06199 crcB; fluoride exporter D caldi_31740 sodium:solute symporter K14393 actP; cation/acetate symporter D caldi_23130 gerN; sodium:proton antiporter K26730 napA; Na+:H+ antiporter D caldi_19240 K+ transporter Trk K03498 trkH; trk/ktr system potassium uptake protein D caldi_01790 trkA_1; Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein D caldi_01800 trkA_2; Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein D caldi_19230 potassium transporter Trk K03499 trkA; trk/ktr system potassium uptake protein D caldi_19250 potassium transporter Trk K03499 trkA; trk/ktr system potassium uptake protein D caldi_23800 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D caldi_09540 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family D caldi_26620 chromate transporter K07240 chrA; chromate transporter D caldi_15230 mntH; divalent metal cation transporter MntH K03322 mntH; manganese transport protein D caldi_04150 arsA; arsenic-transporting ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D caldi_21660 arsenic transporter ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D caldi_21670 arsenic transporter ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D caldi_02710 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D caldi_05540 tripartite tricarboxylate transporter TctA K07793 tctA; putative tricarboxylic transport membrane protein D caldi_06270 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D caldi_20650 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D caldi_20920 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D caldi_31820 membrane protein K16788 niaX; niacin transporter D caldi_18480 spoVE; stage V sporulation protein E K03588 ftsW; cell division protein FtsW D caldi_03180 iron permease K07243 FTR; high-affinity iron transporter D caldi_19330 hppA1; putative K(+)-stimulated pyrophosphate-energized sodium pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D caldi_18680 methylmalonyl-CoA carboxyltransferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D caldi_18670 hypothetical protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D caldi_11050 cytochrome C biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein D caldi_30880 hypothetical protein K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D caldi_30890 nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D caldi_15690 fdoH; formate dehydrogenase subunit beta K08349 fdnH; formate dehydrogenase-N, beta subunit D caldi_16440 molybdopterin oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D caldi_16450 4Fe-4S ferredoxin K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit D caldi_16460 oxidoreductase K00185 dmsC; dimethyl sulfoxide reductase membrane subunit D caldi_16080 formate dehydrogenase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D caldi_16110 hypothetical protein K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D caldi_08130 cap5B; tyrosine protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D caldi_34590 hypothetical protein K04758 feoA; ferrous iron transport protein A D caldi_34580 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B D caldi_04820 magnesium transporter MgtC K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:cmic02044] D caldi_19640 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D caldi_19630 secretion system protein K02653 pilC; type IV pilus assembly protein PilC D caldi_23100 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D caldi_10200 type II/IV secretion system-related protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D caldi_13360 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D caldi_13340 type II secretion system protein K12511 tadC; tight adherence protein C D caldi_13410 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D caldi_28650 hypothetical protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D caldi_04600 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D caldi_04590 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D caldi_27260 hypothetical protein K04061 flhB2; flagellar biosynthesis protein D caldi_04420 EscN/YscN/HrcN family type III secretion system ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D caldi_04560 hypothetical protein K02419 fliP; flagellar biosynthesis protein FliP D caldi_04570 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D caldi_28070 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D caldi_03610 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D caldi_32480 hypothetical protein K03073 secE; preprotein translocase subunit SecE D caldi_03620 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D caldi_26670 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D caldi_33300 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D caldi_16940 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D caldi_16960 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D caldi_18870 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D caldi_29580 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D caldi_03430 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA C 02042 Bacterial toxins C 02022 Two-component system [BR:cmic02022] D caldi_17880 PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D caldi_17890 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D caldi_29110 DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR D caldi_16430 DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR D caldi_01650 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D caldi_13140 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D caldi_13420 DNA-binding response regulator K07692 degU; two-component system, NarL family, response regulator DegU D caldi_32860 histidine kinase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D caldi_32870 DNA-binding response regulator K07695 devR; two-component system, NarL family, response regulator DevR D caldi_09930 sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D caldi_31720 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D caldi_20050 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D caldi_01890 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator D caldi_20040 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator D caldi_31710 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator D caldi_34050 atoC; acetoacetate metabolism regulatory protein AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC D caldi_05040 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D caldi_05070 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D caldi_14000 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D caldi_14250 cheY-2_1; response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D caldi_16470 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D caldi_24710 cheY-2_2; response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D caldi_05080 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D caldi_14290 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D caldi_24760 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] C 02035 Bacterial motility proteins [BR:cmic02035] D caldi_05040 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D caldi_05030 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D caldi_14310 cheW-2_2; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D caldi_24780 cheW-2_3; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D caldi_05060 cheD; putative chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D caldi_14300 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D caldi_24770 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D caldi_05090 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D caldi_05080 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D caldi_14290 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D caldi_24760 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D caldi_05070 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D caldi_14000 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D caldi_14250 cheY-2_1; response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D caldi_16470 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D caldi_24710 cheY-2_2; response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D caldi_14320 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D caldi_24790 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D caldi_04420 EscN/YscN/HrcN family type III secretion system ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D caldi_04560 hypothetical protein K02419 fliP; flagellar biosynthesis protein FliP D caldi_04570 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D caldi_04600 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D caldi_04590 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D caldi_04400 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D caldi_13980 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D caldi_14180 hypothetical protein K02410 fliG; flagellar motor switch protein FliG D caldi_24650 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D caldi_04530 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D caldi_04380 hypothetical protein K02408 fliE; flagellar hook-basal body complex protein FliE D caldi_04360 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D caldi_04370 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D caldi_28420 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D caldi_04480 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D caldi_28230 flagellin K02406 fliC; flagellin D caldi_04500 motility protein A K02556 motA; chemotaxis protein MotA D caldi_04510 OmpA/MotB protein K02557 motB; chemotaxis protein MotB D caldi_04490 flagellar protein FlbD K02385 flbD; flagellar protein FlbD D caldi_04620 site-determining protein K04562 flhG; flagellar biosynthesis protein FlhG D caldi_23100 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D caldi_19640 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D caldi_19630 secretion system protein K02653 pilC; type IV pilus assembly protein PilC D caldi_13410 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D caldi_10200 type II/IV secretion system-related protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D caldi_13360 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:cmic04812] D caldi_25990 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D caldi_28460 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D caldi_18400 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D caldi_18410 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D caldi_25950 site-determining protein K03609 minD; septum site-determining protein MinD D caldi_25940 cell division topological specificity factor K03608 minE; cell division topological specificity factor D caldi_29550 sporulation initiation inhibitor Soj K03496 parA; chromosome partitioning protein D caldi_29540 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:cmic04147] D caldi_26690 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D caldi_26740 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D caldi_16170 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D caldi_20150 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D caldi_26730 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D caldi_21150 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D caldi_24170 molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D caldi_25200 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D caldi_24300 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D caldi_33080 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D caldi_20740 ATPase AAA K13525 VCP; transitional endoplasmic reticulum ATPase D caldi_20850 ATPase AAA K13525 VCP; transitional endoplasmic reticulum ATPase D caldi_25090 hinT; histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D caldi_34000 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D caldi_25280 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D caldi_00830 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D caldi_18170 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D caldi_00800 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_06620 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_08900 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_09220 thlA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_11150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_14480 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_24270 mmgA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D caldi_11700 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D caldi_33310 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D caldi_23950 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D caldi_23970 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D caldi_26790 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D caldi_10990 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D caldi_12530 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D caldi_03160 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D caldi_10820 putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D caldi_29730 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D caldi_23670 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D caldi_33740 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_01390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_06490 pdhD; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_20140 bfmbC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D caldi_25730 gudB; cryptic catabolic NAD-specific glutamate dehydrogenase GudB K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D caldi_12610 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D caldi_26720 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:cmic02048] D caldi_03940 cas1-1; CRISPR-associated endonuclease Cas1 1 K15342 cas1; CRISP-associated protein Cas1 D caldi_03950 cas2-1; CRISPR-associated endoribonuclease Cas2 1 K09951 cas2; CRISPR-associated protein Cas2 D caldi_03890 CRISPR-associated helicase/endonuclease Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D caldi_03910 CRISPR-associated Csd1 family protein K19117 csd1; CRISPR-associated protein Csd1 D caldi_03920 type I-C CRISPR-associated protein Cas7/Csd2 K19118 csd2; CRISPR-associated protein Csd2 D caldi_03900 type I-C CRISPR-associated protein Cas5 K19119 cas5d; CRISPR-associated protein Cas5d D caldi_08330 restriction endonuclease subunit M K06223 dam; DNA adenine methylase [EC:2.1.1.72] D caldi_31280 methyltransferase K24451 zim; modification methylase D caldi_34960 mRNA interferase K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D caldi_14120 mRNA interferase K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D caldi_08190 hypothetical protein K21495 fitA; antitoxin FitA D caldi_18400 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D caldi_25990 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D caldi_28460 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D caldi_30520 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D caldi_26980 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D caldi_16780 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:cmic01504] D caldi_13020 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:cmic03100] D caldi_t00030 tRNA-His K14226 tRNA-His; tRNA His D caldi_t00160 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D caldi_t00580 tRNA-Met K14230 tRNA-Met; tRNA Met D caldi_t00500 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D caldi_t00450 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D caldi_t00600 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D caldi_r00010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D caldi_12770 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409] D caldi_01520 alcohol dehydrogenase K19954 adh1; alcohol dehydrogenase [EC:1.1.1.-] D caldi_02040 acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-] D caldi_06800 acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-] D caldi_02050 acoB; pyruvate dehydrogenase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] D caldi_06810 pyruvate dehydrogenase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] D caldi_05650 carbon monoxide dehydrogenase K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D caldi_16280 carbon monoxide dehydrogenase K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D caldi_05660 carbon monoxide dehydrogenase medium subunit K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3] D caldi_16300 carbon monoxide dehydrogenase K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3] D caldi_18820 molybdopterin dehydrogenase K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3] D caldi_05640 carbon-monoxide dehydrogenase large subunit K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3] D caldi_16290 carbon-monoxide dehydrogenase large subunit K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3] D caldi_18800 aldehyde dehydrogenase K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3] D caldi_20710 oxalate oxidoreductase subunit alpha K19070 oorA; oxalate oxidoreductase subunit alpha [EC:1.2.7.10] D caldi_20830 oxalate oxidoreductase subunit alpha K19070 oorA; oxalate oxidoreductase subunit alpha [EC:1.2.7.10] D caldi_20700 oxalate oxidoreductase subunit beta K19071 oorB; oxalate oxidoreductase subunit beta [EC:1.2.7.10] D caldi_20820 oxalate oxidoreductase subunit beta K19071 oorB; oxalate oxidoreductase subunit beta [EC:1.2.7.10] D caldi_20730 hypothetical protein K19072 oorD; oxalate oxidoreductase subunit delta [EC:1.2.7.10] D caldi_20840 oxalate oxidoreductase subunit delta K19072 oorD; oxalate oxidoreductase subunit delta [EC:1.2.7.10] D caldi_27040 acyl-CoA dehydrogenase K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-] D caldi_09490 hypothetical protein K04940 odh; opine dehydrogenase [EC:1.5.1.28] D caldi_12810 alcohol dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D caldi_19470 enoyl-ACP reductase II K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D caldi_19950 trxB_2; hypothetical protein K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-] D caldi_21000 hypothetical protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D caldi_21180 tpx; putative thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D caldi_24530 ahpC1; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D caldi_34790 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D caldi_20900 hypothetical protein K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57] D caldi_11410 merA; mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1] D caldi_18810 (2Fe-2S)-binding protein K24718 atcC; 3-oxo-Delta1-steroid hydratase/dehydrogenase small subunit [EC:1.17.99.11] D caldi_20480 ferredoxin--NADP reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D caldi_17640 glycosidase K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340] D caldi_17650 glycosidase K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340] D caldi_05730 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D caldi_12850 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxyl ate carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143] D caldi_16210 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D caldi_34010 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D caldi_12760 hypothetical protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220] D caldi_17360 dihydroxyacetone kinase K07030 fakA; fatty acid kinase [EC:2.7.2.18] D caldi_24610 phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D caldi_32130 disA; DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85] D caldi_27540 membrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D caldi_10460 spoIIAB; anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1] D caldi_32090 mcsB; protein-arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D caldi_00880 succinyl-CoA--D-citramalate CoA-transferase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20] D caldi_06960 phosphotriesterase K23149 E3.1.1.104; 5-phospho-D-xylono-1,4-lactonase [EC:3.1.1.104] D caldi_12590 thioesterase K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D caldi_30790 tatD; hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D caldi_17480 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D caldi_05720 ypjG; bacillithiol biosynthesis deacetylase BshB1 K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-] D caldi_02490 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D caldi_19390 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D caldi_28690 hypothetical protein K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2] D caldi_00980 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D caldi_00890 hmgL; hydroxymethylglutaryl-CoA lyase K18314 E4.1.3.46; (R)-citramalyl-CoA lyase [EC:4.1.3.46] D caldi_12840 adenine nucleotide alpha hydrolase K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D caldi_12860 TIGR00299 family protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D caldi_34500 calcium-transporting P-type ATPase, PMR1-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D caldi_34510 calcium-transporting P-type ATPase, PMR1-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D caldi_17610 ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D caldi_32790 haloacid dehalogenase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D caldi_33800 hypothetical protein K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D caldi_11470 cadmium transporter K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D caldi_22790 zinc-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D caldi_23110 sfsA; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A D caldi_07730 crh; HPr-like protein Crh K11184 chr; catabolite repression HPr-like protein D caldi_07940 lutA; lactate utilization protein A K18928 lldE; L-lactate dehydrogenase complex protein LldE D caldi_07950 iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF C 99982 Energy metabolism D caldi_25790 iron-sulfur cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins D caldi_10490 hypothetical protein K09165 K09165; dodecin C 99983 Lipid metabolism D caldi_17040 degV domain-containing protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D caldi_18310 YggS family pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D caldi_34980 cell wall hydrolase K01449 cwlJ; cell wall hydrolase C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D caldi_17530 UPF0296 protein K09777 remA; extracellular matrix regulatory protein A D caldi_29660 hypothetical protein K24648 remB; extracellular matrix regulatory protein B C 99974 Translation C 99975 Protein processing D caldi_32080 excinuclease Uvr K19411 mcsA; protein arginine kinase activator D caldi_26160 tig; trigger factor K03545 tig; trigger factor D caldi_26320 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D caldi_04260 Fis family transcriptional regulator K07391 comM; magnesium chelatase family protein D caldi_31670 OsmC-like protein K07397 yhfA; putative redox protein D caldi_25040 serine protease K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D caldi_29050 hypothetical protein K07450 K07450; putative resolvase D caldi_26000 UPF0758 protein K03630 radC; DNA repair protein RadC D caldi_00250 endonuclease III K07457 K07457; endonuclease III related protein D caldi_16840 UPF0102 protein K07460 yraN; putative endonuclease D caldi_04300 DNA processing protein DprA K04096 smf; DNA processing protein D caldi_16820 ATPase AAA K07478 ycaJ; putative ATPase D caldi_14110 IS110 family transposase K07486 K07486; transposase D caldi_18040 transposase K07496 K07496; putative transposase C 99979 Viral proteins C 99998 Others D caldi_23640 pspA; membrane protein K03969 pspA; phage shock protein A D caldi_30480 nucleoid-associated protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D caldi_10830 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D caldi_03630 multidrug ABC transporter K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D caldi_00140 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D caldi_02930 yflS; putative malate transporter YflS K03319 TC.DASS; divalent anion:Na+ symporter, DASS family C 99978 Cell growth D caldi_29570 DNA-binding protein K06346 jag; spoIIIJ-associated protein D caldi_10650 nucleoside recognition protein K06373 spmA; spore maturation protein A D caldi_10660 spore maturation protein K06374 spmB; spore maturation protein B D caldi_09610 stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA D caldi_09630 stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC D caldi_09640 stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD D caldi_11900 stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A D caldi_11090 stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC D caldi_11100 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD D caldi_11110 stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE D caldi_05130 dipicolinate synthase subunit A K06410 spoVFA; dipicolinate synthase subunit A D caldi_05140 spoVFB; dipicolinate synthase subunit B K06411 spoVFB; dipicolinate synthase subunit B D caldi_10950 stage V sporulation protein K K06413 spoVK; stage V sporulation protein K D caldi_31110 stage V sporulation protein R K06415 spoVR; stage V sporulation protein R D caldi_21370 stage V sporulation protein R K06415 spoVR; stage V sporulation protein R D caldi_10780 stage V sporulation protein S K06416 spoVS; stage V sporulation protein S D caldi_16980 stage V sporulation protein S K06416 spoVS; stage V sporulation protein S D caldi_26410 spore germination protein K06295 gerKA; spore germination protein KA D caldi_34970 hypothetical protein K06305 gerQ; spore germination protein Q C 99993 Cell motility C 99995 Signaling proteins D caldi_01810 translational GTPase TypA K06207 typA; GTP-binding protein D caldi_24980 phosphate starvation protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D caldi_31130 protein PrkA K07180 prkA; serine protein kinase D caldi_21300 protein PrkA K07180 prkA; serine protein kinase C 99992 Structural proteins C 99994 Others D caldi_01590 phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D caldi_07900 cutA; divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein D caldi_24220 molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D caldi_00560 hypothetical protein K26996 sdpI; immunity protein, SdpI family B B 09194 Poorly characterized C 99996 General function prediction only D caldi_05710 yprA; putative ATP-dependent helicase YprA K06877 K06877; DEAD/DEAH box helicase domain-containing protein D caldi_28900 ylbK; putative NTE family protein YlbK K07001 K07001; NTE family protein D caldi_25780 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D caldi_25390 membrane protein K08972 K08972; putative membrane protein D caldi_00580 hypothetical protein K08976 K08976; putative membrane protein D caldi_09520 hypothetical protein K08982 K08982; putative membrane protein C 99997 Function unknown D caldi_16610 thioether cross-link-forming SCIFF peptide maturase K06871 K06871; uncharacterized protein D caldi_24850 thioredoxin domain-containing protein K06888 K06888; uncharacterized protein D caldi_16920 KH domain-containing protein K06960 K06960; uncharacterized protein D caldi_17460 zinc metallopeptidase K06973 K06973; uncharacterized protein D caldi_15990 amidohydrolase K07045 K07045; uncharacterized protein D caldi_08430 nucleotidyltransferase K07075 K07075; uncharacterized protein D caldi_27140 C4-dicarboxylate ABC transporter substrate-binding protein K07080 K07080; uncharacterized protein D caldi_20440 C4-dicarboxylate ABC transporter substrate-binding protein K07080 K07080; uncharacterized protein D caldi_08160 sodium-dependent bicarbonate transport family permease K07086 K07086; uncharacterized protein D caldi_06680 hypothetical protein K07089 K07089; uncharacterized protein D caldi_23520 UPF0721 transmembrane protein K07090 K07090; uncharacterized protein D caldi_07510 ser/threonine protein phosphatase K07099 K07099; uncharacterized protein D caldi_14850 ATPase K07133 K07133; uncharacterized protein D caldi_29530 membrane protein K07150 K07150; uncharacterized protein D caldi_29590 putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein D caldi_31600 hypothetical protein K08999 K08999; uncharacterized protein D caldi_25070 hypothetical protein K09117 K09117; uncharacterized protein D caldi_08250 hypothetical protein K09132 K09132; uncharacterized protein D caldi_34560 hypothetical protein K09137 K09137; uncharacterized protein D caldi_22910 hypothetical protein K09386 K09386; uncharacterized protein D caldi_04930 hypothetical protein K09764 K09764; uncharacterized protein D caldi_30820 hypothetical protein K09776 K09776; uncharacterized protein D caldi_31120 sporulation protein YhbH K09786 K09786; uncharacterized protein D caldi_21400 sporulation protein YhbH K09786 K09786; uncharacterized protein D caldi_22510 hypothetical protein K09981 K09981; uncharacterized protein D caldi_25540 hypothetical protein K07584 ysxB; uncharacterized protein D caldi_00130 hypothetical protein K07220 K07220; uncharacterized protein D caldi_04900 hypothetical protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 13, 2024