+D GENES KO #

  KEGG Orthology (KO) - Chlamydia pecorum PV3056/3

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:cpeo00010] D CPE1_0704 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CPE1_0583 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CPE1_0585 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D CPE1_0484 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CPE1_0308 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CPE1_0119 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CPE1_0067 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CPE1_0862 pgmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CPE1_0922 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CPE1_0640 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CPE1_0463 pdhA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CPE1_0462 pdhB; pyruvate dehydrogenase E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CPE1_0461 pdhC; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CPE1_0892 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPE1_0874 pckA; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:cpeo00020] D CPE1_0404 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CPE1_0405 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CPE1_0223 branched-chain alpha-keto acid dehydrogenase subunit K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CPE1_0892 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPE1_0755 sucD; succinyl-Coa synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CPE1_0756 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CPE1_0928 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CPE1_0927 sdhB; succinate dehydrogenase subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CPE1_0929 sdhC; succinate dehydrogenase subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CPE1_0717 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CPE1_0703 mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CPE1_0874 pckA; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CPE1_0463 pdhA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CPE1_0462 pdhB; pyruvate dehydrogenase E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CPE1_0461 pdhC; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:cpeo00030] D CPE1_0704 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CPE1_0526 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CPE1_0525 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D CPE1_0416 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CPE1_0563 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CPE1_0830 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CPE1_0654 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CPE1_0605 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D CPE1_0670 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CPE1_0484 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CPE1_0583 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CPE1_0585 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] C 00040 Pentose and glucuronate interconversions D CPE1_0563 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:cpeo00051] D CPE1_0335 phosphoglucomutase/phosphomannomutase family protein K01840 manB; phosphomannomutase [EC:5.4.2.8] D CPE1_0583 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CPE1_0585 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D CPE1_0484 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CPE1_0308 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism D CPE1_0583 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:cpeo00500] D CPE1_0138 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CPE1_0781 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D CPE1_0271 glgB; 1,4-alpha-glucan branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CPE1_0460 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D CPE1_0441 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D CPE1_0395 glycosyl hydrolase family protein K01214 ISA; isoamylase [EC:3.2.1.68] D CPE1_0704 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cpeo00520] D CPE1_0760 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CPE1_0761 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CPE1_0964 glmU; putative glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CPE1_0869 UTP--glucose-1-phosphate uridylyltransferase K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83] D CPE1_0176 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CPE1_0744 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CPE1_0704 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CPE1_0335 phosphoglucomutase/phosphomannomutase family protein K01840 manB; phosphomannomutase [EC:5.4.2.8] D CPE1_0138 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:cpeo00620] D CPE1_0463 pdhA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CPE1_0462 pdhB; pyruvate dehydrogenase E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CPE1_0461 pdhC; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CPE1_0892 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPE1_0640 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CPE1_0370 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CPE1_0561 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CPE1_0560 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CPE1_0337 accD; acetyl-CoA carboxylase carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CPE1_0703 mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CPE1_0717 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CPE1_0874 pckA; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cpeo00630] D CPE1_0703 mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CPE1_0229 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CPE1_0892 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPE1_0350 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00640 Propanoate metabolism [PATH:cpeo00640] D CPE1_0322 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D CPE1_0892 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPE1_0370 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CPE1_0561 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CPE1_0560 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CPE1_0337 accD; acetyl-CoA carboxylase carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CPE1_0756 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CPE1_0755 sucD; succinyl-Coa synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism D CPE1_0928 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CPE1_0927 sdhB; succinate dehydrogenase subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CPE1_0929 sdhC; succinate dehydrogenase subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit C 00660 C5-Branched dibasic acid metabolism D CPE1_0756 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CPE1_0755 sucD; succinyl-Coa synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism D CPE1_0308 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:cpeo00190] D CPE1_0928 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CPE1_0927 sdhB; succinate dehydrogenase subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CPE1_0929 sdhC; succinate dehydrogenase subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CPE1_0635 cydA; cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CPE1_0634 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CPE1_0649 atpA; V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D CPE1_0648 atpB; V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D CPE1_0647 atpD; V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D CPE1_0651 atpE; V-type ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D CPE1_0646 atpI; V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D CPE1_0645 atpK; V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D CPE1_0805 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:cpeo00680] D CPE1_0229 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CPE1_0922 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CPE1_0703 mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CPE1_0484 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CPE1_0583 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CPE1_0862 pgmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism C 00920 Sulfur metabolism [PATH:cpeo00920] D CPE1_0803 Inositol monophosphatase family protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CPE1_0200 cysJ; putative oxidoreductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:cpeo00061] D CPE1_0370 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CPE1_0561 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CPE1_0560 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CPE1_0337 accD; acetyl-CoA carboxylase carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CPE1_0472 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D CPE1_0470 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CPE1_0469 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CPE1_0807 fabF; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CPE1_0471 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CPE1_0686 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CPE1_0092 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CPE1_0378 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:cpeo00561] D CPE1_0770 glycerol-3-phosphate acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CPE1_0767 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CPE1_0178 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CPE1_0802 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:cpeo00564] D CPE1_0870 gpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D CPE1_0770 glycerol-3-phosphate acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CPE1_0178 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CPE1_0802 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CPE1_0180 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D CPE1_0750 CDP-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CPE1_0886 psdD; phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D CPE1_0130 glycerol-3-P phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CPE1_0782 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CPE1_0550 phospholipase D family protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:cpeo00230] D CPE1_0670 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CPE1_0506 surE; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CPE1_0406 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CPE1_0546 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CPE1_0125 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CPE1_0943 putative deoxyribonucleotide triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CPE1_0547 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CPE1_0618 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CPE1_0749 nrdA; ribonucleotide-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CPE1_0748 nrdB; ribonucleotide-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CPE1_0829 putative AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D CPE1_0521 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CPE1_0719 adk_1; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:cpeo00240] D CPE1_0137 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CPE1_0049 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CPE1_0125 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CPE1_0313 maf; Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D CPE1_0528 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D CPE1_0179 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CPE1_0506 surE; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CPE1_0392 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D CPE1_0749 nrdA; ribonucleotide-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CPE1_0748 nrdB; ribonucleotide-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CPE1_0494 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D CPE1_0338 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:cpeo00250] D CPE1_0006 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CPE1_0760 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] C 00260 Glycine, serine and threonine metabolism [PATH:cpeo00260] D CPE1_0683 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CPE1_0684 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CPE1_0229 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CPE1_0862 pgmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CPE1_0892 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPE1_0350 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D CPE1_0750 CDP-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CPE1_0672 trpA; tryptophan synthase,alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CPE1_0673 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:cpeo00270] D CPE1_0406 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CPE1_0683 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CPE1_0684 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CPE1_0006 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CPE1_0703 mdhC; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00280 Valine, leucine and isoleucine degradation [PATH:cpeo00280] D CPE1_0804 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D CPE1_0322 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D CPE1_0892 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cpeo00290] D CPE1_0804 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] C 00300 Lysine biosynthesis [PATH:cpeo00300] D CPE1_0683 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CPE1_0684 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CPE1_0682 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CPE1_0685 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CPE1_0231 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CPE1_0254 putative aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D CPE1_0365 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CPE1_0823 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:cpeo00310] D CPE1_0405 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CPE1_0223 branched-chain alpha-keto acid dehydrogenase subunit K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CPE1_0892 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis D CPE1_0006 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00330 Arginine and proline metabolism [PATH:cpeo00330] D CPE1_0699 hypothetical protein K02626 pdaD; arginine decarboxylase [EC:4.1.1.19] D CPE1_0006 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism D CPE1_0006 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00360 Phenylalanine metabolism D CPE1_0006 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism [PATH:cpeo00380] D CPE1_0671 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D CPE1_0405 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CPE1_0223 branched-chain alpha-keto acid dehydrogenase subunit K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CPE1_0892 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cpeo00400] D CPE1_0263 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CPE1_0695 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D CPE1_0696 aroDE; 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] D CPE1_0693 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D CPE1_0692 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D CPE1_0694 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CPE1_0676 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D CPE1_0675 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D CPE1_0672 trpA; tryptophan synthase,alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CPE1_0673 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CPE1_0006 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism D CPE1_0267 phnP; metal dependent hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:cpeo00450] D CPE1_0059 aminotransferase, class V K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D CPE1_0453 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CPE1_0616 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D CPE1_0229 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:cpeo00470] D CPE1_0817 murC; bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CPE1_0821 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CPE1_0231 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] C 00480 Glutathione metabolism [PATH:cpeo00480] D CPE1_0398 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CPE1_0416 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CPE1_0526 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:cpeo00540] D CPE1_0093 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CPE1_0091 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D CPE1_0465 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CPE1_0763 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CPE1_0221 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CPE1_0224 hypothetical protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D CPE1_0022 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CPE1_0529 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D CPE1_0588 gseA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CPE1_0639 putative lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cpeo00541] D CPE1_0335 phosphoglucomutase/phosphomannomutase family protein K01840 manB; phosphomannomutase [EC:5.4.2.8] D CPE1_0964 glmU; putative glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:cpeo00550] D CPE1_0176 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CPE1_0744 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CPE1_0817 murC; bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CPE1_0821 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CPE1_0365 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CPE1_0823 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CPE1_0181 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CPE1_0822 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CPE1_0818 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CPE1_0364 putative penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CPE1_0072 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:cpeo00730] D CPE1_0388 aminotransferase class-V family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CPE1_0863 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CPE1_0304 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CPE1_0521 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CPE1_0719 adk_1; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:cpeo00740] D CPE1_0853 ribA_ribB; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CPE1_0854 ribD; riboflavin biosynthesis protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CPE1_0852 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CPE1_0218 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CPE1_0447 ribF; riboflavin biosynthesis protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D CPE1_0502 phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism C 00760 Nicotinate and nicotinamide metabolism [PATH:cpeo00760] D CPE1_0506 surE; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] C 00770 Pantothenate and CoA biosynthesis [PATH:cpeo00770] D CPE1_0134 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CPE1_0454 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] C 00780 Biotin metabolism [PATH:cpeo00780] D CPE1_0807 fabF; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CPE1_0471 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CPE1_0686 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CPE1_0092 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CPE1_0378 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CPE1_0688 bioF; putative 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CPE1_0800 bioF1; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CPE1_0690 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CPE1_0689 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D CPE1_0687 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D CPE1_0859 birA; biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:cpeo00785] D CPE1_0893 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D CPE1_0126 lipoate protein ligase-like protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CPE1_0347 lplA; lipoate protein ligase-like protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CPE1_0892 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPE1_0463 pdhA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CPE1_0462 pdhB; pyruvate dehydrogenase E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CPE1_0461 pdhC; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CPE1_0404 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CPE1_0405 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CPE1_0223 branched-chain alpha-keto acid dehydrogenase subunit K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CPE1_0322 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D CPE1_0350 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:cpeo00790] D CPE1_0853 ribA_ribB; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CPE1_0674 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K22100 trpF; 2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one isomerase/dehydratase [EC:4.2.1.160] C 00670 One carbon pool by folate [PATH:cpeo00670] D CPE1_0433 folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CPE1_0229 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CPE1_0094 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CPE1_0955 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:cpeo00860] D CPE1_0188 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CPE1_0030 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D CPE1_0602 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CPE1_0001 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CPE1_0331 hemC; Porphobilinogen deaminase, dipyromethane cofactor binding domain protein K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D CPE1_0228 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D CPE1_0833 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D CPE1_0834 hemN_1; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D CPE1_0835 hemG; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D CPE1_0142 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cpeo00130] D CPE1_0501 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D CPE1_0502 phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CPE1_0234 ubiE; ubiquinone-menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D CPE1_0236 hypothetical protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D CPE1_0811 hypothetical protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:cpeo00900] D CPE1_0304 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CPE1_0426 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D CPE1_0168 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D CPE1_0774 ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D CPE1_0201 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D CPE1_0407 gcpE; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D CPE1_0713 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D CPE1_0502 phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CPE1_0965 ispA; geranylgeranyl transferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CPE1_0181 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CPE1_0830 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:cpeo00261] D CPE1_0683 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CPE1_0684 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CPE1_0682 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CPE1_0685 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis D CPE1_0006 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D CPE1_0470 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CPE1_0471 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CPE1_0686 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CPE1_0378 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D CPE1_0472 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D CPE1_0696 aroDE; 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation D CPE1_0439 3-octaprenyl-4-hydroxybenzoate carboxy-lyase family protein K16239 bsdC; 4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.61] D CPE1_0502 phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:cpeo03020] D CPE1_0656 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CPE1_0655 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CPE1_0117 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:cpeo03010] D CPE1_0452 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CPE1_0051 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CPE1_0102 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CPE1_0012 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CPE1_0112 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CPE1_0777 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CPE1_0197 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CPE1_0109 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CPE1_0519 rspI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CPE1_0199 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CPE1_0116 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CPE1_0196 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CPE1_0115 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CPE1_0791 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CPE1_0731 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CPE1_0622 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CPE1_0105 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CPE1_0776 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CPE1_0100 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CPE1_0959 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CPE1_0320 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CPE1_0659 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CPE1_0099 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CPE1_0096 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CPE1_0097 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CPE1_0108 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CPE1_0110 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CPE1_0657 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CPE1_0775 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CPE1_0658 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CPE1_0660 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CPE1_0518 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CPE1_0106 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CPE1_0113 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CPE1_0103 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CPE1_0118 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CPE1_0111 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CPE1_0620 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CPE1_0740 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CPE1_0203 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CPE1_0101 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CPE1_0098 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CPE1_0107 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CPE1_0779 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CPE1_0204 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CPE1_0440 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CPE1_0104 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CPE1_0626 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CPE1_0515 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CPE1_0741 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CPE1_0792 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CPE1_0843 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CPE1_0842 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CPE1_0841 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:cpeo00970] D CPE1_0005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CPE1_0532 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CPE1_0940 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPE1_0023 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPE1_0159 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPE1_0367 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPE1_0611 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CPE1_0504 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CPE1_0824 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CPE1_0780 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CPE1_0047 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CPE1_0052 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CPE1_0877 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CPE1_0844 tRNA-His K14226 tRNA-His; tRNA His D CPE1_0533 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CPE1_0154 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPE1_0085 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPE1_0121 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPE1_0164 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPE1_0707 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPE1_0046 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CPE1_0669 tRNA-Met K14230 tRNA-Met; tRNA Met D CPE1_0586 tRNA-Met K14230 tRNA-Met; tRNA Met D CPE1_0587 tRNA-Met K14230 tRNA-Met; tRNA Met D CPE1_0202 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CPE1_0412 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CPE1_0966 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CPE1_0738 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CPE1_0129 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CPE1_0209 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CPE1_0300 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CPE1_0509 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CPE1_0043 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CPE1_0665 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CPE1_0663 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CPE1_0510 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CPE1_0505 tRNA-Val K14237 tRNA-Val; tRNA Val D CPE1_0746 tRNA-Val K14237 tRNA-Val; tRNA Val D CPE1_0188 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CPE1_0290 gatA; glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CPE1_0291 gatB; glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CPE1_0289 gatC; glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CPE1_0831 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CPE1_0081 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CPE1_0783 glycyl-tRNA synthetase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14] D CPE1_0916 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CPE1_0855 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CPE1_0795 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CPE1_0616 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CPE1_0094 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CPE1_0643 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CPE1_0589 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CPE1_0629 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CPE1_0796 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CPE1_0177 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CPE1_0249 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CPE1_0080 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CPE1_0739 pheS; phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CPE1_0150 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CPE1_0415 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CPE1_0920 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:cpeo03060] D CPE1_0114 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CPE1_0662 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D CPE1_0309 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D CPE1_0183 secD_secF; bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein D CPE1_0839 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D CPE1_0457 putative inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CPE1_0884 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CPE1_0623 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CPE1_0757 ftsY; signal recognition particle-docking protein K03110 ftsY; fused signal recognition particle receptor D CPE1_0628 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CPE1_0215 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:cpeo04122] D CPE1_0388 aminotransferase class-V family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CPE1_0863 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CPE1_0345 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:cpeo03018] D CPE1_0922 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CPE1_0732 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CPE1_0245 ribonuclease family protein K12573 rnr; ribonuclease R [EC:3.1.13.1] D CPE1_0135 rho; transcription termination factor K03628 rho; transcription termination factor Rho D CPE1_0583 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CPE1_0246 dnaK; molecular chaperone K04043 dnaK; molecular chaperone DnaK D CPE1_0609 groEL; chaperonin, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CPE1_0941 groEL_1; chaperonin, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CPE1_0762 poly A polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CPE1_0881 pcnB; poly A polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:cpeo03030] D CPE1_0374 dnaQ_1; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CPE1_0088 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CPE1_0078 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CPE1_0329 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPE1_0495 dnaX_1; DNA polymerase III subunit delta' K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPE1_0400 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CPE1_0430 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CPE1_0128 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CPE1_0786 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CPE1_0397 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CPE1_0619 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CPE1_0295 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D CPE1_0593 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:cpeo03410] D CPE1_0888 putative endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CPE1_0945 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CPE1_0383 putative adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CPE1_0244 methylpurine-DNA glycosylase family protein K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D CPE1_0013 putative endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CPE1_0184 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CPE1_0593 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:cpeo03420] D CPE1_0832 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CPE1_0641 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D CPE1_0921 uvrB; excinuclease ABC, subunit B K03702 uvrB; excinuclease ABC subunit B D CPE1_0788 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D CPE1_0946 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CPE1_0593 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:cpeo03430] D CPE1_0787 mutS; DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS D CPE1_0910 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D CPE1_0946 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CPE1_0307 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CPE1_0306 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CPE1_0184 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CPE1_0397 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CPE1_0078 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CPE1_0430 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CPE1_0329 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPE1_0495 dnaX_1; DNA polymerase III subunit delta' K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPE1_0400 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CPE1_0374 dnaQ_1; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CPE1_0088 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CPE1_0593 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:cpeo03440] D CPE1_0184 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CPE1_0397 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CPE1_0429 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF D CPE1_0156 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CPE1_0468 recR; recombination protein RecR K06187 recR; recombination protein RecR D CPE1_0956 recA; recombinase A K03553 recA; recombination protein RecA D CPE1_0124 ruvA; Holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA D CPE1_0393 ruvB; Holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CPE1_0123 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CPE1_0008 recB; exodeoxyribonuclease V, subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D CPE1_0009 recC; exodeoxyribonuclease V, subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D CPE1_0615 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CPE1_0961 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CPE1_0078 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CPE1_0430 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CPE1_0329 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPE1_0495 dnaX_1; DNA polymerase III subunit delta' K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPE1_0400 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CPE1_0374 dnaQ_1; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CPE1_0088 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CPE1_0799 priA; primosome protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus D CPE1_0771 ide; insulinase family-protein K01408 IDE; insulysin [EC:3.4.24.56] C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:cpeo02010] D CPE1_0599 putative ABC transporter, periplasmic substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CPE1_0601 ABC transporter, permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CPE1_0600 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D CPE1_0265 amino acid ABC transporter, periplasmic amino acid-binding protein K09996 artJ; arginine transport system substrate-binding protein D CPE1_0570 glnP; amino acid ABC transporter, permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein D CPE1_0569 amino acid ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D CPE1_0488 lipoprotein, NPLA family K02073 metQ; D-methionine transport system substrate-binding protein D CPE1_0487 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein D CPE1_0486 ABC transporter, ATP-binding component K02071 metN; D-methionine transport system ATP-binding protein D CPE1_0573 oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CPE1_0574 oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CPE1_0578 peptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein D CPE1_0580 peptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D CPE1_0579 peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CPE1_0208 solute binding protein K09815 znuA; zinc transport system substrate-binding protein D CPE1_0206 putative transport protein K09816 znuB; zinc transport system permease protein D CPE1_0207 ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CPE1_0422 ABC transporter, periplasmic substrate-binding protein, putative K11707 troA; manganese/zinc/iron transport system substrate-binding protein D CPE1_0424 ABC transporter, permease protein, putative K11708 troC; manganese/zinc/iron transport system permease protein D CPE1_0425 ABC transporter, permease protein K11709 troD; manganese/zinc/iron transport system permease protein D CPE1_0423 ABC transporter, ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D CPE1_0516 putative permease K09808 lolC_E; lipoprotein-releasing system permease protein D CPE1_0517 ABC transporter, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CPE1_0735 putative permease K07091 lptF; lipopolysaccharide export system permease protein D CPE1_0736 putative permease, YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D CPE1_0020 putative ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] C 02060 Phosphotransferase system (PTS) [PATH:cpeo02060] D CPE1_0327 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CPE1_0326 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D CPE1_0339 PTS system, IIBC component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D CPE1_0340 PTS system, IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:cpeo03070] D CPE1_0042 type III secretion system protein K03219 yscC; type III secretion protein C D CPE1_0443 type III secretion system protein K04058 yscW; type III secretion protein W D CPE1_0894 type III secretion protein K03222 yscJ; type III secretion protein J D CPE1_0897 type III secretion system protein K03226 yscR; type III secretion protein R D CPE1_0898 type III secretion system protein K03227 yscS; type III secretion protein S D CPE1_0899 type III secretion system protein K03228 yscT; type III secretion protein T D CPE1_0445 type III secretion system protein K03229 yscU; type III secretion protein U D CPE1_0444 lcrD; type III secretion system protein K03230 yscV; type III secretion protein V D CPE1_0037 type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D CPE1_0896 type III secretion system protein K03223 yscL; type III secretion protein L D CPE1_0907 gspD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D D CPE1_0905 gspF; general secretion pathway protein F K02455 gspF; general secretion pathway protein F D CPE1_0906 gspE; general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D CPE1_0183 secD_secF; bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein D CPE1_0662 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D CPE1_0309 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D CPE1_0114 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CPE1_0839 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D CPE1_0457 putative inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CPE1_0884 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CPE1_0757 ftsY; signal recognition particle-docking protein K03110 ftsY; fused signal recognition particle receptor D CPE1_0623 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:cpeo02020] D CPE1_0754 serine proteinase K04771 degP; serine protease Do [EC:3.4.21.107] D CPE1_0414 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D CPE1_0359 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D CPE1_0458 dnaA_1; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D CPE1_0079 uhpC; sugar phosphate sensor protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D CPE1_0162 putative 2-component regulatory system-sensor histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D CPE1_0160 sigma-54 dependent DNA-binding response regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D CPE1_0947 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D CPE1_0635 cydA; cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CPE1_0634 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:cpeo02024] D CPE1_0483 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter D CPE1_0854 ribD; riboflavin biosynthesis protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CPE1_0573 oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CPE1_0574 oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CPE1_0578 peptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein D CPE1_0580 peptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D CPE1_0579 peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CPE1_0145 oligopeptide ABC transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CPE1_0576 peptide ABC transporter, periplasmic peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CPE1_0575 peptide ABC transporter, periplasmic binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CPE1_0146 oppB; oligopeptide permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CPE1_0147 oppC; oligopeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CPE1_0064 dppD; putative peptide ABC transport ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CPE1_0457 putative inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D CPE1_0183 secD_secF; bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein D CPE1_0662 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D CPE1_0309 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D CPE1_0114 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CPE1_0839 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D CPE1_0884 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CPE1_0757 ftsY; signal recognition particle-docking protein K03110 ftsY; fused signal recognition particle receptor D CPE1_0623 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D CPE1_0040 type III secretion protein K02417 fliN; flagellar motor switch protein FliN C 02040 Flagellar assembly [PATH:cpeo02040] D CPE1_0865 type III secretion system protein K02409 fliF; flagellar M-ring protein FliF D CPE1_0866 type III secretion system protein K02411 fliH; flagellar assembly protein FliH D CPE1_0867 type III secretion system ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CPE1_0040 type III secretion protein K02417 fliN; flagellar motor switch protein FliN D CPE1_0413 type III secretion system protein K02400 flhA; flagellar biosynthesis protein FlhA D CPE1_0957 sigA; RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor D CPE1_0947 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D CPE1_0414 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CPE1_0922 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:cpeo01501] D CPE1_0573 oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CPE1_0574 oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CPE1_0578 peptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein D CPE1_0580 peptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D CPE1_0579 peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CPE1_0364 putative penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:cpeo01502] D CPE1_0817 murC; bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CPE1_0823 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CPE1_0822 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CPE1_0818 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cpeo01503] D CPE1_0366 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CPE1_0754 serine proteinase K04771 degP; serine protease Do [EC:3.4.21.107] D CPE1_0093 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:cpeo01000] C 01001 Protein kinases [BR:cpeo01001] D CPE1_0642 pknD; serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CPE1_0074 putative sigma regulatory factor-histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D CPE1_0162 putative 2-component regulatory system-sensor histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:cpeo01009] D CPE1_0583 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CPE1_0387 protein phosphatase 2C family protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:cpeo01002] D CPE1_0215 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D CPE1_0547 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CPE1_0564 incA; inclusion membrane protein A K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CPE1_0760 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CPE1_0385 hypothetical protein K07052 K07052; CAAX protease family protein D CPE1_0607 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D CPE1_0771 ide; insulinase family-protein K01408 IDE; insulysin [EC:3.4.24.56] D CPE1_0752 putative metalloprotease K06972 PITRM1; presequence protease [EC:3.4.24.-] D CPE1_0398 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CPE1_0722 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CPE1_0909 putative peptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D CPE1_0597 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D CPE1_0733 ftsH; cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CPE1_0427 putative metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D CPE1_0754 serine proteinase K04771 degP; serine protease Do [EC:3.4.21.107] D CPE1_0072 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CPE1_0230 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CPE1_0879 clpP; ATP-dependent Clp protease, proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CPE1_0318 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D CPE1_0628 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CPE1_0193 putative exported protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] C 01003 Glycosyltransferases [BR:cpeo01003] D CPE1_0781 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] C 01005 Lipopolysaccharide biosynthesis proteins [BR:cpeo01005] D CPE1_0093 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CPE1_0763 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CPE1_0091 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D CPE1_0465 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CPE1_0221 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CPE1_0639 putative lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D CPE1_0588 gseA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CPE1_0022 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CPE1_0529 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D CPE1_0224 hypothetical protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cpeo01011] D CPE1_0176 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CPE1_0744 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CPE1_0817 murC; bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CPE1_0821 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CPE1_0365 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CPE1_0822 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CPE1_0818 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CPE1_0014 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase D CPE1_0364 putative penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CPE1_0072 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CPE1_0564 incA; inclusion membrane protein A K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CPE1_0366 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:cpeo01004] D CPE1_0470 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CPE1_0469 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CPE1_0807 fabF; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CPE1_0471 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CPE1_0686 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CPE1_0092 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CPE1_0378 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CPE1_0770 glycerol-3-phosphate acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CPE1_0767 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CPE1_0178 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CPE1_0802 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:cpeo01006] D CPE1_0965 ispA; geranylgeranyl transferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CPE1_0181 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CPE1_0812 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CPE1_0501 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:cpeo01007] D CPE1_0188 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CPE1_0415 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CPE1_0920 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CPE1_0795 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CPE1_0177 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CPE1_0616 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CPE1_0629 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CPE1_0643 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CPE1_0589 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CPE1_0796 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CPE1_0081 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CPE1_0080 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CPE1_0855 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CPE1_0249 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CPE1_0916 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CPE1_0831 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CPE1_0739 pheS; phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CPE1_0150 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CPE1_0006 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CPE1_0254 putative aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D CPE1_0688 bioF; putative 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CPE1_0800 bioF1; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CPE1_0690 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CPE1_0602 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:cpeo03000] D CPE1_0859 birA; biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CPE1_0677 trpR; Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D CPE1_0062 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CPE1_0571 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D CPE1_0248 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor D CPE1_0603 hypothetical protein K07735 algH; putative transcriptional regulator D CPE1_0216 dksA; DnaK suppressor K06204 dksA; RNA polymerase-binding transcription factor D CPE1_0217 nrdR; transcriptional regulator, NrdR family K07738 nrdR; transcriptional repressor NrdR C 03021 Transcription machinery [BR:cpeo03021] D CPE1_0117 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CPE1_0656 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CPE1_0655 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CPE1_0957 sigA; RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor D CPE1_0947 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D CPE1_0414 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D CPE1_0451 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D CPE1_0743 nusB; putative transcription termination-related protein K03625 nusB; transcription antitermination protein NusB D CPE1_0661 nusG; transcription termination/antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D CPE1_0923 putative regulatory protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D CPE1_0074 putative sigma regulatory factor-histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D CPE1_0216 dksA; DnaK suppressor K06204 dksA; RNA polymerase-binding transcription factor D CPE1_0135 rho; transcription termination factor K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:cpeo03019] D CPE1_0769 putative ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-] D CPE1_0333 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CPE1_0245 ribonuclease family protein K12573 rnr; ribonuclease R [EC:3.1.13.1] D CPE1_0922 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CPE1_0732 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CPE1_0135 rho; transcription termination factor K03628 rho; transcription termination factor Rho D CPE1_0583 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CPE1_0246 dnaK; molecular chaperone K04043 dnaK; molecular chaperone DnaK D CPE1_0609 groEL; chaperonin, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CPE1_0941 groEL_1; chaperonin, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CPE1_0762 poly A polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CPE1_0881 pcnB; poly A polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] C 03041 Spliceosome C 03011 Ribosome [BR:cpeo03011] D CPE1_0452 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CPE1_0051 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CPE1_0102 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CPE1_0012 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CPE1_0112 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CPE1_0777 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CPE1_0197 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CPE1_0109 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CPE1_0519 rspI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CPE1_0199 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CPE1_0116 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CPE1_0196 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CPE1_0115 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CPE1_0791 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CPE1_0731 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CPE1_0622 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CPE1_0105 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CPE1_0776 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CPE1_0100 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CPE1_0959 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CPE1_0320 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CPE1_0659 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CPE1_0099 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CPE1_0096 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CPE1_0097 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CPE1_0108 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CPE1_0110 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CPE1_0775 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CPE1_0658 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CPE1_0660 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CPE1_0657 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CPE1_0518 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CPE1_0106 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CPE1_0113 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CPE1_0103 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CPE1_0118 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CPE1_0111 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CPE1_0620 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CPE1_0740 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CPE1_0203 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CPE1_0101 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CPE1_0098 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CPE1_0107 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CPE1_0204 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CPE1_0440 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CPE1_0104 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CPE1_0626 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CPE1_0515 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CPE1_0741 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CPE1_0792 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CPE1_0779 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CPE1_0841 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CPE1_0843 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CPE1_0842 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:cpeo03009] D CPE1_0333 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CPE1_0205 obgE; GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-] D CPE1_0216 dksA; DnaK suppressor K06204 dksA; RNA polymerase-binding transcription factor D CPE1_0451 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D CPE1_0743 nusB; putative transcription termination-related protein K03625 nusB; transcription antitermination protein NusB D CPE1_0661 nusG; transcription termination/antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D CPE1_0303 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CPE1_0071 RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CPE1_0140 hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D CPE1_0362 mraW; S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CPE1_0401 yabC_1; SAM-dependent methytransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CPE1_0219 putative SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D CPE1_0861 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D CPE1_0382 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D CPE1_0025 rluD; ribosomal large chain pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CPE1_0514 putative tRNA modification enzyme K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D CPE1_0769 putative ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-] D CPE1_0527 putative holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D CPE1_0882 engA; GTP-binding protein K03977 engA; GTPase D CPE1_0268 GTP binding protein K03665 hflX; GTPase D CPE1_0497 SUA5 family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CPE1_0449 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D CPE1_0808 hypothetical protein K09710 ybeB; ribosome-associated protein D CPE1_0240 hypothetical protein K07042 ybeY; probable rRNA maturation factor D CPE1_0446 ychF; putative GTP-binding protein K06942 ychF; ribosome-binding ATPase D CPE1_0768 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:cpeo03016] D CPE1_0316 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D CPE1_0188 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CPE1_0249 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CPE1_0629 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CPE1_0589 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CPE1_0616 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CPE1_0177 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CPE1_0796 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CPE1_0081 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CPE1_0831 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CPE1_0916 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CPE1_0855 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CPE1_0795 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CPE1_0643 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CPE1_0080 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CPE1_0739 pheS; phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CPE1_0150 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CPE1_0415 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CPE1_0920 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CPE1_0258 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CPE1_0747 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D CPE1_0167 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CPE1_0448 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D CPE1_0388 aminotransferase class-V family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CPE1_0863 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CPE1_0497 SUA5 family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CPE1_0812 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CPE1_0887 trmE; tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D CPE1_0127 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CPE1_0803 Inositol monophosphatase family protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CPE1_0793 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D CPE1_0783 glycyl-tRNA synthetase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14] D CPE1_0730 cytidine/deoxycytidylate deaminase family protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D CPE1_0950 dihydrouridine synthase family protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D CPE1_0269 hypothetical protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D CPE1_0621 trmD; tRNA (Guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CPE1_0083 putative rRNA methylase, spoU family protein K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D CPE1_0220 spoU rRNA methylase family protein K03437 spoU; RNA methyltransferase, TrmH family D CPE1_0345 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CPE1_0507 PP-loop type ATPase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D CPE1_0539 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D CPE1_0734 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D CPE1_0572 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D CPE1_0087 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D CPE1_0245 ribonuclease family protein K12573 rnr; ribonuclease R [EC:3.1.13.1] D CPE1_0732 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:cpeo03012] D CPE1_0450 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CPE1_0742 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CPE1_0050 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D CPE1_0664 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D CPE1_0198 fusA; translation elongation factor G K02355 fusA; elongation factor G D CPE1_0625 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D CPE1_0048 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D CPE1_0624 hemK; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CPE1_0778 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CPE1_0666 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D CPE1_0828 efp; elongation factor P K02356 efp; elongation factor P D CPE1_0562 elongation factor P K02356 efp; elongation factor P D CPE1_0171 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:cpeo03110] D CPE1_0598 clpB; ATP-dependent Clp protease, subunit B K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D CPE1_0346 clpC; ATP-dependent Clp protease, ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D CPE1_0880 clpX; ATP-dependent Clp protease, ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D CPE1_0246 dnaK; molecular chaperone K04043 dnaK; molecular chaperone DnaK D CPE1_0609 groEL; chaperonin, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CPE1_0941 groEL_1; chaperonin, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CPE1_0321 dnaJ; molecular chaperone K03686 dnaJ; molecular chaperone DnaJ D CPE1_0247 grpE; heat shock protein K03687 GRPE; molecular chaperone GrpE D CPE1_0608 groES; chaperonin, 10 kDa K04078 groES; chaperonin GroES D CPE1_0754 serine proteinase K04771 degP; serine protease Do [EC:3.4.21.107] D CPE1_0733 ftsH; cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CPE1_0084 trxA; thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:cpeo04131] D CPE1_0125 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CPE1_0119 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CPE1_0862 pgmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CPE1_0640 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:cpeo03032] D CPE1_0368 histone-like DNA-binding protein K05788 ihfB; integration host factor subunit beta D CPE1_0359 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D CPE1_0458 dnaA_1; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D CPE1_0128 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CPE1_0786 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CPE1_0397 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CPE1_0078 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CPE1_0430 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CPE1_0400 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CPE1_0374 dnaQ_1; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CPE1_0088 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CPE1_0329 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPE1_0495 dnaX_1; DNA polymerase III subunit delta' K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPE1_0619 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CPE1_0295 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D CPE1_0593 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CPE1_0028 DNA gyrase/topoisomerase IV, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CPE1_0493 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CPE1_0029 DNA topoisomerase IV, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CPE1_0492 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CPE1_0949 topA; DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:cpeo03036] D CPE1_0333 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CPE1_0368 histone-like DNA-binding protein K05788 ihfB; integration host factor subunit beta D CPE1_0359 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D CPE1_0458 dnaA_1; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D CPE1_0364 putative penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CPE1_0845 ftsK; cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CPE1_0819 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW D CPE1_0366 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CPE1_0875 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CPE1_0858 putative cell shape-determining protein K05837 rodA; rod shape determining protein RodA D CPE1_0917 hypothetical protein K03496 parA; chromosome partitioning protein D CPE1_0062 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CPE1_0127 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CPE1_0315 site-specific recombinase, phage integrase family K03733 xerC; integrase/recombinase XerC D CPE1_0705 xerD; site-specific tyrosine recombinase K04763 xerD; integrase/recombinase XerD C 03400 DNA repair and recombination proteins [BR:cpeo03400] D CPE1_0148 ada; putative DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CPE1_0945 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CPE1_0244 methylpurine-DNA glycosylase family protein K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D CPE1_0383 putative adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CPE1_0888 putative endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CPE1_0338 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CPE1_0013 putative endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CPE1_0184 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CPE1_0593 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CPE1_0641 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D CPE1_0921 uvrB; excinuclease ABC, subunit B K03702 uvrB; excinuclease ABC subunit B D CPE1_0788 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D CPE1_0946 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CPE1_0656 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CPE1_0655 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CPE1_0117 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CPE1_0832 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CPE1_0787 mutS; DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS D CPE1_0910 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D CPE1_0307 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CPE1_0306 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CPE1_0078 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CPE1_0430 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CPE1_0400 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CPE1_0374 dnaQ_1; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CPE1_0088 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CPE1_0329 dnaX; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPE1_0495 dnaX_1; DNA polymerase III subunit delta' K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CPE1_0397 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CPE1_0008 recB; exodeoxyribonuclease V, subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D CPE1_0009 recC; exodeoxyribonuclease V, subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D CPE1_0615 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CPE1_0961 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CPE1_0956 recA; recombinase A K03553 recA; recombination protein RecA D CPE1_0124 ruvA; Holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA D CPE1_0393 ruvB; Holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CPE1_0123 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CPE1_0799 priA; primosome protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CPE1_0332 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D CPE1_0429 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF D CPE1_0156 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CPE1_0468 recR; recombination protein RecR K06187 recR; recombination protein RecR D CPE1_0028 DNA gyrase/topoisomerase IV, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CPE1_0493 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CPE1_0029 DNA topoisomerase IV, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CPE1_0492 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CPE1_0949 topA; DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CPE1_0368 histone-like DNA-binding protein K05788 ihfB; integration host factor subunit beta D CPE1_0749 nrdA; ribonucleotide-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CPE1_0748 nrdB; ribonucleotide-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:cpeo03029] D CPE1_0450 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CPE1_0742 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CPE1_0050 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D CPE1_0664 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D CPE1_0198 fusA; translation elongation factor G K02355 fusA; elongation factor G D CPE1_0415 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CPE1_0589 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CPE1_0081 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CPE1_0177 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CPE1_0290 gatA; glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CPE1_0291 gatB; glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CPE1_0289 gatC; glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CPE1_0397 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CPE1_0467 putative outer membrane protein, OMP85-like protein K07277 SAM50; outer membrane protein insertion porin family D CPE1_0246 dnaK; molecular chaperone K04043 dnaK; molecular chaperone DnaK D CPE1_0247 grpE; heat shock protein K03687 GRPE; molecular chaperone GrpE D CPE1_0609 groEL; chaperonin, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CPE1_0941 groEL_1; chaperonin, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CPE1_0608 groES; chaperonin, 10 kDa K04078 groES; chaperonin GroES D CPE1_0321 dnaJ; molecular chaperone K03686 dnaJ; molecular chaperone DnaJ D CPE1_0388 aminotransferase class-V family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CPE1_0863 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CPE1_0457 putative inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:cpeo02000] D CPE1_0718 putative ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D CPE1_0534 ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D CPE1_0599 putative ABC transporter, periplasmic substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CPE1_0601 ABC transporter, permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CPE1_0600 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D CPE1_0265 amino acid ABC transporter, periplasmic amino acid-binding protein K09996 artJ; arginine transport system substrate-binding protein D CPE1_0570 glnP; amino acid ABC transporter, permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein D CPE1_0569 amino acid ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D CPE1_0488 lipoprotein, NPLA family K02073 metQ; D-methionine transport system substrate-binding protein D CPE1_0487 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein D CPE1_0486 ABC transporter, ATP-binding component K02071 metN; D-methionine transport system ATP-binding protein D CPE1_0141 putative periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CPE1_0573 oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CPE1_0574 oligopeptide binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CPE1_0578 peptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein D CPE1_0580 peptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D CPE1_0579 peptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CPE1_0145 oligopeptide ABC transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CPE1_0576 peptide ABC transporter, periplasmic peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CPE1_0575 peptide ABC transporter, periplasmic binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CPE1_0146 oppB; oligopeptide permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CPE1_0147 oppC; oligopeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CPE1_0064 dppD; putative peptide ABC transport ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CPE1_0208 solute binding protein K09815 znuA; zinc transport system substrate-binding protein D CPE1_0206 putative transport protein K09816 znuB; zinc transport system permease protein D CPE1_0207 ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CPE1_0422 ABC transporter, periplasmic substrate-binding protein, putative K11707 troA; manganese/zinc/iron transport system substrate-binding protein D CPE1_0424 ABC transporter, permease protein, putative K11708 troC; manganese/zinc/iron transport system permease protein D CPE1_0425 ABC transporter, permease protein K11709 troD; manganese/zinc/iron transport system permease protein D CPE1_0423 ABC transporter, ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D CPE1_0735 putative permease K07091 lptF; lipopolysaccharide export system permease protein D CPE1_0736 putative permease, YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D CPE1_0020 putative ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D CPE1_0516 putative permease K09808 lolC_E; lipoprotein-releasing system permease protein D CPE1_0517 ABC transporter, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CPE1_0057 sufC; FeS assembly ATPase K09013 sufC; Fe-S cluster assembly ATP-binding protein D CPE1_0079 uhpC; sugar phosphate sensor protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D CPE1_0327 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CPE1_0326 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D CPE1_0339 PTS system, IIBC component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D CPE1_0340 PTS system, IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D CPE1_0481 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D CPE1_0933 biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD D CPE1_0932 putative transport protein K03562 tolQ; biopolymer transport protein TolQ D CPE1_0390 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CPE1_0239 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CPE1_0053 ompA; major outer membrane protein K03162 ompA; major outer membrane protein D CPE1_0871 putative outer membrane protein K08719 K08719; outer membrane protein B D CPE1_0467 putative outer membrane protein, OMP85-like protein K07277 SAM50; outer membrane protein insertion porin family D CPE1_0700 amino acid permease K03758 arcD; arginine:ornithine antiporter / lysine permease D CPE1_0483 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter D CPE1_0759 tyrP; aromatic amino acid transport protein K03834 tyrP; tyrosine-specific transport protein D CPE1_0716 sulfate transporter family protein K03321 TC.SULP; sulfate permease, SulP family D CPE1_0014 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase D CPE1_0541 hypothetical protein K09125 yhhQ; queuosine precursor transporter D CPE1_0721 putative membrane protein K05595 marC; multiple antibiotic resistance protein D CPE1_0819 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW D CPE1_0936 ompA family protein K03640 pal; peptidoglycan-associated lipoprotein D CPE1_0935 tolB; translocation protein K03641 tolB; TolB protein C 02044 Secretion system [BR:cpeo02044] D CPE1_0907 gspD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D D CPE1_0906 gspE; general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D CPE1_0905 gspF; general secretion pathway protein F K02455 gspF; general secretion pathway protein F D CPE1_0951 hypothetical protein K02221 yggT; YggT family protein D CPE1_0042 type III secretion system protein K03219 yscC; type III secretion protein C D CPE1_0894 type III secretion protein K03222 yscJ; type III secretion protein J D CPE1_0896 type III secretion system protein K03223 yscL; type III secretion protein L D CPE1_0037 type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D CPE1_0897 type III secretion system protein K03226 yscR; type III secretion protein R D CPE1_0898 type III secretion system protein K03227 yscS; type III secretion protein S D CPE1_0899 type III secretion system protein K03228 yscT; type III secretion protein T D CPE1_0445 type III secretion system protein K03229 yscU; type III secretion protein U D CPE1_0444 lcrD; type III secretion system protein K03230 yscV; type III secretion protein V D CPE1_0443 type III secretion system protein K04058 yscW; type III secretion protein W D CPE1_0413 type III secretion system protein K02400 flhA; flagellar biosynthesis protein FlhA D CPE1_0865 type III secretion system protein K02409 fliF; flagellar M-ring protein FliF D CPE1_0866 type III secretion system protein K02411 fliH; flagellar assembly protein FliH D CPE1_0867 type III secretion system ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CPE1_0040 type III secretion protein K02417 fliN; flagellar motor switch protein FliN D CPE1_0884 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CPE1_0183 secD_secF; bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein D CPE1_0662 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D CPE1_0309 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D CPE1_0114 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CPE1_0623 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CPE1_0757 ftsY; signal recognition particle-docking protein K03110 ftsY; fused signal recognition particle receptor D CPE1_0839 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D CPE1_0457 putative inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:cpeo02042] D CPE1_0390 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CPE1_0239 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:cpeo02022] D CPE1_0162 putative 2-component regulatory system-sensor histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D CPE1_0160 sigma-54 dependent DNA-binding response regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC C 02035 Bacterial motility proteins [BR:cpeo02035] D CPE1_0866 type III secretion system protein K02411 fliH; flagellar assembly protein FliH D CPE1_0867 type III secretion system ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CPE1_0413 type III secretion system protein K02400 flhA; flagellar biosynthesis protein FlhA D CPE1_0040 type III secretion protein K02417 fliN; flagellar motor switch protein FliN D CPE1_0865 type III secretion system protein K02409 fliF; flagellar M-ring protein FliF D CPE1_0414 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:cpeo04812] D CPE1_0875 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CPE1_0917 hypothetical protein K03496 parA; chromosome partitioning protein D CPE1_0062 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:cpeo04147] D CPE1_0922 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CPE1_0119 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CPE1_0067 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CPE1_0640 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CPE1_0939 antioxidant, AhpC/Tsa family K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D CPE1_0609 groEL; chaperonin, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CPE1_0941 groEL_1; chaperonin, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CPE1_0246 dnaK; molecular chaperone K04043 dnaK; molecular chaperone DnaK D CPE1_0704 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CPE1_0546 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CPE1_0664 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D CPE1_0258 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CPE1_0521 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CPE1_0719 adk_1; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CPE1_0271 glgB; 1,4-alpha-glucan branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CPE1_0001 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CPE1_0892 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CPE1_0526 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CPE1_0308 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CPE1_0862 pgmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:cpeo02048] D CPE1_0875 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CPE1_0188 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CPE1_0388 aminotransferase class-V family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CPE1_0863 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cpeo00537] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:cpeo03100] D CPE1_0005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CPE1_0532 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CPE1_0940 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPE1_0023 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPE1_0159 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPE1_0367 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CPE1_0611 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CPE1_0504 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CPE1_0824 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CPE1_0780 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CPE1_0047 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CPE1_0052 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CPE1_0877 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CPE1_0844 tRNA-His K14226 tRNA-His; tRNA His D CPE1_0533 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CPE1_0154 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPE1_0085 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPE1_0121 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPE1_0164 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPE1_0707 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CPE1_0046 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CPE1_0669 tRNA-Met K14230 tRNA-Met; tRNA Met D CPE1_0586 tRNA-Met K14230 tRNA-Met; tRNA Met D CPE1_0587 tRNA-Met K14230 tRNA-Met; tRNA Met D CPE1_0202 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CPE1_0412 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CPE1_0966 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CPE1_0738 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CPE1_0129 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CPE1_0209 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CPE1_0300 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CPE1_0509 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CPE1_0043 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CPE1_0665 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CPE1_0663 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CPE1_0510 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CPE1_0505 tRNA-Val K14237 tRNA-Val; tRNA Val D CPE1_0746 tRNA-Val K14237 tRNA-Val; tRNA Val D CPE1_0843 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CPE1_0842 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CPE1_0841 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CPE1_0797 hypothetical protein K01829 dsbH; disulfide reductase [EC:1.8.-.-] D CPE1_0090 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D CPE1_0456 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D CPE1_0432 apbE; Thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D CPE1_0636 hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D CPE1_0044 putative ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D CPE1_0930 deoxyribonuclease, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CPE1_0310 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CPE1_0082 mip; peptidyl-prolyl cis-trans isomerase mip precursor K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D CPE1_0002 nqrA; Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D CPE1_0356 nqrB; Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D CPE1_0355 nqrC; Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D CPE1_0354 nqrD; Na(+)-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D CPE1_0353 nqrE; Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D CPE1_0840 nqrF; NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D CPE1_0857 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D CPE1_0864 putative NifU-related protein K13819 K13819; NifU-like protein C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others D CPE1_0496 phospholipase/carboxylesterase family protein K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation C 99975 Protein processing D CPE1_0045 hypothetical protein K19411 mcsA; protein arginine kinase activator D CPE1_0878 tig; trigger factor K03545 tig; trigger factor D CPE1_0431 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein C 99976 Replication and repair D CPE1_0751 rmuC; DNA recombination protein K09760 rmuC; DNA recombination protein RmuC C 99979 Viral proteins C 99998 Others D CPE1_0435 late transcription unit B protein K08275 ltuB; late transcription unit B protein D CPE1_0328 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CPE1_0131 ADP/ATP carrier protein K03301 TC.AAA; ATP:ADP antiporter, AAA family D CPE1_0420 adt_1; ADP/ATP carrier protein K03301 TC.AAA; ATP:ADP antiporter, AAA family D CPE1_0066 putative phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D CPE1_0261 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family D CPE1_0477 sodium symporter-family membrane transport protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CPE1_0222 gltP; putative glutamate symport protein K03309 TC.DAACS; dicarboxylate/amino acid:cation (Na+ or H+) symporter, DAACS family D CPE1_0214 sodium/alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CPE1_0849 sodium/alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CPE1_0889 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D CPE1_0582 sodium:sulfate symporter family protein K03319 TC.DASS; divalent anion:Na+ symporter, DASS family C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins D CPE1_0631 phosphate starvation-inducible protein K07175 phoH2; PhoH-like ATPase C 99992 Structural proteins D CPE1_0466 putative OmpH-like membrane protein K06142 hlpA; outer membrane protein C 99994 Others D CPE1_0815 putative divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein B B 09194 Poorly characterized C 99996 General function prediction only D CPE1_0058 putative ABC transport protein K09015 sufD; Fe-S cluster assembly protein SufD D CPE1_0566 ribonuclease BN family protein K07058 K07058; membrane protein D CPE1_0235 hypothetical protein K07081 K07081; putative periplasmic solute-binding protein D CPE1_0011 hypothetical protein K07146 K07146; UPF0176 protein C 99997 Function unknown D CPE1_0301 hypothetical protein K06888 K06888; uncharacterized protein D CPE1_0584 dienelactone hydrolase family protein K06889 K06889; uncharacterized protein D CPE1_0590 hypothetical protein K06889 K06889; uncharacterized protein D CPE1_0758 hypothetical protein K06890 K06890; uncharacterized protein D CPE1_0024 hypothetical protein K06960 K06960; uncharacterized protein D CPE1_0816 hypothetical protein K06960 K06960; uncharacterized protein D CPE1_0056 sufB; FeS assembly protein K07033 K07033; uncharacterized protein D CPE1_0508 protein translocase subunit K07039 K07039; uncharacterized protein D CPE1_0169 putative phosphoesterase K07098 K07098; uncharacterized protein D CPE1_0139 hypothetical protein K07099 K07099; uncharacterized protein D CPE1_0847 set domain-containing protein K07117 K07117; uncharacterized protein D CPE1_0225 hypothetical protein K07164 K07164; uncharacterized protein D CPE1_0152 hypothetical protein K08998 K08998; uncharacterized protein D CPE1_0604 hypothetical protein K08999 K08999; uncharacterized protein D CPE1_0252 hypothetical protein K09131 K09131; uncharacterized protein D CPE1_0288 hypothetical protein K09779 K09779; uncharacterized protein D CPE1_0065 hypothetical protein K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 30, 2024