+D GENES KO
#
KEGG Orthology (KO) - Clostridium pasteurianum DSM 525 = ATCC 6013
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cpat00010]
D CLPA_c31900 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLPA_c36040 pgi2; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLPA_c28800 pgi1; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLPA_c27660 pfkA1; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLPA_c26210 glpX; fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CLPA_c14760 fbp; fructose-1,6-bisphosphatase class 3 1 K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CLPA_c10910 iolJ; 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLPA_c13070 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLPA_c28180 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CLPA_c28200 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLPA_c11240 gapA1; glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLPA_c28190 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CLPA_c29200 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CLPA_c11190 fructose-2,6-bisphosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CLPA_c28170 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CLPA_c28160 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLPA_c27650 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLPA_c22930 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CLPA_c19670 pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CLPA_c19680 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLPA_c05140 nifJ1; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLPA_c17490 nifJ2; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLPA_c17500 nifJ3; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLPA_c17540 ldh1; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLPA_c27630 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLPA_c28930 adhE4; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c05730 adhE1; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c15160 adhE2; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c15660 adhE3; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c23760 aldA; putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLPA_c16930 pgcA1; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLPA_c14110 gapN; NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D CLPA_c31290 abgA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CLPA_c20200 crr2; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLPA_c18920 ptsG2; PTS system glucose-specific EIICBA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLPA_c01230 crr1; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLPA_c32550 PTS system glucose subfamily transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLPA_c17380 ptsG1; PTS system glucose-specific EIICBA component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:cpat00020]
D CLPA_c14670 leuA2; 2-isopropylmalate synthase 2 K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3]
D CLPA_c10060 hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CLPA_c14680 leuB1; 3-isopropylmalate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D CLPA_c19680 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLPA_c36350 putative fumarate hydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CLPA_c36340 fumB; fumarate hydratase class I, anaerobic K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CLPA_c35860 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CLPA_c19670 pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CLPA_c05140 nifJ1; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLPA_c17490 nifJ2; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLPA_c17500 nifJ3; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:cpat00030]
D CLPA_c36040 pgi2; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLPA_c28800 pgi1; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLPA_c20970 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CLPA_c35820 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLPA_c27870 putative transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLPA_c27880 putative transketolase N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLPA_c08240 putative transketolase N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLPA_c08250 putative transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLPA_c08260 tal; putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CLPA_c28020 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D CLPA_c32120 rpiB2; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CLPA_c02710 rpiB1; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CLPA_c19270 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D CLPA_c16930 pgcA1; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLPA_c11710 prs1; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CLPA_c37510 prs2; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CLPA_c05950 putative 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CLPA_c40140 kdgA; KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CLPA_c14110 gapN; NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D CLPA_c38400 dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D CLPA_c40130 sugar kinase, ribokinase family K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D CLPA_c10910 iolJ; 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLPA_c13070 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLPA_c26210 glpX; fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CLPA_c14760 fbp; fructose-1,6-bisphosphatase class 3 1 K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CLPA_c27660 pfkA1; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:cpat00040]
D CLPA_c27010 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D CLPA_c27060 uxuA2; mannonate dehydratase 2 K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D CLPA_c06510 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CLPA_c16950 gtaB2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLPA_c07960 gtaB1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLPA_c27020 dlgD; 2,3-diketo-L-gulonate reductase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130]
D CLPA_c08230 ulaE; L-ribulose-5-phosphate 3-epimerase UlaE K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D CLPA_c08220 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CLPA_c20970 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CLPA_c29860 xylB; xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D CLPA_c18930 tdh; putative L-threonine 3-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
C 00051 Fructose and mannose metabolism [PATH:cpat00051]
D CLPA_c32860 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CLPA_c14550 manA; mannose-6-phosphate isomerase ManA K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CLPA_c01790 mpg1; putative mannose-1-phosphate guanyltransferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D CLPA_c35920 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLPA_c06520 algA; alginate biosynthesis protein AlgA K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLPA_c27660 pfkA1; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLPA_c26210 glpX; fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CLPA_c14760 fbp; fructose-1,6-bisphosphatase class 3 1 K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CLPA_c28810 mtlD; mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D CLPA_c29010 sorD2; sorbitol-6-phosphate 2-dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D CLPA_c28790 sorD1; sorbitol-6-phosphate 2-dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D CLPA_c28960 sorE; L-sorbose 1-phosphate reductase K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-]
D CLPA_c39920 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D CLPA_c18930 tdh; putative L-threonine 3-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CLPA_c10910 iolJ; 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLPA_c13070 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLPA_c28180 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CLPA_c12160 dhaK; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D CLPA_c07400 fructan beta-fructosidase K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D CLPA_c32120 rpiB2; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CLPA_c02710 rpiB1; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CLPA_c39140 fruA2; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CLPA_c39910 fruA3; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CLPA_c36260 manX2; PTS system mannose-specific EIIAB component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CLPA_c36240 manX1; PTS system mannose-specific EIIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D CLPA_c31870 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC K02795 manY; mannose PTS system EIIC component
D CLPA_c36230 sorA2; sorbose permease IIC component K02795 manY; mannose PTS system EIIC component
D CLPA_c31860 manZ1; mannose permease IID component K02796 manZ; mannose PTS system EIID component
D CLPA_c36220 manZ2; mannose permease IID component K02796 manZ; mannose PTS system EIID component
D CLPA_c28820 mtlF; mannitol-specific phosphotransferase enzyme IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D CLPA_c28840 mtlA; PTS system mannitol-specific EIICB component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D CLPA_c28750 PTS system, glucitol/sorbitol-specific, IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D CLPA_c28760 srlE; glucitol/sorbitol-specific phosphotransferase enzyme IIB component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CLPA_c28770 srlA; glucitol/sorbitol permease IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D CLPA_c29000 PTS system, mannose/fructose/sorbose family, IIA component K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206]
D CLPA_c28990 sorB; sorbose-specific phosphotransferase enzyme IIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206]
D CLPA_c28980 sorA1; sorbose permease IIC component K02814 sorA; sorbose PTS system EIIC component
D CLPA_c28970 sorM; sorbose permease IID component K02815 sorM; sorbose PTS system EIID component
C 00052 Galactose metabolism [PATH:cpat00052]
D CLPA_c05680 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CLPA_c05650 galT1; galactose-1-phosphate uridylyltransferase 1 K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CLPA_c35150 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CLPA_c06000 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLPA_c32880 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLPA_c16950 gtaB2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLPA_c07960 gtaB1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLPA_c16930 pgcA1; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLPA_c31900 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLPA_c06590 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CLPA_c05510 agaR; alpha-galactosidase 1 K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D CLPA_c05960 PTS system galactitol specific transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D CLPA_c05970 PTS system, lactose/cellobiose specific IIB subunit K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D CLPA_c05980 galactitol permease IIC component K02775 gatC; galactitol PTS system EIIC component
D CLPA_c27660 pfkA1; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLPA_c05990 dgoD; D-galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D CLPA_c29820 sacA1; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CLPA_c34220 sacA2; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CLPA_c31640 malL3; oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CLPA_c31690 alpha-glucosidase 2 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CLPA_c31820 alpha-glucosidase 2 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CLPA_c18070 malL5; oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D CLPA_c31850 malL2; oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D CLPA_c31920 malL4; oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D CLPA_c03550 malL1; oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism [PATH:cpat00053]
D CLPA_c06510 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CLPA_c08170 PTS system IIA component, L-Asc family K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CLPA_c08200 PTS system IIB component, L-Asc family K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CLPA_c08180 ulaA; ascorbate-specific permease IIC component UlaA K03475 ulaA; ascorbate PTS system EIIC component
D CLPA_c08160 ulaG; putative L-ascorbate-6-phosphate lactonase UlaG K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D CLPA_c08230 ulaE; L-ribulose-5-phosphate 3-epimerase UlaE K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D CLPA_c08220 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D CLPA_c27020 dlgD; 2,3-diketo-L-gulonate reductase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130]
D CLPA_c23760 aldA; putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:cpat00500]
D CLPA_c29830 scrA; PTS system sucrose-specific EIIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CLPA_c29820 sacA1; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CLPA_c34220 sacA2; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D CLPA_c31640 malL3; oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CLPA_c31690 alpha-glucosidase 2 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CLPA_c31820 alpha-glucosidase 2 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CLPA_c03870 sacB1; levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D CLPA_c05690 sacB2; levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D CLPA_c06780 sacB3; levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D CLPA_c10840 lsc; levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D CLPA_c03880 levB1; levanbiose-producing levanase K01212 sacC; levanase [EC:3.2.1.65]
D CLPA_c04120 levB2; levanbiose-producing levanase K01212 sacC; levanase [EC:3.2.1.65]
D CLPA_c31660 sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D CLPA_c16950 gtaB2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLPA_c07960 gtaB1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLPA_c31290 abgA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CLPA_c07770 nucleotidyl transferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D CLPA_c21720 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CLPA_c21730 glgD; glycogen biosynthesis protein GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CLPA_c21740 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D CLPA_c16160 glycosyltransferase K16150 K16150; glycogen synthase [EC:2.4.1.11]
D CLPA_c16350 1,4-alpha-glucan branching enzyme K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D CLPA_c21610 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CLPA_c13310 amyX; pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D CLPA_c20180 maltogenic alpha-amylase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D CLPA_c18070 malL5; oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D CLPA_c31850 malL2; oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D CLPA_c31920 malL4; oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D CLPA_c03550 malL1; oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D CLPA_c35350 hypothetical protein K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D CLPA_c20200 crr2; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLPA_c18920 ptsG2; PTS system glucose-specific EIICBA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLPA_c01230 crr1; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLPA_c32550 PTS system glucose subfamily transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLPA_c18890 aglA; PTS system alpha-glucoside-specific EIICB component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D CLPA_c32010 malP; PTS system maltose-specific EIICB component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D CLPA_c18900 malH; maltose-6'-phosphate glucosidase MalH K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122]
D CLPA_c31990 pagL2; 6-phospho-alpha-glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122]
D CLPA_c03700 treP; PTS system trehalose-specific EIIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D CLPA_c03690 treA; trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D CLPA_c16930 pgcA1; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLPA_c31900 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLPA_c36040 pgi2; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLPA_c28800 pgi1; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLPA_c32860 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cpat00520]
D CLPA_c20200 crr2; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLPA_c18920 ptsG2; PTS system glucose-specific EIICBA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLPA_c01230 crr1; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLPA_c32550 PTS system glucose subfamily transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLPA_c03410 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D CLPA_c32860 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CLPA_c28920 glmS; glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CLPA_c36050 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CLPA_c37520 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CLPA_c39260 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLPA_c35600 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLPA_c27740 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CLPA_c35720 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CLPA_c17380 ptsG1; PTS system glucose-specific EIICBA component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLPA_c31900 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLPA_c16930 pgcA1; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLPA_c16950 gtaB2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLPA_c07960 gtaB1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLPA_c06510 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CLPA_c05680 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CLPA_c05650 galT1; galactose-1-phosphate uridylyltransferase 1 K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CLPA_c35150 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D CLPA_c06000 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLPA_c32880 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLPA_c06590 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CLPA_c36260 manX2; PTS system mannose-specific EIIAB component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CLPA_c36240 manX1; PTS system mannose-specific EIIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D CLPA_c31870 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC K02795 manY; mannose PTS system EIIC component
D CLPA_c36230 sorA2; sorbose permease IIC component K02795 manY; mannose PTS system EIIC component
D CLPA_c31860 manZ1; mannose permease IID component K02796 manZ; mannose PTS system EIID component
D CLPA_c36220 manZ2; mannose permease IID component K02796 manZ; mannose PTS system EIID component
D CLPA_c36040 pgi2; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLPA_c28800 pgi1; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLPA_c14550 manA; mannose-6-phosphate isomerase ManA K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CLPA_c01790 mpg1; putative mannose-1-phosphate guanyltransferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D CLPA_c35920 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLPA_c06520 algA; alginate biosynthesis protein AlgA K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLPA_c07770 nucleotidyl transferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D CLPA_c07790 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D CLPA_c21720 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CLPA_c21730 glgD; glycogen biosynthesis protein GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:cpat00620]
D CLPA_c05140 nifJ1; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLPA_c17490 nifJ2; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLPA_c17500 nifJ3; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLPA_c19670 pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CLPA_c19680 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLPA_c00930 pfl; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CLPA_c28930 adhE4; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c05730 adhE1; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c15160 adhE2; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c15660 adhE3; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c20820 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CLPA_c20830 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLPA_c27650 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLPA_c39540 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CLPA_c39580 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CLPA_c39560 accC1; biotin carboxylase 1 K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CLPA_c39550 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CLPA_c21980 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CLPA_c23760 aldA; putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLPA_c39970 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D CLPA_c10990 ydiF; acetate CoA-transferase YdiF K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D CLPA_c29580 glcD2; glycolate oxidase subunit GlcD K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436]
D CLPA_c14970 glcD1; glycolate oxidase subunit GlcD K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436]
D CLPA_c14960 etfA1; electron transfer flavoprotein subunit alpha K26114 lctC; lactate dehydrogenase (NAD+,ferredoxin) subunit LctC
D CLPA_c14950 etfB1; electron transfer flavoprotein subunit beta K26115 lctB; lactate dehydrogenase (NAD+,ferredoxin) subunit LctB
D CLPA_c17540 ldh1; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLPA_c27630 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLPA_c10210 aldo/keto reductase family oxidoreductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D CLPA_c26540 lactoylglutathione lyase-like lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CLPA_c22190 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CLPA_c14440 hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D CLPA_c39300 hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D CLPA_c38400 dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D CLPA_c25100 malS; putative NAD-dependent malic enzyme 3 K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CLPA_c35860 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CLPA_c36350 putative fumarate hydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CLPA_c36340 fumB; fumarate hydratase class I, anaerobic K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CLPA_c22930 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CLPA_c35710 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c08620 thlA1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c32300 leuA1; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D CLPA_c14420 nifVo; homocitrate synthase, omega subunit K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
D CLPA_c14430 nifVa; homocitrate synthase subunit alpha K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cpat00630]
D CLPA_c10060 hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CLPA_c35710 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c08620 thlA1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c39950 croR; 3-hydroxybutyryl-CoA dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D CLPA_c38400 dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D CLPA_c21860 5'-nucleotidase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CLPA_c03160 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CLPA_c38000 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLPA_c22130 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CLPA_c19680 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLPA_c29620 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CLPA_c05950 putative 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CLPA_c40140 kdgA; KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:cpat00640]
D CLPA_c39970 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D CLPA_c10990 ydiF; acetate CoA-transferase YdiF K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D CLPA_c20820 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CLPA_c20830 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLPA_c19680 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLPA_c00930 pfl; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CLPA_c11000 bcd2; acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLPA_c28620 bcd3; acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLPA_c39540 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CLPA_c39580 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CLPA_c39560 accC1; biotin carboxylase 1 K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CLPA_c39550 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CLPA_c11830 gabT1; putative 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CLPA_c39030 puuE; 4-aminobutyrate aminotransferase PuuE K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CLPA_c11050 hypothetical protein K25571 pydD; beta-alanine---2-oxoglutarate transaminase [EC:2.6.1.120]
D CLPA_c17540 ldh1; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLPA_c27630 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLPA_c14450 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D CLPA_c12150 dhaD1; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D CLPA_c38340 dhaD2; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D CLPA_c10210 aldo/keto reductase family oxidoreductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D CLPA_c22740 dhaT2; 1,3-propanediol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202]
C 00650 Butanoate metabolism [PATH:cpat00650]
D CLPA_c35710 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c08620 thlA1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c11840 hbd1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CLPA_c28590 hbd2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CLPA_c10980 crt1; 3-hydroxybutyryl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D CLPA_c28630 crt2; 3-hydroxybutyryl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D CLPA_c11000 bcd2; acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLPA_c28620 bcd3; acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLPA_c16150 ccel; putative reductase Ccel K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D CLPA_c08850 atoD; acetate CoA-transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CLPA_c15170 ctfA; butyrate--acetoacetate CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CLPA_c08840 ctfB1; butyrate--acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CLPA_c15180 ctfB2; butyrate--acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CLPA_c36080 buk; butyrate kinase 1 K00929 buk; butyrate kinase [EC:2.7.2.7]
D CLPA_c36090 ptb; phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D CLPA_c28930 adhE4; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c05730 adhE1; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c15160 adhE2; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c15660 adhE3; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c04370 bdhA1; NADH-dependent butanol dehydrogenase A K00100 bdhAB; butanol dehydrogenase [EC:1.1.1.-]
D CLPA_c39950 croR; 3-hydroxybutyryl-CoA dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D CLPA_c11830 gabT1; putative 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CLPA_c39030 puuE; 4-aminobutyrate aminotransferase PuuE K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CLPA_c06290 NAD-dependent 4-hydroxybutyrate dehydrogenase K18120 4hbD; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61]
D CLPA_c39010 NAD-dependent 4-hydroxybutyrate dehydrogenase K18120 4hbD; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61]
D CLPA_c00930 pfl; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CLPA_c05140 nifJ1; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLPA_c17490 nifJ2; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLPA_c17500 nifJ3; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLPA_c15190 adc; putative acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4]
D CLPA_c06280 alsS; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLPA_c22710 ilvB1; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLPA_c29390 ilvB2; acetolactate synthase isozyme 1 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLPA_c29380 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CLPA_c06790 butA; diacetyl reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
D CLPA_c30100 bacC; bacilysin biosynthesis oxidoreductase BacC K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:cpat00660]
D CLPA_c06280 alsS; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLPA_c22710 ilvB1; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLPA_c29390 ilvB2; acetolactate synthase isozyme 1 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLPA_c29380 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CLPA_c22690 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CLPA_c22680 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CLPA_c22670 leuB2; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cpat00562]
D CLPA_c15500 putative phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CLPA_c10950 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D CLPA_c04190 oxidoreductase K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D CLPA_c10960 iolE; inosose dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D CLPA_c10940 myo-inositol 2-dehydrogenase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D CLPA_c10930 iolB; 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D CLPA_c10920 iolC; 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D CLPA_c28180 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cpat00190]
D CLPA_c25380 nuoA; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D CLPA_c25370 nuoB; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D CLPA_c25360 nuoC; NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D CLPA_c25350 nuoD; NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D CLPA_c34350 NADH:ubiquinone oxidoreductase 24 kD subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D CLPA_c33960 iron hydrogenase 1 K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D CLPA_c25340 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D CLPA_c25330 nuoI; NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D CLPA_c25300 ndhF; NAD(P)H-quinone oxidoreductase chain 5 K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D CLPA_c25290 ndhD1; NAD(P)H-quinone oxidoreductase chain 4 1 K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D CLPA_c25280 nuoN; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D CLPA_c25310 nuoK; NADH-quinone oxidoreductase subunit K K05576 ndhE; NAD(P)H-quinone oxidoreductase subunit 4L [EC:7.1.1.2]
D CLPA_c34370 nuoG; NADH-quinone oxidoreductase subunit G 2 K05588 hoxU; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D CLPA_c35650 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CLPA_c35630 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CLPA_c35640 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CLPA_c35660 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CLPA_c35620 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CLPA_c35690 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CLPA_c35670 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CLPA_c35680 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CLPA_c18390 cobalt-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D CLPA_c15780 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:cpat00710]
D CLPA_c28190 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CLPA_c28200 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLPA_c11240 gapA1; glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLPA_c10910 iolJ; 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLPA_c13070 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLPA_c26210 glpX; fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CLPA_c14760 fbp; fructose-1,6-bisphosphatase class 3 1 K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CLPA_c35820 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLPA_c27870 putative transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLPA_c27880 putative transketolase N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLPA_c08240 putative transketolase N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLPA_c08250 putative transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLPA_c28020 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D CLPA_c32120 rpiB2; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CLPA_c02710 rpiB1; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CLPA_c28180 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CLPA_c20970 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CLPA_c08260 tal; putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CLPA_c22930 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:cpat00720]
D CLPA_c05140 nifJ1; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLPA_c17490 nifJ2; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLPA_c17500 nifJ3; pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLPA_c22930 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CLPA_c35860 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CLPA_c36350 putative fumarate hydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CLPA_c36340 fumB; fumarate hydratase class I, anaerobic K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CLPA_c35710 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c08620 thlA1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c10060 hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CLPA_c39540 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CLPA_c39580 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CLPA_c39560 accC1; biotin carboxylase 1 K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CLPA_c39550 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CLPA_c10260 fdhF; formate dehydrogenase H K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D CLPA_c10290 4Fe-4S ferredoxin K25124 hycB; FeS-containing electron transfer protein
D CLPA_c10300 hydN; electron transport protein HydN K25124 hycB; FeS-containing electron transfer protein
D CLPA_c37250 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CLPA_c19070 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CLPA_c17200 methenyl tetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D CLPA_c05080 cooS; carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CLPA_c34390 cooS1; carbon monoxide dehydrogenase 1 K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CLPA_c34380 cooF; iron-sulfur protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CLPA_c20830 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLPA_c20820 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:cpat00680]
D CLPA_c10260 fdhF; formate dehydrogenase H K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D CLPA_c10290 4Fe-4S ferredoxin K25124 hycB; FeS-containing electron transfer protein
D CLPA_c10300 hydN; electron transport protein HydN K25124 hycB; FeS-containing electron transfer protein
D CLPA_c05080 cooS; carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CLPA_c34390 cooS1; carbon monoxide dehydrogenase 1 K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CLPA_c34380 cooF; iron-sulfur protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CLPA_c22130 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CLPA_c28160 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLPA_c12160 dhaK; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D CLPA_c10910 iolJ; 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLPA_c13070 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLPA_c26210 glpX; fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CLPA_c14760 fbp; fructose-1,6-bisphosphatase class 3 1 K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CLPA_c27660 pfkA1; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLPA_c20820 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CLPA_c20830 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLPA_c29200 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CLPA_c11190 fructose-2,6-bisphosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CLPA_c28170 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CLPA_c31550 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLPA_c00180 hydroxypyruvate reductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLPA_c25090 pspA; phosphoserine phosphatase 1 K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D CLPA_c37880 comB; putative 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
D CLPA_c31190 mdh; malate dehydrogenase K05884 comC; L-2-hydroxycarboxylate dehydrogenase (NAD+) [EC:1.1.1.337]
C 00910 Nitrogen metabolism [PATH:cpat00910]
D CLPA_c03220 sir1; sulfite reductase K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1]
D CLPA_c23850 nifD8; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c10420 nifE1; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c10440 nifE2; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c19390 nifE6; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c02970 nifD1; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c33480 nifD5; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c33540 nifD4; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c33640 nifE8; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c33680 nifE9; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c33890 nifD6; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c38180 anfD; nitrogenase iron-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c21960 nifE7; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c14360 nifD2; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c38960 nifD7; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c15220 nifD3; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c10430 nitrogenase molybdenum-iron protein subunit beta K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c10450 nifK5; nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c21950 hypothetical protein K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c22050 nitrogenase molybdenum-iron protein, alpha and beta subunit K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c02980 anfK1; nitrogenase iron-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c33880 nitrogenase molybdenum-iron protein, alpha and beta subunit K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c38160 anfK2; nitrogenase iron-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c14370 nifK1; nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c15230 nitrogenase molybdenum-iron protein, alpha and beta subunit K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c38950 hypothetical protein K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c23840 nitrogenase molybdenum-iron protein, alpha and beta subunit K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c19400 nifK2; nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c33530 nifK4; nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c33630 hypothetical protein K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c33670 nitrogenase molybdenum-iron protein, alpha and beta subunit K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c14350 nifH4; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLPA_c38200 nifH6; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLPA_c14250 nifH2; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLPA_c14340 nifH3; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLPA_c11150 nifH1; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLPA_c33550 nifH5; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLPA_c38170 anfG; nitrogenase iron-iron protein delta chain K00531 anfG; nitrogenase delta subunit [EC:1.18.6.1]
D CLPA_c14260 vnfD; nitrogenase vanadium-iron protein alpha chain K22896 vnfD; vanadium-dependent nitrogenase alpha chain [EC:1.18.6.2]
D CLPA_c14280 vnfK; nitrogenase vanadium-iron protein beta chain K22897 vnfK; vanadium-dependent nitrogenase beta chain [EC:1.18.6.2]
D CLPA_c14270 nitrogenase, subunit delta K22898 vnfG; vanadium nitrogenase delta subunit [EC:1.18.6.2]
D CLPA_c35890 hcp3; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D CLPA_c03840 hcp1; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D CLPA_c27450 hcp2; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D CLPA_c39640 2-nitropropane dioxygenase family oxidoreductase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CLPA_c38000 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLPA_c21570 gltB; ferredoxin-dependent glutamate synthase 1 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CLPA_c28570 sudA; sulfide dehydrogenase subunit alpha K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLPA_c21560 gltD; glutamate synthase small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLPA_c26340 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cpat00920]
D CLPA_c04330 sbp; sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D CLPA_c04340 cysU; sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D CLPA_c04350 cysW; sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D CLPA_c04360 cysA; sulfate/thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D CLPA_c31210 ssuA; putative aliphatic sulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CLPA_c35240 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein
D CLPA_c07000 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component K15553 ssuA; sulfonate transport system substrate-binding protein
D CLPA_c31240 ssuC2; putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein
D CLPA_c35220 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein
D CLPA_c07010 nrtB; nitrate transport permease protein NrtB K15554 ssuC; sulfonate transport system permease protein
D CLPA_c31230 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CLPA_c07020 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CLPA_c35230 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CLPA_c35200 cysNC; bifunctional enzyme CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D CLPA_c35210 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CLPA_c35270 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D CLPA_c20350 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D CLPA_c35260 adenylylsulfate reductase subunit alpha K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]
D CLPA_c35250 ferredoxin K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2]
D CLPA_c35290 sir2; sulfite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D CLPA_c25540 hypothetical protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D CLPA_c13250 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CLPA_c16200 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLPA_c33690 cysK3; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLPA_c33820 cysK2; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLPA_c32580 mccA; O-acetylserine dependent cystathionine beta-synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLPA_c26990 metA1; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CLPA_c35990 metA2; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CLPA_c26360 metC4; cystathionine beta-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cpat00061]
D CLPA_c39540 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CLPA_c39580 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CLPA_c39560 accC1; biotin carboxylase 1 K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CLPA_c39550 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CLPA_c20780 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D CLPA_c39610 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CLPA_c39630 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CLPA_c39590 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CLPA_c09330 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLPA_c26590 fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLPA_c39600 fabG4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLPA_c39570 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CLPA_c39620 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CLPA_c16150 ccel; putative reductase Ccel K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cpat00071]
D CLPA_c35710 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c08620 thlA1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c11000 bcd2; acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLPA_c28620 bcd3; acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLPA_c28930 adhE4; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c05730 adhE1; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c15160 adhE2; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c15660 adhE3; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c23760 aldA; putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cpat00561]
D CLPA_c29620 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CLPA_c23760 aldA; putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLPA_c12160 dhaK; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D CLPA_c12150 dhaD1; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D CLPA_c38340 dhaD2; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D CLPA_c20790 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CLPA_c14660 plsC; putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLPA_c13270 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLPA_c22990 diacylglycerol kinase/PAP2 family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CLPA_c02520 ugtP1; processive diacylglycerol beta-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CLPA_c32970 ugtP2; processive diacylglycerol beta-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CLPA_c22640 ltaS2; lipoteichoic acid synthase 2 K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D CLPA_c05510 agaR; alpha-galactosidase 1 K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D CLPA_c22810 dhaB; glycerol dehydratase large subunit K06120 dhaB; glycerol dehydratase large subunit [EC:4.2.1.30]
D CLPA_c22800 pduD; propanediol dehydratase medium subunit K06121 dhbC; glycerol dehydratase medium subunit [EC:4.2.1.30]
D CLPA_c22790 pduE; propanediol dehydratase small subunit K06122 dhbE; glycerol dehydratase small subunit [EC:4.2.1.30]
D CLPA_c22740 dhaT2; 1,3-propanediol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202]
C 00564 Glycerophospholipid metabolism [PATH:cpat00564]
D CLPA_c21140 gpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CLPA_c23700 putative dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CLPA_c14660 plsC; putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLPA_c13270 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLPA_c22990 diacylglycerol kinase/PAP2 family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CLPA_c15500 putative phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CLPA_c06210 GLPQ like phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CLPA_c05490 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CLPA_c29940 eutA; ethanolamine utilization protein EutA K04019 eutA; ethanolamine utilization protein EutA
D CLPA_c29920 eutB; ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D CLPA_c29910 eutC; ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D CLPA_c20460 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CLPA_c13150 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase PssA K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CLPA_c00290 psd; phosphatidylserine decarboxylase proenzyme Psd K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CLPA_c08470 phosphatidylglycerophosphate synthase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CLPA_c20260 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CLPA_c29160 clsA; major cardiolipin synthase ClsA K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D CLPA_c22420 phospholipase D/transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D CLPA_c13730 phosphatidylglycerophosphate synthase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D CLPA_c35790 egsA; glycerol-1-phosphate dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
C 00565 Ether lipid metabolism
D CLPA_c15500 putative phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:cpat00600]
D CLPA_c05510 agaR; alpha-galactosidase 1 K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D CLPA_c19600 esterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cpat00230]
D CLPA_c19230 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CLPA_c10130 nudix (MutT) family hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CLPA_c19270 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D CLPA_c16930 pgcA1; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLPA_c11710 prs1; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CLPA_c37510 prs2; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CLPA_c24760 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CLPA_c24720 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CLPA_c24740 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CLPA_c24790 purL; phosphoribosylformylglycinamidine synthase 2 K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D CLPA_c24750 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CLPA_c24780 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CLPA_c24770 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CLPA_c20170 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CLPA_c24730 purH2; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CLPA_c03710 purH1; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CLPA_c22210 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CLPA_c32570 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CLPA_c19280 punA1; purine nucleoside phosphorylase 1 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CLPA_c19290 punA2; purine nucleoside phosphorylase 1 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CLPA_c29640 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D CLPA_c21280 laccase domain protein CA K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CLPA_c37270 hpt; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CLPA_c03190 guaB1; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CLPA_c28510 guaB2; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CLPA_c15110 ndkA1; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CLPA_c13460 Non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CLPA_c26930 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D CLPA_c03340 cutB; glyceraldehyde dehydrogenase medium chain K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4]
D CLPA_c28500 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CLPA_c11110 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D CLPA_c26040 hypothetical protein K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CLPA_c21090 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CLPA_c16060 nrdJ; vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CLPA_c01890 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CLPA_c22910 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1]
D CLPA_c22200 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CLPA_c15760 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CLPA_c15770 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CLPA_c30380 hypothetical protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D CLPA_c12830 RelA/SpoT domain-containing protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D CLPA_c13030 cyaB; putative adenylyl cyclase CyaB K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D CLPA_c39830 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CLPA_c33130 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D CLPA_c39360 5'-nucleotidase domain-containing protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D CLPA_c36540 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CLPA_c35200 cysNC; bifunctional enzyme CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D CLPA_c35270 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D CLPA_c35210 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:cpat00240]
D CLPA_c26820 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLPA_c26830 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CLPA_c26910 pyrB2; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CLPA_c26900 pyrI; aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D CLPA_c26890 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CLPA_c26860 pyrD2; dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D CLPA_c26870 pyrK; dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D CLPA_c26850 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CLPA_c26880 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CLPA_c20490 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CLPA_c15110 ndkA1; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CLPA_c23630 Maf-like protein CLJ K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CLPA_c02570 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CLPA_c19460 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CLPA_c32570 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CLPA_c29640 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D CLPA_c02720 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CLPA_c18710 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CLPA_c39360 5'-nucleotidase domain-containing protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D CLPA_c19300 pdp; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D CLPA_c22980 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CLPA_c09310 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CLPA_c01890 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CLPA_c04540 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D CLPA_c16060 nrdJ; vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CLPA_c35740 cytidine/deoxycytidylate deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CLPA_c02630 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D CLPA_c36960 thyX; thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CLPA_c11100 preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D CLPA_c03300 pyrD1; dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D CLPA_c11080 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLPA_c03280 hyuA; D-phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLPA_c11060 amaB; N-carbamoyl-L-amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cpat00250]
D CLPA_c20210 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLPA_c29510 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLPA_c02330 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CLPA_c31420 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D CLPA_c25220 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CLPA_c38060 asnO; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CLPA_c40010 ansB2; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D CLPA_c21630 ansB1; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D CLPA_c14690 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CLPA_c14700 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CLPA_c39830 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CLPA_c20170 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CLPA_c26910 pyrB2; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CLPA_c26900 pyrI; aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D CLPA_c11830 gabT1; putative 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CLPA_c39030 puuE; 4-aminobutyrate aminotransferase PuuE K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CLPA_c21570 gltB; ferredoxin-dependent glutamate synthase 1 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CLPA_c28570 sudA; sulfide dehydrogenase subunit alpha K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLPA_c21560 gltD; glutamate synthase small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLPA_c38000 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLPA_c26820 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLPA_c26830 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CLPA_c28920 glmS; glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CLPA_c24760 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cpat00260]
D CLPA_c01040 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLPA_c32920 dapG; aspartokinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLPA_c12320 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLPA_c39050 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLPA_c14070 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLPA_c14080 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CLPA_c31220 thrC2; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CLPA_c14060 thrC1; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CLPA_c22130 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CLPA_c38400 dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D CLPA_c29620 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CLPA_c29200 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CLPA_c11190 fructose-2,6-bisphosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CLPA_c28170 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CLPA_c31550 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLPA_c00180 hydroxypyruvate reductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLPA_c25090 pspA; phosphoserine phosphatase 1 K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D CLPA_c19680 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLPA_c13150 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase PssA K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CLPA_c08290 type 11 methyltransferase K18896 gsmt; glycine/sarcosine N-methyltransferase [EC:2.1.1.156]
D CLPA_c13120 sdhB; L-serine dehydratase, beta chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLPA_c13130 sdhA; L-serine dehydratase, alpha chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLPA_c26370 tdcB; L-threonine dehydratase catabolic TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CLPA_c14190 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CLPA_c14180 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:cpat00270]
D CLPA_c13250 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CLPA_c16200 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLPA_c33690 cysK3; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLPA_c33820 cysK2; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLPA_c32580 mccA; O-acetylserine dependent cystathionine beta-synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLPA_c26350 metC3; cystathionine beta-lyase MetC K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLPA_c32590 mccB; cystathionine gamma-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLPA_c13060 patB; cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLPA_c25080 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CLPA_c35460 metK2; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CLPA_c33460 metK1; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CLPA_c32930 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CLPA_c17230 speE; polyamine aminopropyl transferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CLPA_c18670 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CLPA_c21280 laccase domain protein CA K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CLPA_c35800 phosphoserine phosphatase family protein K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87]
D CLPA_c05910 bepIM; modification methylase BepI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CLPA_c23670 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CLPA_c01040 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLPA_c32920 dapG; aspartokinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLPA_c12320 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLPA_c39050 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLPA_c14070 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLPA_c26990 metA1; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CLPA_c35990 metA2; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CLPA_c26360 metC4; cystathionine beta-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D CLPA_c26980 mdeA1; methionine gamma-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CLPA_c35280 mdeA4; methionine gamma-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CLPA_c33520 mdeA2; methionine gamma-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CLPA_c33660 mdeA3; methionine gamma-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CLPA_c39290 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLPA_c17530 putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLPA_c20210 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLPA_c29510 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLPA_c17540 ldh1; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLPA_c27630 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLPA_c13120 sdhB; L-serine dehydratase, beta chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLPA_c13130 sdhA; L-serine dehydratase, alpha chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLPA_c31550 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLPA_c00180 hydroxypyruvate reductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:cpat00280]
D CLPA_c39290 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLPA_c17530 putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLPA_c19680 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLPA_c11000 bcd2; acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLPA_c28620 bcd3; acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLPA_c21940 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D CLPA_c23760 aldA; putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLPA_c11830 gabT1; putative 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CLPA_c39030 puuE; 4-aminobutyrate aminotransferase PuuE K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CLPA_c35710 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c08620 thlA1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cpat00290]
D CLPA_c26370 tdcB; L-threonine dehydratase catabolic TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CLPA_c22690 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CLPA_c22680 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CLPA_c22670 leuB2; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CLPA_c06280 alsS; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLPA_c22710 ilvB1; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLPA_c29390 ilvB2; acetolactate synthase isozyme 1 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLPA_c29380 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CLPA_c22700 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CLPA_c40100 ilvD3; dihydroxy-acid dehydratase 2 K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CLPA_c22660 ilvD2; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CLPA_c04320 ilvD1; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CLPA_c39290 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLPA_c17530 putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLPA_c32300 leuA1; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cpat00300]
D CLPA_c14070 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLPA_c01040 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLPA_c32920 dapG; aspartokinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLPA_c12320 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLPA_c39050 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLPA_c16590 dapA1; 4-hydroxy-tetrahydrodipicolinate synthase 1 K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLPA_c08810 dapA2; 4-hydroxy-tetrahydrodipicolinate synthase 2 K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLPA_c16580 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CLPA_c16560 dapH; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CLPA_c16500 argD2; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CLPA_c04980 argD1; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CLPA_c09540 pepV1; M20 family peptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CLPA_c32280 pepV2; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CLPA_c18730 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CLPA_c21120 dapL2; LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CLPA_c12330 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CLPA_c03570 aromatic-amino-acid aminotransferase 1 K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D CLPA_c18550 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 1 K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CLPA_c18560 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cpat00310]
D CLPA_c19680 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLPA_c35710 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c08620 thlA1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c11830 gabT1; putative 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CLPA_c39030 puuE; 4-aminobutyrate aminotransferase PuuE K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CLPA_c31480 kamA; L-lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D CLPA_c31450 kamD; D-lysine 5,6-aminomutase alpha subunit K01844 kamD; beta-lysine 5,6-aminomutase alpha subunit [EC:5.4.3.3]
D CLPA_c31440 kamE; D-lysine 5,6-aminomutase beta subunit K18011 kamE; beta-lysine 5,6-aminomutase beta subunit [EC:5.4.3.3]
D CLPA_c31490 kdd; L-erythro-3,5-diaminohexanoate dehydrogenase K18012 kdd; L-erythro-3,5-diaminohexanoate dehydrogenase [EC:1.4.1.11]
D CLPA_c31500 kce; 3-keto-5-aminohexanoate cleavage enzyme K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D CLPA_c31510 kal; 3-aminobutyryl-CoA ammonia lyase K18014 kal; 3-aminobutyryl-CoA ammonia-lyase [EC:4.3.1.14]
D CLPA_c08850 atoD; acetate CoA-transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CLPA_c15170 ctfA; butyrate--acetoacetate CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CLPA_c08840 ctfB1; butyrate--acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CLPA_c15180 ctfB2; butyrate--acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CLPA_c23760 aldA; putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:cpat00220]
D CLPA_c01460 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CLPA_c14690 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CLPA_c14700 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CLPA_c26290 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D CLPA_c38000 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLPA_c26820 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLPA_c26830 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CLPA_c20210 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLPA_c29510 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLPA_c16470 argJ; arginine biosynthesis bifunctional protein ArgJ 1 K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D CLPA_c16490 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CLPA_c13830 argB1; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CLPA_c16480 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CLPA_c16500 argD2; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CLPA_c04980 argD1; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:cpat00330]
D CLPA_c16900 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D CLPA_c17230 speE; polyamine aminopropyl transferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CLPA_c32930 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CLPA_c23760 aldA; putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLPA_c26290 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D CLPA_c22490 proC1; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CLPA_c38010 proC2; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CLPA_c38020 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CLPA_c38030 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CLPA_c20210 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLPA_c29510 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:cpat00340]
D CLPA_c32690 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CLPA_c32700 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D CLPA_c32610 hisE; phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D CLPA_c32620 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D CLPA_c32650 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CLPA_c32660 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CLPA_c32630 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CLPA_c32670 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D CLPA_c32640 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLPA_c33620 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLPA_c32710 hisK; putative histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D CLPA_c32680 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D CLPA_c23760 aldA; putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:cpat00350]
D CLPA_c20210 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLPA_c29510 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLPA_c32640 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLPA_c33620 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLPA_c28930 adhE4; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c05730 adhE1; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c15160 adhE2; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c15660 adhE3; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:cpat00360]
D CLPA_c11840 hbd1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CLPA_c28590 hbd2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CLPA_c20210 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLPA_c29510 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLPA_c32640 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLPA_c33620 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLPA_c07300 fldZ; 2-enoate reductase FldZ K10797 enr; 2-enoate reductase [EC:1.3.1.31]
D CLPA_c12010 hypothetical protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00380 Tryptophan metabolism [PATH:cpat00380]
D CLPA_c19680 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLPA_c35710 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c08620 thlA1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c23760 aldA; putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cpat00400]
D CLPA_c38330 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CLPA_c38310 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CLPA_c38250 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CLPA_c38260 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CLPA_c38300 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CLPA_c38290 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CLPA_c14130 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CLPA_c14140 trpGD1; bifunctional protein TrpGD K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CLPA_c14150 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D CLPA_c14170 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D CLPA_c14160 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CLPA_c14190 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CLPA_c14180 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CLPA_c38280 pheA2; P-protein K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D CLPA_c14090 ACT domain-containing protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D CLPA_c38320 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CLPA_c32290 pheA1; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D CLPA_c20210 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLPA_c29510 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLPA_c32640 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLPA_c33620 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cpat00410]
D CLPA_c32260 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CLPA_c11830 gabT1; putative 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CLPA_c39030 puuE; 4-aminobutyrate aminotransferase PuuE K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CLPA_c11050 hypothetical protein K25571 pydD; beta-alanine---2-oxoglutarate transaminase [EC:2.6.1.120]
D CLPA_c23760 aldA; putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLPA_c32250 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CLPA_c11100 preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D CLPA_c03300 pyrD1; dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D CLPA_c11080 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLPA_c03280 hyuA; D-phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLPA_c11060 amaB; N-carbamoyl-L-amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D CLPA_c11000 bcd2; acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLPA_c28620 bcd3; acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:cpat00430]
D CLPA_c20830 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLPA_c20820 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:cpat00440]
D CLPA_c34290 putative metal-dependent phosphoesterases PHP family K20859 phnPP; phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase [EC:3.1.4.57]
C 00450 Selenocompound metabolism [PATH:cpat00450]
D CLPA_c26360 metC4; cystathionine beta-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D CLPA_c26350 metC3; cystathionine beta-lyase MetC K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLPA_c32590 mccB; cystathionine gamma-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLPA_c13060 patB; cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLPA_c25080 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CLPA_c38360 csd3; putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CLPA_c36160 trxB2; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CLPA_c38100 34.2 kDa protein in rubredoxin operon K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CLPA_c35200 cysNC; bifunctional enzyme CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D CLPA_c35210 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CLPA_c03100 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CLPA_c01650 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cpat00460]
D CLPA_c25220 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CLPA_c22130 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cpat00470]
D CLPA_c27910 alr1; alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1]
D CLPA_c02540 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLPA_c37990 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CLPA_c37180 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CLPA_c31420 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D CLPA_c18730 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CLPA_c12330 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CLPA_c31450 kamD; D-lysine 5,6-aminomutase alpha subunit K01844 kamD; beta-lysine 5,6-aminomutase alpha subunit [EC:5.4.3.3]
D CLPA_c31440 kamE; D-lysine 5,6-aminomutase beta subunit K18011 kamE; beta-lysine 5,6-aminomutase beta subunit [EC:5.4.3.3]
C 00480 Glutathione metabolism [PATH:cpat00480]
D CLPA_c39170 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D CLPA_c17230 speE; polyamine aminopropyl transferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
D CLPA_c16960 lytD; beta-N-acetylglucosaminidase K23989 lytD; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:3.2.1.96]
C 00540 Lipopolysaccharide biosynthesis [PATH:cpat00540]
D CLPA_c15740 gmhB; D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
C 00542 O-Antigen repeat unit biosynthesis [PATH:cpat00542]
D CLPA_c35730 tagO; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cpat00541]
D CLPA_c16950 gtaB2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLPA_c07960 gtaB1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLPA_c06000 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLPA_c32880 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLPA_c06590 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CLPA_c06510 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CLPA_c17020 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLPA_c17030 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLPA_c17040 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLPA_c17150 spsK2; spore coat polysaccharide biosynthesis protein SpsK K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CLPA_c26310 putative dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CLPA_c08680 spsK1; spore coat polysaccharide biosynthesis protein SpsK K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CLPA_c07770 nucleotidyl transferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D CLPA_c07790 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D CLPA_c14550 manA; mannose-6-phosphate isomerase ManA K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CLPA_c35920 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLPA_c06520 algA; alginate biosynthesis protein AlgA K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLPA_c37520 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CLPA_c35720 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:cpat00550]
D CLPA_c39260 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLPA_c35600 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLPA_c27740 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CLPA_c37550 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CLPA_c37180 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CLPA_c18550 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 1 K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CLPA_c02540 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLPA_c18560 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CLPA_c20470 uppS2; isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLPA_c16300 uppS1; isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLPA_c13720 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLPA_c09800 uppP2; undecaprenyl-diphosphatase 2 K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLPA_c37840 PA-phosphatase-like phosphoesterase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLPA_c18570 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLPA_c17460 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CLPA_c17280 pbpA1; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLPA_c23580 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CLPA_c35810 spoVD2; stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CLPA_c18540 spoVD1; stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CLPA_c27770 pbpA2; penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D CLPA_c19310 dacF; D-alanyl-D-alanine carboxypeptidase DacF K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLPA_c19360 dacB2; D-alanyl-D-alanine carboxypeptidase DacB K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLPA_c23280 dacB3; D-alanyl-D-alanine carboxypeptidase DacB K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLPA_c15070 dacB1; D-alanyl-D-alanine carboxypeptidase DacB K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLPA_c14540 putative UDP-N-acetylmuramyl tripeptide synthetase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D CLPA_c14530 CobB/CobQ family glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:cpat00552]
D CLPA_c13720 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLPA_c09800 uppP2; undecaprenyl-diphosphatase 2 K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLPA_c37840 PA-phosphatase-like phosphoesterase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLPA_c35730 tagO; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CLPA_c17140 tagA; putative N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D CLPA_c06310 hypothetical protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D CLPA_c06360 transcriptional regulator, LytR family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D CLPA_c23300 lytR2; transcriptional regulator LytR K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D CLPA_c06490 lytR1; transcriptional regulator LytR K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D CLPA_c02520 ugtP1; processive diacylglycerol beta-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CLPA_c32970 ugtP2; processive diacylglycerol beta-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CLPA_c22640 ltaS2; lipoteichoic acid synthase 2 K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cpat00543]
D CLPA_c35730 tagO; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CLPA_c13250 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CLPA_c06550 glycosyltransferase K13658 gumI; beta-1,4-mannosyltransferase [EC:2.4.1.251]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cpat00730]
D CLPA_c33380 thiC; phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CLPA_c01420 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CLPA_c16210 iscS2; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLPA_c01340 iscS1; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLPA_c21540 iscS3; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLPA_c01350 thiI; putative tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D CLPA_c33350 thiH2; 2-iminoacetate synthase K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D CLPA_c11910 thiH1; 2-iminoacetate synthase K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D CLPA_c19120 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CLPA_c33360 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D CLPA_c33340 thiE2; thiamine-phosphate synthase K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D CLPA_c01430 thiM1; hydroxyethylthiazole kinase 2 K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CLPA_c01440 thiE1; thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CLPA_c20980 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CLPA_c04900 phoA; alkaline phosphatase 4 K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CLPA_c20960 thiN; thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D CLPA_c36540 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:cpat00740]
D CLPA_c01480 ribBA; riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CLPA_c01500 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CLPA_c11640 HAD-superfamily hydrolase, subfamily IIB K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D CLPA_c01470 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CLPA_c01490 ribE; riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CLPA_c20330 ribC; riboflavin biosynthesis protein RibC K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CLPA_c01430 thiM1; hydroxyethylthiazole kinase 2 K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CLPA_c19230 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CLPA_c10130 nudix (MutT) family hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:cpat00750]
D CLPA_c31220 thrC2; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CLPA_c14060 thrC1; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CLPA_c17360 pdxS; pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D CLPA_c17370 pdxT; glutamine amidotransferase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cpat00760]
D CLPA_c02330 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CLPA_c02320 nadA; quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D CLPA_c02340 nadC; putative nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CLPA_c15350 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CLPA_c19280 punA1; purine nucleoside phosphorylase 1 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CLPA_c19290 punA2; purine nucleoside phosphorylase 1 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CLPA_c32570 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CLPA_c23320 nadD; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CLPA_c00760 NUDIX family hydrolase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D CLPA_c16120 nadE; glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D CLPA_c01060 cobB1; NAD-dependent protein deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CLPA_c19140 nadK; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D CLPA_c02860 ndhF1; nicotinate dehydrogenase FAD-subunit K20445 ndhF; nicotinate dehydrogenase FAD-subunit [EC:1.17.1.5]
D CLPA_c02870 ndhS1; nicotinate dehydrogenase small FeS subunit K20446 ndhS; nicotinate dehydrogenase small FeS subunit [EC:1.17.1.5]
D CLPA_c02880 ndhL; nicotinate dehydrogenase large molybdopterin subunit K20447 ndhL; nicotinate dehydrogenase large molybdopterin subunit [EC:1.17.1.5]
D CLPA_c02890 hnr; 6-hydroxynicotinate reductase K20449 hnr; 6-hydroxynicotinate reductase [EC:1.3.7.1]
D CLPA_c02940 ena; enamidase K15358 ena; enamidase [EC:3.5.2.18]
D CLPA_c02850 hgd; 2-(hydroxymethyl)glutarate dehydrogenase K19647 hgd; 2-hydroxymethylglutarate dehydrogenase [EC:1.1.1.291]
C 00770 Pantothenate and CoA biosynthesis [PATH:cpat00770]
D CLPA_c06280 alsS; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLPA_c22710 ilvB1; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLPA_c29390 ilvB2; acetolactate synthase isozyme 1 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CLPA_c29380 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CLPA_c22700 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CLPA_c40100 ilvD3; dihydroxy-acid dehydratase 2 K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CLPA_c22660 ilvD2; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CLPA_c04320 ilvD1; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CLPA_c32240 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CLPA_c11900 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CLPA_c15920 apbA1; putative 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CLPA_c27730 apbA2; putative 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CLPA_c32250 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CLPA_c37240 coaX; type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CLPA_c21070 coaBC; putative coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CLPA_c20870 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CLPA_c24630 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CLPA_c27940 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CLPA_c29310 sfp; 4'-phosphopantetheinyl transferase Sfp K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D CLPA_c39290 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLPA_c17530 putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLPA_c11100 preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D CLPA_c03300 pyrD1; dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D CLPA_c11080 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLPA_c03280 hyuA; D-phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLPA_c11060 amaB; N-carbamoyl-L-amino acid hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D CLPA_c32260 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CLPA_c23760 aldA; putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:cpat00780]
D CLPA_c39590 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CLPA_c09330 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLPA_c26590 fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLPA_c39600 fabG4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLPA_c39570 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CLPA_c07840 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CLPA_c07830 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CLPA_c06230 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CLPA_c17440 pylB1; 3-methylornithine synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CLPA_c26320 birA; bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cpat00785]
D CLPA_c19620 lipB; octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CLPA_c19630 lipA2; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CLPA_c19680 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLPA_c19670 pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:cpat00790]
D CLPA_c02210 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CLPA_c04900 phoA; alkaline phosphatase 4 K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CLPA_c02240 sulD; bifunctional folate synthesis protein K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3]
D CLPA_c02230 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CLPA_c21970 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CLPA_c16450 folC; folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CLPA_c01480 ribBA; riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CLPA_c18750 trpGD2; bifunctional protein TrpGD K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D CLPA_c18760 pabB; aminodeoxychorismate synthase component 1 K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D CLPA_c18770 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D CLPA_c05390 queD; putative queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CLPA_c05400 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CLPA_c15720 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CLPA_c10320 moaA; cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CLPA_c03030 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CLPA_c10250 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CLPA_c10270 moeA; molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CLPA_c34030 putative molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CLPA_c34040 putative molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CLPA_c03240 molybdenum hydroxylase accessory protein, YgfJ family K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D CLPA_c03310 mocA; molybdenum cofactor cytidylyltransferase K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D CLPA_c10310 mobA; molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:cpat00670]
D CLPA_c21970 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CLPA_c37250 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CLPA_c19070 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CLPA_c17200 methenyl tetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D CLPA_c22130 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CLPA_c24740 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CLPA_c24730 purH2; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CLPA_c03710 purH1; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CLPA_c21040 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CLPA_c25080 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CLPA_c36960 thyX; thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CLPA_c26190 5,10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cpat00860]
D CLPA_c14980 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CLPA_c35190 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CLPA_c35160 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CLPA_c12510 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CLPA_c35180 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CLPA_c03610 flavodoxin K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D CLPA_c35170 hemD; porphyrin biosynthesis protein HemD K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D CLPA_c35340 cysG; siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D CLPA_c04450 nirD; protein NirD K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D CLPA_c04460 transcriptional regulator, AsnC family K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D CLPA_c04430 pqqE; coenzyme PQQ synthesis protein E K22226 ahbC; Fe-coproporphyrin III synthase
D CLPA_c04440 mftC; putative mycofactocin radical SAM maturase MftC K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D CLPA_c12520 cbiK; sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D CLPA_c12650 cbiL; cobalt-precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D CLPA_c12680 cbiH; cobalt-precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D CLPA_c12660 cbiF; cobalt-precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D CLPA_c12670 cbiG; cobalt-precorrin-5A hydrolase K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D CLPA_c12690 cbiJ; cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D CLPA_c12610 cbiD; cobalt-precorrin-5B C(1)-methyltransferase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D CLPA_c12640 cbiT; putative cobalt-precorrin-6B C(15)-methyltransferase (decarboxylating) K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D CLPA_c12630 cbiE; putative cobalt-precorrin-7 C(5)-methyltransferase K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D CLPA_c12600 cbiC; cobalt-precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D CLPA_c12580 cobB2; cobyrinic acid A,C-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D CLPA_c12570 btuR; Cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CLPA_c12530 cobQ; cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D CLPA_c12540 cobD1; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D CLPA_c33260 cobU; bifunctional adenosylcobalamin biosynthesis protein CobU K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D CLPA_c33250 cobS; cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D CLPA_c33270 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D CLPA_c33240 putative adenosylcobalamin/alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D CLPA_c12730 pduX; L-threonine kinase K16651 pduX; L-threonine kinase [EC:2.7.1.177]
D CLPA_c12560 cobD2; putative threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D CLPA_c15640 hypothetical protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cpat00130]
D CLPA_c25580 ubiE; demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CLPA_c25510 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D CLPA_c25500 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D CLPA_c25460 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D CLPA_c25430 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D CLPA_c25440 menE; 2-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D CLPA_c25450 menB; 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D CLPA_c25420 hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D CLPA_c25410 menA; putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D CLPA_c39090 NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CLPA_c16010 putative NADPH-quinone reductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cpat00900]
D CLPA_c19120 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CLPA_c20440 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CLPA_c36990 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CLPA_c02480 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CLPA_c01520 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CLPA_c20420 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CLPA_c35710 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c08620 thlA1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c04830 fni; isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D CLPA_c19100 farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CLPA_c20470 uppS2; isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLPA_c16300 uppS1; isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D CLPA_c23760 aldA; putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CLPA_c35820 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLPA_c27870 putative transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLPA_c27880 putative transketolase N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLPA_c08240 putative transketolase N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLPA_c08250 putative transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cpat00523]
D CLPA_c17020 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLPA_c17030 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLPA_c17040 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLPA_c17150 spsK2; spore coat polysaccharide biosynthesis protein SpsK K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CLPA_c26310 putative dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CLPA_c08680 spsK1; spore coat polysaccharide biosynthesis protein SpsK K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:cpat01054]
D CLPA_c31420 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:cpat01053]
D CLPA_c25510 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D CLPA_c08350 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics
D CLPA_c17030 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D CLPA_c10740 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:cpat00332]
D CLPA_c38020 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CLPA_c38030 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cpat00261]
D CLPA_c35200 cysNC; bifunctional enzyme CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D CLPA_c35210 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CLPA_c01040 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLPA_c32920 dapG; aspartokinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLPA_c12320 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLPA_c39050 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLPA_c16590 dapA1; 4-hydroxy-tetrahydrodipicolinate synthase 1 K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLPA_c08810 dapA2; 4-hydroxy-tetrahydrodipicolinate synthase 2 K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLPA_c16580 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cpat00521]
D CLPA_c31900 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLPA_c16930 pgcA1; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLPA_c10950 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D CLPA_c17020 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLPA_c17030 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLPA_c17040 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CLPA_c17150 spsK2; spore coat polysaccharide biosynthesis protein SpsK K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CLPA_c26310 putative dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CLPA_c08680 spsK1; spore coat polysaccharide biosynthesis protein SpsK K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CLPA_c31900 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:cpat00525]
D CLPA_c17020 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLPA_c17030 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:cpat00401]
D CLPA_c38320 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CLPA_c20210 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLPA_c29510 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLPA_c32640 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLPA_c33620 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CLPA_c14130 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CLPA_c14140 trpGD1; bifunctional protein TrpGD K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D CLPA_c39610 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CLPA_c09330 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLPA_c26590 fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLPA_c39600 fabG4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CLPA_c20780 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D CLPA_c35460 metK2; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CLPA_c33460 metK1; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:cpat00362]
D CLPA_c12010 hypothetical protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D CLPA_c15840 hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D CLPA_c31130 carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D CLPA_c27510 carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D CLPA_c11840 hbd1; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CLPA_c28590 hbd2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CLPA_c35710 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c08620 thlA1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:cpat00627]
D CLPA_c21980 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D CLPA_c08850 atoD; acetate CoA-transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CLPA_c15170 ctfA; butyrate--acetoacetate CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CLPA_c08840 ctfB1; butyrate--acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CLPA_c15180 ctfB2; butyrate--acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:cpat00625]
D CLPA_c28930 adhE4; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c05730 adhE1; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c15160 adhE2; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c15660 adhE3; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c23760 aldA; putative aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLPA_c38170 anfG; nitrogenase iron-iron protein delta chain K00531 anfG; nitrogenase delta subunit [EC:1.18.6.1]
D CLPA_c10430 nitrogenase molybdenum-iron protein subunit beta K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c10450 nifK5; nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c21950 hypothetical protein K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c22050 nitrogenase molybdenum-iron protein, alpha and beta subunit K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c02980 anfK1; nitrogenase iron-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c33880 nitrogenase molybdenum-iron protein, alpha and beta subunit K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c38160 anfK2; nitrogenase iron-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c14370 nifK1; nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c15230 nitrogenase molybdenum-iron protein, alpha and beta subunit K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c38950 hypothetical protein K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c23840 nitrogenase molybdenum-iron protein, alpha and beta subunit K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c19400 nifK2; nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c33530 nifK4; nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c33630 hypothetical protein K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c33670 nitrogenase molybdenum-iron protein, alpha and beta subunit K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D CLPA_c14350 nifH4; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLPA_c38200 nifH6; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLPA_c14250 nifH2; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLPA_c14340 nifH3; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLPA_c11150 nifH1; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLPA_c33550 nifH5; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLPA_c23850 nifD8; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c10420 nifE1; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c10440 nifE2; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c19390 nifE6; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c02970 nifD1; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c33480 nifD5; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c33540 nifD4; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c33640 nifE8; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c33680 nifE9; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c33890 nifD6; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c38180 anfD; nitrogenase iron-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c21960 nifE7; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c14360 nifD2; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c38960 nifD7; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c15220 nifD3; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D CLPA_c15600 family 2 glycosyl transferase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D CLPA_c15600 family 2 glycosyl transferase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
D CLPA_c12010 hypothetical protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00633 Nitrotoluene degradation [PATH:cpat00633]
D CLPA_c07070 periplasmic [NiFeSe] hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D CLPA_c07060 periplasmic [NiFeSe] hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D CLPA_c05080 cooS; carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CLPA_c34390 cooS1; carbon monoxide dehydrogenase 1 K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CLPA_c34380 cooF; iron-sulfur protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D CLPA_c39970 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D CLPA_c10990 ydiF; acetate CoA-transferase YdiF K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D CLPA_c12010 hypothetical protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00626 Naphthalene degradation [PATH:cpat00626]
D CLPA_c28930 adhE4; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c05730 adhE1; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c15160 adhE2; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLPA_c15660 adhE3; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cpat03020]
D CLPA_c36830 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CLPA_c36820 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CLPA_c36460 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CLPA_c21080 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D CLPA_c21580 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cpat03010]
D CLPA_c20510 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CLPA_c36690 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CLPA_c36470 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CLPA_c36580 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CLPA_c40830 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CLPA_c36790 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CLPA_c36610 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CLPA_c36390 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CLPA_c36760 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CLPA_c36480 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CLPA_c36800 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CLPA_c36490 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CLPA_c36620 rpsZ; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D CLPA_c20320 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CLPA_c20700 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CLPA_c36660 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CLPA_c40810 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CLPA_c36710 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CLPA_c23200 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CLPA_c23050 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D CLPA_c36860 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CLPA_c36720 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CLPA_c36750 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CLPA_c36740 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CLPA_c36630 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CLPA_c36600 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CLPA_c36840 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CLPA_c40710 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CLPA_c36850 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CLPA_c36870 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CLPA_c36400 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CLPA_c36650 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CLPA_c36560 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CLPA_c36680 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CLPA_c36450 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CLPA_c36590 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CLPA_c20660 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CLPA_c16780 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CLPA_c23370 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CLPA_c36700 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CLPA_c36730 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CLPA_c36640 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CLPA_c16910 rplY1; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CLPA_c29670 rplY2; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CLPA_c23350 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CLPA_c20940 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CLPA_c36670 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CLPA_c36570 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CLPA_c02620 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CLPA_c20800 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CLPA_c40990 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CLPA_c16770 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CLPA_c36500 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D CLPA_c36810 putative ribosomal protein L7Ae-like K07590 RP-L7A; large subunit ribosomal protein L7A
D CLPA_c00080 rrfA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c01070 rrfG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c01010 rrfF; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c37150 rrfJ; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c00670 rrfD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c00490 rrfB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c00570 rrfC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c14570 rrfH; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c34340 rrfI; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c00850 rrfE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c00680 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c00590 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c37120 rrlJ; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c00860 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c00090 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c34330 rrlI; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c00500 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c01020 rrlF; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c01080 rrlG; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c14580 rrlH; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c00100 rrsA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c37110 rrsJ; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c00600 rrsC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c34320 rrsI; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c00510 rrsB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c00870 rrsE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c01090 rrsG; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c01030 rrsF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c00690 rrsD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c14590 rrsH; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cpat00970]
D CLPA_c00120 trnA1; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLPA_c37160 trnA3; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLPA_c37140 trnA2; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLPA_c00740 trnR3; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLPA_c13580 trnR5; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLPA_c13500 trnR4; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLPA_c13670 trnR6; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLPA_c00260 trnR1; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLPA_c00350 trnR2; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLPA_c14600 trnN1; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLPA_c34310 trnN2; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLPA_c37200 trnN4; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLPA_c37100 trnN3; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLPA_c16660 trnD1; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLPA_c39710 trnD2; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLPA_c39750 trnD3; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLPA_c01110 trnC1; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CLPA_c16690 trnC2; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CLPA_c12880 trnQ1; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLPA_c13530 trnQ2; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLPA_c13600 trnQ3; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLPA_c00700 trnE1; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLPA_c39730 trnE3; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLPA_c39770 trnE4; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLPA_c26270 trnE2; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLPA_c00720 trnG1; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLPA_c13560 trnG4; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLPA_c13630 trnG6; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLPA_c16680 trnG8; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLPA_c36920 trnG9; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLPA_c00730 trnG2; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLPA_c13490 trnG3; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLPA_c13570 trnG5; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLPA_c13660 trnG7; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLPA_c13520 trnH1; tRNA-His K14226 tRNA-His; tRNA His
D CLPA_c13590 trnH2; tRNA-His K14226 tRNA-His; tRNA His
D CLPA_c00580 trnI1; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CLPA_c37130 trnI2; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CLPA_c26010 trnL5; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLPA_c28280 trnL6; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLPA_c00710 trnL1; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLPA_c13550 trnL2; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLPA_c13620 trnL3; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLPA_c24610 trnL4; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLPA_c37320 trnL7; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLPA_c37350 trnL8; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLPA_c00520 trnK1; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLPA_c00880 trnK2; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLPA_c13610 trnK5; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLPA_c13540 trnK4; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLPA_c13510 trnK3; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLPA_c13640 trnK6; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLPA_c37300 trnM3; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLPA_c37330 trnM5; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLPA_c00110 trnM1; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLPA_c37170 trnM2; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLPA_c37310 trnM4; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLPA_c37340 trnM6; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLPA_c00610 trnF1; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLPA_c01100 trnF2; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLPA_c16670 trnF3; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLPA_c13480 trnP1; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLPA_c37630 trnP3; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLPA_c13650 trnP2; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLPA_c00370 trnS3; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLPA_c00250 trnS2; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLPA_c00430 trnS4; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLPA_c00240 trnS1; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLPA_c35500 trnT1; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLPA_c39700 trnT3; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLPA_c39740 trnT4; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLPA_c36910 trnT2; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLPA_c40080 trnT5; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLPA_c35020 trnW2; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CLPA_c34540 trnW1; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CLPA_c35490 trnY1; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLPA_c35520 trnY2; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLPA_c16650 trnV1; tRNA-Val K14237 tRNA-Val; tRNA Val
D CLPA_c35510 trnV2; tRNA-Val K14237 tRNA-Val; tRNA Val
D CLPA_c39760 trnV4; tRNA-Val K14237 tRNA-Val; tRNA Val
D CLPA_c39720 trnV3; tRNA-Val K14237 tRNA-Val; tRNA Val
D CLPA_c14980 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CLPA_c01820 gatA3; glutamyl-tRNA(Gln) amidotransferase subunit A 2 K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CLPA_c28890 gatA2; glutamyl-tRNA(Gln) amidotransferase subunit A 1 K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CLPA_c13400 gatA1; glutamyl-tRNA(Gln) amidotransferase subunit A 1 K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CLPA_c01830 gatB3; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B 2 K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CLPA_c28900 gatB2; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B 1 K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CLPA_c13410 gatB1; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B 1 K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CLPA_c01810 gatC4; glutamyl-tRNA(Gln) amidotransferase subunit C 2 K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CLPA_c28880 gatC3; glutamyl-tRNA(Gln) amidotransferase subunit C 1 K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CLPA_c13390 gatC2; glutamyl-tRNA(Gln) amidotransferase subunit C 1 K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CLPA_c22100 alaXL; alanyl-tRNA editing protein AlaX-L K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLPA_c21490 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLPA_c22160 aspS2; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLPA_c01800 aspS1; aspartate--tRNA(Asp/Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D CLPA_c38050 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CLPA_c37190 glyQS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLPA_c16750 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CLPA_c00200 serS1; serine--tRNA ligase 1 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLPA_c36980 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CLPA_c01650 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CLPA_c21040 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CLPA_c16440 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CLPA_c12870 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLPA_c01930 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CLPA_c37210 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CLPA_c15790 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CLPA_c13990 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLPA_c22170 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CLPA_c16800 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CLPA_c16810 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CLPA_c12780 tyrS1; tyrosine--tRNA ligase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLPA_c12410 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cpat03060]
D CLPA_c36550 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CLPA_c36890 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CLPA_c28150 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CLPA_c22240 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CLPA_c22230 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CLPA_c22280 protein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CLPA_c03750 membrane protein insertase, YidC/Oxa1 family protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLPA_c40960 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLPA_c35370 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLPA_c24300 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D CLPA_c20710 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLPA_c20730 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CLPA_c04970 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CLPA_c07110 tatA; putative twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D CLPA_c34060 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D CLPA_c34050 Sec-independent protein secretion pathway component K03117 tatB; sec-independent protein translocase protein TatB
D CLPA_c07120 tatC1; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D CLPA_c07130 tatC2; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D CLPA_c34100 tatC3; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D CLPA_c00960 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLPA_c09170 lepB1; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLPA_c20650 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLPA_c21750 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLPA_c08520 lepB2; putative signal peptidase I-2 K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLPA_c18690 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cpat04122]
D CLPA_c16210 iscS2; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLPA_c01340 iscS1; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLPA_c21540 iscS3; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLPA_c16220 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CLPA_c10320 moaA; cyclic pyranopterin monophosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CLPA_c04510 moeZ1; putative adenylyltransferase/sulfurtransferase MoeZ K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D CLPA_c35310 moeZ2; putative adenylyltransferase/sulfurtransferase MoeZ K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D CLPA_c03030 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CLPA_c10250 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CLPA_c01350 thiI; putative tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D CLPA_c33370 thiS1; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D CLPA_c35320 thiS2; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D CLPA_c35300 putative metal-dependent protease PAD1/JAB1 superfamily K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6]
C 03050 Proteasome
C 03018 RNA degradation [PATH:cpat03018]
D CLPA_c28160 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLPA_c20310 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CLPA_c28140 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CLPA_c16360 cshA1; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLPA_c32980 dbpA; ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLPA_c20110 cshA2; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLPA_c20100 recQ; putative ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CLPA_c02610 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CLPA_c20240 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CLPA_c21440 rnjA2; ribonuclease J1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CLPA_c04930 rnjA1; ribonuclease J1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CLPA_c27660 pfkA1; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLPA_c23120 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLPA_c28520 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLPA_c19550 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D CLPA_c15780 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CLPA_c01330 tRNA nucleotidyltransferase/poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cpat03030]
D CLPA_c27670 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLPA_c39190 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLPA_c00440 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLPA_c01190 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLPA_c23210 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLPA_c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLPA_c40690 dnaC; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CLPA_c22900 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CLPA_c40820 ssb3; single-stranded DNA-binding protein 3 K03111 ssb; single-strand DNA-binding protein
D CLPA_c28690 ssb1; single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D CLPA_c20630 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CLPA_c24640 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLPA_c13370 ligA1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cpat03410]
D CLPA_c28550 putative N-glycosylase/DNA lyase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D CLPA_c13280 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CLPA_c35950 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CLPA_c01630 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CLPA_c00540 uracil-DNA glycosylase family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CLPA_c21670 exeA11; exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CLPA_c04490 nfo; putative endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CLPA_c24640 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLPA_c17450 recJ1; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLPA_c13370 ligA1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cpat03420]
D CLPA_c37460 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CLPA_c27800 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D CLPA_c27810 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D CLPA_c39110 uvrC2; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D CLPA_c27750 uvrC1; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D CLPA_c17880 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLPA_c26300 helD3; helicase IV K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLPA_c08720 helD1; helicase IV K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLPA_c15360 rep; ATP-dependent DNA helicase Rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLPA_c11940 helD2; helicase IV K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLPA_c13360 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLPA_c24640 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLPA_c13370 ligA1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLPA_c21580 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:cpat03430]
D CLPA_c19520 mutS3; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CLPA_c16890 mutS2; endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D CLPA_c31460 mutS5; endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D CLPA_c09560 mutS1; endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D CLPA_c19530 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CLPA_c17880 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLPA_c26300 helD3; helicase IV K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLPA_c08720 helD1; helicase IV K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLPA_c15360 rep; ATP-dependent DNA helicase Rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLPA_c11940 helD2; helicase IV K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLPA_c13360 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLPA_c19080 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CLPA_c19090 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CLPA_c17450 recJ1; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLPA_c40820 ssb3; single-stranded DNA-binding protein 3 K03111 ssb; single-strand DNA-binding protein
D CLPA_c28690 ssb1; single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D CLPA_c27670 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLPA_c39190 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLPA_c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLPA_c00440 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLPA_c23210 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLPA_c01190 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLPA_c13370 ligA1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLPA_c30880 mjaIIIM; modification methylase MjaIII K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:cpat03440]
D CLPA_c17450 recJ1; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLPA_c40820 ssb3; single-stranded DNA-binding protein 3 K03111 ssb; single-strand DNA-binding protein
D CLPA_c28690 ssb1; single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D CLPA_c00040 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CLPA_c22960 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CLPA_c00460 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CLPA_c20250 recA; protein RecA K03553 recA; recombination protein RecA
D CLPA_c24640 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLPA_c22320 ruvA; holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CLPA_c22310 ruvB; holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CLPA_c20910 recG1; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLPA_c26510 recG2; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLPA_c04620 transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLPA_c35450 RecD/TraA family helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CLPA_c27670 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLPA_c39190 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLPA_c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLPA_c00440 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLPA_c23210 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLPA_c01190 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLPA_c21060 priA1; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cpat02010]
D CLPA_c04330 sbp; sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D CLPA_c04340 cysU; sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D CLPA_c04350 cysW; sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D CLPA_c04360 cysA; sulfate/thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D CLPA_c31210 ssuA; putative aliphatic sulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CLPA_c35240 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein
D CLPA_c07000 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component K15553 ssuA; sulfonate transport system substrate-binding protein
D CLPA_c31240 ssuC2; putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein
D CLPA_c35220 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein
D CLPA_c07010 nrtB; nitrate transport permease protein NrtB K15554 ssuC; sulfonate transport system permease protein
D CLPA_c31230 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CLPA_c07020 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CLPA_c35230 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CLPA_c14400 modA; molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CLPA_c14410 nifC; putative transport system permease protein NifC K02018 modB; molybdate transport system permease protein
D CLPA_c25270 futA1; iron uptake protein A1 K02012 afuA; iron(III) transport system substrate-binding protein
D CLPA_c25260 fbpB; Fe(3+)-transport system permease protein FbpB 2 K02011 afuB; iron(III) transport system permease protein
D CLPA_c25250 potG; putrescine transport ATP-binding protein PotG K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CLPA_c21790 potD; spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CLPA_c21800 potC; spermidine/putrescine transport system permease protein PotC K11070 potC; spermidine/putrescine transport system permease protein
D CLPA_c21810 potB; spermidine/putrescine transport system permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D CLPA_c21820 potA; spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CLPA_c38220 opuCC; carnitine transport binding protein OpuCC K05845 opuC; osmoprotectant transport system substrate-binding protein
D CLPA_c38230 opuCA; carnitine transport ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CLPA_c37900 msmX; maltodextrin import ATP-binding protein MsmX K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CLPA_c18080 msmE1; multiple sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D CLPA_c31950 msmE2; multiple sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D CLPA_c18090 amyD1; putative starch degradation products transport system permease protein AmyD K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D CLPA_c31940 amyD3; putative starch degradation products transport system permease protein AmyD K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D CLPA_c18100 msmG1; multiple sugar-binding transport system permease protein MsmG K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D CLPA_c31930 msmG2; multiple sugar-binding transport system permease protein MsmG K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D CLPA_c02770 purine-binding protein BAB2 K07335 bmpA; basic membrane protein A and related proteins
D CLPA_c02790 tsgB13; glucose ABC transporter permease protein TsgB13 K23535 nupB; general nucleoside transport system permease protein
D CLPA_c02800 tsgC13; putative glucose ABC transporter permease protein TsgC13 K23536 nupC; general nucleoside transport system permease protein
D CLPA_c02780 ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein
D CLPA_c10770 mocB; putative rhizopine-binding protein K17213 K17213; inositol transport system substrate-binding protein
D CLPA_c05480 ugpB1; sn-glycerol-3-phosphate-binding periplasmic protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CLPA_c29690 ugpB2; sn-glycerol-3-phosphate-binding periplasmic protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CLPA_c05460 ugpA1; sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CLPA_c29710 ugpA2; sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CLPA_c05470 ugpE1; sn-glycerol-3-phosphate transport system permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CLPA_c29700 ugpE2; sn-glycerol-3-phosphate transport system permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CLPA_c21240 pstS; phosphate-binding protein PstS 1 K02040 pstS; phosphate transport system substrate-binding protein
D CLPA_c21230 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D CLPA_c21220 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D CLPA_c21210 pstB; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CLPA_c11860 hisJ; histidine-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D CLPA_c06250 glnH; glutamine-binding periplasmic protein K10036 glnH; glutamine transport system substrate-binding protein
D CLPA_c11870 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family K10037 glnP; glutamine transport system permease protein
D CLPA_c06260 glnP1; glutamine transport system permease protein GlnP K10037 glnP; glutamine transport system permease protein
D CLPA_c11880 glnQ2; glutamine transport ATP-binding protein GlnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D CLPA_c06270 glnQ1; glutamine transport ATP-binding protein GlnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D CLPA_c39420 peb1A; major cell-binding factor K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D CLPA_c39400 glnP2; putative glutamine ABC transporter permease protein GlnP K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D CLPA_c39410 glnM; putative glutamine ABC transporter permease protein GlnM K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D CLPA_c39430 glnQ3; glutamine transport ATP-binding protein GlnQ K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D CLPA_c29610 metQ; putative D-methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein
D CLPA_c29590 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D CLPA_c29600 metN2; methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein
D CLPA_c10540 oppA; oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D CLPA_c13420 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CLPA_c10500 oppB; oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D CLPA_c10510 oppC; oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D CLPA_c10520 oppD; oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D CLPA_c10530 appF; oligopeptide transport ATP-binding protein AppF K10823 oppF; oligopeptide transport system ATP-binding protein
D CLPA_c39450 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D CLPA_c35760 putative metal transport system membrane protein TP K09816 znuB; zinc transport system permease protein
D CLPA_c35750 putative metal transport system ATP-binding protein TP K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CLPA_c12480 cbiN; cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D CLPA_c12470 cbiM; cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CLPA_c12490 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D CLPA_c12500 putative ABC transporter ATP-binding protein MA K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CLPA_c00980 hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D CLPA_c07820 bioY; putative biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D CLPA_c36420 ecfT; energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D CLPA_c36440 ecfA1; energy-coupling factor transporter ATP-binding protein EcfA1 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLPA_c36430 ecfA2; energy-coupling factor transporter ATP-binding protein EcfA2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLPA_c17060 rfbA; O-antigen export system permease protein RfbA K09690 wzm; homopolymeric O-antigen transport system permease protein
D CLPA_c08490 natB; protein NatB K09696 natB; sodium transport system permease protein
D CLPA_c08480 natA1; ATP-binding transport protein NatA K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D CLPA_c10380 ABC transporter multidrug-family permease K19310 bcrB; bacitracin transport system permease protein
D CLPA_c10390 bcrA3; bacitracin transport ATP-binding protein BcrA K19309 bcrA; bacitracin transport system ATP-binding protein
D CLPA_c38580 permease K11632 bceB; bacitracin transport system permease protein
D CLPA_c38590 ABC-type antimicrobial peptide transport system, ATPase component K11631 bceA; bacitracin transport system ATP-binding protein
D CLPA_c04230 lantibiotic protection ABC transporter permease subunit, MutE/EpiE family K20491 nisE; lantibiotic transport system permease protein
D CLPA_c04240 lantibiotic protection ABC transporter permease subunit, MutG family K20492 nisG; lantibiotic transport system permease protein
D CLPA_c04220 srtF; lantibiotic transport ATP-binding protein SrtF K20490 nisF; lantibiotic transport system ATP-binding protein
D CLPA_c07210 ABC transporter K09808 lolC_E; lipoprotein-releasing system permease protein
D CLPA_c07220 lolD2; lipoprotein-releasing system ATP-binding protein LolD 2 K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CLPA_c27840 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CLPA_c27850 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CLPA_c37560 ABC-type multidrug transport system, ATPase and permease component K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLPA_c37570 ABC-type multidrug transport system, ATPase and permease component K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLPA_c11410 putative ABC transporter ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLPA_c33300 ABC-type multidrug transport system, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLPA_c03010 ABC-type multidrug transport system, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLPA_c03020 ABC transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLPA_c33290 ABC-type multidrug transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLPA_c11420 ABC transporter, ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLPA_c02020 lagD; lactococcin-G-processing and transport ATP-binding protein LagD K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D CLPA_c29850 ABC transporter K18231 msr; macrolide transport system ATP-binding/permease protein
D CLPA_c34530 expZ; nucleotide-binding protein ExpZ K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:cpat02060]
D CLPA_c36290 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CLPA_c20190 hpr; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D CLPA_c17380 ptsG1; PTS system glucose-specific EIICBA component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLPA_c20200 crr2; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLPA_c18920 ptsG2; PTS system glucose-specific EIICBA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLPA_c01230 crr1; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLPA_c32550 PTS system glucose subfamily transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLPA_c29830 scrA; PTS system sucrose-specific EIIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CLPA_c05600 bglP; PTS system beta-glucoside-specific EIIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CLPA_c18890 aglA; PTS system alpha-glucoside-specific EIICB component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D CLPA_c32010 malP; PTS system maltose-specific EIICB component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D CLPA_c03700 treP; PTS system trehalose-specific EIIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D CLPA_c28820 mtlF; mannitol-specific phosphotransferase enzyme IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D CLPA_c28840 mtlA; PTS system mannitol-specific EIICB component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D CLPA_c36260 manX2; PTS system mannose-specific EIIAB component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CLPA_c36240 manX1; PTS system mannose-specific EIIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D CLPA_c31870 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC K02795 manY; mannose PTS system EIIC component
D CLPA_c36230 sorA2; sorbose permease IIC component K02795 manY; mannose PTS system EIIC component
D CLPA_c31860 manZ1; mannose permease IID component K02796 manZ; mannose PTS system EIID component
D CLPA_c36220 manZ2; mannose permease IID component K02796 manZ; mannose PTS system EIID component
D CLPA_c31890 phosphotransferase system, mannose/fructose-specific component IIA K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D CLPA_c29000 PTS system, mannose/fructose/sorbose family, IIA component K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206]
D CLPA_c28990 sorB; sorbose-specific phosphotransferase enzyme IIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206]
D CLPA_c28980 sorA1; sorbose permease IIC component K02814 sorA; sorbose PTS system EIIC component
D CLPA_c28970 sorM; sorbose permease IID component K02815 sorM; sorbose PTS system EIID component
D CLPA_c28750 PTS system, glucitol/sorbitol-specific, IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D CLPA_c28760 srlE; glucitol/sorbitol-specific phosphotransferase enzyme IIB component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CLPA_c28770 srlA; glucitol/sorbitol permease IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D CLPA_c05960 PTS system galactitol specific transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D CLPA_c05970 PTS system, lactose/cellobiose specific IIB subunit K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D CLPA_c05980 galactitol permease IIC component K02775 gatC; galactitol PTS system EIIC component
D CLPA_c08170 PTS system IIA component, L-Asc family K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CLPA_c08200 PTS system IIB component, L-Asc family K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CLPA_c08180 ulaA; ascorbate-specific permease IIC component UlaA K03475 ulaA; ascorbate PTS system EIIC component
D CLPA_c39140 fruA2; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CLPA_c39910 fruA3; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CLPA_c39920 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:cpat03070]
D CLPA_c22240 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CLPA_c22230 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CLPA_c36890 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CLPA_c28150 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CLPA_c36550 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CLPA_c22280 protein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CLPA_c03750 membrane protein insertase, YidC/Oxa1 family protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLPA_c40960 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLPA_c35370 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLPA_c20730 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CLPA_c24300 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D CLPA_c20710 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLPA_c07110 tatA; putative twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D CLPA_c34060 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D CLPA_c34050 Sec-independent protein secretion pathway component K03117 tatB; sec-independent protein translocase protein TatB
D CLPA_c07120 tatC1; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D CLPA_c07130 tatC2; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D CLPA_c34100 tatC3; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cpat02020]
D CLPA_c21260 phoR4; alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLPA_c29530 resE7; sensor histidine kinase ResE K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLPA_c21270 phoP1; alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLPA_c24960 phoP2; alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLPA_c29520 phoP3; alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLPA_c13890 walR2; transcriptional regulatory protein WalR K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLPA_c04900 phoA; alkaline phosphatase 4 K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CLPA_c21240 pstS; phosphate-binding protein PstS 1 K02040 pstS; phosphate transport system substrate-binding protein
D CLPA_c02200 cssS; sensor histidine kinase CssS K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D CLPA_c02190 cssR; transcriptional regulatory protein CssR K07770 cssR; two-component system, OmpR family, response regulator CssR
D CLPA_c16270 htrB1; serine protease Do-like HtrB K04771 degP; serine protease Do [EC:3.4.21.107]
D CLPA_c37480 htrB2; serine protease Do-like HtrB K04771 degP; serine protease Do [EC:3.4.21.107]
D CLPA_c17800 fla; flagellin K02406 fliC; flagellin
D CLPA_c18110 hag; flagellin K02406 fliC; flagellin
D CLPA_c18340 whiG; RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA
D CLPA_c01240 motA; motility protein A K02556 motA; chemotaxis protein MotA
D CLPA_c32350 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CLPA_c32340 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CLPA_c32380 kdpA; potassium-transporting ATPase A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D CLPA_c32370 kdpB; potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D CLPA_c32360 kdpC; potassium-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D CLPA_c37500 srrA2; transcriptional regulatory protein SrrA K07775 resD; two-component system, OmpR family, response regulator ResD
D CLPA_c38610 Two-component response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D CLPA_c03870 sacB1; levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D CLPA_c05690 sacB2; levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D CLPA_c06780 sacB3; levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D CLPA_c10840 lsc; levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D CLPA_c00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CLPA_c38590 ABC-type antimicrobial peptide transport system, ATPase component K11631 bceA; bacitracin transport system ATP-binding protein
D CLPA_c38580 permease K11632 bceB; bacitracin transport system permease protein
D CLPA_c09790 sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D CLPA_c09780 DNA-binding response regulator K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ
D CLPA_c09810 peptide ABC transporter, Pep4E family, ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D CLPA_c09820 peptide ABC transporter permease K11636 yxdM; putative ABC transport system permease protein
D CLPA_c30360 dltS; sensor protein DltS K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CLPA_c16260 resE4; sensor histidine kinase ResE K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLPA_c29300 arlS; signal transduction histidine-protein kinase ArlS K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D CLPA_c29290 arlR2; response regulator ArlR K18941 arlR; two-component system, OmpR family, response regulator ArlR
D CLPA_c04260 integral membrane sensor signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLPA_c04250 spaR; transcriptional regulatory protein SpaR K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLPA_c23530 nisP; nisin leader peptide-processing serine protease NisP K20486 nisP; lantibiotic leader peptide-processing serine protease [EC:3.4.21.-]
D CLPA_c04220 srtF; lantibiotic transport ATP-binding protein SrtF K20490 nisF; lantibiotic transport system ATP-binding protein
D CLPA_c04230 lantibiotic protection ABC transporter permease subunit, MutE/EpiE family K20491 nisE; lantibiotic transport system permease protein
D CLPA_c04240 lantibiotic protection ABC transporter permease subunit, MutG family K20492 nisG; lantibiotic transport system permease protein
D CLPA_c19180 spo0A; stage 0 sporulation protein A-like protein K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CLPA_c36330 phosphoribosyl-dephospho-CoA transferase K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D CLPA_c25100 malS; putative NAD-dependent malic enzyme 3 K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CLPA_c31320 lrgA2; antiholin-like protein LrgA K05338 lrgA; holin-like protein
D CLPA_c31310 lrgB3; antiholin-like protein LrgB K05339 lrgB; holin-like protein LrgB
D CLPA_c08480 natA1; ATP-binding transport protein NatA K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D CLPA_c08490 natB; protein NatB K09696 natB; sodium transport system permease protein
D CLPA_c25020 accessory gene regulator B K07813 agrB; accessory gene regulator B
D CLPA_c33090 accessory gene regulator B superfamily protein K07813 agrB; accessory gene regulator B
D CLPA_c19990 hypothetical protein K07813 agrB; accessory gene regulator B
D CLPA_c28090 putative AgrB-like protein 2 K07813 agrB; accessory gene regulator B
D CLPA_c20620 accessory gene regulator B K07813 agrB; accessory gene regulator B
D CLPA_c12960 putative AgrB-like protein K07813 agrB; accessory gene regulator B
D CLPA_c28080 hypothetical protein K07800 agrD; AgrD protein
D CLPA_c19920 GHKL domain-containing protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLPA_c04670 sensor histidine kinase-like protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLPA_c12980 GHKL domain-containing protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLPA_c10700 agrA2; accessory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CLPA_c19980 agrA4; accessory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CLPA_c04660 agrA1; accessory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CLPA_c12990 agrA3; accessory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CLPA_c17720 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D CLPA_c38920 hypothetical protein K11621 liaG; lia operon protein LiaG
D CLPA_c03140 signal transduction histidine kinase K11623 ydfH; two-component system, NarL family, sensor histidine kinase YdfH [EC:2.7.13.3]
D CLPA_c03150 two component transcriptional regulator, LuxR family K11624 ydfI; two-component system, NarL family, response regulator YdfI
D CLPA_c03130 membrane export protein K11625 ydfJ; membrane protein YdfJ
D CLPA_c33850 nrgB; nitrogen regulatory PII-like protein K04751 glnB; nitrogen regulatory protein P-II 1
D CLPA_c38000 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLPA_c08850 atoD; acetate CoA-transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CLPA_c15170 ctfA; butyrate--acetoacetate CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CLPA_c08840 ctfB1; butyrate--acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CLPA_c15180 ctfB2; butyrate--acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D CLPA_c18040 atoE; short-chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter
D CLPA_c35710 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c08620 thlA1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c28220 rpoN; putative RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CLPA_c18810 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D CLPA_c14810 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA
D CLPA_c07060 periplasmic [NiFeSe] hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D CLPA_c07070 periplasmic [NiFeSe] hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D CLPA_c10790 cheR3; putative methyltransferase cher3 K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CLPA_c17600 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CLPA_c36200 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c02130 tlpB1; methyl-accepting chemotaxis protein TlpB K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c12910 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c21250 mcpB; methyl-accepting chemotaxis protein McpB K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c14020 tlpC; methyl-accepting chemotaxis protein TlpC K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c06130 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c06190 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c06200 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c06220 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c06330 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c06810 mcp4; methyl-accepting chemotaxis protein 4 K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c17570 cheW2; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLPA_c17640 cheW1; putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLPA_c17610 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLPA_c17630 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLPA_c17590 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CLPA_c35880 CRP/FNR family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLPA_c10620 glnK; sensor histidine kinase GlnK K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D CLPA_c10610 glnL; transcriptional regulatory protein GlnL K07719 glnL; two-component system, response regulator GlnL
D CLPA_c22730 Two-component response regulator K07720 yesN; two-component system, response regulator YesN
D CLPA_c35720 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CLPA_c17670 anti-sigma-28 factor, FlgM family K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D CLPA_c26290 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cpat02024]
D CLPA_c23670 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CLPA_c19550 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D CLPA_c14130 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CLPA_c14140 trpGD1; bifunctional protein TrpGD K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CLPA_c32340 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CLPA_c09380 hypothetical protein K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32]
D CLPA_c09880 beta-lactamase domain-containing protein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D CLPA_c35880 CRP/FNR family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLPA_c01500 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CLPA_c39320 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLPA_c28080 hypothetical protein K07800 agrD; AgrD protein
D CLPA_c25020 accessory gene regulator B K07813 agrB; accessory gene regulator B
D CLPA_c33090 accessory gene regulator B superfamily protein K07813 agrB; accessory gene regulator B
D CLPA_c19990 hypothetical protein K07813 agrB; accessory gene regulator B
D CLPA_c28090 putative AgrB-like protein 2 K07813 agrB; accessory gene regulator B
D CLPA_c20620 accessory gene regulator B K07813 agrB; accessory gene regulator B
D CLPA_c12960 putative AgrB-like protein K07813 agrB; accessory gene regulator B
D CLPA_c19920 GHKL domain-containing protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLPA_c04670 sensor histidine kinase-like protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLPA_c12980 GHKL domain-containing protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLPA_c10700 agrA2; accessory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CLPA_c19980 agrA4; accessory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CLPA_c04660 agrA1; accessory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CLPA_c12990 agrA3; accessory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CLPA_c30360 dltS; sensor protein DltS K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CLPA_c10540 oppA; oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D CLPA_c13420 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CLPA_c10500 oppB; oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D CLPA_c10510 oppC; oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D CLPA_c10520 oppD; oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D CLPA_c10530 appF; oligopeptide transport ATP-binding protein AppF K10823 oppF; oligopeptide transport system ATP-binding protein
D CLPA_c02020 lagD; lactococcin-G-processing and transport ATP-binding protein LagD K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D CLPA_c02040 multidrug resistance efflux pump K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D CLPA_c03750 membrane protein insertase, YidC/Oxa1 family protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLPA_c40960 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLPA_c36890 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CLPA_c28150 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CLPA_c36550 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CLPA_c22280 protein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CLPA_c35370 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLPA_c20730 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CLPA_c24300 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D CLPA_c20710 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLPA_c19180 spo0A; stage 0 sporulation protein A-like protein K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CLPA_c15500 putative phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CLPA_c23530 nisP; nisin leader peptide-processing serine protease NisP K20486 nisP; lantibiotic leader peptide-processing serine protease [EC:3.4.21.-]
D CLPA_c04260 integral membrane sensor signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLPA_c04250 spaR; transcriptional regulatory protein SpaR K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLPA_c04220 srtF; lantibiotic transport ATP-binding protein SrtF K20490 nisF; lantibiotic transport system ATP-binding protein
D CLPA_c04230 lantibiotic protection ABC transporter permease subunit, MutE/EpiE family K20491 nisE; lantibiotic transport system permease protein
D CLPA_c04240 lantibiotic protection ABC transporter permease subunit, MutG family K20492 nisG; lantibiotic transport system permease protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:cpat02030]
D CLPA_c36200 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c02130 tlpB1; methyl-accepting chemotaxis protein TlpB K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c12910 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c21250 mcpB; methyl-accepting chemotaxis protein McpB K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c14020 tlpC; methyl-accepting chemotaxis protein TlpC K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c06130 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c06190 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c06200 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c06220 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c06330 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c06810 mcp4; methyl-accepting chemotaxis protein 4 K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c17610 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLPA_c17570 cheW2; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLPA_c17640 cheW1; putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLPA_c17630 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLPA_c17620 cheC; CheY-P phosphatase CheC K03410 cheC; chemotaxis protein CheC
D CLPA_c17590 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CLPA_c17580 cheD; putative chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D CLPA_c10790 cheR3; putative methyltransferase cher3 K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CLPA_c17600 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CLPA_c18160 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CLPA_c17650 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CLPA_c17660 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D CLPA_c01240 motA; motility protein A K02556 motA; chemotaxis protein MotA
D CLPA_c01250 motB; motility protein B K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:cpat02040]
D CLPA_c18140 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CLPA_c18150 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D CLPA_c18160 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CLPA_c18170 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D CLPA_c18180 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CLPA_c18190 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D CLPA_c18200 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D CLPA_c18250 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D CLPA_c17650 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CLPA_c17660 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D CLPA_c18260 fliZ; flagellar biosynthesis protein FliZ K02418 fliO; flagellar protein FliO/FliZ
D CLPA_c18270 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CLPA_c18280 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CLPA_c18300 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CLPA_c18290 flhB; flagellar biosynthetic protein FlhB K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB
D CLPA_c18120 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CLPA_c18130 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CLPA_c18210 flgD; flagellar hook capping protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D CLPA_c18230 flgG1; flagellar basal-body rod protein FlgG K02390 flgE; flagellar hook protein FlgE
D CLPA_c18370 flgG2; flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D CLPA_c18380 flgG3; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D CLPA_c17690 flgK; flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D CLPA_c17700 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D CLPA_c17800 fla; flagellin K02406 fliC; flagellin
D CLPA_c18110 hag; flagellin K02406 fliC; flagellin
D CLPA_c17760 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D CLPA_c17750 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CLPA_c01240 motA; motility protein A K02556 motA; chemotaxis protein MotA
D CLPA_c01250 motB; motility protein B K02557 motB; chemotaxis protein MotB
D CLPA_c17670 anti-sigma-28 factor, FlgM family K02398 flgM; negative regulator of flagellin synthesis FlgM
D CLPA_c22890 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D CLPA_c28220 rpoN; putative RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CLPA_c18340 whiG; RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CLPA_c28160 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D CLPA_c25080 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cpat01501]
D CLPA_c10540 oppA; oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D CLPA_c13420 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CLPA_c10500 oppB; oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D CLPA_c10510 oppC; oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D CLPA_c10520 oppD; oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D CLPA_c10530 appF; oligopeptide transport ATP-binding protein AppF K10823 oppF; oligopeptide transport system ATP-binding protein
D CLPA_c10740 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CLPA_c39370 multidrug resistance efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D CLPA_c17280 pbpA1; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLPA_c23580 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cpat01502]
D CLPA_c16260 resE4; sensor histidine kinase ResE K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLPA_c02540 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLPA_c27910 alr1; alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1]
D CLPA_c18560 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CLPA_c18570 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLPA_c17460 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cpat01503]
D CLPA_c06800 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLPA_c40180 lyc4; autolytic lysozyme K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLPA_c36360 cwlD; germination-specific N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLPA_c34570 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLPA_c16270 htrB1; serine protease Do-like HtrB K04771 degP; serine protease Do [EC:3.4.21.107]
D CLPA_c37480 htrB2; serine protease Do-like HtrB K04771 degP; serine protease Do [EC:3.4.21.107]
D CLPA_c39370 multidrug resistance efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cpat01000]
C 01001 Protein kinases [BR:cpat01001]
D CLPA_c20990 putative serine/threonine-protein kinase CA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CLPA_c06950 sps1; putative serine/threonine-protein kinase Sps1 K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CLPA_c06650 capsular exopolysaccharide family protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D CLPA_c21260 phoR4; alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLPA_c29530 resE7; sensor histidine kinase ResE K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLPA_c02200 cssS; sensor histidine kinase CssS K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D CLPA_c32350 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CLPA_c09790 sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D CLPA_c30360 dltS; sensor protein DltS K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CLPA_c16260 resE4; sensor histidine kinase ResE K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLPA_c29300 arlS; signal transduction histidine-protein kinase ArlS K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D CLPA_c04260 integral membrane sensor signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLPA_c13210 phoR3; alkaline phosphatase synthesis sensor protein PhoR K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CLPA_c03140 signal transduction histidine kinase K11623 ydfH; two-component system, NarL family, sensor histidine kinase YdfH [EC:2.7.13.3]
D CLPA_c19920 GHKL domain-containing protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLPA_c04670 sensor histidine kinase-like protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLPA_c12980 GHKL domain-containing protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLPA_c31340 putative regulator of cell autolysis K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CLPA_c28670 lytS; sensor protein LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CLPA_c17610 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLPA_c10620 glnK; sensor histidine kinase GlnK K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D CLPA_c29950 pdtaS; putative sensor histidine kinase PdtaS K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D CLPA_c10760 resE2; sensor histidine kinase ResE K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cpat01009]
D CLPA_c27660 pfkA1; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLPA_c32840 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CLPA_c06930 prpC; protein serine/threonine phosphatase PrpC K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D CLPA_c21000 stp; serine/threonine phosphatase Stp K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:cpat01002]
D CLPA_c18690 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CLPA_c14930 type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CLPA_c23190 gpr; germination protease K06012 gpr; spore protease [EC:3.4.24.78]
D CLPA_c07080 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D CLPA_c21330 spoIIGA; putative sporulation sigma-E factor-processing peptidase K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D CLPA_c28500 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CLPA_c10560 ntpR; protein NtpR K07010 K07010; putative glutamine amidotransferase
D CLPA_c02020 lagD; lactococcin-G-processing and transport ATP-binding protein LagD K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D CLPA_c06480 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLPA_c01310 putative endopeptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLPA_c01300 iap; putative endopeptidase p60 K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLPA_c25240 protein P54 K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLPA_c25190 protein P54 K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLPA_c24760 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CLPA_c21570 gltB; ferredoxin-dependent glutamate synthase 1 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CLPA_c28920 glmS; glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CLPA_c38060 asnO; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CLPA_c15000 pfpI; intracellular protease 1 K05520 yhbO; deglycase [EC:3.5.1.124]
D CLPA_c17420 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D CLPA_c21170 sortase B K08600 srtB; sortase B [EC:3.4.22.71]
D CLPA_c02260 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D CLPA_c25020 accessory gene regulator B K07813 agrB; accessory gene regulator B
D CLPA_c33090 accessory gene regulator B superfamily protein K07813 agrB; accessory gene regulator B
D CLPA_c19990 hypothetical protein K07813 agrB; accessory gene regulator B
D CLPA_c28090 putative AgrB-like protein 2 K07813 agrB; accessory gene regulator B
D CLPA_c20620 accessory gene regulator B K07813 agrB; accessory gene regulator B
D CLPA_c12960 putative AgrB-like protein K07813 agrB; accessory gene regulator B
D CLPA_c01920 putative metal-dependent membrane protease K07052 K07052; CAAX protease family protein
D CLPA_c01970 putative metal-dependent membrane protease K07052 K07052; CAAX protease family protein
D CLPA_c15040 CAAX amino protease family protein K07052 K07052; CAAX protease family protein
D CLPA_c25570 protease K07052 K07052; CAAX protease family protein
D CLPA_c32190 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D CLPA_c07870 gamma-D-glutamyl-L-diamino acid endopeptidase 1 K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11]
D CLPA_c21620 hypA2; protein HypA K06972 PITRM1; presequence protease [EC:3.4.24.-]
D CLPA_c19890 pqqL; putative zinc protease PqqL K07263 pqqL; zinc protease [EC:3.4.24.-]
D CLPA_c39860 dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CLPA_c09540 pepV1; M20 family peptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CLPA_c32280 pepV2; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CLPA_c02150 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D CLPA_c36530 map2; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CLPA_c12230 map1; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CLPA_c18950 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CLPA_c21840 aminopeptidase 2 K19689 ampS; aminopeptidase [EC:3.4.11.-]
D CLPA_c00790 Zn-dependent carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D CLPA_c32160 ftsH3; ATP-dependent zinc metalloprotease FtsH 1 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLPA_c37260 ftsH2; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLPA_c11930 ftsH1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLPA_c28300 glutamyl aminopeptidase family protein K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D CLPA_c23410 putative metalloprotease K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-]
D CLPA_c20430 putative zinc metalloprotease CA K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D CLPA_c04770 hypothetical protein K16922 yydH; putative peptide zinc metalloprotease protein
D CLPA_c16270 htrB1; serine protease Do-like HtrB K04771 degP; serine protease Do [EC:3.4.21.107]
D CLPA_c37480 htrB2; serine protease Do-like HtrB K04771 degP; serine protease Do [EC:3.4.21.107]
D CLPA_c23530 nisP; nisin leader peptide-processing serine protease NisP K20486 nisP; lantibiotic leader peptide-processing serine protease [EC:3.4.21.-]
D CLPA_c39330 aprX; serine protease AprX K17734 aprX; serine protease AprX [EC:3.4.21.-]
D CLPA_c19310 dacF; D-alanyl-D-alanine carboxypeptidase DacF K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLPA_c19360 dacB2; D-alanyl-D-alanine carboxypeptidase DacB K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLPA_c23280 dacB3; D-alanyl-D-alanine carboxypeptidase DacB K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLPA_c15070 dacB1; D-alanyl-D-alanine carboxypeptidase DacB K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLPA_c04100 clpP1; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CLPA_c26780 clpP2; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CLPA_c40700 lon4; Lon protease 2 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CLPA_c26750 lon1; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CLPA_c34160 lon2; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CLPA_c26760 lon3; Lon protease 2 K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53]
D CLPA_c19590 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CLPA_c18010 transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D CLPA_c00960 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLPA_c09170 lepB1; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLPA_c20650 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLPA_c21750 signal peptidase I, bacterial type K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLPA_c08520 lepB2; putative signal peptidase I-2 K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLPA_c27830 ctpA; carboxy-terminal processing protease CtpA K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CLPA_c32170 hypothetical protein K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
D CLPA_c19170 spoIVB; SpoIVB peptidase K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D CLPA_c01120 LD-carboxypeptidase family protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CLPA_c34740 phage prohead protease HK97 family protein K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D CLPA_c16880 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D CLPA_c21400 peptidase, U32 family protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:cpat01003]
D CLPA_c02520 ugtP1; processive diacylglycerol beta-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CLPA_c32970 ugtP2; processive diacylglycerol beta-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CLPA_c16160 glycosyltransferase K16150 K16150; glycogen synthase [EC:2.4.1.11]
D CLPA_c21740 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D CLPA_c17280 pbpA1; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLPA_c17140 tagA; putative N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D CLPA_c35730 tagO; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CLPA_c03870 sacB1; levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D CLPA_c05690 sacB2; levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D CLPA_c06780 sacB3; levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D CLPA_c10840 lsc; levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D CLPA_c12380 ndvB; protein NdvB K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
D CLPA_c06550 glycosyltransferase K13658 gumI; beta-1,4-mannosyltransferase [EC:2.4.1.251]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cpat01005]
D CLPA_c15740 gmhB; D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D CLPA_c06670 glycosyltransferase K12996 rgpA; rhamnosyltransferase [EC:2.4.1.-]
D CLPA_c02300 glycosyl transferase, group 2 family protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D CLPA_c16970 hypothetical protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D CLPA_c17100 glycosyltransferase involved in cell wall biogenesis K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D CLPA_c35730 tagO; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cpat01011]
D CLPA_c39260 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLPA_c35600 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLPA_c27740 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CLPA_c37550 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CLPA_c37180 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CLPA_c18550 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 1 K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CLPA_c02540 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLPA_c27910 alr1; alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1]
D CLPA_c37990 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CLPA_c01120 LD-carboxypeptidase family protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CLPA_c18570 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLPA_c17460 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CLPA_c13720 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLPA_c09800 uppP2; undecaprenyl-diphosphatase 2 K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLPA_c37840 PA-phosphatase-like phosphoesterase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLPA_c17280 pbpA1; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLPA_c23580 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CLPA_c35810 spoVD2; stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CLPA_c18540 spoVD1; stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CLPA_c00970 pbpC; penicillin-binding protein 3 K21467 pbpC; penicillin-binding protein 3
D CLPA_c27770 pbpA2; penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D CLPA_c19310 dacF; D-alanyl-D-alanine carboxypeptidase DacF K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLPA_c19360 dacB2; D-alanyl-D-alanine carboxypeptidase DacB K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLPA_c23280 dacB3; D-alanyl-D-alanine carboxypeptidase DacB K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLPA_c15070 dacB1; D-alanyl-D-alanine carboxypeptidase DacB K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLPA_c06480 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLPA_c01310 putative endopeptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLPA_c01300 iap; putative endopeptidase p60 K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLPA_c25240 protein P54 K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLPA_c25190 protein P54 K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLPA_c21170 sortase B K08600 srtB; sortase B [EC:3.4.22.71]
D CLPA_c02260 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D CLPA_c24620 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CLPA_c21420 conserved hypothetical protein, YceG family K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CLPA_c13240 sleB1; spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CLPA_c35590 spoIID; stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D CLPA_c06800 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLPA_c40180 lyc4; autolytic lysozyme K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLPA_c36360 cwlD; germination-specific N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLPA_c34570 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cpat01004]
D CLPA_c39610 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CLPA_c39630 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CLPA_c39590 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CLPA_c09330 fabG1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLPA_c26590 fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLPA_c39600 fabG4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLPA_c39570 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CLPA_c39620 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CLPA_c16150 ccel; putative reductase Ccel K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D CLPA_c19600 esterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D CLPA_c20790 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CLPA_c14660 plsC; putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLPA_c13270 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:cpat01008]
D CLPA_c31420 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:cpat01006]
D CLPA_c19100 farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CLPA_c20470 uppS2; isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLPA_c16300 uppS1; isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLPA_c19540 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CLPA_c25410 menA; putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:cpat01007]
D CLPA_c14980 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CLPA_c12780 tyrS1; tyrosine--tRNA ligase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLPA_c12410 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CLPA_c36980 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CLPA_c15790 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CLPA_c01650 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CLPA_c01930 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CLPA_c16440 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CLPA_c12870 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLPA_c37210 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CLPA_c22160 aspS2; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLPA_c38050 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CLPA_c01800 aspS1; aspartate--tRNA(Asp/Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D CLPA_c22170 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CLPA_c37190 glyQS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLPA_c00200 serS1; serine--tRNA ligase 1 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLPA_c13990 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLPA_c16750 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CLPA_c22100 alaXL; alanyl-tRNA editing protein AlaX-L K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLPA_c21490 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLPA_c16800 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CLPA_c16810 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CLPA_c20210 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLPA_c29510 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLPA_c21120 dapL2; LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D CLPA_c16570 putative aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D CLPA_c31540 patA; putative N-acetyl-LL-diaminopimelate aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D CLPA_c33010 aspartate aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D CLPA_c32640 hisC1; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLPA_c33620 hisC2; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLPA_c13060 patB; cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLPA_c16500 argD2; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CLPA_c04980 argD1; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CLPA_c11830 gabT1; putative 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CLPA_c39030 puuE; 4-aminobutyrate aminotransferase PuuE K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D CLPA_c07840 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CLPA_c35160 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CLPA_c39290 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLPA_c17530 putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450 [BR:cpat00199]
D CLPA_c32420 cypC; fatty-acid peroxygenase K15629 CYP152A; fatty-acid peroxygenase [EC:1.11.2.4]
C 00194 Photosynthesis proteins [BR:cpat00194]
D CLPA_c35620 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CLPA_c35630 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CLPA_c35640 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CLPA_c35650 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CLPA_c35660 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CLPA_c35670 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CLPA_c35680 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CLPA_c35690 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CLPA_c35700 ATP synthase I chain K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cpat03000]
D CLPA_c05910 bepIM; modification methylase BepI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CLPA_c31270 hypothetical protein K13653 K13653; AraC family transcriptional regulator
D CLPA_c03230 cysL; HTH-type transcriptional regulator CysL K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D CLPA_c36310 transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CLPA_c05700 glpR; glycerol-3-phosphate regulon repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CLPA_c40600 spoIIID2; stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D CLPA_c35560 spoIIID1; stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D CLPA_c10890 iolR; HTH-type transcriptional regulator IolR K06608 iolR; DeoR family transcriptional regulator, myo-inositol catabolism operon repressor
D CLPA_c12350 DeoR family transcriptional regulator K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
D CLPA_c12360 glcR; HTH-type transcriptional repressor GlcR K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
D CLPA_c22940 ccpN; transcriptional repressor CcpN K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D CLPA_c31390 ccpA1; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CLPA_c31960 ccpA2; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CLPA_c01940 regA; HTH-type transcriptional regulator RegA K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CLPA_c27100 degA; HTH-type transcriptional regulator DegA K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CLPA_c34260 rbsR2; ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CLPA_c05660 ganR; HTH-type transcriptional regulator GanR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CLPA_c31630 rbsR1; ribose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D CLPA_c03680 treR; trehalose operon transcriptional repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D CLPA_c14940 transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CLPA_c40120 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CLPA_c04310 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CLPA_c30690 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D CLPA_c29760 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
D CLPA_c04200 transcriptional regulator, TetR family K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D CLPA_c14730 asnC; regulatory protein AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D CLPA_c05050 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CLPA_c39990 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CLPA_c01840 transcriptional regulator K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D CLPA_c09680 MarR family transcriptional regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D CLPA_c03580 transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CLPA_c21450 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CLPA_c32220 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CLPA_c05360 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CLPA_c26700 perR; transcriptional regulator PerR K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D CLPA_c40150 kdgR; transcriptional regulator KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D CLPA_c30120 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D CLPA_c35880 CRP/FNR family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLPA_c16190 cymR1; HTH-type transcriptional regulator CymR K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D CLPA_c21550 cymR2; HTH-type transcriptional regulator CymR K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D CLPA_c04870 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CLPA_c04950 arsR; arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CLPA_c24810 ziaR; transcriptional repressor SmtB K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D CLPA_c05810 PadR-like family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D CLPA_c38940 hypothetical protein X K10947 K10947; PadR family transcriptional regulator
D CLPA_c05110 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D CLPA_c21680 mntR; transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D CLPA_c31970 glvR1; HTH-type transcriptional regulator GlvR K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator
D CLPA_c31980 glvR2; HTH-type transcriptional regulator GlvR K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator
D CLPA_c26320 birA; bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CLPA_c37540 purR; Pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D CLPA_c31840 levR2; transcriptional regulatory protein LevR K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
D CLPA_c19640 stc2; signal-transduction and transcriptional-control protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLPA_c10550 stc1; signal-transduction and transcriptional-control protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLPA_c02760 stc4; signal-transduction and transcriptional-control protein Stc K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLPA_c22020 molybdopterin-binding protein K02019 modE; molybdate transport system regulatory protein
D CLPA_c28640 rex; redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D CLPA_c20520 codY; GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D CLPA_c22550 putative transcriptional regulator K07727 K07727; putative transcriptional regulator
D CLPA_c03890 XRE family transcriptional regulator K07729 K07729; putative transcriptional regulator
D CLPA_c25660 putative transcriptional regulator K07729 K07729; putative transcriptional regulator
D CLPA_c27900 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D CLPA_c29840 licT2; transcription antiterminator LicT K03488 licT; beta-glucoside operon transcriptional antiterminator
D CLPA_c05610 licT1; transcription antiterminator LicT K03488 licT; beta-glucoside operon transcriptional antiterminator
D CLPA_c17550 sacY; levansucrase and sucrase synthesis operon antiterminator K03480 glcT; transcriptional antiterminator
D CLPA_c28830 mtlR; transcriptional regulator MtlR K03483 mtlR; mannitol operon transcriptional activator
D CLPA_c11370 polyferredoxin K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D CLPA_c33980 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CLPA_c32330 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CLPA_c01320 hypothetical protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D CLPA_c39870 AbrB family transcriptional regulator K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D CLPA_c37440 spoVT; stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D CLPA_c40890 spo0J; stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLPA_c40910 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLPA_c37010 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D CLPA_c29720 glycerol-3-phosphate responsive antiterminator GlpP K02443 glpP; glycerol uptake operon antiterminator
D CLPA_c19150 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D CLPA_c23140 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D CLPA_c33340 thiE2; thiamine-phosphate synthase K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D CLPA_c37080 ctsR; transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D CLPA_c28210 cggR; central glycolytic genes regulator K05311 cggR; central glycolytic genes regulator
D CLPA_c18710 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CLPA_c21290 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D CLPA_c18510 mraZ; transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cpat03021]
D CLPA_c21580 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D CLPA_c36460 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CLPA_c36830 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CLPA_c36820 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CLPA_c21080 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CLPA_c22890 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D CLPA_c31100 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLPA_c21310 sigG; RNA polymerase sigma-G factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLPA_c21320 sigE; RNA polymerase sigma-E factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLPA_c17260 sigF; RNA polymerase sigma-F factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLPA_c40590 sigK2; RNA polymerase sigma-28 factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLPA_c21380 sigK1; RNA polymerase sigma-28 factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLPA_c06860 RNA polymerase sigma factor, sigma-70 family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLPA_c36930 sigH; RNA polymerase sigma-H factor K27000 sigH; RNA polymerase sigma-H factor
D CLPA_c38410 sigI; RNA polymerase sigma factor SigI K03093 sigI; RNA polymerase sigma-I factor
D CLPA_c28220 rpoN; putative RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CLPA_c18340 whiG; RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA
D CLPA_c20400 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D CLPA_c19060 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D CLPA_c36880 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CLPA_c37220 greA1; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CLPA_c30290 greA2; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CLPA_c02610 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cpat03019]
D CLPA_c23380 rne; ribonuclease E/G-like protein K08301 rng; ribonuclease G [EC:3.1.26.-]
D CLPA_c20770 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CLPA_c21440 rnjA2; ribonuclease J1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CLPA_c04930 rnjA1; ribonuclease J1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CLPA_c20240 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CLPA_c28140 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CLPA_c21760 putative HD-superfamily hydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D CLPA_c16360 cshA1; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLPA_c32980 dbpA; ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLPA_c20110 cshA2; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLPA_c20100 recQ; putative ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CLPA_c28160 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLPA_c20310 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CLPA_c02610 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CLPA_c27660 pfkA1; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLPA_c23120 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLPA_c28520 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLPA_c19550 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D CLPA_c15780 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CLPA_c01330 tRNA nucleotidyltransferase/poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D CLPA_c17720 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D CLPA_c27720 nucleotide-binding protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:cpat03011]
D CLPA_c20510 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CLPA_c36690 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CLPA_c36470 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CLPA_c36580 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CLPA_c40830 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CLPA_c36790 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CLPA_c36610 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CLPA_c36390 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CLPA_c36760 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CLPA_c36480 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CLPA_c36800 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CLPA_c36490 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CLPA_c36620 rpsZ; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D CLPA_c20320 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CLPA_c20700 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CLPA_c36660 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CLPA_c40810 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CLPA_c36710 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CLPA_c23200 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CLPA_c23050 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D CLPA_c36860 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CLPA_c36720 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CLPA_c36750 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CLPA_c36740 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CLPA_c36630 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CLPA_c36600 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CLPA_c40710 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CLPA_c36850 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CLPA_c36870 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CLPA_c36840 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CLPA_c36400 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CLPA_c36650 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CLPA_c36560 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CLPA_c36680 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CLPA_c36450 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CLPA_c36590 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CLPA_c20660 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CLPA_c16780 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CLPA_c23370 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CLPA_c36700 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CLPA_c36730 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CLPA_c36640 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CLPA_c23350 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CLPA_c20940 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CLPA_c36670 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CLPA_c36570 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CLPA_c02620 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CLPA_c20800 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CLPA_c40990 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CLPA_c16770 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CLPA_c36500 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D CLPA_c16910 rplY1; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CLPA_c29670 rplY2; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CLPA_c36810 putative ribosomal protein L7Ae-like K07590 RP-L7A; large subunit ribosomal protein L7A
D CLPA_c00100 rrsA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c37110 rrsJ; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c00600 rrsC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c34320 rrsI; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c00510 rrsB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c00870 rrsE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c01090 rrsG; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c01030 rrsF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c00690 rrsD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c14590 rrsH; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c00080 rrfA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c01070 rrfG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c01010 rrfF; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c37150 rrfJ; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c00670 rrfD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c00490 rrfB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c00570 rrfC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c14570 rrfH; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c34340 rrfI; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c00850 rrfE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c00680 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c00590 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c37120 rrlJ; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c00860 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c00090 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c34330 rrlI; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c00500 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c01020 rrlF; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c01080 rrlG; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c14580 rrlH; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cpat03009]
D CLPA_c20770 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CLPA_c22970 era; GTPase Era K03595 era; GTPase
D CLPA_c23340 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-]
D CLPA_c20400 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D CLPA_c19060 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D CLPA_c36880 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CLPA_c13340 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D CLPA_c01730 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CLPA_c21020 rsmB; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CLPA_c20900 putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CLPA_c23080 rsmE; ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CLPA_c40920 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CLPA_c18520 rsmH; ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CLPA_c01290 rsmI; ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CLPA_c19130 putative rRNA methylase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CLPA_c36950 TrmH family RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CLPA_c39200 rlmH; ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D CLPA_c21010 rlmN; putative dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CLPA_c34520 cfr; ribosomal RNA large subunit methyltransferase Cfr K15632 cfr; 23S rRNA (adenine-C8)-methyltransferase [EC:2.1.1.224]
D CLPA_c27600 rumA2; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CLPA_c22620 rumA1; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CLPA_c19430 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CLPA_c15440 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D CLPA_c23290 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CLPA_c18700 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CLPA_c30280 rluF; ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D CLPA_c35100 rimI; putative ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CLPA_c00830 rimJ; ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D CLPA_c20680 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D CLPA_c20270 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D CLPA_c23090 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CLPA_c23380 rne; ribonuclease E/G-like protein K08301 rng; ribonuclease G [EC:3.1.26.-]
D CLPA_c21470 putative holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CLPA_c36970 mrnC; mini-ribonuclease 3 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D CLPA_c16360 cshA1; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLPA_c32980 dbpA; ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLPA_c20110 cshA2; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLPA_c20980 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CLPA_c21150 der; GTPase Der K03977 engA; GTPase
D CLPA_c20640 rbgA; ribosome biogenesis GTPase A K14540 rbgA; ribosome biogenesis GTPase A
D CLPA_c17300 hflX; GTPase HflX K03665 hflX; GTPase
D CLPA_c02690 sua; threonylcarbamoyl-AMP synthase Sua K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CLPA_c22200 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CLPA_c20360 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CLPA_c20410 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D CLPA_c00030 yaaA; S4 domain-containing protein YaaA K14761 rlbA; ribosome-associated protein
D CLPA_c23000 ybeY; putative rRNA maturation factor YbeY K07042 ybeY; probable rRNA maturation factor
D CLPA_c23330 RNA-binding protein, YhbY family K07574 yhbY; RNA-binding protein
D CLPA_c35380 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D CLPA_c18500 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D CLPA_c20810 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cpat03016]
D CLPA_c00900 metal-dependent hydrolase K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D CLPA_c39340 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D CLPA_c00990 cca; CCA-adding enzyme K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D CLPA_c04020 rtcB; RNA-splicing ligase RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D CLPA_c14980 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CLPA_c13990 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLPA_c01930 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CLPA_c12870 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLPA_c01650 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CLPA_c15790 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CLPA_c37210 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CLPA_c22160 aspS2; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLPA_c22100 alaXL; alanyl-tRNA editing protein AlaX-L K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLPA_c21490 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLPA_c38050 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CLPA_c37190 glyQS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLPA_c16750 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CLPA_c00200 serS1; serine--tRNA ligase 1 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLPA_c36980 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CLPA_c16440 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CLPA_c22170 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CLPA_c16800 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CLPA_c16810 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CLPA_c12780 tyrS1; tyrosine--tRNA ligase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLPA_c12410 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CLPA_c23060 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CLPA_c26630 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CLPA_c36410 truA1; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CLPA_c23820 truA2; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CLPA_c20340 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CLPA_c16210 iscS2; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLPA_c01340 iscS1; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLPA_c21540 iscS3; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLPA_c02690 sua; threonylcarbamoyl-AMP synthase Sua K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CLPA_c19540 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CLPA_c40940 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CLPA_c40930 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CLPA_c03100 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CLPA_c40980 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CLPA_c13450 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D CLPA_c01800 aspS1; aspartate--tRNA(Asp/Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D CLPA_c15630 Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D CLPA_c08360 hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D CLPA_c00360 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CLPA_c37230 dus1; putative tRNA-dihydrouridine synthase 1 K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D CLPA_c19510 miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CLPA_c23070 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D CLPA_c32390 type 12 methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D CLPA_c20670 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CLPA_c22870 trmK; tRNA (adenine(22)-N(1))-methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D CLPA_c28240 putative tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CLPA_c16790 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D CLPA_c16220 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CLPA_c33120 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D CLPA_c22300 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CLPA_c15720 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CLPA_c05390 queD; putative queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CLPA_c05400 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CLPA_c10010 4Fe-4S ferredoxin K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CLPA_c13260 queG; epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CLPA_c30190 Fe-S protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CLPA_c22290 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CLPA_c01350 thiI; putative tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D CLPA_c37280 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CLPA_c35090 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CLPA_c28710 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CLPA_c35080 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CLPA_c26150 tcdA; tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D CLPA_c20840 hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D CLPA_c28140 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CLPA_c20310 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cpat03012]
D CLPA_c20370 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CLPA_c38420 infC2; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CLPA_c16760 infC1; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CLPA_c28650 putative drug resistance ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CLPA_c20500 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D CLPA_c36770 tuf1; elongation factor Tu K02358 tuf; elongation factor Tu
D CLPA_c36900 tuf2; elongation factor Tu K02358 tuf; elongation factor Tu
D CLPA_c36780 fusA; elongation factor G K02355 fusA; elongation factor G
D CLPA_c02660 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CLPA_c20480 frr; ribosome-recycling factor K02838 frr; ribosome recycling factor
D CLPA_c02650 prmC; N(5)-glutamine S-adenosyl-L-methionine dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CLPA_c37470 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CLPA_c36510 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CLPA_c18960 efp; elongation factor P K02356 efp; elongation factor P
D CLPA_c35360 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D CLPA_c12450 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:cpat03110]
D CLPA_c27120 ClpA protein K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D CLPA_c14520 clpB; chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CLPA_c37050 clpC; negative regulator of genetic competence ClpC/MecB K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CLPA_c26770 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CLPA_c32840 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CLPA_c23120 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLPA_c28520 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLPA_c23110 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CLPA_c13010 DnaJ family molecular chaperone K03686 dnaJ; molecular chaperone DnaJ
D CLPA_c16640 hslO; 33 kDa chaperonin K04083 hslO; molecular chaperone Hsp33
D CLPA_c23130 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE
D CLPA_c40160 hsp18; 18 kDa heat shock protein K13993 HSP20; HSP20 family protein
D CLPA_c28530 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D CLPA_c16270 htrB1; serine protease Do-like HtrB K04771 degP; serine protease Do [EC:3.4.21.107]
D CLPA_c37480 htrB2; serine protease Do-like HtrB K04771 degP; serine protease Do [EC:3.4.21.107]
D CLPA_c32160 ftsH3; ATP-dependent zinc metalloprotease FtsH 1 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLPA_c37260 ftsH2; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLPA_c11930 ftsH1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLPA_c35690 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CLPA_c24300 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D CLPA_c07090 hypA1; hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D CLPA_c07100 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D CLPA_c03830 hypothetical protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D CLPA_c37980 ppiB; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CLPA_c37450 prsA; foldase protein PrsA K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D CLPA_c01000 cbf2; putative peptidyl-prolyl cis-trans isomerase Cbf2 K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D CLPA_c20030 trxA1; thioredoxin K03671 TXN; thioredoxin
D CLPA_c36170 trxA2; thioredoxin K03671 TXN; thioredoxin
D CLPA_c38090 rubredoxin K03676 grxC; glutaredoxin 3
C 04131 Membrane trafficking [BR:cpat04131]
D CLPA_c15110 ndkA1; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CLPA_c11730 hypothetical protein K07192 FLOT; flotillin
D CLPA_c04970 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CLPA_c28200 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLPA_c11240 gapA1; glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLPA_c29200 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CLPA_c27650 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLPA_c32840 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CLPA_c09930 major facilitator superfamily K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:cpat03051]
D CLPA_c32840 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:cpat03032]
D CLPA_c05910 bepIM; modification methylase BepI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CLPA_c37410 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CLPA_c00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CLPA_c40690 dnaC; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CLPA_c06870 phage DNA replication protein K02315 dnaC; DNA replication protein DnaC
D CLPA_c39690 dnaC1; DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC
D CLPA_c22900 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CLPA_c40820 ssb3; single-stranded DNA-binding protein 3 K03111 ssb; single-strand DNA-binding protein
D CLPA_c28690 ssb1; single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D CLPA_c27670 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLPA_c39190 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLPA_c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLPA_c23210 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLPA_c01190 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLPA_c00440 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLPA_c20630 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CLPA_c24640 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLPA_c13370 ligA1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLPA_c30880 mjaIIIM; modification methylase MjaIII K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CLPA_c00070 gyrA1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CLPA_c00060 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CLPA_c17410 gyrA2; DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CLPA_c17400 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CLPA_c20530 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CLPA_c02180 topB1; DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CLPA_c39530 topB2; DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cpat03036]
D CLPA_c05910 bepIM; modification methylase BepI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CLPA_c20770 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CLPA_c11730 hypothetical protein K07192 FLOT; flotillin
D CLPA_c37410 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CLPA_c00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CLPA_c19550 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D CLPA_c05050 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CLPA_c39990 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CLPA_c20740 smc; chromosome partition protein Smc K03529 smc; chromosome segregation protein
D CLPA_c19320 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D CLPA_c19330 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D CLPA_c21350 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CLPA_c37370 septum formation initiator K13052 divIC; cell division protein DivIC
D CLPA_c27850 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CLPA_c20280 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CLPA_c18530 hypothetical protein K03586 ftsL; cell division protein FtsL
D CLPA_c18590 divIB; cell division protein DivIB K03589 ftsQ; cell division protein FtsQ
D CLPA_c18580 spoVE; stage V sporulation protein E K03588 ftsW; cell division protein FtsW
D CLPA_c27840 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CLPA_c21340 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CLPA_c16820 hypothetical protein K09888 zapA; cell division protein ZapA
D CLPA_c06800 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLPA_c40180 lyc4; autolytic lysozyme K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLPA_c36360 cwlD; germination-specific N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLPA_c34570 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLPA_c39370 multidrug resistance efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D CLPA_c23450 minC; putative septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CLPA_c23440 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D CLPA_c23430 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D CLPA_c18660 cell-division initiation protein DivIVA K04074 divIVA; cell division initiation protein
D CLPA_c18640 sepF; cell division protein SepF K09772 sepF; cell division inhibitor SepF
D CLPA_c23610 mbl; MreB-like protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CLPA_c35550 mreB2; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CLPA_c11320 mreB1; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CLPA_c23600 mreC; cell shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D CLPA_c23590 mreD; Rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D CLPA_c26600 mrdB; Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D CLPA_c26610 ftsW; lipid II flippase FtsW K05837 rodA; rod shape determining protein RodA
D CLPA_c40900 soj; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CLPA_c24340 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D CLPA_c40890 spo0J; stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLPA_c40910 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLPA_c17410 gyrA2; DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CLPA_c17400 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CLPA_c40930 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CLPA_c40920 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CLPA_c25980 phage integrase family protein K04763 xerD; integrase/recombinase XerD
D CLPA_c19260 xerD2; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D CLPA_c35010 xerC3; tyrosine recombinase XerC K04763 xerD; integrase/recombinase XerD
D CLPA_c24350 putative tyrosine recombinase XerC-like K04763 xerD; integrase/recombinase XerD
D CLPA_c09450 tnpA3; transposase K04763 xerD; integrase/recombinase XerD
D CLPA_c19720 xerC1; tyrosine recombinase XerC K04763 xerD; integrase/recombinase XerD
D CLPA_c33050 tnpA2; transposase K04763 xerD; integrase/recombinase XerD
D CLPA_c28440 xerC2; tyrosine recombinase XerC K04763 xerD; integrase/recombinase XerD
D CLPA_c37420 MazG family protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D CLPA_c10680 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D CLPA_c26740 engB; putative GTP-binding protein EngB K03978 engB; GTP-binding protein
D CLPA_c27700 whiA; putative sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:cpat03400]
D CLPA_c04480 ogt; methylated-DNA--protein-cysteine methyltransferase, constitutive K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CLPA_c35950 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CLPA_c28550 putative N-glycosylase/DNA lyase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D CLPA_c13280 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CLPA_c21580 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D CLPA_c11690 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CLPA_c01630 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CLPA_c00540 uracil-DNA glycosylase family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CLPA_c21670 exeA11; exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CLPA_c04490 nfo; putative endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CLPA_c17450 recJ1; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLPA_c13370 ligA1; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLPA_c24640 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLPA_c27800 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D CLPA_c27810 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D CLPA_c39110 uvrC2; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D CLPA_c27750 uvrC1; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D CLPA_c17880 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLPA_c26300 helD3; helicase IV K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLPA_c08720 helD1; helicase IV K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLPA_c15360 rep; ATP-dependent DNA helicase Rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLPA_c11940 helD2; helicase IV K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLPA_c13360 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLPA_c36830 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CLPA_c36820 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CLPA_c36460 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CLPA_c21080 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CLPA_c37460 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CLPA_c19520 mutS3; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CLPA_c16890 mutS2; endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D CLPA_c31460 mutS5; endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D CLPA_c09560 mutS1; endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D CLPA_c19530 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D CLPA_c19080 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CLPA_c19090 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CLPA_c27670 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLPA_c39190 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLPA_c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLPA_c23210 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLPA_c01190 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLPA_c00440 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLPA_c40820 ssb3; single-stranded DNA-binding protein 3 K03111 ssb; single-strand DNA-binding protein
D CLPA_c28690 ssb1; single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D CLPA_c30880 mjaIIIM; modification methylase MjaIII K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CLPA_c35450 RecD/TraA family helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CLPA_c20250 recA; protein RecA K03553 recA; recombination protein RecA
D CLPA_c22320 ruvA; holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CLPA_c22310 ruvB; holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CLPA_c21060 priA1; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CLPA_c29800 sbcC; nuclease SbcCD subunit C K03546 sbcC; DNA repair protein SbcC/Rad50
D CLPA_c29810 sbcD; nuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D CLPA_c37040 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D CLPA_c00040 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CLPA_c20910 recG1; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLPA_c26510 recG2; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLPA_c04620 transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLPA_c22960 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CLPA_c00460 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CLPA_c19160 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CLPA_c22110 addA; ATP-dependent helicase/nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D CLPA_c22120 addB; ATP-dependent helicase/deoxyribonuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D CLPA_c26420 cas1; CRISPR-associated protein Cas1 1 K15342 cas1; CRISP-associated protein Cas1
D CLPA_c00070 gyrA1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CLPA_c00060 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CLPA_c20530 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CLPA_c37410 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CLPA_c20100 recQ; putative ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CLPA_c29190 dinB1; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CLPA_c30300 dinB2; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CLPA_c19590 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CLPA_c18010 transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D CLPA_c16390 recX; regulatory protein RecX K03565 recX; regulatory protein
D CLPA_c30750 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D CLPA_c16060 nrdJ; vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CLPA_c20350 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:cpat03029]
D CLPA_c20370 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CLPA_c38420 infC2; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CLPA_c16760 infC1; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CLPA_c20500 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D CLPA_c36770 tuf1; elongation factor Tu K02358 tuf; elongation factor Tu
D CLPA_c36900 tuf2; elongation factor Tu K02358 tuf; elongation factor Tu
D CLPA_c36780 fusA; elongation factor G K02355 fusA; elongation factor G
D CLPA_c38210 helicase domain-containing protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D CLPA_c22970 era; GTPase Era K03595 era; GTPase
D CLPA_c12780 tyrS1; tyrosine--tRNA ligase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLPA_c12870 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLPA_c22160 aspS2; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLPA_c37190 glyQS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLPA_c15790 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CLPA_c01820 gatA3; glutamyl-tRNA(Gln) amidotransferase subunit A 2 K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CLPA_c28890 gatA2; glutamyl-tRNA(Gln) amidotransferase subunit A 1 K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CLPA_c13400 gatA1; glutamyl-tRNA(Gln) amidotransferase subunit A 1 K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CLPA_c01830 gatB3; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B 2 K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CLPA_c28900 gatB2; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B 1 K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CLPA_c13410 gatB1; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B 1 K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CLPA_c01810 gatC4; glutamyl-tRNA(Gln) amidotransferase subunit C 2 K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CLPA_c28880 gatC3; glutamyl-tRNA(Gln) amidotransferase subunit C 1 K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CLPA_c13390 gatC2; glutamyl-tRNA(Gln) amidotransferase subunit C 1 K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CLPA_c40820 ssb3; single-stranded DNA-binding protein 3 K03111 ssb; single-strand DNA-binding protein
D CLPA_c28690 ssb1; single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D CLPA_c23120 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLPA_c23130 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE
D CLPA_c28520 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLPA_c28530 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D CLPA_c23110 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CLPA_c13010 DnaJ family molecular chaperone K03686 dnaJ; molecular chaperone DnaJ
D CLPA_c16210 iscS2; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLPA_c01340 iscS1; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLPA_c21540 iscS3; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLPA_c03750 membrane protein insertase, YidC/Oxa1 family protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLPA_c40960 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLPA_c32840 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cpat02000]
D CLPA_c37560 ABC-type multidrug transport system, ATPase and permease component K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLPA_c37570 ABC-type multidrug transport system, ATPase and permease component K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLPA_c11410 putative ABC transporter ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLPA_c33300 ABC-type multidrug transport system, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLPA_c03010 ABC-type multidrug transport system, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLPA_c03020 ABC transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLPA_c33290 ABC-type multidrug transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLPA_c11420 ABC transporter, ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLPA_c26940 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CLPA_c19870 spaT; subtilin transport ATP-binding protein SpaT K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CLPA_c02020 lagD; lactococcin-G-processing and transport ATP-binding protein LagD K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D CLPA_c29850 ABC transporter K18231 msr; macrolide transport system ATP-binding/permease protein
D CLPA_c34530 expZ; nucleotide-binding protein ExpZ K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D CLPA_c26110 drug resistance ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D CLPA_c06910 ABC transporter ATP-binding/permease protein K21397 K21397; ABC transport system ATP-binding/permease protein
D CLPA_c04330 sbp; sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D CLPA_c04340 cysU; sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D CLPA_c04350 cysW; sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D CLPA_c04360 cysA; sulfate/thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D CLPA_c14400 modA; molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CLPA_c14410 nifC; putative transport system permease protein NifC K02018 modB; molybdate transport system permease protein
D CLPA_c31210 ssuA; putative aliphatic sulfonates-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D CLPA_c35240 ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein
D CLPA_c07000 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component K15553 ssuA; sulfonate transport system substrate-binding protein
D CLPA_c31240 ssuC2; putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein
D CLPA_c35220 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K15554 ssuC; sulfonate transport system permease protein
D CLPA_c07010 nrtB; nitrate transport permease protein NrtB K15554 ssuC; sulfonate transport system permease protein
D CLPA_c31230 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CLPA_c07020 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CLPA_c35230 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D CLPA_c25270 futA1; iron uptake protein A1 K02012 afuA; iron(III) transport system substrate-binding protein
D CLPA_c25260 fbpB; Fe(3+)-transport system permease protein FbpB 2 K02011 afuB; iron(III) transport system permease protein
D CLPA_c25250 potG; putrescine transport ATP-binding protein PotG K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CLPA_c21790 potD; spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CLPA_c21800 potC; spermidine/putrescine transport system permease protein PotC K11070 potC; spermidine/putrescine transport system permease protein
D CLPA_c21810 potB; spermidine/putrescine transport system permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D CLPA_c21820 potA; spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CLPA_c38220 opuCC; carnitine transport binding protein OpuCC K05845 opuC; osmoprotectant transport system substrate-binding protein
D CLPA_c38230 opuCA; carnitine transport ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CLPA_c15150 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CLPA_c01660 ABC-type anion transport system, duplicated permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CLPA_c20120 putative ABC transporter permease protein BAB2 K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CLPA_c33600 putative ABC transporter permease protein BAB2 K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CLPA_c33710 putative ABC transporter permease protein BAB2 K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CLPA_c22400 putative ABC transporter permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CLPA_c22410 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CLPA_c30260 ssuC1; putative aliphatic sulfonates transport permease protein SsuC K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CLPA_c15250 ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CLPA_c33700 nitrate/sulfonate/bicarbonate ABC transporter ATPase K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CLPA_c01670 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CLPA_c22390 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CLPA_c30270 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CLPA_c15240 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CLPA_c37900 msmX; maltodextrin import ATP-binding protein MsmX K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CLPA_c31620 ABC-type sugar transport system, periplasmic component K25086 musE; maltose transport system substrate-binding protein
D CLPA_c31610 amyD2; putative starch degradation products transport system permease protein AmyD K25087 musF; maltose transport system permease protein
D CLPA_c31600 amyC; putative starch degradation products transport system permease protein AmyC K25088 musG; maltose transport system permease protein
D CLPA_c18080 msmE1; multiple sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D CLPA_c31950 msmE2; multiple sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D CLPA_c18090 amyD1; putative starch degradation products transport system permease protein AmyD K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D CLPA_c31940 amyD3; putative starch degradation products transport system permease protein AmyD K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D CLPA_c18100 msmG1; multiple sugar-binding transport system permease protein MsmG K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D CLPA_c31930 msmG2; multiple sugar-binding transport system permease protein MsmG K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D CLPA_c10770 mocB; putative rhizopine-binding protein K17213 K17213; inositol transport system substrate-binding protein
D CLPA_c34250 ABC-type sugar transport system, periplasmic component K10120 msmE; fructooligosaccharide transport system substrate-binding protein
D CLPA_c34240 ABC-type sugar transport system, permease component K10121 msmF; fructooligosaccharide transport system permease protein
D CLPA_c34230 araQ2; L-arabinose transport system permease protein AraQ K10122 msmG; fructooligosaccharide transport system permease protein
D CLPA_c05480 ugpB1; sn-glycerol-3-phosphate-binding periplasmic protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CLPA_c29690 ugpB2; sn-glycerol-3-phosphate-binding periplasmic protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D CLPA_c05460 ugpA1; sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CLPA_c29710 ugpA2; sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D CLPA_c05470 ugpE1; sn-glycerol-3-phosphate transport system permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CLPA_c29700 ugpE2; sn-glycerol-3-phosphate transport system permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D CLPA_c02770 purine-binding protein BAB2 K07335 bmpA; basic membrane protein A and related proteins
D CLPA_c02790 tsgB13; glucose ABC transporter permease protein TsgB13 K23535 nupB; general nucleoside transport system permease protein
D CLPA_c02800 tsgC13; putative glucose ABC transporter permease protein TsgC13 K23536 nupC; general nucleoside transport system permease protein
D CLPA_c02780 ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein
D CLPA_c32070 fetB; putative iron export permease protein FetB K02069 STAR2; UDP-glucose/iron transport system permease protein
D CLPA_c32080 fetA; putative iron export ATP-binding protein FetA K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D CLPA_c19860 ABC-type sugar transport system, periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CLPA_c05560 ABC-type sugar transport system, periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CLPA_c19840 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CLPA_c19820 ABC-type sugar transport system, permease component K02025 ABC.MS.P; multiple sugar transport system permease protein
D CLPA_c05570 ABC-type sugar transport system, permease component K02025 ABC.MS.P; multiple sugar transport system permease protein
D CLPA_c19810 ABC-type sugar transport system, permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D CLPA_c05580 araQ1; L-arabinose transport system permease protein AraQ K02026 ABC.MS.P1; multiple sugar transport system permease protein
D CLPA_c21240 pstS; phosphate-binding protein PstS 1 K02040 pstS; phosphate transport system substrate-binding protein
D CLPA_c21230 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D CLPA_c21220 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D CLPA_c21210 pstB; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CLPA_c11860 hisJ; histidine-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D CLPA_c06250 glnH; glutamine-binding periplasmic protein K10036 glnH; glutamine transport system substrate-binding protein
D CLPA_c11870 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family K10037 glnP; glutamine transport system permease protein
D CLPA_c06260 glnP1; glutamine transport system permease protein GlnP K10037 glnP; glutamine transport system permease protein
D CLPA_c11880 glnQ2; glutamine transport ATP-binding protein GlnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D CLPA_c06270 glnQ1; glutamine transport ATP-binding protein GlnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D CLPA_c39420 peb1A; major cell-binding factor K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D CLPA_c39400 glnP2; putative glutamine ABC transporter permease protein GlnP K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D CLPA_c39410 glnM; putative glutamine ABC transporter permease protein GlnM K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D CLPA_c39430 glnQ3; glutamine transport ATP-binding protein GlnQ K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D CLPA_c29610 metQ; putative D-methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein
D CLPA_c29590 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D CLPA_c29600 metN2; methionine import ATP-binding protein MetN 2 K02071 metN; D-methionine transport system ATP-binding protein
D CLPA_c10540 oppA; oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D CLPA_c13420 ABC-type oligopeptide transport system, periplasmic component K15580 oppA; oligopeptide transport system substrate-binding protein
D CLPA_c10500 oppB; oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D CLPA_c10510 oppC; oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D CLPA_c10520 oppD; oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D CLPA_c10530 appF; oligopeptide transport ATP-binding protein AppF K10823 oppF; oligopeptide transport system ATP-binding protein
D CLPA_c35850 ABC-type Fe3+-hydroxamate transport system, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLPA_c12310 ABC-type Fe3+-hydroxamate transport system, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLPA_c22010 ABC-type Fe3+-hydroxamate transport system, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLPA_c14210 ABC-type Fe3+-hydroxamate transport system, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLPA_c23720 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLPA_c35830 putative ABC transporter permease protein HI K02015 ABC.FEV.P; iron complex transport system permease protein
D CLPA_c12290 ABC-type Fe3+-siderophore transport system, permease component K02015 ABC.FEV.P; iron complex transport system permease protein
D CLPA_c14310 putative ABC transporter permease protein HI K02015 ABC.FEV.P; iron complex transport system permease protein
D CLPA_c35840 ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CLPA_c12300 ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CLPA_c39450 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D CLPA_c35760 putative metal transport system membrane protein TP K09816 znuB; zinc transport system permease protein
D CLPA_c35750 putative metal transport system ATP-binding protein TP K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CLPA_c12480 cbiN; cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D CLPA_c12490 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D CLPA_c12470 cbiM; cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CLPA_c12500 putative ABC transporter ATP-binding protein MA K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D CLPA_c00980 hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D CLPA_c07820 bioY; putative biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D CLPA_c36420 ecfT; energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D CLPA_c36440 ecfA1; energy-coupling factor transporter ATP-binding protein EcfA1 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLPA_c36430 ecfA2; energy-coupling factor transporter ATP-binding protein EcfA2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLPA_c35060 ABC-type metal ion transport system, periplasmic component/surface adhesin K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D CLPA_c17060 rfbA; O-antigen export system permease protein RfbA K09690 wzm; homopolymeric O-antigen transport system permease protein
D CLPA_c08490 natB; protein NatB K09696 natB; sodium transport system permease protein
D CLPA_c08480 natA1; ATP-binding transport protein NatA K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D CLPA_c04230 lantibiotic protection ABC transporter permease subunit, MutE/EpiE family K20491 nisE; lantibiotic transport system permease protein
D CLPA_c04240 lantibiotic protection ABC transporter permease subunit, MutG family K20492 nisG; lantibiotic transport system permease protein
D CLPA_c04220 srtF; lantibiotic transport ATP-binding protein SrtF K20490 nisF; lantibiotic transport system ATP-binding protein
D CLPA_c38690 ABC-2 family transporter protein K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D CLPA_c08790 ABC-2 family transporter protein K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D CLPA_c29210 ABC-type multidrug transport system, permease component K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D CLPA_c03930 ABC-2 family transporter protein K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D CLPA_c38700 ABC-2 family transporter protein K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D CLPA_c29220 ABC-type multidrug transport system, permease component K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D CLPA_c08780 ABC-type multidrug transport system, permease component K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D CLPA_c29230 ABC-type multidrug transport system, ATPase component K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D CLPA_c08770 hypothetical protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D CLPA_c03910 Fe(3+)-transporting ATPase K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D CLPA_c38710 ABC transporter, ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D CLPA_c10380 ABC transporter multidrug-family permease K19310 bcrB; bacitracin transport system permease protein
D CLPA_c10390 bcrA3; bacitracin transport ATP-binding protein BcrA K19309 bcrA; bacitracin transport system ATP-binding protein
D CLPA_c38580 permease K11632 bceB; bacitracin transport system permease protein
D CLPA_c38590 ABC-type antimicrobial peptide transport system, ATPase component K11631 bceA; bacitracin transport system ATP-binding protein
D CLPA_c29740 ABC transporter, permease protein K25147 berB; beta-exotoxin I transport system permease protein
D CLPA_c29730 ABC transporter, permease protein K25147 berB; beta-exotoxin I transport system permease protein
D CLPA_c29750 ABC-type multidrug transport system, ATPase component K25148 berA; beta-exotoxin I transport system ATP-binding protein
D CLPA_c09820 peptide ABC transporter permease K11636 yxdM; putative ABC transport system permease protein
D CLPA_c09810 peptide ABC transporter, Pep4E family, ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D CLPA_c07210 ABC transporter K09808 lolC_E; lipoprotein-releasing system permease protein
D CLPA_c07220 lolD2; lipoprotein-releasing system ATP-binding protein LolD 2 K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CLPA_c27840 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D CLPA_c27850 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CLPA_c10710 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLPA_c05210 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLPA_c10160 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLPA_c38900 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLPA_c23910 ABC-type polysaccharide/polyol phosphate export system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLPA_c15670 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLPA_c03920 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLPA_c04610 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLPA_c17070 rfbB; O-antigen export system ATP-binding protein RfbB K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLPA_c24970 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLPA_c05220 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLPA_c12950 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLPA_c37610 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLPA_c30340 bcrA4; bacitracin transport ATP-binding protein BcrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLPA_c10170 bcrA2; bacitracin transport ATP-binding protein BcrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLPA_c38890 nodI2; Nod factor export ATP-binding protein I K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLPA_c15680 natA2; ATP-binding transport protein NatA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLPA_c23920 nodI1; Nod factor export ATP-binding protein I K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLPA_c37790 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLPA_c04600 bcrA1; bacitracin transport ATP-binding protein BcrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLPA_c38470 polyamine-transporting ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLPA_c11130 ecsA; ABC-type transporter ATP-binding protein EcsA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLPA_c32100 ABC transporter ATP-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLPA_c39390 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CLPA_c38760 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CLPA_c28000 MacB-like periplasmic core domain-containing protein/FtsX-like permease family K02004 ABC.CD.P; putative ABC transport system permease protein
D CLPA_c37740 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CLPA_c00220 MacB-like periplasmic core domain/FtsX-like permease family K02004 ABC.CD.P; putative ABC transport system permease protein
D CLPA_c15310 macB2; macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D CLPA_c09910 ABC-type transport system permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D CLPA_c02290 macB1; macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D CLPA_c31180 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLPA_c19790 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLPA_c24920 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLPA_c24910 macB3; macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLPA_c32110 lolD1; lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLPA_c39380 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLPA_c38770 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLPA_c28010 macB4; macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLPA_c37750 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLPA_c00230 ABC transporter ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLPA_c15300 macB5; macrolide export ATP-binding/permease protein MacB 2 K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLPA_c02280 hypothetical protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLPA_c31170 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLPA_c38390 sufC; vegetative protein 296 K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CLPA_c01850 mepA; multidrug export protein MepA K18908 mepA; MATE family, multidrug efflux pump
D CLPA_c33160 putative efflux protein, MATE family K26939 norM; MATE family, multidrug efflux pump
D CLPA_c11470 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D CLPA_c31650 lacY; lactose permease K02532 lacY; MFS transporter, OHS family, lactose permease
D CLPA_c08700 tetA; tetracycline resistance protein, class C K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D CLPA_c38870 bcr; bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D CLPA_c08870 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D CLPA_c03500 mdtG1; multidrug resistance protein MdtG K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D CLPA_c05500 mdtG2; multidrug resistance protein MdtG K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D CLPA_c30200 mefA; macrolide efflux protein A K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D CLPA_c02840 sugar phosphate permease K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D CLPA_c05250 major facilitator superfamily transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D CLPA_c09930 major facilitator superfamily K06902 UMF1; MFS transporter, UMF1 family
D CLPA_c02910 naiP1; putative niacin/nicotinamide transporter NaiP K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D CLPA_c02920 naiP2; putative niacin/nicotinamide transporter NaiP K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D CLPA_c36290 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CLPA_c20190 hpr; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D CLPA_c20200 crr2; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLPA_c18920 ptsG2; PTS system glucose-specific EIICBA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLPA_c01230 crr1; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLPA_c32550 PTS system glucose subfamily transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLPA_c17380 ptsG1; PTS system glucose-specific EIICBA component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLPA_c29830 scrA; PTS system sucrose-specific EIIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CLPA_c05600 bglP; PTS system beta-glucoside-specific EIIBCA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CLPA_c03700 treP; PTS system trehalose-specific EIIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D CLPA_c18890 aglA; PTS system alpha-glucoside-specific EIICB component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D CLPA_c32010 malP; PTS system maltose-specific EIICB component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D CLPA_c39140 fruA2; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CLPA_c39910 fruA3; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D CLPA_c28820 mtlF; mannitol-specific phosphotransferase enzyme IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D CLPA_c28840 mtlA; PTS system mannitol-specific EIICB component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D CLPA_c28750 PTS system, glucitol/sorbitol-specific, IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D CLPA_c28760 srlE; glucitol/sorbitol-specific phosphotransferase enzyme IIB component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CLPA_c28770 srlA; glucitol/sorbitol permease IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D CLPA_c05960 PTS system galactitol specific transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D CLPA_c05970 PTS system, lactose/cellobiose specific IIB subunit K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D CLPA_c05980 galactitol permease IIC component K02775 gatC; galactitol PTS system EIIC component
D CLPA_c36240 manX1; PTS system mannose-specific EIIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D CLPA_c36260 manX2; PTS system mannose-specific EIIAB component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CLPA_c31870 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC K02795 manY; mannose PTS system EIIC component
D CLPA_c36230 sorA2; sorbose permease IIC component K02795 manY; mannose PTS system EIIC component
D CLPA_c31860 manZ1; mannose permease IID component K02796 manZ; mannose PTS system EIID component
D CLPA_c36220 manZ2; mannose permease IID component K02796 manZ; mannose PTS system EIID component
D CLPA_c31890 phosphotransferase system, mannose/fructose-specific component IIA K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D CLPA_c29000 PTS system, mannose/fructose/sorbose family, IIA component K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206]
D CLPA_c28990 sorB; sorbose-specific phosphotransferase enzyme IIB component K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206]
D CLPA_c28980 sorA1; sorbose permease IIC component K02814 sorA; sorbose PTS system EIIC component
D CLPA_c28970 sorM; sorbose permease IID component K02815 sorM; sorbose PTS system EIID component
D CLPA_c08170 PTS system IIA component, L-Asc family K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CLPA_c08200 PTS system IIB component, L-Asc family K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CLPA_c08180 ulaA; ascorbate-specific permease IIC component UlaA K03475 ulaA; ascorbate PTS system EIIC component
D CLPA_c12170 glpF; putative glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D CLPA_c33860 nrgA; ammonium transporter NrgA K03320 amt; ammonium transporter, Amt family
D CLPA_c32140 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D CLPA_c40850 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D CLPA_c40780 magnesium transporter MgtE K06213 mgtE; magnesium transporter
D CLPA_c01240 motA; motility protein A K02556 motA; chemotaxis protein MotA
D CLPA_c01250 motB; motility protein B K02557 motB; chemotaxis protein MotB
D CLPA_c35780 corA; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D CLPA_c09980 Mg2+ and Co2+ transporter K03284 corA; magnesium transporter
D CLPA_c24680 crcB; putative fluoride ion transporter CrcB 2 K06199 crcB; fluoride exporter
D CLPA_c24690 hypothetical protein K06199 crcB; fluoride exporter
D CLPA_c26080 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CLPA_c39120 HlyC/CorC family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CLPA_c07640 hypothetical protein K11934 ompX; outer membrane protein X
D CLPA_c06890 hypothetical protein K12678 aidA-I; autotransporter family porin
D CLPA_c40200 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D CLPA_c31320 lrgA2; antiholin-like protein LrgA K05338 lrgA; holin-like protein
D CLPA_c01270 lrgA1; putative effector of murein hydrolase LrgA K06518 cidA; holin-like protein
D CLPA_c05670 lacS; lactose permease K16209 lacS; lactose/raffinose/galactose permease
D CLPA_c27270 D-serine/D-alanine/glycine:proton symporter, AAT family K11737 cycA; D-serine/D-alanine/glycine transporter
D CLPA_c29930 ethanolamine:proton symporter, EAT family K16238 eat; ethanolamine permease
D CLPA_c06160 spore germination protein K06296 gerKB; spore germination protein KB
D CLPA_c06240 gerKB1; spore germination protein KB K06296 gerKB; spore germination protein KB
D CLPA_c32020 gerKB3; spore germination protein KB K06296 gerKB; spore germination protein KB
D CLPA_c10870 gerKB2; spore germination protein KB K06296 gerKB; spore germination protein KB
D CLPA_c02680 ZIP transporter family protein K07238 TC.ZIP; zinc transporter, ZIP family
D CLPA_c08060 hypothetical protein K05786 rarD; chloramphenicol-sensitive protein RarD
D CLPA_c39320 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLPA_c12700 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D CLPA_c40090 idnT; Gnt-II system L-idonate transporter K06157 idnT; Gnt-II system L-idonate transporter
D CLPA_c40110 gntT; high-affinity gluconate transporter K06155 gntT; Gnt-I system high-affinity gluconate transporter
D CLPA_c04070 kdgT2; 2-keto-3-deoxygluconate permease 2 K02526 kdgT; 2-keto-3-deoxygluconate permease
D CLPA_c23810 lctP; L-lactate permease K03303 lutP; lactate permease
D CLPA_c08390 chaA; Ca(2+)/H(+) antiporter ChaA K07300 chaA; Ca2+:H+ antiporter
D CLPA_c10630 gltT; proton/sodium-glutamate symport protein K11102 gltP; proton glutamate symport protein
D CLPA_c28380 gerN; Na(+)/H(+)-K(+) antiporter GerN K26730 napA; Na+:H+ antiporter
D CLPA_c31370 ktrB; Ktr system potassium uptake protein B K03498 trkH; trk/ktr system potassium uptake protein
D CLPA_c31360 ktrC; Ktr system potassium uptake protein C K03499 trkA; trk/ktr system potassium uptake protein
D CLPA_c22720 permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D CLPA_c09100 eriC; chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family
D CLPA_c06120 nixA1; high-affinity nickel-transport protein NixA K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D CLPA_c20080 sulfate permease, SulP family protein K03321 TC.SULP; sulfate permease, SulP family
D CLPA_c02740 mntH1; divalent metal cation transporter MntH K03322 mntH; manganese transport protein
D CLPA_c04970 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D CLPA_c04880 arsB; arsenite resistance protein ArsB K03325 ACR3; arsenite transporter
D CLPA_c15460 spoVB2; stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D CLPA_c10040 hypothetical protein K06409 spoVB; stage V sporulation protein B
D CLPA_c37430 spoVB3; stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D CLPA_c08040 permease K24180 mleP; malate permease and related proteins
D CLPA_c23740 putative permease K24180 mleP; malate permease and related proteins
D CLPA_c31560 permease K24180 mleP; malate permease and related proteins
D CLPA_c34450 lysine exporter protein LysE/YggA K11249 eamB; cysteine/O-acetylserine efflux protein
D CLPA_c35110 ribU; riboflavin transporter RibU K23675 fmnP; riboflavin transporter
D CLPA_c26130 yuaJ; putative proton-coupled thiamine transporter YuaJ K16789 thiT; thiamine transporter
D CLPA_c15530 hypothetical protein K16788 niaX; niacin transporter
D CLPA_c03210 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D CLPA_c18580 spoVE; stage V sporulation protein E K03588 ftsW; cell division protein FtsW
D CLPA_c32230 mntP; putative manganese efflux pump MntP K23242 mntP; manganese efflux pump family protein
D CLPA_c39370 multidrug resistance efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D CLPA_c02040 multidrug resistance efflux pump K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D CLPA_c06650 capsular exopolysaccharide family protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D CLPA_c06640 capsular polysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator
D CLPA_c05320 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A
D CLPA_c05330 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A
D CLPA_c13760 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A
D CLPA_c13880 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D CLPA_c05340 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CLPA_c13770 feoB2; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CLPA_c13870 feoB1; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CLPA_c26330 tryptophan-rich sensory protein K05770 TSPO; translocator protein
D CLPA_c21900 hypothetical protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:cpat02044]
D CLPA_c14930 type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CLPA_c18810 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D CLPA_c14810 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA
D CLPA_c18790 epsE; type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D CLPA_c14790 xcpR; type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D CLPA_c14800 pilC; type 4 fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D CLPA_c18800 tapC; type IV pilus assembly protein TapC K02653 pilC; type IV pilus assembly protein PilC
D CLPA_c14820 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D CLPA_c18870 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D CLPA_c14830 pilN; Tfp pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D CLPA_c14840 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D CLPA_c21370 pilT; twitching mobility protein K02669 pilT; twitching motility protein PilT
D CLPA_c23270 competence ComEA-like protein K02237 comEA; competence protein ComEA
D CLPA_c35740 cytidine/deoxycytidylate deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CLPA_c14650 comEC; ComE operon protein 3 K02238 comEC; competence protein ComEC
D CLPA_c23220 ComEC/Rec2 family protein K02238 comEC; competence protein ComEC
D CLPA_c35430 putative amidophosphoribosyltransferase K02242 comFC; competence protein ComFC
D CLPA_c18300 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CLPA_c12800 fhlB; flagellar protein FhlB K04061 flhB2; flagellar biosynthesis protein
D CLPA_c18150 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D CLPA_c18170 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D CLPA_c18180 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CLPA_c17660 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D CLPA_c18260 fliZ; flagellar biosynthesis protein FliZ K02418 fliO; flagellar protein FliO/FliZ
D CLPA_c18270 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CLPA_c18280 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CLPA_c18290 flhB; flagellar biosynthetic protein FlhB K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB
D CLPA_c06890 hypothetical protein K12678 aidA-I; autotransporter family porin
D CLPA_c35370 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLPA_c24300 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB
D CLPA_c22240 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CLPA_c36890 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CLPA_c22230 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CLPA_c28150 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CLPA_c36550 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CLPA_c20710 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLPA_c20730 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D CLPA_c22280 protein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CLPA_c03750 membrane protein insertase, YidC/Oxa1 family protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLPA_c40960 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLPA_c07110 tatA; putative twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D CLPA_c34060 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D CLPA_c34050 Sec-independent protein secretion pathway component K03117 tatB; sec-independent protein translocase protein TatB
D CLPA_c07120 tatC1; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D CLPA_c07130 tatC2; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D CLPA_c34100 tatC3; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:cpat02042]
D CLPA_c26080 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CLPA_c39120 HlyC/CorC family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CLPA_c24700 hypothetical protein UPF0073 K11068 hlyIII; hemolysin III
D CLPA_c15500 putative phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:cpat02022]
D CLPA_c21260 phoR4; alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLPA_c29530 resE7; sensor histidine kinase ResE K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLPA_c21270 phoP1; alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLPA_c24960 phoP2; alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLPA_c29520 phoP3; alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLPA_c13890 walR2; transcriptional regulatory protein WalR K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLPA_c02200 cssS; sensor histidine kinase CssS K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D CLPA_c02190 cssR; transcriptional regulatory protein CssR K07770 cssR; two-component system, OmpR family, response regulator CssR
D CLPA_c32350 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D CLPA_c32340 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D CLPA_c37500 srrA2; transcriptional regulatory protein SrrA K07775 resD; two-component system, OmpR family, response regulator ResD
D CLPA_c38610 Two-component response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D CLPA_c09790 sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D CLPA_c09780 DNA-binding response regulator K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ
D CLPA_c30360 dltS; sensor protein DltS K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D CLPA_c16260 resE4; sensor histidine kinase ResE K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLPA_c29300 arlS; signal transduction histidine-protein kinase ArlS K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D CLPA_c29290 arlR2; response regulator ArlR K18941 arlR; two-component system, OmpR family, response regulator ArlR
D CLPA_c04260 integral membrane sensor signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLPA_c04250 spaR; transcriptional regulatory protein SpaR K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLPA_c13210 phoR3; alkaline phosphatase synthesis sensor protein PhoR K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CLPA_c13200 tcrX; putative transcriptional regulatory protein TcrX K02483 K02483; two-component system, OmpR family, response regulator
D CLPA_c03140 signal transduction histidine kinase K11623 ydfH; two-component system, NarL family, sensor histidine kinase YdfH [EC:2.7.13.3]
D CLPA_c03150 two component transcriptional regulator, LuxR family K11624 ydfI; two-component system, NarL family, response regulator YdfI
D CLPA_c19180 spo0A; stage 0 sporulation protein A-like protein K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CLPA_c19920 GHKL domain-containing protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLPA_c04670 sensor histidine kinase-like protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLPA_c12980 GHKL domain-containing protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLPA_c10700 agrA2; accessory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CLPA_c19980 agrA4; accessory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CLPA_c04660 agrA1; accessory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CLPA_c12990 agrA3; accessory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CLPA_c31340 putative regulator of cell autolysis K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CLPA_c28670 lytS; sensor protein LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CLPA_c28660 lytT; sensory transduction protein LytT K02477 K02477; two-component system, LytTR family, response regulator
D CLPA_c31330 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D CLPA_c17610 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLPA_c17630 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLPA_c17590 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CLPA_c10620 glnK; sensor histidine kinase GlnK K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D CLPA_c10610 glnL; transcriptional regulatory protein GlnL K07719 glnL; two-component system, response regulator GlnL
D CLPA_c22730 Two-component response regulator K07720 yesN; two-component system, response regulator YesN
D CLPA_c29950 pdtaS; putative sensor histidine kinase PdtaS K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D CLPA_c29960 pdtaR; putative transcriptional regulatory protein PdtaR K22010 pdtaR; two-component system, response regulator PdtaR
D CLPA_c10760 resE2; sensor histidine kinase ResE K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:cpat02035]
D CLPA_c17610 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLPA_c17570 cheW2; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLPA_c17640 cheW1; putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLPA_c17620 cheC; CheY-P phosphatase CheC K03410 cheC; chemotaxis protein CheC
D CLPA_c17580 cheD; putative chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D CLPA_c10790 cheR3; putative methyltransferase cher3 K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CLPA_c17600 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CLPA_c17590 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CLPA_c17630 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLPA_c36200 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c02130 tlpB1; methyl-accepting chemotaxis protein TlpB K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c12910 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c21250 mcpB; methyl-accepting chemotaxis protein McpB K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c14020 tlpC; methyl-accepting chemotaxis protein TlpC K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c06130 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c06190 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c06200 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c06220 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c06330 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c06810 mcp4; methyl-accepting chemotaxis protein 4 K03406 mcp; methyl-accepting chemotaxis protein
D CLPA_c18170 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D CLPA_c18180 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CLPA_c18190 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D CLPA_c18260 fliZ; flagellar biosynthesis protein FliZ K02418 fliO; flagellar protein FliO/FliZ
D CLPA_c18270 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CLPA_c18280 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CLPA_c18290 flhB; flagellar biosynthetic protein FlhB K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB
D CLPA_c18300 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CLPA_c18160 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CLPA_c17650 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CLPA_c17660 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D CLPA_c18150 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D CLPA_c18250 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D CLPA_c18140 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CLPA_c18200 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D CLPA_c18120 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CLPA_c18130 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CLPA_c18210 flgD; flagellar hook capping protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D CLPA_c18370 flgG2; flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D CLPA_c18380 flgG3; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D CLPA_c18230 flgG1; flagellar basal-body rod protein FlgG K02390 flgE; flagellar hook protein FlgE
D CLPA_c17690 flgK; flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D CLPA_c17700 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D CLPA_c17800 fla; flagellin K02406 fliC; flagellin
D CLPA_c18110 hag; flagellin K02406 fliC; flagellin
D CLPA_c17760 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D CLPA_c17750 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CLPA_c18340 whiG; RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA
D CLPA_c01240 motA; motility protein A K02556 motA; chemotaxis protein MotA
D CLPA_c01250 motB; motility protein B K02557 motB; chemotaxis protein MotB
D CLPA_c17710 fliW; flagellar assembly factor FliW K13626 fliW; flagellar assembly factor FliW
D CLPA_c17670 anti-sigma-28 factor, FlgM family K02398 flgM; negative regulator of flagellin synthesis FlgM
D CLPA_c17730 flaG; flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D CLPA_c18240 hypothetical protein K02385 flbD; flagellar protein FlbD
D CLPA_c18310 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D CLPA_c18320 ATPases involved in chromosome partitioning K04562 flhG; flagellar biosynthesis protein FlhG
D CLPA_c21370 pilT; twitching mobility protein K02669 pilT; twitching motility protein PilT
D CLPA_c18810 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D CLPA_c14810 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA
D CLPA_c18790 epsE; type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D CLPA_c14790 xcpR; type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D CLPA_c14800 pilC; type 4 fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D CLPA_c18800 tapC; type IV pilus assembly protein TapC K02653 pilC; type IV pilus assembly protein PilC
D CLPA_c14930 type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CLPA_c14840 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D CLPA_c18870 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D CLPA_c14830 pilN; Tfp pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D CLPA_c14820 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cpat04812]
D CLPA_c23610 mbl; MreB-like protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CLPA_c35550 mreB2; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CLPA_c11320 mreB1; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CLPA_c21340 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CLPA_c21350 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CLPA_c23450 minC; putative septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CLPA_c23440 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D CLPA_c23430 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D CLPA_c40900 soj; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CLPA_c24340 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D CLPA_c40890 spo0J; stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLPA_c40910 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cpat04147]
D CLPA_c32840 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CLPA_c28160 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLPA_c28200 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLPA_c11240 gapA1; glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLPA_c28190 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CLPA_c27650 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLPA_c39860 dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CLPA_c38080 putative peroxiredoxin in rubredoxin operon K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D CLPA_c11730 hypothetical protein K07192 FLOT; flotillin
D CLPA_c28520 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLPA_c23120 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLPA_c36040 pgi2; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLPA_c28800 pgi1; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLPA_c03190 guaB1; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CLPA_c28510 guaB2; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CLPA_c36770 tuf1; elongation factor Tu K02358 tuf; elongation factor Tu
D CLPA_c36900 tuf2; elongation factor Tu K02358 tuf; elongation factor Tu
D CLPA_c23060 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CLPA_c17540 ldh1; L-lactate dehydrogenase 1 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLPA_c27630 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLPA_c35710 thlA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c08620 thlA1; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLPA_c36540 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CLPA_c22210 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CLPA_c14700 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CLPA_c14690 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CLPA_c11080 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLPA_c03280 hyuA; D-phenylhydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLPA_c05680 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D CLPA_c38000 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLPA_c12510 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CLPA_c04900 phoA; alkaline phosphatase 4 K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CLPA_c31550 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLPA_c00180 hydroxypyruvate reductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLPA_c24730 purH2; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CLPA_c03710 purH1; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CLPA_c19680 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLPA_c15200 etfA2; electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D CLPA_c28600 etfA3; electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D CLPA_c28180 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CLPA_c29200 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:cpat02048]
D CLPA_c26420 cas1; CRISPR-associated protein Cas1 1 K15342 cas1; CRISP-associated protein Cas1
D CLPA_c26410 cas2; CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D CLPA_c26440 cas5; CRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D CLPA_c26430 cas3; CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D CLPA_c26480 hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D CLPA_c26470 hypothetical protein K19114 csh1; CRISPR-associated protein Csh1
D CLPA_c26460 hypothetical protein K19115 csh2; CRISPR-associated protein Csh2
D CLPA_c26450 CRISPR-associated protein Cas5, subtype I-B/HMARI K19116 cas5h; CRISPR-associated protein Cas5h
D CLPA_c28490 hsdR; type I restriction enzyme EcoAI R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CLPA_c28430 restriction modification system DNA specificity subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CLPA_c28470 hsdS; putative type I restriction enzyme specificity protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CLPA_c28480 hsdM; type I restriction enzyme EcoEI M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CLPA_c30880 mjaIIIM; modification methylase MjaIII K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CLPA_c17220 modification methylase family protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CLPA_c05910 bepIM; modification methylase BepI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D CLPA_c34790 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D CLPA_c30860 ndoA3; mRNA interferase NdoA K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D CLPA_c27890 ndoA2; mRNA interferase eNdoA K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D CLPA_c10230 PemK family protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D CLPA_c27900 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D CLPA_c07360 hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D CLPA_c25700 death on curing protein K07341 doc; death on curing protein
D CLPA_c25710 prevent-host-death protein K19165 phd; antitoxin Phd
D CLPA_c27090 hypothetical protein K19334 tabA; biofilm protein TabA
D CLPA_c21340 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CLPA_c23610 mbl; MreB-like protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CLPA_c35550 mreB2; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CLPA_c11320 mreB1; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CLPA_c17410 gyrA2; DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CLPA_c17400 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CLPA_c14980 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CLPA_c16210 iscS2; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLPA_c01340 iscS1; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLPA_c21540 iscS3; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:cpat01504]
D CLPA_c08700 tetA; tetracycline resistance protein, class C K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D CLPA_c34520 cfr; ribosomal RNA large subunit methyltransferase Cfr K15632 cfr; 23S rRNA (adenine-C8)-methyltransferase [EC:2.1.1.224]
D CLPA_c29850 ABC transporter K18231 msr; macrolide transport system ATP-binding/permease protein
D CLPA_c34530 expZ; nucleotide-binding protein ExpZ K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D CLPA_c30200 mefA; macrolide efflux protein A K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D CLPA_c09590 vat; virginiamycin A acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D CLPA_c10740 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CLPA_c16260 resE4; sensor histidine kinase ResE K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLPA_c39370 multidrug resistance efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D CLPA_c01840 transcriptional regulator K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D CLPA_c01850 mepA; multidrug export protein MepA K18908 mepA; MATE family, multidrug efflux pump
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cpat00537]
D CLPA_c04900 phoA; alkaline phosphatase 4 K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D CLPA_c39860 dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cpat03100]
D CLPA_c00120 trnA1; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLPA_c37160 trnA3; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLPA_c37140 trnA2; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLPA_c00740 trnR3; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLPA_c13580 trnR5; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLPA_c13500 trnR4; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLPA_c13670 trnR6; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLPA_c00260 trnR1; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLPA_c00350 trnR2; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLPA_c14600 trnN1; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLPA_c34310 trnN2; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLPA_c37200 trnN4; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLPA_c37100 trnN3; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLPA_c16660 trnD1; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLPA_c39710 trnD2; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLPA_c39750 trnD3; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLPA_c01110 trnC1; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CLPA_c16690 trnC2; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CLPA_c12880 trnQ1; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLPA_c13530 trnQ2; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLPA_c13600 trnQ3; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLPA_c00700 trnE1; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLPA_c39730 trnE3; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLPA_c39770 trnE4; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLPA_c26270 trnE2; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLPA_c00720 trnG1; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLPA_c13560 trnG4; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLPA_c13630 trnG6; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLPA_c16680 trnG8; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLPA_c36920 trnG9; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLPA_c00730 trnG2; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLPA_c13490 trnG3; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLPA_c13570 trnG5; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLPA_c13660 trnG7; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLPA_c13520 trnH1; tRNA-His K14226 tRNA-His; tRNA His
D CLPA_c13590 trnH2; tRNA-His K14226 tRNA-His; tRNA His
D CLPA_c00580 trnI1; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CLPA_c37130 trnI2; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CLPA_c26010 trnL5; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLPA_c28280 trnL6; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLPA_c00710 trnL1; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLPA_c13550 trnL2; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLPA_c13620 trnL3; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLPA_c24610 trnL4; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLPA_c37320 trnL7; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLPA_c37350 trnL8; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLPA_c00520 trnK1; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLPA_c00880 trnK2; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLPA_c13610 trnK5; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLPA_c13540 trnK4; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLPA_c13510 trnK3; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLPA_c13640 trnK6; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLPA_c37300 trnM3; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLPA_c37330 trnM5; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLPA_c00110 trnM1; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLPA_c37170 trnM2; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLPA_c37310 trnM4; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLPA_c37340 trnM6; tRNA-Met K14230 tRNA-Met; tRNA Met
D CLPA_c00610 trnF1; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLPA_c01100 trnF2; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLPA_c16670 trnF3; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLPA_c13480 trnP1; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLPA_c37630 trnP3; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLPA_c13650 trnP2; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLPA_c00370 trnS3; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLPA_c00250 trnS2; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLPA_c00430 trnS4; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLPA_c00240 trnS1; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLPA_c35500 trnT1; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLPA_c39700 trnT3; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLPA_c39740 trnT4; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLPA_c36910 trnT2; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLPA_c40080 trnT5; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLPA_c35020 trnW2; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CLPA_c34540 trnW1; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CLPA_c35490 trnY1; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLPA_c35520 trnY2; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLPA_c16650 trnV1; tRNA-Val K14237 tRNA-Val; tRNA Val
D CLPA_c35510 trnV2; tRNA-Val K14237 tRNA-Val; tRNA Val
D CLPA_c39760 trnV4; tRNA-Val K14237 tRNA-Val; tRNA Val
D CLPA_c39720 trnV3; tRNA-Val K14237 tRNA-Val; tRNA Val
D CLPA_c00080 rrfA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c01070 rrfG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c01010 rrfF; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c37150 rrfJ; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c00670 rrfD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c00490 rrfB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c00570 rrfC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c14570 rrfH; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c34340 rrfI; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c00850 rrfE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLPA_c00680 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c00590 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c37120 rrlJ; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c00860 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c00090 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c34330 rrlI; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c00500 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c01020 rrlF; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c01080 rrlG; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c14580 rrlH; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLPA_c00100 rrsA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c37110 rrsJ; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c00600 rrsC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c34320 rrsI; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c00510 rrsB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c00870 rrsE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c01090 rrsG; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c01030 rrsF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c00690 rrsD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLPA_c14590 rrsH; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CLPA_c19650 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D CLPA_c19660 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D CLPA_c03330 ndhS2; nicotinate dehydrogenase small FeS subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D CLPA_c10580 fprA2; flavo-diiron protein FprA2 K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4]
D CLPA_c29460 namA; NADPH dehydrogenase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D CLPA_c36280 msrB; peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CLPA_c05170 putative manganese catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D CLPA_c07720 alpha/beta hydrolase superfamily K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D CLPA_c00620 bcp; putative peroxiredoxin Bcp K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CLPA_c38990 tpx; putative thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CLPA_c34400 hndC; NADP-reducing hydrogenase subunit HndC K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3]
D CLPA_c00280 iron hydrogenase 1 K00532 E1.12.7.2; ferredoxin hydrogenase [EC:1.12.7.2]
D CLPA_c07880 pirin-like protein CC K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D CLPA_c12400 dfx; desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2]
D CLPA_c39350 ftnA; ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D CLPA_c28580 ferredoxin-NADP(+) reductase subunit alpha K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CLPA_c23770 nitrogenase-associated protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D CLPA_c01900 nrdG; anaerobic ribonucleoside-triphosphate reductase-activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D CLPA_c00940 act; pyruvate formate-lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLPA_c08090 hpdA; 4-hydroxyphenylacetate decarboxylase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLPA_c08130 pflC; pyruvate formate-lyase 2-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLPA_c37940 radical SAM domain-containing protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLPA_c32960 putative fatty acid methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CLPA_c35770 putative methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D CLPA_c03540 lacA1; galactoside O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D CLPA_c13710 ablB; beta-lysine N6-acetyltransferase K21935 ablB; beta-lysine N6-acetyltransferase [EC:2.3.1.264]
D CLPA_c08670 acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D CLPA_c30150 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D CLPA_c13790 tgl; protein-glutamine gamma-glutamyltransferase K00686 tgl; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D CLPA_c17170 glycosyltransferase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D CLPA_c39520 modD; putative pyrophosphorylase ModD K03813 modD; molybdenum transport protein [EC:2.4.2.-]
D CLPA_c06110 NCAIR mutase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D CLPA_c00390 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CLPA_c22760 Cob(I)yrinic acid a,c-diamide adenosyltransferase K27270 pduO; corrinoid adenosyltransferase [EC:2.5.1.-]
D CLPA_c11360 apbE; thiamine biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D CLPA_c20920 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D CLPA_c39780 putative pyruvate, phosphate dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D CLPA_c40520 DNA polymerase K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]
D CLPA_c21520 ltrA1; group II intron-encoded protein LtrA K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D CLPA_c38800 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D CLPA_c38850 ltrA2; group II intron-encoded protein LtrA K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D CLPA_c32400 diguanylate cyclase K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D CLPA_c37030 disA; DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D CLPA_c36120 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D CLPA_c17250 spoIIAB; anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D CLPA_c26200 hprK; HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D CLPA_c37060 putative ATP:guanido phosphotransferase CKL K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D CLPA_c26520 macro domain-containing protein LIC K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D CLPA_c15710 acyl-CoA thioester hydrolase, YbgC/YbaW family K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CLPA_c37290 spoIIE; stage II sporulation protein E K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D CLPA_c06750 capsular polysaccharide biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D CLPA_c26170 trpH; protein TrpH K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D CLPA_c40720 DHH family protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D CLPA_c23010 putative hydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D CLPA_c01700 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CLPA_c01720 rnmV; ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D CLPA_c04520 nucH; thermonuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D CLPA_c27360 glycosyl hydrolase family 31 K15922 yihQ; sulfoquinovosidase [EC:3.2.1.199]
D CLPA_c39180 putative glycosyl hydrolase K06306 sleL; cortical fragment-lytic enzyme [EC:3.2.1.-]
D CLPA_c07900 putative peptidoglycan-binding domain-containing protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLPA_c03260 N-acyl-D-glutamate deacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D CLPA_c03900 def2; peptide deformylase 2 K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CLPA_c21050 def1; peptide deformylase 1 K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CLPA_c05310 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CLPA_c15400 pgdA2; peptidoglycan-N-acetylglucosamine deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CLPA_c17210 polysaccharide deacetylase family protein K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D CLPA_c03060 RutC family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CLPA_c27190 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CLPA_c33430 moxR; methanol dehydrogenase regulatory protein MoxR K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CLPA_c02700 protein-tyrosine-phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D CLPA_c27930 nnr; bifunctional NAD(P)H-hydrate repair enzyme Nnr K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CLPA_c03040 dpaL; diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D CLPA_c16040 hypothetical protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D CLPA_c32990 TIGR00268 family protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D CLPA_c22830 metB; cystathionine gamma-synthase K26365 cangL; canavanine-gamma-lyase [EC:4.4.1.43]
D CLPA_c06100 hypothetical protein UPF0272 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D CLPA_c16330 fldI1; R-phenyllactate dehydratase activator K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D CLPA_c08020 ATPase HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLPA_c18400 putative calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLPA_c16100 calcium-transporting ATPase 1 K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLPA_c12190 cation transport ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLPA_c23240 calcium-transporting ATPase 1 K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLPA_c24820 cadA1; cadmium, zinc and cobalt-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D CLPA_c07980 ctpC; putative manganese/zinc-exporting P-type ATPase K12950 ctpC; manganese-transporting P-type ATPase C [EC:7.2.2.22]
C 99981 Carbohydrate metabolism
D CLPA_c00750 sfsA; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D CLPA_c22780 ddrA; diol dehydratase-reactivating factor alpha subunit K27264 pduG; propanediol dehydratase-reactivating factor large subunit
D CLPA_c22770 hypothetical protein K27265 pduH; propanediol dehydratase-reactivating factor small subunit
C 99982 Energy metabolism
D CLPA_c01780 ferredoxin K05337 fer; ferredoxin
D CLPA_c21530 iscU2; iron-sulfur cluster assembly scaffold protein IscU 2 K04488 iscU; nitrogen fixation protein NifU and related proteins
D CLPA_c38350 iscU1; iron-sulfur cluster assembly scaffold protein IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D CLPA_c33500 hypothetical protein K02596 nifX; nitrogen fixation protein NifX
D CLPA_c33650 radical SAM protein K02585 nifB; nitrogen fixation protein NifB
D CLPA_c14380 nifE5; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D CLPA_c14290 nifE3; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K22903 vnfE; nitrogenase vanadium-cofactor synthesis protein VnfE
D CLPA_c33750 hypothetical protein K02574 napH; ferredoxin-type protein NapH
D CLPA_c28610 etfB2; electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D CLPA_c28230 DegV domain-containing protein CA K25232 fakB; fatty acid kinase fatty acid binding subunit
D CLPA_c32270 DegV domain-containing protein CA K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CLPA_c15730 glyoxalase/bleomycin resistance protein/dioxygenase K08234 yaeR; glyoxylase I family protein
D CLPA_c18630 hypothetical protein UPF0001 K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CLPA_c03380 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D CLPA_c36150 sleB2; spore cortex-lytic enzyme K01449 cwlJ; cell wall hydrolase
D CLPA_c32810 cell wall hydrolase K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D CLPA_c00330 putative protein kinase K03688 ubiB; ubiquinone biosynthesis protein
D CLPA_c10280 mobB; molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CLPA_c28780 glucitol operon activator K02466 gutM; glucitol operon activator protein
D CLPA_c31570 cold shock protein K03704 cspA; cold shock protein
D CLPA_c01690 cold shock protein K03704 cspA; cold shock protein
D CLPA_c05180 cold shock protein K03704 cspA; cold shock protein
D CLPA_c21600 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D CLPA_c15060 glnBA; nitrogen fixation nifHD region GlnB-like protein 1 K02589 nifHD1; nitrogen regulatory protein PII 1
D CLPA_c15050 nitrogen regulatory protein P-II family K02590 nifHD2; nitrogen regulatory protein PII 2
D CLPA_c35120 RNA-binding protein K06959 tex; protein Tex
D CLPA_c21100 hypothetical protein UPF0296 K09777 remA; extracellular matrix regulatory protein A
D CLPA_c00050 hypothetical protein K24648 remB; extracellular matrix regulatory protein B
C 99974 Translation
D CLPA_c37360 putative RNA binding protein K07571 K07571; S1 RNA binding domain protein
D CLPA_c17470 ribonuclease K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D CLPA_c27130 clpS; ATP-dependent Clp protease adapter protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CLPA_c37070 hypothetical protein K19411 mcsA; protein arginine kinase activator
D CLPA_c26790 tig; trigger factor K03545 tig; trigger factor
D CLPA_c28130 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D CLPA_c07140 hydrogenase assembly chaperone HypC/HupF K04653 hypC; hydrogenase expression/formation protein HypC
D CLPA_c07170 hypD; hydrogenase isoenzymes formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D CLPA_c07150 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D CLPA_c13440 putative hydrogenase expression/formation protein K04655 hypE; hydrogenase expression/formation protein HypE
D CLPA_c07160 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D CLPA_c20560 comM; competence protein ComM K07391 comM; magnesium chelatase family protein
D CLPA_c08640 osmC; stress-induced protein OsmC K07397 yhfA; putative redox protein
D CLPA_c02810 xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family K07402 xdhC; xanthine dehydrogenase accessory factor
D CLPA_c03250 selenium-dependent molybdenum hydroxylase system protein, YqeB family K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D CLPA_c14480 putative double-stranded RNA/RNA-DNA hybrid binding protein K06993 K06993; ribonuclease H-related protein
D CLPA_c23620 hypothetical protein UPF0758 K03630 radC; DNA repair protein RadC
D CLPA_c17870 SMC domain-containing protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D CLPA_c20550 hypothetical protein UPF0102 K07460 yraN; putative endonuclease
D CLPA_c35870 hypothetical protein UPF0213 K07461 K07461; putative endonuclease
D CLPA_c20540 smf; protein Smf K04096 smf; DNA processing protein
D CLPA_c21590 rarA; recombination factor protein RarA K07478 ycaJ; putative ATPase
D CLPA_c27290 hypothetical protein K07482 K07482; transposase, IS30 family
D CLPA_c22570 transposase IS30 family K07482 K07482; transposase, IS30 family
D CLPA_c19930 transposase K07483 K07483; transposase
D CLPA_c07610 transposase K07483 K07483; transposase
D CLPA_c32490 transposase IS3/IS911 family protein K07483 K07483; transposase
D CLPA_c04160 hypothetical protein K07483 K07483; transposase
D CLPA_c13940 hypothetical protein K07483 K07483; transposase
D CLPA_c23960 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D CLPA_c07740 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D CLPA_c08190 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D CLPA_c36250 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D CLPA_c09550 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D CLPA_c01380 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D CLPA_c01390 transposase IS116/IS110/IS902 family K07486 K07486; transposase
D CLPA_c12050 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D CLPA_c33560 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D CLPA_c38190 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D CLPA_c38670 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D CLPA_c21870 tnpA6; transposase for insertion sequence element IS200 K07491 rayT; REP-associated tyrosine transposase
D CLPA_c20890 tnpA5; transposase for insertion sequence element IS200 K07491 rayT; REP-associated tyrosine transposase
D CLPA_c36180 tnpA4; transposase for insertion sequence element IS200 K07491 rayT; REP-associated tyrosine transposase
D CLPA_c17890 transposase K07491 rayT; REP-associated tyrosine transposase
D CLPA_c10110 insQ1; putative transposase InsQ for insertion sequence element IS609 K07496 K07496; putative transposase
D CLPA_c39480 transposase, IS605 OrfB family protein K07496 K07496; putative transposase
D CLPA_c16600 insQ2; putative transposase InsQ for insertion sequence element IS609 K07496 K07496; putative transposase
D CLPA_c13100 transposase, IS605 OrfB family protein K07496 K07496; putative transposase
D CLPA_c25860 insertion element IS407 uncharacterized 31.7 kDa protein K07497 K07497; putative transposase
D CLPA_c19940 insertion element IS407 K07497 K07497; putative transposase
D CLPA_c19950 transposase IS3/IS911 K07497 K07497; putative transposase
D CLPA_c25850 transposase IS3/IS911 K07497 K07497; putative transposase
D CLPA_c04710 transposase IS3/IS911 K07497 K07497; putative transposase
D CLPA_c04720 insertion element IS407 uncharacterized 31.7 kDa protein K07497 K07497; putative transposase
D CLPA_c15890 transposase of IS1604-like element K07497 K07497; putative transposase
D CLPA_c07620 integrase core domain protein K07497 K07497; putative transposase
D CLPA_c24470 transposase of IS1604-like element K07497 K07497; putative transposase
D CLPA_c09070 transposase of IS1604-like element K07497 K07497; putative transposase
D CLPA_c25740 transposase of IS1604-like element K07497 K07497; putative transposase
D CLPA_c32480 nisX2; transposase for insertion sequence element IS904 K07497 K07497; putative transposase
D CLPA_c11170 integrase core domain-containing protein K07497 K07497; putative transposase
D CLPA_c19750 transposase of IS1604-like element K07497 K07497; putative transposase
D CLPA_c11550 transposase of IS1604-like element K07497 K07497; putative transposase
D CLPA_c19960 nisX1; transposase for insertion sequence element IS904 K07497 K07497; putative transposase
D CLPA_c04170 hypothetical protein K07497 K07497; putative transposase
D CLPA_c13920 transposase of IS1604-like element K07497 K07497; putative transposase
D CLPA_c13930 hypothetical protein K07497 K07497; putative transposase
D CLPA_c29780 transposase of IS1604-like element K07497 K07497; putative transposase
D CLPA_c38830 transposase of IS1604-like element K07497 K07497; putative transposase
D CLPA_c05750 transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D CLPA_c01370 phage shock protein A K03969 pspA; phage shock protein A
D CLPA_c00450 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CLPA_c36370 pit; putative low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D CLPA_c10970 transporter, SSS family K03307 TC.SSS; solute:Na+ symporter, SSS family
D CLPA_c11070 pucI; putative allantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
C 99978 Cell growth
D CLPA_c34360 cooC; carbon monoxide dehydrogenase accessory protein CooC K07321 cooC; CO dehydrogenase maturation factor
D CLPA_c00480 bofA; sigma-K factor processing regulatory protein BofA K06317 bofA; inhibitor of the pro-sigma K processing machinery
D CLPA_c00410 spore coat protein K06329 cotF; spore coat protein F
D CLPA_c38120 cotJB; spore coat peptide assembly protein CotJB K06333 cotJB; spore coat protein JB
D CLPA_c38130 cotJC; protein CotJC K06334 cotJC; spore coat protein JC
D CLPA_c40950 jag; protein Jag K06346 jag; spoIIIJ-associated protein
D CLPA_c39150 kipA; KipI antagonist K06350 kipA; antagonist of KipI
D CLPA_c39160 kipI; kinase A inhibitor K06351 kipI; inhibitor of KinA
D CLPA_c01610 spmA; spore maturation protein A K06373 spmA; spore maturation protein A
D CLPA_c01620 spmB; spore maturation protein B K06374 spmB; spore maturation protein B
D CLPA_c17240 spoIIAA; anti-sigma F factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D CLPA_c19240 spoIIM; stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M
D CLPA_c23180 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D CLPA_c10120 stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D CLPA_c02510 spoIIR; stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D CLPA_c18970 spoIIIAA; stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA
D CLPA_c18980 spoIIIAB; stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB
D CLPA_c18990 spoIIIAC; stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D CLPA_c19000 spoIIIAD; stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD
D CLPA_c19010 spoIIIAE; stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE
D CLPA_c19020 spoIIIAF; stage III sporulation protein AF K06395 spoIIIAF; stage III sporulation protein AF
D CLPA_c19030 spoIIIAG; stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG
D CLPA_c19040 spoIIIAH; stage III sporulation protein AH K06397 spoIIIAH; stage III sporulation protein AH
D CLPA_c21130 spoIVA; stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D CLPA_c24080 site-specific DNA recombinase K06400 spoIVCA; site-specific DNA recombinase
D CLPA_c12080 spoVAC; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D CLPA_c12090 spoVAD; stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D CLPA_c17270 spoVAEA; stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D CLPA_c12100 spoVAEB; stage V sporulation protein AEB K06407 spoVAE; stage V sporulation protein AE
D CLPA_c37530 spoVG; putative septation protein SpoVG K06412 spoVG; stage V sporulation protein G
D CLPA_c33180 spoVR; stage V sporulation protein R K06415 spoVR; stage V sporulation protein R
D CLPA_c20230 spoVS; stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D CLPA_c10600 small acid-soluble spore protein-like protein K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D CLPA_c26950 small, acid-soluble spore protein alpha K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D CLPA_c33910 small acid-soluble spore protein alpha/beta type K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D CLPA_c33920 hypothetical protein K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D CLPA_c04560 small acid-soluble spore protein K06425 sspH; small acid-soluble spore protein H (minor)
D CLPA_c02450 sporulation peptidase family protein K06436 yabG; spore coat assemly protein
D CLPA_c23020 stage IV sporulation protein K06438 yqfD; similar to stage IV sporulation protein
D CLPA_c12850 gerKA2; spore germination protein KA K06295 gerKA; spore germination protein KA
D CLPA_c00320 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC
D CLPA_c10860 gerKC; spore germination protein KC K06297 gerKC; spore germination protein KC
D CLPA_c39240 spore germination protein K06298 gerM; germination protein M
D CLPA_c00310 gerKA1; spore germination protein KA K06307 yfkQ; spore germination protein
D CLPA_c10850 gerKA; spore germination protein KA K06307 yfkQ; spore germination protein
D CLPA_c02530 ypeB; sporulation protein YpeB K06313 ypeB; spore germination protein
C 99993 Cell motility
D CLPA_c08400 TfoX domain-containing protein K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D CLPA_c28680 cstA; carbon starvation protein A K06200 cstA; carbon starvation protein
D CLPA_c21430 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D CLPA_c33330 ACT domain-containing protein-containing protein K07166 K07166; ACT domain-containing protein
D CLPA_c26690 phoH; putative phosphate starvation-inducible protein PhoH K07175 phoH2; PhoH-like ATPase
D CLPA_c33200 prkA; protein PrkA K07180 prkA; serine protein kinase
C 99992 Structural proteins
D CLPA_c13750 lyc2; autolytic lysozyme K07273 acm; lysozyme
D CLPA_c05760 lyc1; autolytic lysozyme K07273 acm; lysozyme
D CLPA_c23480 lyc3; autolytic lysozyme K07273 acm; lysozyme
D CLPA_c37760 RND family efflux transporter, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D CLPA_c15290 RND family efflux transporter MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D CLPA_c02270 RND family efflux transporter, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D CLPA_c19800 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
D CLPA_c10190 hypothetical protein K21463 tcaA; membrane-associated protein TcaA
C 99994 Others
D CLPA_c21200 phoU; phosphate-specific transport system accessory protein PhoU K02039 phoU; phosphate transport system protein
D CLPA_c02750 bacteriohemerythrin K07216 hr; hemerythrin
D CLPA_c14240 hypothetical protein K07219 K07219; putative molybdopterin biosynthesis protein
D CLPA_c14330 excisionase family protein K07219 K07219; putative molybdopterin biosynthesis protein
D CLPA_c11260 DNA binding domain-containing protein, excisionase family K07219 K07219; putative molybdopterin biosynthesis protein
D CLPA_c11270 DNA binding domain-containing protein, excisionase family K07219 K07219; putative molybdopterin biosynthesis protein
D CLPA_c34030 putative molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CLPA_c36130 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein
D CLPA_c20050 putative phosphatase NT01CX K04477 ycdX; putative hydrolase
D CLPA_c15260 putative esterase, alpha-beta hydrolase superfamily K07001 K07001; NTE family protein
D CLPA_c09760 HAD-superfamily hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D CLPA_c11600 HAD-superfamily hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D CLPA_c38380 sufB; FeS cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D CLPA_c38370 sufD; FeS cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D CLPA_c27760 hypothetical protein K07038 K07038; inner membrane protein
D CLPA_c34410 putative membrane-bound metal-dependent hydrolase DUF457 K07038 K07038; inner membrane protein
D CLPA_c10360 hypothetical protein K07058 K07058; membrane protein
D CLPA_c28330 lemA; protein LemA K03744 lemA; LemA protein
D CLPA_c36030 dedA; protein DedA K03975 dedA; membrane-associated protein
D CLPA_c08050 hypothetical protein K01421 yhgE; putative membrane protein
D CLPA_c31380 hypothetical protein K00389 yidH; putative membrane protein
D CLPA_c30020 hypothetical protein K08972 K08972; putative membrane protein
D CLPA_c25610 hypothetical protein K08982 K08982; putative membrane protein
D CLPA_c05440 TIGR03943 family protein K08986 ycgQ; putative membrane protein
C 99997 Function unknown
D CLPA_c23460 ankyrin K06867 K06867; uncharacterized protein
D CLPA_c22250 SCIFF radical SAM maturase K06871 K06871; uncharacterized protein
D CLPA_c19900 Fe-S oxidoreductase K06871 K06871; uncharacterized protein
D CLPA_c04760 radical SAM domain-containing protein K06871 K06871; uncharacterized protein
D CLPA_c28320 hypothetical protein K06872 K06872; uncharacterized protein
D CLPA_c32520 thioredoxin domain-containing protein K06888 K06888; uncharacterized protein
D CLPA_c29660 prolyl oligopeptidase family protein K06889 K06889; uncharacterized protein
D CLPA_c29400 putative ATPase (AAA+ superfamily) K06923 K06923; uncharacterized protein
D CLPA_c06070 transporter K06926 K06926; uncharacterized protein
D CLPA_c39790 CoA-binding protein K06929 K06929; uncharacterized protein
D CLPA_c15140 hypothetical protein K06934 K06934; uncharacterized protein
D CLPA_c11570 HD domain-containing protein K06950 K06950; uncharacterized protein
D CLPA_c02220 HD superfamily hydrolase K06950 K06950; uncharacterized protein
D CLPA_c20690 hypothetical protein UPF0109 K06960 K06960; uncharacterized protein
D CLPA_c36940 putative RNA-binding protein K06962 K06962; uncharacterized protein
D CLPA_c21030 putative neutral zinc metallopeptidase K06973 K06973; uncharacterized protein
D CLPA_c18450 putative deacylase K06987 K06987; uncharacterized protein
D CLPA_c18460 putative deacylase K06987 K06987; uncharacterized protein
D CLPA_c38140 putative flavin-nucleotide-binding protein K07005 K07005; uncharacterized protein
D CLPA_c33570 pyridoxamine 5'-phosphate oxidase K07005 K07005; uncharacterized protein
D CLPA_c36000 metal-dependent RNase K07041 K07041; uncharacterized protein
D CLPA_c03670 nitroreductase K07078 K07078; uncharacterized protein
D CLPA_c06090 aldo/keto reductase family oxidoreductase K07079 K07079; uncharacterized protein
D CLPA_c05430 permease K07089 K07089; uncharacterized protein
D CLPA_c02160 sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D CLPA_c22650 putative permease K07090 K07090; uncharacterized protein
D CLPA_c25110 phosphoesterase, MJ0936 family K07095 K07095; uncharacterized protein
D CLPA_c13470 phosphodiesterase K07095 K07095; uncharacterized protein
D CLPA_c31400 metallophosphoesterase K07096 K07096; uncharacterized protein
D CLPA_c10340 metallophosphoesterase K07098 K07098; uncharacterized protein
D CLPA_c15590 putative phosphohydrolase K07098 K07098; uncharacterized protein
D CLPA_c12810 Ser/Thr protein phosphatase family protein K07099 K07099; uncharacterized protein
D CLPA_c00140 niaR; putative transcription repressor NiaR K07105 K07105; uncharacterized protein
D CLPA_c11250 hypothetical protein K07120 K07120; uncharacterized protein
D CLPA_c12340 fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K07124 K07124; uncharacterized protein
D CLPA_c11820 hypothetical protein K07126 K07126; uncharacterized protein
D CLPA_c22610 radical SAM domain-containing protein K07129 K07129; uncharacterized protein
D CLPA_c34000 hypothetical protein K07129 K07129; uncharacterized protein
D CLPA_c09850 ATPase K07133 K07133; uncharacterized protein
D CLPA_c36100 oxidoreductase, FAD-binding protein K07137 K07137; uncharacterized protein
D CLPA_c39840 NAD(FAD)-utilizing dehydrogenase K07137 K07137; uncharacterized protein
D CLPA_c16050 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K07138 K07138; uncharacterized protein
D CLPA_c37910 radical SAM family protein K07139 K07139; uncharacterized protein
D CLPA_c10830 hypothetical protein K07150 K07150; uncharacterized protein
D CLPA_c22850 hypothetical protein K07164 K07164; uncharacterized protein
D CLPA_c40970 putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D CLPA_c07200 hypothetical protein K09004 K09004; uncharacterized protein
D CLPA_c07290 hypothetical protein K09004 K09004; uncharacterized protein
D CLPA_c23040 GatB/yqey domain-containing protein K09117 K09117; uncharacterized protein
D CLPA_c00150 hypothetical protein UPF0182 K09118 K09118; uncharacterized protein
D CLPA_c31110 hypothetical protein K09126 K09126; uncharacterized protein
D CLPA_c33320 hypothetical protein K09157 K09157; uncharacterized protein
D CLPA_c30400 HD domain-containing protein K09163 K09163; uncharacterized protein
D CLPA_c30130 hypothetical protein K09384 K09384; uncharacterized protein
D CLPA_c29270 hypothetical protein K09706 K09706; uncharacterized protein
D CLPA_c14010 hypothetical protein K09729 K09729; uncharacterized protein
D CLPA_c02900 ApbE family protein K09740 K09740; uncharacterized protein
D CLPA_c17560 hypothetical protein K09749 K09749; uncharacterized protein
D CLPA_c29020 hypothetical protein K09764 K09764; uncharacterized protein
D CLPA_c12820 hypothetical protein K09766 K09766; uncharacterized protein
D CLPA_c13300 hypothetical protein UPF0178 K09768 K09768; uncharacterized protein
D CLPA_c16110 hypothetical protein K09770 K09770; uncharacterized protein
D CLPA_c31750 hypothetical protein K09776 K09776; uncharacterized protein
D CLPA_c01870 hypothetical protein K09776 K09776; uncharacterized protein
D CLPA_c14720 hypothetical protein K09779 K09779; uncharacterized protein
D CLPA_c33190 sporulation protein K09786 K09786; uncharacterized protein
D CLPA_c20720 hypothetical protein K09787 K09787; uncharacterized protein
D CLPA_c09520 hypothetical protein K09790 K09790; uncharacterized protein
D CLPA_c33800 hypothetical protein K09792 K09792; uncharacterized protein
D CLPA_c39460 hypothetical protein K09807 K09807; uncharacterized protein
D CLPA_c21660 hypothetical protein K00243 K00243; uncharacterized protein
D CLPA_c23800 hypothetical protein K09861 K09861; uncharacterized protein
D CLPA_c30460 hutD; protein HutD K09975 K09975; uncharacterized protein
D CLPA_c26570 acetyltransferase, including N-acetylases of ribosomal proteins K01163 K01163; uncharacterized protein
D CLPA_c14740 RNase_H superfamily K07502 yprB; uncharacterized protein
D CLPA_c23360 putative ribosomal protein K07584 ysxB; uncharacterized protein
D CLPA_c36380 phosphate transport regulator K07220 K07220; uncharacterized protein
D CLPA_c20390 putative nucleic-acid-binding protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 16, 2024