+D GENES KO #

  KEGG Orthology (KO) - Thermoclostridium stercorarium subsp. stercorarium DSM 8532

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:csd00010] D Clst_0277 glk; Glk K25026 glk; glucokinase [EC:2.7.1.2] D Clst_1053 gpi; Gpi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Clst_1437 pfk1; Pfk K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clst_0642 pfk; Pfk K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Clst_2032 pfk2; Pfk K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Clst_0927 fba; Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Clst_1986 tpi; Tpi K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Clst_1988 gap; Gap K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clst_1987 pgk; Pgk K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Clst_0422 pgm1; Pgm K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Clst_1985 pgm4; Pgm K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Clst_0600 pgm2; Pgm K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Clst_2054 eno; Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Clst_2229 pyk; Pyk K00873 PK; pyruvate kinase [EC:2.7.1.40] D Clst_1933 ppdK; PpdK K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Clst_0828 pdhA; PdhA K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Clst_0829 pdhD; PdhD K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clst_0646 por1; Por K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clst_1401 por2; Por K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clst_1201 pyruvate-ferredoxin oxidoreductase alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clst_1202 pyruvate-ferredoxin oxidoreductase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clst_2023 ldh; Ldh K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clst_1812 adhE; AdhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clst_0095 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Clst_2077 ald; Ald K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clst_0810 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Clst_1411 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clst_0968 pck; Pck K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:csd00020] D Clst_2252 gltA2; GltA K01647 CS; citrate synthase [EC:2.3.3.1] D Clst_1094 gltA1; GltA K01647 CS; citrate synthase [EC:2.3.3.1] D Clst_0730 acnA; AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Clst_0731 icd; Icd K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Clst_0829 pdhD; PdhD K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clst_1201 pyruvate-ferredoxin oxidoreductase alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clst_1202 pyruvate-ferredoxin oxidoreductase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clst_1203 pyruvate-ferredoxin oxidoreductase gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Clst_1200 formate hydrogenlyase subunit 6 K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Clst_1116 hydrolyase alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Clst_1198 hydrolyase beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Clst_0968 pck; Pck K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Clst_0828 pdhA; PdhA K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Clst_0646 por1; Por K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clst_1401 por2; Por K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:csd00030] D Clst_1053 gpi; Gpi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Clst_1190 zwf; Zwf K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Clst_2416 gnd; Gnd K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Clst_1970 rpe; Rpe K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Clst_1011 trkA1; TrkA K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clst_1012 trkB1; TrkB K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clst_2184 trkB2; TrkB K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clst_2185 trkA2; TrkA K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clst_2453 rpiB; RpiB K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Clst_0885 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Clst_2270 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Clst_1411 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clst_1352 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Clst_2394 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Clst_0782 eda; Eda K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Clst_0783 gck1; Gck K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D Clst_2417 gck2; Gck K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D Clst_0927 fba; Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Clst_1437 pfk1; Pfk K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clst_0642 pfk; Pfk K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Clst_2032 pfk2; Pfk K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:csd00040] D Clst_2537 pectin methylesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D Clst_0166 pelA; PelA K22994 pelX; pectate disaccharide-lyase [EC:4.2.2.9] D Clst_1660 galacturonate lyase K01730 ogl; oligogalacturonide lyase [EC:4.2.2.6] D Clst_0846 4-deoxy-L-threo-5-hexulose uronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D Clst_0847 alcohol dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D Clst_0811 alpha-galactosidase K22933 lplD; galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67] D Clst_2021 uxaC; UxaC K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D Clst_0813 D-altronate dehydratase K01685 uxaA; altronate hydrolase [EC:4.2.1.7] D Clst_0438 uxuA; UxuA K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D Clst_0019 mtlD; MtlD K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D Clst_0814 hypothetical protein K21619 uxaE; tagaturonate epimerase [EC:5.1.2.7] D Clst_1342 galactosidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D Clst_0310 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clst_0095 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Clst_1558 sgbE; SgbE K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D Clst_1970 rpe; Rpe K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Clst_1561 araA; AraA K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D Clst_1559 araB; AraB K00853 araB; L-ribulokinase [EC:2.7.1.16] D Clst_0875 xyk; Xyk K00854 xylB; xylulokinase [EC:2.7.1.17] D Clst_0877 xyi; Xyi K01805 xylA; xylose isomerase [EC:5.3.1.5] D Clst_0833 xylulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D Clst_2209 ribulose-5-phosphate 4-epimerase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:csd00051] D Clst_1086 xylanase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Clst_1161 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Clst_1523 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Clst_0065 nucleotidyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Clst_1512 GDP-mannose 4-6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D Clst_1513 nucleoside-diphosphate-sugar epimerase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D Clst_2209 ribulose-5-phosphate 4-epimerase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D Clst_0621 L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14] D Clst_0833 xylulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D Clst_1437 pfk1; Pfk K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clst_0642 pfk; Pfk K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Clst_2032 pfk2; Pfk K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Clst_0831 adh4; Adh K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140] D Clst_0827 adh3; Adh K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-] D Clst_1160 fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D Clst_0877 xyi; Xyi K01805 xylA; xylose isomerase [EC:5.3.1.5] D Clst_0927 fba; Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Clst_1986 tpi; Tpi K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Clst_2453 rpiB; RpiB K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:csd00052] D Clst_0810 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D Clst_2189 galK; GalK K00849 galK; galactokinase [EC:2.7.1.6] D Clst_2190 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Clst_2188 UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Clst_0310 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clst_1411 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clst_0277 glk; Glk K25026 glk; glucokinase [EC:2.7.1.2] D Clst_0942 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Clst_0588 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Clst_0231 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Clst_0423 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Clst_1586 agaA; AgaA K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Clst_1627 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Clst_1437 pfk1; Pfk K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clst_0642 pfk; Pfk K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Clst_2032 pfk2; Pfk K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Clst_0939 amylase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:csd00053] D Clst_1342 galactosidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D Clst_0095 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Clst_1558 sgbE; SgbE K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D Clst_2077 ald; Ald K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:csd00500] D Clst_0939 amylase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Clst_2162 maltooligosyl trehalose synthase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7] D Clst_0310 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clst_0237 bxlB; BxlB K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Clst_0295 bglZ; BglZ K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Clst_0308 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Clst_1168 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Clst_1823 celZ; CelZ K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clst_0361 cepA; CepA K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20] D Clst_1961 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Clst_1962 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Clst_0589 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D Clst_2112 glycosyltransferase K00703 glgA; starch synthase [EC:2.4.1.21] D Clst_0098 amylase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Clst_0890 maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Clst_0938 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Clst_1783 pullulanase K01200 pulA; pullulanase [EC:3.2.1.41] D Clst_0254 amylase K01178 SGA1; glucoamylase [EC:3.2.1.3] D Clst_1411 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clst_0277 glk; Glk K25026 glk; glucokinase [EC:2.7.1.2] D Clst_1053 gpi; Gpi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:csd00520] D Clst_1301 beta-glucosidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Clst_2100 cepB; CepB K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280] D Clst_1911 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D Clst_2631 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D Clst_1905 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D Clst_2639 pgl2; Pgl K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D Clst_1746 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Clst_1064 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Clst_2395 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Clst_0354 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clst_2081 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clst_2644 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clst_1365 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Clst_2641 N-acyl-D-glucosamine 2-epimerase K01787 RENBP; N-acylglucosamine 2-epimerase [EC:5.1.3.8] D Clst_2449 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Clst_0159 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D Clst_0576 arfB; ArfB K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D Clst_0149 nucleoside-diphosphate-sugar epimerase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D Clst_1519 nucleoside-diphosphate-sugar epimerase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D Clst_0856 bxlA; BxlA K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D Clst_2440 beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D Clst_0277 glk; Glk K25026 glk; glucokinase [EC:2.7.1.2] D Clst_1411 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clst_0310 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clst_2189 galK; GalK K00849 galK; galactokinase [EC:2.7.1.6] D Clst_2190 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Clst_2188 UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Clst_1053 gpi; Gpi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Clst_1161 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Clst_0065 nucleotidyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Clst_1523 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Clst_1512 GDP-mannose 4-6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D Clst_1513 nucleoside-diphosphate-sugar epimerase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D Clst_1961 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Clst_1962 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:csd00620] D Clst_0646 por1; Por K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clst_1401 por2; Por K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clst_1201 pyruvate-ferredoxin oxidoreductase alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clst_1202 pyruvate-ferredoxin oxidoreductase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clst_0828 pdhA; PdhA K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Clst_0829 pdhD; PdhD K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clst_1812 adhE; AdhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clst_0095 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Clst_1243 ackA; Ack K00925 ackA; acetate kinase [EC:2.7.2.1] D Clst_1242 pta; Pta K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Clst_2229 pyk; Pyk K00873 PK; pyruvate kinase [EC:2.7.1.40] D Clst_2077 ald; Ald K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clst_2023 ldh; Ldh K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clst_0591 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Clst_1345 hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Clst_1834 hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Clst_2613 mae; Mle K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Clst_1052 oadA; OadA K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Clst_0601 oadB1; OadB K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Clst_1166 oadB2; OadB K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Clst_1116 hydrolyase alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Clst_1198 hydrolyase beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Clst_0968 pck; Pck K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Clst_1933 ppdK; PpdK K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Clst_1030 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:csd00630] D Clst_2252 gltA2; GltA K01647 CS; citrate synthase [EC:2.3.3.1] D Clst_1094 gltA1; GltA K01647 CS; citrate synthase [EC:2.3.3.1] D Clst_0730 acnA; AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Clst_0307 lactate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Clst_2002 haloacid dehalogenase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Clst_1831 phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Clst_1712 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_1717 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_1837 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_2192 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_0736 glycine-serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Clst_0945 glycine dehydrogenase alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Clst_0946 glycine cleavage system P protein K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Clst_0943 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Clst_0829 pdhD; PdhD K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clst_0944 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Clst_0268 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Clst_0782 eda; Eda K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D Clst_0888 hydrolase K07130 kynB; arylformamidase [EC:3.5.1.9] D Clst_1189 kynurenine formamidase K07130 kynB; arylformamidase [EC:3.5.1.9] C 00640 Propanoate metabolism [PATH:csd00640] D Clst_1243 ackA; Ack K00925 ackA; acetate kinase [EC:2.7.2.1] D Clst_1242 pta; Pta K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Clst_0830 pdhE; PdhE K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D Clst_0829 pdhD; PdhD K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clst_2023 ldh; Ldh K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clst_0074 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D Clst_0320 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:csd00650] D Clst_1812 adhE; AdhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clst_0601 oadB1; OadB K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Clst_1166 oadB2; OadB K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Clst_1051 biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Clst_0602 oadG; OadG K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D Clst_0646 por1; Por K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clst_1401 por2; Por K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clst_1201 pyruvate-ferredoxin oxidoreductase alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clst_1202 pyruvate-ferredoxin oxidoreductase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clst_1335 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clst_1333 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:csd00660] D Clst_1335 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clst_1333 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Clst_1496 isopropylmalate-homocitrate-citramalate synthase K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21] D Clst_1338 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Clst_1337 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Clst_1336 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:csd00562] D Clst_0989 dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D Clst_0986 adh5; Adh K22231 iolM; scyllo-inosose 3-dehydrogenase [EC:1.1.1.-] D Clst_1986 tpi; Tpi K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:csd00190] D Clst_2489 NADH dehydrogenase FAD-containing subunit K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D Clst_0330 H+-ATPase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D Clst_2348 H+-ATPase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D Clst_0331 H+-ATPase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D Clst_2347 H+-ATPase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D Clst_0328 H+-ATPase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D Clst_2353 H+-ATPase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D Clst_0332 ATP synthase K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D Clst_2346 ATP synthase K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D Clst_0327 H+-ATPase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D Clst_2349 H+-ATPase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D Clst_0329 H+-ATPase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D Clst_2350 H+-ATPase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D Clst_0324 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H D Clst_0325 H+-ATPase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D Clst_2352 H+-ATPase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D Clst_0326 ATP synthase subunit C K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D Clst_2351 ATP synthase subunit C K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D Clst_1643 pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:csd00710] D Clst_1987 pgk; Pgk K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Clst_1988 gap; Gap K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clst_0927 fba; Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Clst_1011 trkA1; TrkA K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clst_1012 trkB1; TrkB K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clst_2184 trkB2; TrkB K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clst_2185 trkA2; TrkA K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clst_2453 rpiB; RpiB K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Clst_1986 tpi; Tpi K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Clst_1970 rpe; Rpe K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Clst_1933 ppdK; PpdK K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00720 Other carbon fixation pathways [PATH:csd00720] D Clst_0646 por1; Por K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clst_1401 por2; Por K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Clst_1933 ppdK; PpdK K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Clst_1116 hydrolyase alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Clst_1198 hydrolyase beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Clst_1201 pyruvate-ferredoxin oxidoreductase alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Clst_1202 pyruvate-ferredoxin oxidoreductase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Clst_1203 pyruvate-ferredoxin oxidoreductase gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Clst_1200 formate hydrogenlyase subunit 6 K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Clst_0731 icd; Icd K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Clst_0730 acnA; AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Clst_0105 formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Clst_1414 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Clst_2370 5-10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Clst_1883 CO dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Clst_1242 pta; Pta K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Clst_1243 ackA; Ack K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:csd00680] D Clst_1883 CO dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Clst_0736 glycine-serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Clst_0307 lactate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Clst_2054 eno; Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Clst_0927 fba; Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Clst_1437 pfk1; Pfk K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clst_0642 pfk; Pfk K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Clst_2032 pfk2; Pfk K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Clst_1243 ackA; Ack K00925 ackA; acetate kinase [EC:2.7.2.1] D Clst_1242 pta; Pta K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Clst_0422 pgm1; Pgm K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Clst_1985 pgm4; Pgm K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Clst_0600 pgm2; Pgm K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Clst_1102 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Clst_0483 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00910 Nitrogen metabolism [PATH:csd00910] D Clst_1895 molybdenum-iron nitrogenase alpha subunit K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Clst_1896 molybdenum-iron nitrogenase beta subunit K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clst_1903 iron nitrogenase K02588 nifH; nitrogenase iron protein NifH D Clst_1021 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Clst_0951 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D Clst_1712 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_1717 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_1837 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_2192 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_0501 nfnA; NfnA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] C 00920 Sulfur metabolism [PATH:csd00920] D Clst_1900 ABC transporter periplasmic subunit K15553 ssuA; sulfonate transport system substrate-binding protein D Clst_1901 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D Clst_1902 ABC transporter ATPase subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clst_0174 sulfate adenylyltransferase large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Clst_0173 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Clst_0239 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D Clst_0172 3-2-5-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Clst_1042 exopolyphosphatase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D Clst_0249 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Clst_1889 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clst_1407 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Clst_1891 cystathionine synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:csd00061] D Clst_1110 acyl carrier protein K02078 acpP; acyl carrier protein D Clst_1108 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Clst_1107 3-oxoacyl-acyl-carrier-protein synthase-3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Clst_1111 3-oxoacyl-acyl-carrier-protein synthase-2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Clst_1109 3-oxoacyl-acyl-carrier-protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clst_0040 alcohol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clst_2279 3-hydroxyacyl-acyl-carrier-protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Clst_0895 enoyl-acyl-carrier-protein NADH reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Clst_0597 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clst_1023 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clst_1616 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:csd00071] D Clst_0597 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clst_1023 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clst_1616 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clst_1812 adhE; AdhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clst_2077 ald; Ald K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:csd00561] D Clst_0268 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Clst_2077 ald; Ald K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clst_0095 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Clst_1013 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Clst_2612 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Clst_1625 phosphate-acyl-acyl carrier protein acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Clst_1106 phosphate-acyl-acyl carrier protein acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Clst_1916 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Clst_1458 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Clst_0740 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Clst_1669 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Clst_0423 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Clst_1586 agaA; AgaA K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Clst_1627 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:csd00564] D Clst_1916 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Clst_1458 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Clst_0076 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Clst_1381 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Clst_1104 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Clst_1435 phosphatidylglycerophosphate synthase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] D Clst_1581 glycerol dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] D Clst_1479 glycerol dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] D Clst_1584 glycerol dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:csd00600] D Clst_0942 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Clst_0588 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Clst_0231 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Clst_0423 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Clst_1586 agaA; AgaA K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Clst_1627 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D Clst_1490 lysophospholipase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:csd00230] D Clst_1421 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Clst_2270 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Clst_1411 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clst_1352 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Clst_2394 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Clst_0791 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Clst_2262 glutamine phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Clst_2026 phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Clst_2028 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Clst_1126 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D Clst_2029 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Clst_2030 5-carboxyamino-imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Clst_2374 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Clst_1260 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Clst_2027 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Clst_1793 adenine/guanine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Clst_2106 purine nucleoside phosphorylase-1 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Clst_1996 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Clst_2588 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Clst_1097 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Clst_1296 purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Clst_1535 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D Clst_1396 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Clst_1936 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Clst_2624 ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Clst_0067 ribonucleoside-triphosphate reductase catalytic subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Clst_1330 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D Clst_0355 hydrolase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D Clst_1347 alarmone synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Clst_2182 hypothetical protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D Clst_0796 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D Clst_1718 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Clst_1412 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Clst_2511 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Clst_0243 mazG1; MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Clst_0174 sulfate adenylyltransferase large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Clst_0239 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D Clst_0173 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:csd00240] D Clst_0789 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Clst_2261 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Clst_0790 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Clst_2007 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Clst_2006 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D Clst_0610 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D Clst_0609 2-polyprenylphenol hydroxylase K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D Clst_2005 orotidine-5-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Clst_1322 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Clst_0243 mazG1; MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Clst_0312 MAF protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Clst_1710 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Clst_1459 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Clst_2018 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D Clst_0864 hydrolase K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-] D Clst_2452 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Clst_1412 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Clst_2269 thymidine phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D Clst_1957 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Clst_0067 ribonucleoside-triphosphate reductase catalytic subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Clst_0069 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D Clst_2624 ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Clst_0355 hydrolase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D Clst_2451 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Clst_1192 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Clst_2572 deoxyuridine 5-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Clst_2020 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:csd00250] D Clst_2605 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Clst_1610 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clst_0583 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D Clst_1716 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D Clst_1709 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Clst_1427 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Clst_1428 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Clst_1718 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Clst_1260 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Clst_2007 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Clst_0501 nfnA; NfnA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Clst_0951 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D Clst_1712 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_1717 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_1837 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_2192 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_0789 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Clst_2261 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Clst_0790 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Clst_1746 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Clst_0791 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Clst_2262 glutamine phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:csd00260] D Clst_1244 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clst_1146 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Clst_0288 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Clst_1367 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Clst_0736 glycine-serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Clst_0307 lactate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Clst_0268 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D Clst_0422 pgm1; Pgm K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Clst_1985 pgm4; Pgm K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Clst_0600 pgm2; Pgm K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Clst_1102 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Clst_0483 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Clst_0945 glycine dehydrogenase alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Clst_0946 glycine cleavage system P protein K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Clst_0943 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Clst_0829 pdhD; PdhD K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clst_0944 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Clst_1926 tryptophan synthase alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Clst_1927 tryptophan synthase beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Clst_1965 lyase K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:csd00270] D Clst_0249 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Clst_1889 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Clst_0049 beta-cystathionase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Clst_1892 beta-cystathionase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Clst_2585 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Clst_2237 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Clst_2481 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Clst_2224 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Clst_2225 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Clst_1730 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Clst_1996 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Clst_1152 cytosine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Clst_1663 methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D Clst_1092 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D Clst_2103 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Clst_1244 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clst_1146 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Clst_0288 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Clst_1407 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Clst_1891 cystathionine synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Clst_1899 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Clst_1406 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Clst_1230 aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clst_2023 ldh; Ldh K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clst_1102 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Clst_0483 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:csd00280] D Clst_1230 aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clst_0830 pdhE; PdhE K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D Clst_0829 pdhD; PdhD K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clst_2077 ald; Ald K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:csd00290] D Clst_1496 isopropylmalate-homocitrate-citramalate synthase K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21] D Clst_1338 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Clst_1337 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Clst_1336 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Clst_1335 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clst_1333 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Clst_1332 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Clst_1334 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Clst_1230 aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clst_1030 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:csd00300] D Clst_0288 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Clst_1244 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clst_1146 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Clst_1145 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Clst_1144 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Clst_2355 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Clst_0918 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Clst_0919 diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Clst_1629 aspartate-tyrosine-aromatic aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Clst_1918 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Clst_1878 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16] D Clst_2086 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Clst_2085 UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:csd00310] D Clst_0829 pdhD; PdhD K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clst_1547 L-lysine 2-3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] D Clst_2077 ald; Ald K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:csd00220] D Clst_2174 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Clst_1427 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Clst_1428 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Clst_1712 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_1717 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_1837 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_2192 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_0789 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Clst_2261 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Clst_0790 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Clst_0951 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D Clst_2107 glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D Clst_2581 N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Clst_2580 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Clst_2355 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:csd00330] D Clst_1731 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Clst_1729 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D Clst_2225 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Clst_1730 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Clst_2224 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Clst_1727 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D Clst_2077 ald; Ald K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clst_1423 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Clst_2461 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Clst_1506 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00340 Histidine metabolism [PATH:csd00340] D Clst_2378 ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Clst_2379 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D Clst_2357 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D Clst_2373 1-5-phosphoribosyl-5-5-phosphoribosyl-amino-methylidene-amino-imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Clst_1762 hisH; HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Clst_1763 hisF; HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Clst_2208 imidazoleglycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Clst_2375 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D Clst_0260 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clst_2376 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clst_0596 histidinol phosphate phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D Clst_2377 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D Clst_2077 ald; Ald K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:csd00350] D Clst_0260 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clst_2376 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clst_1812 adhE; AdhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00360 Phenylalanine metabolism [PATH:csd00360] D Clst_0760 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Clst_0226 hypothetical protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D Clst_0260 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clst_2376 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism [PATH:csd00380] D Clst_0888 hydrolase K07130 kynB; arylformamidase [EC:3.5.1.9] D Clst_1189 kynurenine formamidase K07130 kynB; arylformamidase [EC:3.5.1.9] D Clst_0829 pdhD; PdhD K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clst_2077 ald; Ald K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:csd00400] D Clst_1250 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Clst_1251 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Clst_0502 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D Clst_1256 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Clst_1252 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Clst_1253 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Clst_1932 anthranilate synthase subunit 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Clst_1931 glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Clst_1930 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Clst_1928 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Clst_1929 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Clst_1926 tryptophan synthase alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Clst_1927 tryptophan synthase beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Clst_1965 lyase K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Clst_1254 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D Clst_2222 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Clst_0260 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clst_2376 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism D Clst_2077 ald; Ald K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00430 Taurine and hypotaurine metabolism [PATH:csd00430] D Clst_0951 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D Clst_1242 pta; Pta K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Clst_1243 ackA; Ack K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:csd00450] D Clst_1891 cystathionine synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D Clst_0049 beta-cystathionase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Clst_1892 beta-cystathionase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Clst_2585 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Clst_2272 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D Clst_0489 putative alkyl hydroperoxide reductase F subunit K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Clst_2426 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Clst_2333 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Clst_0174 sulfate adenylyltransferase large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Clst_0173 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Clst_1649 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clst_2203 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:csd00460] D Clst_0237 bxlB; BxlB K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Clst_0295 bglZ; BglZ K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Clst_0308 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Clst_1168 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Clst_0583 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D Clst_1716 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D Clst_0736 glycine-serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:csd00470] D Clst_2406 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Clst_1548 Ala-Ala ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clst_2424 Ala-Ala ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clst_2423 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Clst_1450 UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Clst_1610 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Clst_0918 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Clst_1918 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:csd00480] D Clst_0731 icd; Icd K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Clst_2416 gnd; Gnd K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Clst_1190 zwf; Zwf K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Clst_2225 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Clst_1730 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:csd00511] D Clst_0942 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Clst_0588 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Clst_0231 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D Clst_0990 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D Clst_0092 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D Clst_0091 glycoside hydrolase K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:csd00542] D Clst_2450 UDP-N-acetylmuramyl pentapeptide phosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:csd00541] D Clst_0310 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Clst_2188 UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Clst_1161 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Clst_1523 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Clst_1512 GDP-mannose 4-6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D Clst_1513 nucleoside-diphosphate-sugar epimerase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D Clst_2395 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Clst_2449 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Clst_0159 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] C 00550 Peptidoglycan biosynthesis [PATH:csd00550] D Clst_0354 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clst_2081 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clst_2644 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clst_1365 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Clst_2397 UDP-N-acetylmuramate-L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Clst_1450 UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Clst_2086 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Clst_1548 Ala-Ala ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clst_2424 Ala-Ala ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clst_2085 UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Clst_0526 diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66] D Clst_1382 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Clst_2299 uppP; UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clst_2084 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Clst_0774 UDP-N-acetylglucosamine-N-acetylmuramyl-pentapeptide pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Clst_2016 murein polymerase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Clst_0316 ftsI1; FtsI K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Clst_1045 ftsI2; FtsI K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Clst_2087 ftsI3; FtsI K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D Clst_1546 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clst_2067 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clst_1258 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clst_2268 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clst_1032 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clst_1031 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clst_0921 UDP-N-acetylmuramyl tripeptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D Clst_0920 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:csd00552] D Clst_2299 uppP; UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clst_2450 UDP-N-acetylmuramyl pentapeptide phosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Clst_2401 N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Clst_2096 transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Clst_2041 transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Clst_2608 transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Clst_0740 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Clst_1669 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Clst_0137 LPS biosynthesis protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-] D Clst_0147 LPS biosynthesis protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:csd00543] D Clst_2450 UDP-N-acetylmuramyl pentapeptide phosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D Clst_1607 membrane protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D Clst_0064 glycosyltransferase K20999 pslF; polysaccharide biosynthesis protein PslF D Clst_0249 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:csd00730] D Clst_2231 hydroxymethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Clst_1767 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D Clst_1768 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D Clst_0879 nifS; NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clst_1294 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clst_1293 thiI; ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Clst_0663 hydG; HydG K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D Clst_2151 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Clst_1771 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D Clst_1770 thiamine monophosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Clst_1971 GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Clst_1886 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Clst_1969 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D Clst_2511 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:csd00740] D Clst_1044 riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Clst_1771 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D Clst_1421 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:csd00750] D Clst_0483 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Clst_1367 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:csd00760] D Clst_2605 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Clst_1534 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Clst_2604 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Clst_2435 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Clst_2106 purine nucleoside phosphorylase-1 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Clst_1174 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Clst_0243 mazG1; MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Clst_1477 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D Clst_1091 deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Clst_2149 sugar kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:csd00770] D Clst_1335 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Clst_1333 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Clst_1332 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Clst_1334 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Clst_1114 pantothenate kinase K09680 PANK1_2_3; type II pantothenate kinase [EC:2.7.1.33] D Clst_2560 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Clst_0243 mazG1; MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Clst_0749 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Clst_0925 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Clst_2364 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Clst_1230 aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clst_2077 ald; Ald K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:csd00780] D Clst_1111 3-oxoacyl-acyl-carrier-protein synthase-2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Clst_1109 3-oxoacyl-acyl-carrier-protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clst_0040 alcohol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clst_2279 3-hydroxyacyl-acyl-carrier-protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Clst_0895 enoyl-acyl-carrier-protein NADH reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Clst_2256 7-keto-8-aminopelargonate synthetase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Clst_0662 hydE; HydE K01012 bioB; biotin synthase [EC:2.8.1.6] D Clst_2562 airA; BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:csd00785] D Clst_0617 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D Clst_0618 lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D Clst_0829 pdhD; PdhD K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clst_0828 pdhA; PdhA K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Clst_0830 pdhE; PdhE K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D Clst_0945 glycine dehydrogenase alpha subunit K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Clst_0946 glycine cleavage system P protein K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Clst_0943 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Clst_0944 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:csd00790] D Clst_0701 GTP cyclohydrolase-1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D Clst_1886 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Clst_0699 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D Clst_0700 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Clst_0698 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Clst_0640 dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] C 00670 One carbon pool by folate [PATH:csd00670] D Clst_0105 formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Clst_1414 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Clst_0736 glycine-serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Clst_2028 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Clst_2027 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Clst_1303 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Clst_0943 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Clst_2585 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Clst_2020 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Clst_2370 5-10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Clst_1441 5-10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:csd00860] D Clst_2072 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Clst_1431 cob-l-yrinic acid a-c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Clst_1342 galactosidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis D Clst_0234 1-4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:csd00900] D Clst_2151 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Clst_1380 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Clst_0259 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Clst_0116 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Clst_2204 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Clst_1378 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Clst_2153 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Clst_1382 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D Clst_2077 ald; Ald K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Clst_1011 trkA1; TrkA K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clst_1012 trkB1; TrkB K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clst_2184 trkB2; TrkB K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Clst_2185 trkA2; TrkA K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures [PATH:csd01054] D Clst_1610 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:csd00946] D Clst_0237 bxlB; BxlB K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Clst_0295 bglZ; BglZ K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Clst_0308 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Clst_1168 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Clst_1016 alpha-L-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis [PATH:csd00311] D Clst_1394 deacetylase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41] D Clst_0497 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:csd00332] D Clst_2461 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Clst_1506 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:csd00261] D Clst_0174 sulfate adenylyltransferase large subunit K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D Clst_0173 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Clst_1244 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Clst_1146 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Clst_1145 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Clst_1144 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:csd00521] D Clst_0277 glk; Glk K25026 glk; glucokinase [EC:2.7.1.2] D Clst_1411 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Clst_0989 dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Clst_0277 glk; Glk K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis [PATH:csd00401] D Clst_2222 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Clst_0260 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clst_2376 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Clst_1932 anthranilate synthase subunit 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Clst_1931 glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Clst_1108 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Clst_1109 3-oxoacyl-acyl-carrier-protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clst_0040 alcohol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clst_0895 enoyl-acyl-carrier-protein NADH reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Clst_1110 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:csd00999] D Clst_2237 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Clst_2481 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Clst_0237 bxlB; BxlB K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Clst_0295 bglZ; BglZ K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Clst_0308 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D Clst_1168 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D Clst_0601 oadB1; OadB K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Clst_1166 oadB2; OadB K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Clst_1051 biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Clst_0602 oadG; OadG K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:csd00625] D Clst_1812 adhE; AdhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D Clst_2077 ald; Ald K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D Clst_1896 molybdenum-iron nitrogenase beta subunit K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Clst_1903 iron nitrogenase K02588 nifH; nitrogenase iron protein NifH D Clst_1895 molybdenum-iron nitrogenase alpha subunit K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation D Clst_1883 CO dehydrogenase catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation D Clst_0095 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:csd00626] D Clst_1812 adhE; AdhE K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:csd03020] D Clst_0280 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Clst_0281 DNA-directed RNA polymerase beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Clst_2503 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Clst_1935 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D Clst_1019 DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:csd03010] D Clst_1324 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Clst_2525 ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D Clst_2504 ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D Clst_2515 ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D Clst_0118 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Clst_2553 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Clst_2518 ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D Clst_0267 ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D Clst_2532 ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D Clst_2505 ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D Clst_2554 ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D Clst_2506 ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Clst_2668 30S ribosomal protein K02954 RP-S14; small subunit ribosomal protein S14 D Clst_2114 ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D Clst_1149 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Clst_2522 ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D Clst_2593 ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D Clst_2527 ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D Clst_0513 ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D Clst_1349 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Clst_1921 ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D Clst_2528 ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D Clst_2531 ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D Clst_2530 ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D Clst_2519 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Clst_2517 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Clst_1919 ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D Clst_2591 ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D Clst_1920 ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D Clst_1922 ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Clst_0266 ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Clst_2521 ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Clst_2513 ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Clst_2524 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Clst_2502 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Clst_2516 ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D Clst_1981 ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D Clst_1057 ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D Clst_0490 ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D Clst_2526 ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D Clst_2529 ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D Clst_2520 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Clst_0062 ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D Clst_0905 ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D Clst_0492 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Clst_0745 ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D Clst_2523 ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D Clst_2514 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Clst_2187 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Clst_0738 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Clst_1925 ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D Clst_1056 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Clst_2507 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Clst_2555 ribosomal protein K07590 RP-L7A; large subunit ribosomal protein L7A D Clst_0785 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clst_2040 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clst_2658 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clst_2037 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clst_0786 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clst_2655 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clst_0788 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clst_2036 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clst_2654 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:csd00970] D Clst_2039 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clst_0656 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clst_1035 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clst_0169 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clst_2365 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clst_0024 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clst_0761 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clst_2035 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clst_1208 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Clst_2444 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Clst_2441 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Clst_0615 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Clst_1215 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Clst_1207 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clst_2583 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clst_2073 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clst_1034 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clst_0359 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clst_2442 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clst_0614 tRNA-His K14226 tRNA-His; tRNA His D Clst_2657 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Clst_0695 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clst_0012 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clst_1132 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clst_1453 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clst_2003 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clst_0616 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clst_0709 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clst_2584 tRNA-Met K14230 tRNA-Met; tRNA Met D Clst_0013 tRNA-Met K14230 tRNA-Met; tRNA Met D Clst_0762 tRNA-Met K14230 tRNA-Met; tRNA Met D Clst_2443 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Clst_1403 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clst_0867 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clst_0097 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clst_0073 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clst_0193 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clst_2599 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clst_2600 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clst_0366 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clst_1209 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clst_2071 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clst_1467 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Clst_1374 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Clst_2582 tRNA-Val K14237 tRNA-Val; tRNA Val D Clst_2445 tRNA-Val K14237 tRNA-Val; tRNA Val D Clst_1495 tRNA-Val K14237 tRNA-Val; tRNA Val D Clst_1757 tRNA-Val K14237 tRNA-Val; tRNA Val D Clst_2072 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Clst_1839 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Clst_1838 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Clst_1840 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Clst_1351 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Clst_0632 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clst_1841 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clst_0917 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Clst_1934 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Clst_0776 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Clst_1650 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Clst_0011 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Clst_0250 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Clst_1649 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clst_2203 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clst_1303 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Clst_2042 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Clst_0595 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Clst_0563 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Clst_2312 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Clst_2421 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Clst_1375 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Clst_2291 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Clst_0631 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Clst_1027 phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Clst_1028 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Clst_2015 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Clst_1617 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:csd03060] D Clst_2512 secY; SecY K03076 secY; preprotein translocase subunit SecY D Clst_1924 secE; SecE K03073 secE; preprotein translocase subunit SecE D Clst_1952 secG; SecG K03075 secG; preprotein translocase subunit SecG D Clst_2011 protein-export membrane protein K03072 secD; preprotein translocase subunit SecD D Clst_2010 secF; SecF K03074 secF; preprotein translocase subunit SecF D Clst_1269 yajC; YajC K03210 yajC; preprotein translocase subunit YajC D Clst_2665 yidC; YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Clst_0638 secA; SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Clst_1148 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Clst_2387 small signal recognition particle K01983 ffs; SRP RNA D Clst_1096 ftsY; FtsY K03110 ftsY; fused signal recognition particle receptor D Clst_0633 signal peptidase-1 K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clst_1176 signal peptidase-1 K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clst_1541 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Clst_1283 signal peptidase-1 K13280 SEC11; signal peptidase I [EC:3.4.21.89] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:csd04122] D Clst_0879 nifS; NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clst_1294 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clst_0882 tRNA-5-methylaminomethyl-2-thiouridylate-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Clst_1293 thiI; ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] C 03050 Proteasome C 03018 RNA degradation [PATH:csd03018] D Clst_2054 eno; Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Clst_2113 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Clst_1206 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Clst_2276 rho; Rho K03628 rho; transcription termination factor Rho D Clst_1413 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D Clst_1562 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D Clst_1437 pfk1; Pfk K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clst_1943 dnaK; DnaK K04043 dnaK; molecular chaperone DnaK D Clst_2240 groEL1; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clst_2558 groEL2; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clst_0844 hfq; Hfq K03666 hfq; host factor-I protein B B 09124 Replication and repair C 03030 DNA replication [PATH:csd03030] D Clst_1439 DNA polymerase-3 catalytic subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Clst_0636 DNA polymerase-3 alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Clst_2277 DNA polymerase-3 gamma-tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Clst_1194 DNA polymerase-3 gamma-tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Clst_1991 DNA polymerase-3 gamma subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Clst_0002 DNA polymerase-3 beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Clst_2590 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Clst_1329 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Clst_0119 DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clst_1422 ribonuclease K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Clst_1979 ribonuclease H2 K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Clst_0924 DNA polymerase-1 K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clst_0516 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:csd03410] D Clst_0241 DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Clst_2111 DNA lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Clst_1950 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Clst_2216 HhH-GPD superfamily base excision DNA repair protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Clst_2274 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Clst_0648 exodeoxyribonuclease-3 K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Clst_0499 endonuclease-4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Clst_0924 DNA polymerase-1 K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clst_1348 recJ; RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Clst_0516 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:csd03420] D Clst_2392 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Clst_0839 excinuclease subunit A K03701 uvrA; excinuclease ABC subunit A D Clst_0269 excinuclease subunit A K03701 uvrA; excinuclease ABC subunit A D Clst_1951 excinuclease subunit B K03702 uvrB; excinuclease ABC subunit B D Clst_2315 excinuclease subunit C K03703 uvrC; excinuclease ABC subunit C D Clst_0593 helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clst_2400 pcrA; PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clst_0924 DNA polymerase-1 K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clst_0516 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Clst_1019 DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03430 Mismatch repair [PATH:csd03430] D Clst_0841 mutS2; MutS K03555 mutS; DNA mismatch repair protein MutS D Clst_0757 mutS1; MutS K07456 mutS2; DNA mismatch repair protein MutS2 D Clst_0842 mutL; MutL K03572 mutL; DNA mismatch repair protein MutL D Clst_0593 helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clst_2400 pcrA; PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clst_2155 exodeoxyribonuclease-7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Clst_2154 exodeoxyribonuclease-7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Clst_1348 recJ; RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Clst_0119 DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clst_1439 DNA polymerase-3 catalytic subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Clst_0636 DNA polymerase-3 alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Clst_0002 DNA polymerase-3 beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Clst_2277 DNA polymerase-3 gamma-tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Clst_1991 DNA polymerase-3 gamma subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Clst_1194 DNA polymerase-3 gamma-tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Clst_0516 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Clst_0417 DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Clst_0658 dam; Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:csd03440] D Clst_1348 recJ; RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Clst_0119 DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clst_0003 recF; RecF K03629 recF; DNA replication and repair protein RecF D Clst_1953 recO; RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Clst_0293 recR; RecR K06187 recR; recombination protein RecR D Clst_2138 recA; RecA K03553 recA; recombination protein RecA D Clst_0924 DNA polymerase-1 K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clst_1425 ruvA; RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Clst_1424 ruvB; RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Clst_1426 ruvC; RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Clst_0746 recG; RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Clst_2478 recD; RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Clst_1439 DNA polymerase-3 catalytic subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Clst_0636 DNA polymerase-3 alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Clst_0002 DNA polymerase-3 beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Clst_2277 DNA polymerase-3 gamma-tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Clst_1991 DNA polymerase-3 gamma subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Clst_1194 DNA polymerase-3 gamma-tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Clst_1305 priA; PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:csd03450] D Clst_1551 Ku protein K10979 ku; DNA end-binding protein Ku D Clst_1550 ligD2; LigD K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D Clst_1549 ligD1; LigD K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:csd02010] D Clst_1900 ABC transporter periplasmic subunit K15553 ssuA; sulfonate transport system substrate-binding protein D Clst_1901 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D Clst_1902 ABC transporter ATPase subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clst_2638 ABC transporter periplasmic subunit K02012 afuA; iron(III) transport system substrate-binding protein D Clst_2636 ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein D Clst_2637 ABC transporter ATPase subunit K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Clst_1188 ABC transporter periplasmic subunit K11069 potD; spermidine/putrescine transport system substrate-binding protein D Clst_1187 ABC transporter permease subunit-2 K11070 potC; spermidine/putrescine transport system permease protein D Clst_1186 ABC transporter permease subunit-1 K11071 potB; spermidine/putrescine transport system permease protein D Clst_1185 ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Clst_2579 ABC transporter ATPase subunit K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Clst_0934 ABC transporter permease subunit K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D Clst_0935 ABC transporter periplasmic subunit-1 K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Clst_0936 ABC transporter periplasmic subunit-2 K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Clst_1635 ABC transporter periplasmic subunit K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Clst_2247 ABC transporter periplasmic subunit K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Clst_2544 ABC transporter permease subunit K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Clst_0446 ABC transporter periplasmic subunit K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Clst_1636 ABC transporter permease subunit K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Clst_2246 ABC transporter permease subunit K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Clst_1637 ABC transporter periplasmic subunit-2 K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Clst_2245 ABC transporter permease subunit K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Clst_0444 ABC transporter periplasmic subunit-2 K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Clst_0061 ABC transporter permease subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0112 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0434 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0805 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0582 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_1565 hypothetical protein K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0194 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0202 ABC transporter permease subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0217 ABC transporter permease subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0218 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0476 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0797 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0995 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_2117 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_2539 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0850 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0627 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_2597 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_2619 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0230 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0971 ABC transporter permease subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0228 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_0059 ABC transporter periplasmic subunit-1 K17319 lplB; putative aldouronate transport system permease protein D Clst_0109 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_0200 ABC transporter periplasmic subunit-1 K17319 lplB; putative aldouronate transport system permease protein D Clst_0432 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_0807 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_1567 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_0195 ABC transporter periplasmic subunit-1 K17319 lplB; putative aldouronate transport system permease protein D Clst_0215 ABC transporter periplasmic subunit-1 K17319 lplB; putative aldouronate transport system permease protein D Clst_0472 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_0799 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_0969 ABC transporter periplasmic subunit-1 K17319 lplB; putative aldouronate transport system permease protein D Clst_0993 ABC transporter periplasmic subunit-1 K17319 lplB; putative aldouronate transport system permease protein D Clst_1007 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_2119 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_2541 ABC transporter periplasmic subunit-1 K17319 lplB; putative aldouronate transport system permease protein D Clst_2596 ABC transporter periplasmic subunit-1 K17319 lplB; putative aldouronate transport system permease protein D Clst_0849 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_0628 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_2621 ABC transporter periplasmic subunit-1 K17319 lplB; putative aldouronate transport system permease protein D Clst_0229 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_0060 ABC transporter periplasmic subunit-2 K17320 lplC; putative aldouronate transport system permease protein D Clst_0110 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_0806 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_1566 ABC transporter periplasmic subunit-2 K17320 lplC; putative aldouronate transport system permease protein D Clst_0970 ABC transporter periplasmic subunit-2 K17320 lplC; putative aldouronate transport system permease protein D Clst_0848 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_0196 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_0201 ABC transporter periplasmic subunit-2 K17320 lplC; putative aldouronate transport system permease protein D Clst_0216 ABC transporter periplasmic subunit-2 K17320 lplC; putative aldouronate transport system permease protein D Clst_0433 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_0473 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_0798 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_0994 ABC transporter periplasmic subunit-2 K17320 lplC; putative aldouronate transport system permease protein D Clst_2540 ABC transporter periplasmic subunit-2 K17320 lplC; putative aldouronate transport system permease protein D Clst_2595 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_2620 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_0629 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_1008 ABC transporter periplasmic subunit-2 K17320 lplC; putative aldouronate transport system permease protein D Clst_2458 ABC transporter permease subunit K10546 chvE; putative multiple sugar transport system substrate-binding protein D Clst_2460 ABC transporter periplasmic subunit K10547 gguB; putative multiple sugar transport system permease protein D Clst_2459 ABC transporter ATPase subunit K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Clst_1536 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins D Clst_1538 ABC transporter periplasmic subunit K23535 nupB; general nucleoside transport system permease protein D Clst_1539 ABC transporter periplasmic subunit K23536 nupC; general nucleoside transport system permease protein D Clst_1537 ABC transporter ATPase subunit K23537 nupA; general nucleoside transport system ATP-binding protein D Clst_2456 ABC transporter ATPase subunit K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Clst_0456 ABC transporter ATPase subunit K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Clst_0460 ABC transporter permease subunit K10559 rhaS; rhamnose transport system substrate-binding protein D Clst_0458 ABC transporter permease subunit K10560 rhaP; rhamnose transport system permease protein D Clst_0459 ABC transporter periplasmic subunit K10561 rhaQ; rhamnose transport system permease protein D Clst_0457 ABC transporter ATPase subunit K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D Clst_2121 ABC transporter permease subunit K02040 pstS; phosphate transport system substrate-binding protein D Clst_2122 ABC transporter periplasmic subunit K02037 pstC; phosphate transport system permease protein D Clst_2123 ABC transporter periplasmic subunit K02038 pstA; phosphate transport system permease protein D Clst_2124 ABC transporter ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Clst_1796 ABC transporter periplasmic subunit K16958 tcyL; L-cystine transport system permease protein D Clst_1797 ABC transporter periplasmic subunit K16959 tcyM; L-cystine transport system permease protein D Clst_1798 ABC transporter ATPase subunit K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D Clst_1632 ABC transporter permease subunit K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D Clst_1631 ABC transporter periplasmic subunit K17077 artQ; arginine/lysine/histidine transport system permease protein D Clst_1630 ABC transporter ATPase subunit K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D Clst_0962 ABC transporter periplasmic subunit K01999 livK; branched-chain amino acid transport system substrate-binding protein D Clst_0961 ABC transporter periplasmic subunit K01997 livH; branched-chain amino acid transport system permease protein D Clst_0960 ABC transporter periplasmic subunit K01998 livM; branched-chain amino acid transport system permease protein D Clst_0959 ABC transporter ATPase subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein D Clst_0958 ABC transporter ATPase subunit K01996 livF; branched-chain amino acid transport system ATP-binding protein D Clst_0044 ABC transporter periplasmic subunit K02073 metQ; D-methionine transport system substrate-binding protein D Clst_0043 ABC transporter permease subunit K02072 metI; D-methionine transport system permease protein D Clst_0042 ABC transporter ATPase subunit K02071 metN; D-methionine transport system ATP-binding protein D Clst_0050 ABC transporter periplasmic subunit K15580 oppA; oligopeptide transport system substrate-binding protein D Clst_2409 ABC transporter periplasmic subunit K15580 oppA; oligopeptide transport system substrate-binding protein D Clst_0051 ABC transporter permease subunit K15581 oppB; oligopeptide transport system permease protein D Clst_2413 ABC transporter permease subunit K15581 oppB; oligopeptide transport system permease protein D Clst_0052 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein D Clst_2412 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein D Clst_0053 ABC transporter ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Clst_2411 ABC transporter ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Clst_0054 ABC transporter ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Clst_2410 ABC transporter ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Clst_2494 ABC transporter periplasmic subunit K09815 znuA; zinc transport system substrate-binding protein D Clst_2492 ABC transporter permease subunit K09816 znuB; zinc transport system permease protein D Clst_2493 ABC transporter ATPase subunit K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Clst_0347 hypothetical protein K03523 bioY; biotin transport system substrate-specific component D Clst_2195 ABC transporter permease subunit K16785 ecfT; energy-coupling factor transport system permease protein D Clst_2500 ABC transporter permease subunit K16785 ecfT; energy-coupling factor transport system permease protein D Clst_0874 ABC transporter K19310 bcrB; bacitracin transport system permease protein D Clst_0873 ABC transporter ATPase subunit K19309 bcrA; bacitracin transport system ATP-binding protein D Clst_1134 ABC transporter K20460 nukE; lantibiotic transport system permease protein D Clst_1135 hypothetical protein K20461 nukG; lantibiotic transport system permease protein D Clst_0087 ABC transporter permease subunit K20491 nisE; lantibiotic transport system permease protein D Clst_0088 ABC transporter permease subunit K20492 nisG; lantibiotic transport system permease protein D Clst_0342 ftsX1; FtsX K09811 ftsX; cell division transport system permease protein D Clst_2221 ftsX2; FtsX K09811 ftsX; cell division transport system permease protein D Clst_0341 ftsE; FtsE K09812 ftsE; cell division transport system ATP-binding protein D Clst_2220 ATPase K09812 ftsE; cell division transport system ATP-binding protein D Clst_2000 ABC transporter ATPase/permease subunit K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clst_0290 ABC transporter ATPase/permease subunit K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clst_1999 ABC transporter ATPase/permease subunit K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clst_0289 ABC transporter ATPase/permease subunit K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clst_0869 ABC transporter ATPase/permease subunit K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clst_1140 ABC transporter ATPase/permease subunit K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clst_1678 ABC transporter ATPase/permease subunit K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clst_0870 ABC transporter ATPase/permease subunit K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clst_1141 ABC transporter ATPase/permease subunit K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clst_1679 ABC transporter ATPase/permease subunit K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump C 02060 Phosphotransferase system (PTS) [PATH:csd02060] D Clst_2316 phosphotransferase K02784 ptsH; phosphocarrier protein HPr D Clst_2057 phosphotransferase K02784 ptsH; phosphocarrier protein HPr D Clst_1160 fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:csd03070] D Clst_2011 protein-export membrane protein K03072 secD; preprotein translocase subunit SecD D Clst_2010 secF; SecF K03074 secF; preprotein translocase subunit SecF D Clst_1924 secE; SecE K03073 secE; preprotein translocase subunit SecE D Clst_1952 secG; SecG K03075 secG; preprotein translocase subunit SecG D Clst_2512 secY; SecY K03076 secY; preprotein translocase subunit SecY D Clst_1269 yajC; YajC K03210 yajC; preprotein translocase subunit YajC D Clst_2665 yidC; YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Clst_0638 secA; SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Clst_1096 ftsY; FtsY K03110 ftsY; fused signal recognition particle receptor D Clst_1148 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:csd02020] D Clst_2127 PAS domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Clst_2126 response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Clst_1623 response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Clst_1886 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Clst_2121 ABC transporter permease subunit K02040 pstS; phosphate transport system substrate-binding protein D Clst_1125 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D Clst_2468 flagellin K02406 fliC; flagellin D Clst_0690 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D Clst_2173 flagellar motor component K02556 motA; chemotaxis protein MotA D Clst_0871 response regulator K07775 resD; two-component system, OmpR family, response regulator ResD D Clst_2648 histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D Clst_2649 response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR D Clst_0001 dnaA; DnaA K02313 dnaA; chromosomal replication initiator protein D Clst_1032 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clst_1031 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clst_1129 hypothetical protein K18346 vanW; vancomycin resistance protein VanW D Clst_1391 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D Clst_1392 response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR D Clst_0090 histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D Clst_0089 response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR D Clst_0087 ABC transporter permease subunit K20491 nisE; lantibiotic transport system permease protein D Clst_0088 ABC transporter permease subunit K20492 nisG; lantibiotic transport system permease protein D Clst_2017 sporulation transcription factor K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Clst_1048 sporulation transcription factor K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Clst_2613 mae; Mle K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Clst_0495 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D Clst_0496 transcriptional regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA D Clst_2469 csrA; CsrA K03563 csrA; carbon storage regulator D Clst_1498 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Clst_1497 transcriptional regulator K07692 degU; two-component system, NarL family, response regulator DegU D Clst_1315 cpaF1; CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Clst_1325 cpaF2; CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Clst_1390 tadB2; TadB K12510 tadB; tight adherence protein B D Clst_1389 tadB1; TadB K12511 tadC; tight adherence protein C D Clst_1712 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_1717 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_1837 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_2192 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_1221 methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D Clst_1704 MCP methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clst_1720 methylase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clst_1456 methylase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clst_0251 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clst_0573 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clst_1570 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clst_1628 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clst_1648 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clst_1689 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clst_1754 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clst_1776 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clst_1695 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clst_1814 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clst_2319 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clst_2380 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clst_0686 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Clst_1777 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Clst_2108 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Clst_1697 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Clst_1706 cheW; CheW K03408 cheW; purine-binding chemotaxis protein CheW D Clst_1723 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Clst_0685 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clst_1707 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clst_1722 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clst_0551 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clst_1724 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clst_1939 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clst_0199 chemotaxis response regulator K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clst_1703 chemotaxis response regulator K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clst_1719 chemotaxis response regulator K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clst_0208 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_0057 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_0428 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_0470 cell autolysis regulator K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_0808 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_0625 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_1634 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_2143 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_2249 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_1568 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_2543 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_0204 DNA-binding domain-containing protein K07720 yesN; two-component system, response regulator YesN D Clst_0207 response regulator K07720 yesN; two-component system, response regulator YesN D Clst_0058 transcriptional regulator K07720 yesN; two-component system, response regulator YesN D Clst_0157 transcriptional regulator K07720 yesN; two-component system, response regulator YesN D Clst_0429 response regulator K07720 yesN; two-component system, response regulator YesN D Clst_0471 response regulator K07720 yesN; two-component system, response regulator YesN D Clst_0809 transcriptional regulator K07720 yesN; two-component system, response regulator YesN D Clst_0624 response regulator K07720 yesN; two-component system, response regulator YesN D Clst_0626 transcriptional regulator K07720 yesN; two-component system, response regulator YesN D Clst_2142 response regulator K07720 yesN; two-component system, response regulator YesN D Clst_2248 transcriptional regulator K07720 yesN; two-component system, response regulator YesN D Clst_1569 response regulator K07720 yesN; two-component system, response regulator YesN D Clst_2542 transcriptional regulator K07720 yesN; two-component system, response regulator YesN D Clst_0214 transcriptional regulator K07720 yesN; two-component system, response regulator YesN D Clst_1633 response regulator K07720 yesN; two-component system, response regulator YesN D Clst_2120 response regulator K07720 yesN; two-component system, response regulator YesN D Clst_0972 response regulator K07720 yesN; two-component system, response regulator YesN D Clst_2449 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Clst_2537 pectin methylesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D Clst_1823 celZ; CelZ K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D Clst_2475 anti-sigma-28 regulator K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:csd02024] D Clst_0844 hfq; Hfq K03666 hfq; host factor-I protein D Clst_1932 anthranilate synthase subunit 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Clst_1931 glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Clst_0962 ABC transporter periplasmic subunit K01999 livK; branched-chain amino acid transport system substrate-binding protein D Clst_0961 ABC transporter periplasmic subunit K01997 livH; branched-chain amino acid transport system permease protein D Clst_0960 ABC transporter periplasmic subunit K01998 livM; branched-chain amino acid transport system permease protein D Clst_0959 ABC transporter ATPase subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein D Clst_0958 ABC transporter ATPase subunit K01996 livF; branched-chain amino acid transport system ATP-binding protein D Clst_0597 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clst_1023 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clst_1616 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clst_1086 xylanase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D Clst_1554 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Clst_0495 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D Clst_0496 transcriptional regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA D Clst_0050 ABC transporter periplasmic subunit K15580 oppA; oligopeptide transport system substrate-binding protein D Clst_2409 ABC transporter periplasmic subunit K15580 oppA; oligopeptide transport system substrate-binding protein D Clst_0051 ABC transporter permease subunit K15581 oppB; oligopeptide transport system permease protein D Clst_2413 ABC transporter permease subunit K15581 oppB; oligopeptide transport system permease protein D Clst_0052 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein D Clst_2412 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein D Clst_0053 ABC transporter ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Clst_2411 ABC transporter ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Clst_0054 ABC transporter ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Clst_2410 ABC transporter ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Clst_0718 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Clst_0859 ABC transporter periplasmic subunit K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Clst_1995 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Clst_0720 ABC transporter permease subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein D Clst_0860 ABC transporter permease subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein D Clst_0721 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Clst_0861 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Clst_0722 ABC transporter ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Clst_0862 ABC transporter ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Clst_2665 yidC; YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Clst_1924 secE; SecE K03073 secE; preprotein translocase subunit SecE D Clst_1952 secG; SecG K03075 secG; preprotein translocase subunit SecG D Clst_2512 secY; SecY K03076 secY; preprotein translocase subunit SecY D Clst_1269 yajC; YajC K03210 yajC; preprotein translocase subunit YajC D Clst_0638 secA; SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Clst_1096 ftsY; FtsY K03110 ftsY; fused signal recognition particle receptor D Clst_1148 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Clst_1497 transcriptional regulator K07692 degU; two-component system, NarL family, response regulator DegU D Clst_2017 sporulation transcription factor K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Clst_1048 sporulation transcription factor K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Clst_0090 histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D Clst_0089 response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR D Clst_0087 ABC transporter permease subunit K20491 nisE; lantibiotic transport system permease protein D Clst_0088 ABC transporter permease subunit K20492 nisG; lantibiotic transport system permease protein C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:csd02030] D Clst_0251 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clst_0573 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clst_1570 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clst_1628 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clst_1648 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clst_1689 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clst_1754 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clst_1776 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clst_1695 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clst_1814 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clst_2319 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clst_2380 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clst_0685 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clst_1707 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clst_1722 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clst_0686 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Clst_1777 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Clst_2108 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Clst_1697 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Clst_1706 cheW; CheW K03408 cheW; purine-binding chemotaxis protein CheW D Clst_1723 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Clst_0551 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clst_1724 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clst_1939 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clst_0687 cheC; CheC K03410 cheC; chemotaxis protein CheC D Clst_1915 MCP methylation inhibitor K03409 cheX; chemotaxis protein CheX D Clst_2034 MCP methylation inhibitor K03409 cheX; chemotaxis protein CheX D Clst_0199 chemotaxis response regulator K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clst_1703 chemotaxis response regulator K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clst_1719 chemotaxis response regulator K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clst_0688 chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Clst_1704 MCP methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clst_1720 methylase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clst_1456 methylase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clst_0538 fliG; FliG K02410 fliG; flagellar motor switch protein FliG D Clst_0549 fliM; FliM K02416 fliM; flagellar motor switch protein FliM D Clst_0550 fliN; FliN K02417 fliN; flagellar motor switch protein FliN D Clst_2173 flagellar motor component K02556 motA; chemotaxis protein MotA D Clst_2172 flagellar motor protein K02557 motB; chemotaxis protein MotB D Clst_2569 outer membrane protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:csd02040] D Clst_0535 fliE; FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Clst_0537 flagellar biosynthesis lipoprotein K02409 fliF; flagellar M-ring protein FliF D Clst_0538 fliG; FliG K02410 fliG; flagellar motor switch protein FliG D Clst_0539 flagellar biosynthesis protein K02411 fliH; flagellar assembly protein FliH D Clst_0540 fliI; FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Clst_0541 fliJ; FliJ K02413 fliJ; flagellar protein FliJ D Clst_0543 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Clst_0549 fliM; FliM K02416 fliM; flagellar motor switch protein FliM D Clst_0550 fliN; FliN K02417 fliN; flagellar motor switch protein FliN D Clst_0552 flagellar biogenesis protein K02418 fliO; flagellar protein FliO/FliZ D Clst_0553 fliP; FliP K02419 fliP; flagellar biosynthesis protein FliP D Clst_0554 fliQ; FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Clst_0555 fliR; FliR K02421 fliR; flagellar biosynthesis protein FliR D Clst_0681 flhA; FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Clst_0556 flhB; FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Clst_0533 flgB; FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Clst_0534 flgC; FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Clst_0544 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Clst_0546 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D Clst_0082 flgF; FlgF K02391 flgF; flagellar basal-body rod protein FlgF D Clst_0083 flgG; FlgG K02392 flgG; flagellar basal-body rod protein FlgG D Clst_0084 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ D Clst_2472 flgK1; FlgK K02396 flgK; flagellar hook-associated protein 1 D Clst_2473 flgK2; FlgK K02396 flgK; flagellar hook-associated protein 1 D Clst_2471 flagellar hook protein-3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Clst_2468 flagellin K02406 fliC; flagellin D Clst_2466 flagellar capping protein K02407 fliD; flagellar hook-associated protein 2 D Clst_2465 fliS; FliS K02422 fliS; flagellar secretion chaperone FliS D Clst_2173 flagellar motor component K02556 motA; chemotaxis protein MotA D Clst_2172 flagellar motor protein K02557 motB; chemotaxis protein MotB D Clst_2569 outer membrane protein K02557 motB; chemotaxis protein MotB D Clst_2475 anti-sigma-28 regulator K02398 flgM; negative regulator of flagellin synthesis FlgM D Clst_1328 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D Clst_0690 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Clst_2054 eno; Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D Clst_2585 homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:csd01501] D Clst_1301 beta-glucosidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Clst_0050 ABC transporter periplasmic subunit K15580 oppA; oligopeptide transport system substrate-binding protein D Clst_2409 ABC transporter periplasmic subunit K15580 oppA; oligopeptide transport system substrate-binding protein D Clst_0051 ABC transporter permease subunit K15581 oppB; oligopeptide transport system permease protein D Clst_2413 ABC transporter permease subunit K15581 oppB; oligopeptide transport system permease protein D Clst_0052 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein D Clst_2412 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein D Clst_0053 ABC transporter ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Clst_2411 ABC transporter ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Clst_0054 ABC transporter ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Clst_2410 ABC transporter ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Clst_0197 antirepressor membrane subunit K02172 blaR1; bla regulator protein blaR1 D Clst_0198 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Clst_0497 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D Clst_2016 murein polymerase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Clst_0316 ftsI1; FtsI K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Clst_1045 ftsI2; FtsI K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:csd01502] D Clst_1548 Ala-Ala ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clst_2424 Ala-Ala ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clst_2406 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Clst_2085 UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Clst_2084 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Clst_0774 UDP-N-acetylglucosamine-N-acetylmuramyl-pentapeptide pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Clst_1032 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clst_1031 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clst_1129 hypothetical protein K18346 vanW; vancomycin resistance protein VanW C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:csd01503] D Clst_0756 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clst_0515 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clst_1298 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clst_2431 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clst_1125 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:csd01000] C 01001 Protein kinases [BR:csd01001] D Clst_1972 PASTA domain-containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Clst_1319 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Clst_0605 anti-sigma regulator K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D Clst_2307 anti-sigma regulator K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Clst_2309 anti-sigma regulator K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Clst_2127 PAS domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Clst_2648 histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D Clst_1391 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D Clst_0090 histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D Clst_1498 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Clst_0495 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D Clst_0685 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clst_1707 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clst_1722 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clst_0208 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_0057 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_0428 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_0470 cell autolysis regulator K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_0808 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_0625 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_1634 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_2143 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_2249 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_1568 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_2543 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:csd01009] D Clst_2103 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Clst_1437 pfk1; Pfk K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clst_1377 heat shock protein K04079 HSP90A; molecular chaperone HtpG D Clst_1973 serine-threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:csd01002] D Clst_1541 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Clst_1289 prepilin peptidase-1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Clst_0514 GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78] D Clst_1503 peptidase K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-] D Clst_1396 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Clst_0803 cell wall hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Clst_0791 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Clst_2262 glutamine phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Clst_1746 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Clst_1709 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Clst_0780 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D Clst_1279 transpeptidase K07284 srtA; sortase A [EC:3.4.22.70] D Clst_0802 CAAX protease K07052 K07052; CAAX protease family protein D Clst_1505 membrane protease K07052 K07052; CAAX protease family protein D Clst_1455 LysM domain-containing protein K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11] D Clst_1032 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clst_1031 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clst_1976 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Clst_0334 peptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D Clst_2571 peptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D Clst_2510 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Clst_0503 aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Clst_1832 26S proteasome regulatory subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clst_2587 ftsH; FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clst_2371 protease K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-] D Clst_1379 rseP; RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Clst_0197 antirepressor membrane subunit K02172 blaR1; bla regulator protein blaR1 D Clst_2215 membrane protein K24131 prsW; protease PrsW [EC:3.4.-.-] D Clst_1125 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D Clst_0448 serine protease K13274 wprA; cell wall-associated protease [EC:3.4.21.-] D Clst_1546 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clst_2067 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clst_1258 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clst_2268 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clst_2385 clpP2; ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Clst_2550 protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Clst_1525 lexA; LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Clst_0633 signal peptidase-1 K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clst_1176 signal peptidase-1 K03100 lepB; signal peptidase I [EC:3.4.21.89] D Clst_1283 signal peptidase-1 K13280 SEC11; signal peptidase I [EC:3.4.21.89] D Clst_0344 peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Clst_1158 peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Clst_2223 peptidase K05995 pepE; dipeptidase E [EC:3.4.13.21] D Clst_1949 sporulation protein 4B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116] D Clst_1830 hypothetical protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D Clst_1443 collagenase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Clst_2573 collagenase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Clst_0046 protease K03592 pmbA; PmbA protein D Clst_1476 protease K03592 pmbA; PmbA protein D Clst_0045 protease K03568 tldD; TldD protein D Clst_1475 protease K03568 tldD; TldD protein D Clst_0482 hypothetical protein K06894 yfhM; alpha-2-macroglobulin C 01003 Glycosyltransferases [BR:csd01003] D Clst_0740 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Clst_1669 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Clst_0589 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D Clst_2112 glycosyltransferase K00703 glgA; starch synthase [EC:2.4.1.21] D Clst_2016 murein polymerase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Clst_0064 glycosyltransferase K20999 pslF; polysaccharide biosynthesis protein PslF D Clst_2401 N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Clst_2450 UDP-N-acetylmuramyl pentapeptide phosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01005 Lipopolysaccharide biosynthesis proteins [BR:csd01005] D Clst_1372 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D Clst_0124 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D Clst_2450 UDP-N-acetylmuramyl pentapeptide phosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:csd01011] D Clst_0354 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clst_2081 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clst_2644 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Clst_1365 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Clst_2397 UDP-N-acetylmuramate-L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Clst_1450 UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Clst_2086 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Clst_1548 Ala-Ala ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clst_2424 Ala-Ala ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Clst_2406 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Clst_2423 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Clst_1830 hypothetical protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D Clst_2084 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Clst_0774 UDP-N-acetylglucosamine-N-acetylmuramyl-pentapeptide pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Clst_2299 uppP; UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Clst_2144 mviN; MviN K03980 murJ; putative peptidoglycan lipid II flippase D Clst_2016 murein polymerase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Clst_0316 ftsI1; FtsI K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Clst_1045 ftsI2; FtsI K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Clst_2087 ftsI3; FtsI K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein) D Clst_1546 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clst_2067 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clst_1258 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clst_2268 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Clst_1032 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clst_1031 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clst_0803 cell wall hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D Clst_1279 transpeptidase K07284 srtA; sortase A [EC:3.4.22.70] D Clst_0926 murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Clst_1666 murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Clst_1445 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Clst_2430 spore cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Clst_1124 LysM domain-containing protein K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Clst_0078 sporulation protein 2D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D Clst_1542 LytB domain-containing protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D Clst_0756 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clst_0515 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clst_1298 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clst_2431 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:csd01004] D Clst_1108 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Clst_1107 3-oxoacyl-acyl-carrier-protein synthase-3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Clst_1111 3-oxoacyl-acyl-carrier-protein synthase-2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Clst_1109 3-oxoacyl-acyl-carrier-protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clst_0040 alcohol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Clst_2279 3-hydroxyacyl-acyl-carrier-protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Clst_0895 enoyl-acyl-carrier-protein NADH reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Clst_1490 lysophospholipase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D Clst_0597 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clst_1023 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clst_1616 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clst_1625 phosphate-acyl-acyl carrier protein acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Clst_1106 phosphate-acyl-acyl carrier protein acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Clst_1916 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Clst_1458 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:csd01008] D Clst_1610 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:csd01006] D Clst_2153 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Clst_1382 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Clst_0843 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Clst_0234 1-4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:csd01007] D Clst_2072 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Clst_2015 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Clst_1617 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Clst_0250 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Clst_2421 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Clst_1649 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clst_2203 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clst_0563 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Clst_2042 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Clst_0595 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Clst_2312 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Clst_0632 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clst_1841 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clst_0917 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Clst_0631 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Clst_1934 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Clst_0011 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Clst_1375 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Clst_2291 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Clst_0776 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Clst_1650 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Clst_1351 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Clst_1027 phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Clst_1028 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Clst_0919 diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Clst_1629 aspartate-tyrosine-aromatic aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Clst_0893 aspartate-tyrosine-aromatic aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-] D Clst_0260 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clst_2376 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Clst_2256 7-keto-8-aminopelargonate synthetase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Clst_0049 beta-cystathionase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Clst_1892 beta-cystathionase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Clst_2355 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Clst_1230 aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Clst_0483 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:csd03000] D Clst_0570 DNA-binding domain-containing protein K13653 K13653; AraC family transcriptional regulator D Clst_0967 transcriptional regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator D Clst_1752 transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D Clst_0455 transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D Clst_0080 sporulation transcriptional regulator K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D D Clst_0227 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Clst_0360 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Clst_0852 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Clst_0443 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Clst_1018 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Clst_2022 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Clst_1076 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Clst_0985 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Clst_0845 transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D Clst_0800 transcriptional regulator K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor D Clst_1560 araR; AraR K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor D Clst_1261 transcriptional regulator K03710 K03710; GntR family transcriptional regulator D Clst_0915 transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D Clst_2491 iron-zinc uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Clst_0487 iron-zinc uptake regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D Clst_0781 transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D Clst_1022 protein kinase K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D Clst_1890 transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D Clst_0175 transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D Clst_0678 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Clst_1680 metal-dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D Clst_1909 metal-dependent repressor K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D Clst_0198 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Clst_2562 airA; BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Clst_1876 transcriptional regulator K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor D Clst_0340 transcriptional regulator K02647 cdaR; carbohydrate diacid regulator D Clst_2207 DNA-binding protein K01926 rex; redox-sensing transcriptional repressor D Clst_1119 DNA binding domain-containing protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D Clst_1331 DNA binding domain-containing protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D Clst_2390 sporulation protein 5T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D Clst_0009 partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clst_2660 partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clst_0779 glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator D Clst_2148 transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism D Clst_1945 hrcA; HrcA K03705 hrcA; heat-inducible transcriptional repressor D Clst_0262 transcriptional repressor K03708 ctsR; transcriptional regulator of stress and heat shock response D Clst_1046 phage shock protein K03973 pspC; phage shock protein C D Clst_1509 phage shock protein K03973 pspC; phage shock protein C D Clst_1499 nrdR; NrdR K07738 nrdR; transcriptional repressor NrdR D Clst_2090 mraZ; MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:csd03021] D Clst_1019 DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D Clst_2503 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Clst_0280 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Clst_0281 DNA-directed RNA polymerase beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Clst_1935 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Clst_1328 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D Clst_0025 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Clst_0922 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Clst_1668 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Clst_2308 RNA polymerase sigma-70 factor K03090 sigB; RNA polymerase sigma-B factor D Clst_0884 RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Clst_1358 RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Clst_1501 RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Clst_1502 RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor D Clst_2577 RNA polymerase sigma factor K27000 sigH; RNA polymerase sigma-H factor D Clst_0690 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D Clst_1037 antitermination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D Clst_2156 antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D Clst_0161 transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG D Clst_1923 nusG; NusG K02601 nusG; transcription termination/antitermination protein NusG D Clst_0605 anti-sigma regulator K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D Clst_2485 rsbU; RsbU K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D Clst_2310 anti-anti-sigma regulator K04749 rsbV; anti-sigma B factor antagonist D Clst_2307 anti-sigma regulator K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Clst_2309 anti-sigma regulator K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Clst_2313 greA; GreA K03624 greA; transcription elongation factor GreA D Clst_2276 rho; Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:csd03019] D Clst_0486 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D Clst_1112 ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D Clst_1562 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D Clst_1413 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D Clst_1206 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Clst_1408 hydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D Clst_2054 eno; Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Clst_2113 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Clst_2276 rho; Rho K03628 rho; transcription termination factor Rho D Clst_1437 pfk1; Pfk K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Clst_1943 dnaK; DnaK K04043 dnaK; molecular chaperone DnaK D Clst_2240 groEL1; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clst_2558 groEL2; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clst_0844 hfq; Hfq K03666 hfq; host factor-I protein D Clst_2469 csrA; CsrA K03563 csrA; carbon storage regulator D Clst_1364 kinase K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:csd03011] D Clst_1324 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Clst_2525 ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D Clst_2504 ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D Clst_2515 ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D Clst_0118 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Clst_2553 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Clst_2518 ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D Clst_0267 ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D Clst_2532 ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D Clst_2505 ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D Clst_2554 ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D Clst_2506 ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Clst_2668 30S ribosomal protein K02954 RP-S14; small subunit ribosomal protein S14 D Clst_2114 ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D Clst_1149 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Clst_2522 ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D Clst_2593 ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D Clst_2527 ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D Clst_0513 ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D Clst_1349 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Clst_1921 ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D Clst_2528 ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D Clst_2531 ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D Clst_2530 ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D Clst_2519 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Clst_2517 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Clst_2591 ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D Clst_1920 ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D Clst_1922 ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Clst_1919 ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D Clst_0266 ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Clst_2521 ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Clst_2513 ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Clst_2524 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Clst_2502 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Clst_2516 ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D Clst_1981 ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D Clst_1057 ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D Clst_0490 ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D Clst_2526 ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D Clst_2529 ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D Clst_2520 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Clst_0492 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Clst_0745 ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D Clst_2523 ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D Clst_2514 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Clst_2187 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Clst_0738 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Clst_1925 ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D Clst_1056 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Clst_2507 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Clst_0062 ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D Clst_0905 ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D Clst_2555 ribosomal protein K07590 RP-L7A; large subunit ribosomal protein L7A D Clst_0788 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clst_2036 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clst_2654 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clst_0785 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clst_2040 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clst_2658 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clst_2037 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clst_0786 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clst_2655 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:csd03009] D Clst_1112 ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D Clst_1956 era; Era K03595 era; GTPase D Clst_0493 cgtA; CgtA K03979 obgE; GTPase [EC:3.6.5.-] D Clst_1037 antitermination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D Clst_2156 antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D Clst_0161 transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG D Clst_1923 nusG; NusG K02601 nusG; transcription termination/antitermination protein NusG D Clst_2199 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Clst_1975 antitermination factor NusB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Clst_2498 16S rRNA methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D Clst_0748 RNA methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Clst_1940 RNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Clst_2661 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Clst_2089 mraW; MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Clst_1117 methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Clst_2150 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D Clst_1784 methylase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D Clst_2331 rRNA methylase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Clst_2642 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Clst_1774 methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Clst_1399 methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Clst_1974 23S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Clst_1873 23S rRNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Clst_0734 pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Clst_1540 pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Clst_2294 pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Clst_2533 ribosomal protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Clst_1270 rimM; RimM K02860 rimM; 16S rRNA processing protein RimM D Clst_1103 ribosomal protein S12P K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Clst_1941 ribosomal protein-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Clst_0486 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D Clst_1984 yqgF; YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Clst_2332 hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D Clst_1971 GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Clst_1917 engA; EngA K03977 engA; GTPase D Clst_1980 ylqF; YlqF K14540 rbgA; ribosome biogenesis GTPase A D Clst_2626 hflX; HflX K03665 hflX; GTPase D Clst_2455 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Clst_1347 alarmone synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Clst_1041 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Clst_1036 hypothetical protein K09748 rimP; ribosome maturation factor RimP D Clst_0594 ribosome-associated protein K09710 ybeB; ribosome-associated protein D Clst_0525 metalloprotein K07042 ybeY; probable rRNA maturation factor D Clst_0494 RNA-binding protein K07574 yhbY; RNA-binding protein D Clst_2284 ribosomal protein S30P K05808 hpf; ribosome hibernation promoting factor D Clst_1024 ychF; YchF K06942 ychF; ribosome-binding ATPase D Clst_0737 metal-binding protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:csd03016] D Clst_1613 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D Clst_1563 tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Clst_2183 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D Clst_2072 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Clst_1375 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Clst_2291 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Clst_0563 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Clst_0595 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Clst_1649 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clst_2203 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Clst_2421 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Clst_2312 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Clst_0632 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clst_1841 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clst_1351 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Clst_0917 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Clst_1934 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Clst_0776 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Clst_1650 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Clst_0011 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Clst_0250 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Clst_2042 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Clst_0631 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Clst_1027 phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Clst_1028 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Clst_2015 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Clst_1617 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Clst_1346 Tyr-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Clst_1350 diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Clst_1465 tRNA-guanine-N7-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Clst_0278 pseudouridylate synthase-1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Clst_1043 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Clst_0879 nifS; NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clst_1294 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clst_2455 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Clst_0843 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Clst_2663 trmE; TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Clst_2662 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Clst_0172 3-2-5-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D Clst_2667 ribonuclease K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Clst_0765 ribonuclease K01978 rnpB; M1 RNA D Clst_1297 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Clst_0881 2-5 RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Clst_0077 cytosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Clst_0125 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Clst_0840 miaB; MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Clst_2056 tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D Clst_1239 tRNA methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Clst_1271 tRNA-guanine-N1-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Clst_0763 methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D Clst_2033 rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Clst_1989 rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family D Clst_0882 tRNA-5-methylaminomethyl-2-thiouridylate-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Clst_2594 ATPase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D Clst_1265 S-adenosylmethionine-tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Clst_1299 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D Clst_1268 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Clst_1293 thiI; ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Clst_2589 ATPase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Clst_2534 yeaZ; YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Clst_2297 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Clst_2535 ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Clst_1451 dinucleotide-utilizing enzyme K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D Clst_1029 nucleotidyltransferase K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D Clst_1206 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Clst_2113 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:csd03012] D Clst_1040 translation initiation factor-2 K02519 infB; translation initiation factor IF-2 D Clst_1055 bacterial translation initiation factor-3 K02520 infC; translation initiation factor IF-3 D Clst_2556 ABC transporter duplicated ATPase subunit K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Clst_1323 translation elongation factor Ts K02357 tsf; elongation factor Ts D Clst_2551 translation elongation factor TU K02358 tuf; elongation factor Tu D Clst_0261 translation elongation factor G K02355 fusA; elongation factor G D Clst_2552 translation elongation factor G K02355 fusA; elongation factor G D Clst_0180 bacterial peptide chain release factor-1 K02835 prfA; peptide chain release factor 1 D Clst_1321 ribosome recycling factor K02838 frr; ribosome recycling factor D Clst_0101 protein-glutamine-N5 methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Clst_2393 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Clst_2508 translation initiation factor-1 K02518 infA; translation initiation factor IF-1 D Clst_0504 translation elongation factor P K02356 efp; elongation factor P D Clst_2068 bacterial peptide chain release factor-2 K02836 prfB; peptide chain release factor 2 D Clst_1508 bacterial peptide chain release factor-3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:csd03110] D Clst_1959 clpB; ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Clst_0265 ATPase K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Clst_2306 ATPase K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Clst_2384 clpX; ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Clst_1377 heat shock protein K04079 HSP90A; molecular chaperone HtpG D Clst_1943 dnaK; DnaK K04043 dnaK; molecular chaperone DnaK D Clst_2240 groEL1; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clst_2558 groEL2; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clst_1942 dnaJ; DnaJ K03686 dnaJ; molecular chaperone DnaJ D Clst_0754 molecular chaperone K03686 dnaJ; molecular chaperone DnaJ D Clst_1960 molecular chaperone K05516 cbpA; curved DNA-binding protein D Clst_2213 disulfide bond chaperone K04083 hslO; molecular chaperone Hsp33 D Clst_1944 grpE; GrpE K03687 GRPE; molecular chaperone GrpE D Clst_0030 heat shock protein K13993 HSP20; HSP20 family protein D Clst_0952 heat shock protein K13993 HSP20; HSP20 family protein D Clst_2448 heat shock protein K13993 HSP20; HSP20 family protein D Clst_2241 groES1; GroES K04078 groES; chaperonin GroES D Clst_2559 groES2; GroES K04078 groES; chaperonin GroES D Clst_1125 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D Clst_1832 26S proteasome regulatory subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clst_2587 ftsH; FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Clst_0448 serine protease K13274 wprA; cell wall-associated protease [EC:3.4.21.-] D Clst_0465 peptidyl-prolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D Clst_2391 peptidyl-prolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D Clst_1151 thioredoxin K03671 TXN; thioredoxin D Clst_2334 glutaredoxin-like protein K03676 grxC; glutaredoxin 3 C 04131 Membrane trafficking [BR:csd04131] D Clst_0824 hypothetical protein K07192 FLOT; flotillin D Clst_0990 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D Clst_1988 gap; Gap K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clst_0422 pgm1; Pgm K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Clst_2229 pyk; Pyk K00873 PK; pyruvate kinase [EC:2.7.1.40] D Clst_1377 heat shock protein K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:csd03051] D Clst_1377 heat shock protein K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:csd03032] D Clst_1422 ribonuclease K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Clst_2462 bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Clst_0001 dnaA; DnaA K02313 dnaA; chromosomal replication initiator protein D Clst_2590 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Clst_0348 DNA replication protein K02315 dnaC; DNA replication protein DnaC D Clst_0377 phage DNA replication protein K02315 dnaC; DNA replication protein DnaC D Clst_1329 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Clst_0119 DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clst_1439 DNA polymerase-3 catalytic subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Clst_0636 DNA polymerase-3 alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Clst_0002 DNA polymerase-3 beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Clst_1991 DNA polymerase-3 gamma subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Clst_1194 DNA polymerase-3 gamma-tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Clst_2277 DNA polymerase-3 gamma-tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Clst_1979 ribonuclease H2 K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Clst_0924 DNA polymerase-1 K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clst_0516 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Clst_0417 DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Clst_0658 dam; Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Clst_2382 topoisomerase A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Clst_2659 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Clst_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Clst_2383 topoisomerase B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Clst_1340 DNA topoisomerase-1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:csd03036] D Clst_1112 ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D Clst_0824 hypothetical protein K07192 FLOT; flotillin D Clst_2462 bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Clst_1960 molecular chaperone K05516 cbpA; curved DNA-binding protein D Clst_0001 dnaA; DnaA K02313 dnaA; chromosomal replication initiator protein D Clst_0844 hfq; Hfq K03666 hfq; host factor-I protein D Clst_1095 smc; Smc K03529 smc; chromosome segregation protein D Clst_0528 scpA; ScpA K05896 scpA; segregation and condensation protein A D Clst_0529 segregation-condensation protein B K06024 scpB; segregation and condensation protein B D Clst_0248 hypothetical protein K13052 divIC; cell division protein DivIC D Clst_0341 ftsE; FtsE K09812 ftsE; cell division transport system ATP-binding protein D Clst_2220 ATPase K09812 ftsE; cell division transport system ATP-binding protein D Clst_1417 ftsK; FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Clst_2088 septum formation initiator K03586 ftsL; cell division protein FtsL D Clst_2080 ftsQ; FtsQ K03589 ftsQ; cell division protein FtsQ D Clst_2083 ftsW; FtsW K03588 ftsW; cell division protein FtsW D Clst_0342 ftsX1; FtsX K09811 ftsX; cell division transport system permease protein D Clst_2221 ftsX2; FtsX K09811 ftsX; cell division transport system permease protein D Clst_2078 ftsZ; FtsZ K03531 ftsZ; cell division protein FtsZ D Clst_2575 zapA; ZapA K09888 zapA; cell division protein ZapA D Clst_0756 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clst_0515 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clst_1298 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clst_2431 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clst_0317 minC; MinC K03610 minC; septum site-determining protein MinC D Clst_0318 minD; MinD K03609 minD; septum site-determining protein MinD D Clst_0319 minE; MinE K03608 minE; cell division topological specificity factor D Clst_1514 cell division initiation protein K04074 divIVA; cell division initiation protein D Clst_1527 cell division initiation protein K04074 divIVA; cell division initiation protein D Clst_1529 hypothetical protein K09772 sepF; cell division inhibitor SepF D Clst_0081 mreB1; MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Clst_0313 mreB2; MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Clst_0314 mreC; MreC K03570 mreC; rod shape-determining protein MreC D Clst_0315 mreD; MreD K03571 mreD; rod shape-determining protein MreD D Clst_2091 rodA; RodA K05837 rodA; rod shape determining protein RodA D Clst_0008 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D Clst_0009 partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clst_2660 partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clst_2662 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Clst_2661 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Clst_1239 tRNA methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Clst_1420 xerD3; XerD K04763 xerD; integrase/recombinase XerD D Clst_1277 xerD2; XerD K04763 xerD; integrase/recombinase XerD D Clst_2146 ysxC; YsxC K03978 engB; GTP-binding protein D Clst_1361 hypothetical protein K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:csd03400] D Clst_2214 O-6-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Clst_1950 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Clst_0241 DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Clst_2111 DNA lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Clst_1019 DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D Clst_0016 mutT; MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Clst_2572 deoxyuridine 5-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Clst_2274 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Clst_2216 HhH-GPD superfamily base excision DNA repair protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Clst_0648 exodeoxyribonuclease-3 K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Clst_0499 endonuclease-4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Clst_1348 recJ; RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Clst_0516 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Clst_0924 DNA polymerase-1 K02335 polA; DNA polymerase I [EC:2.7.7.7] D Clst_0839 excinuclease subunit A K03701 uvrA; excinuclease ABC subunit A D Clst_0269 excinuclease subunit A K03701 uvrA; excinuclease ABC subunit A D Clst_1951 excinuclease subunit B K03702 uvrB; excinuclease ABC subunit B D Clst_2315 excinuclease subunit C K03703 uvrC; excinuclease ABC subunit C D Clst_0593 helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clst_2400 pcrA; PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Clst_0280 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Clst_0281 DNA-directed RNA polymerase beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Clst_2503 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Clst_1935 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Clst_2392 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Clst_0841 mutS2; MutS K03555 mutS; DNA mismatch repair protein MutS D Clst_0757 mutS1; MutS K07456 mutS2; DNA mismatch repair protein MutS2 D Clst_0842 mutL; MutL K03572 mutL; DNA mismatch repair protein MutL D Clst_2155 exodeoxyribonuclease-7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Clst_2154 exodeoxyribonuclease-7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Clst_1439 DNA polymerase-3 catalytic subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Clst_0636 DNA polymerase-3 alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Clst_0002 DNA polymerase-3 beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Clst_1991 DNA polymerase-3 gamma subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Clst_1194 DNA polymerase-3 gamma-tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Clst_2277 DNA polymerase-3 gamma-tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Clst_0119 DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clst_0417 DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Clst_0658 dam; Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Clst_2478 recD; RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Clst_2138 recA; RecA K03553 recA; recombination protein RecA D Clst_1425 ruvA; RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Clst_1424 ruvB; RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Clst_1426 ruvC; RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Clst_1305 priA; PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Clst_2363 DNA repair exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11 D Clst_0255 radA; RadA K04485 radA; DNA repair protein RadA/Sms D Clst_0003 recF; RecF K03629 recF; DNA replication and repair protein RecF D Clst_0746 recG; RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Clst_1953 recO; RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Clst_0293 recR; RecR K06187 recR; recombination protein RecR D Clst_2147 recN; RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Clst_2075 DNA helicase subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D Clst_2250 exonuclease-5 beta subunit K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D Clst_2076 DNA helicase subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D Clst_1592 CRISPR protein K15342 cas1; CRISP-associated protein Cas1 D Clst_1551 Ku protein K10979 ku; DNA end-binding protein Ku D Clst_1550 ligD2; LigD K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D Clst_1549 ligD1; LigD K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D Clst_2382 topoisomerase A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Clst_2659 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Clst_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Clst_2383 topoisomerase B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Clst_1340 DNA topoisomerase-1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Clst_2462 bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Clst_0375 phage recombinase K07455 recT; recombination protein RecT D Clst_0034 nucleotidyltransferase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Clst_1618 nucleotidyltransferase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Clst_1525 lexA; LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Clst_2137 hypothetical protein K03565 recX; regulatory protein D Clst_2624 ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Clst_1042 exopolyphosphatase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:csd03029] D Clst_1040 translation initiation factor-2 K02519 infB; translation initiation factor IF-2 D Clst_1055 bacterial translation initiation factor-3 K02520 infC; translation initiation factor IF-3 D Clst_1323 translation elongation factor Ts K02357 tsf; elongation factor Ts D Clst_2551 translation elongation factor TU K02358 tuf; elongation factor Tu D Clst_0261 translation elongation factor G K02355 fusA; elongation factor G D Clst_2552 translation elongation factor G K02355 fusA; elongation factor G D Clst_1956 era; Era K03595 era; GTPase D Clst_2015 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Clst_0595 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Clst_0632 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clst_1841 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Clst_1934 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Clst_2421 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Clst_1839 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Clst_1838 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Clst_1840 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Clst_0119 DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Clst_1943 dnaK; DnaK K04043 dnaK; molecular chaperone DnaK D Clst_1944 grpE; GrpE K03687 GRPE; molecular chaperone GrpE D Clst_2240 groEL1; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clst_2558 groEL2; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clst_2241 groES1; GroES K04078 groES; chaperonin GroES D Clst_2559 groES2; GroES K04078 groES; chaperonin GroES D Clst_1942 dnaJ; DnaJ K03686 dnaJ; molecular chaperone DnaJ D Clst_0754 molecular chaperone K03686 dnaJ; molecular chaperone DnaJ D Clst_0879 nifS; NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clst_1294 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clst_2665 yidC; YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Clst_1377 heat shock protein K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:csd02000] D Clst_2000 ABC transporter ATPase/permease subunit K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clst_0290 ABC transporter ATPase/permease subunit K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clst_1999 ABC transporter ATPase/permease subunit K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clst_0289 ABC transporter ATPase/permease subunit K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clst_0869 ABC transporter ATPase/permease subunit K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clst_1140 ABC transporter ATPase/permease subunit K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clst_1678 ABC transporter ATPase/permease subunit K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D Clst_0870 ABC transporter ATPase/permease subunit K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clst_1141 ABC transporter ATPase/permease subunit K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clst_1679 ABC transporter ATPase/permease subunit K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D Clst_0702 ABC transporter ATPase/permease subunit K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Clst_1638 ABC transporter ATPase/permease subunit K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Clst_0982 ABC transporter ATPase/permease subunit K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Clst_0983 ABC transporter ATPase/permease subunit K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Clst_1900 ABC transporter periplasmic subunit K15553 ssuA; sulfonate transport system substrate-binding protein D Clst_1901 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D Clst_1902 ABC transporter ATPase subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D Clst_2638 ABC transporter periplasmic subunit K02012 afuA; iron(III) transport system substrate-binding protein D Clst_2636 ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein D Clst_2637 ABC transporter ATPase subunit K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Clst_1188 ABC transporter periplasmic subunit K11069 potD; spermidine/putrescine transport system substrate-binding protein D Clst_1187 ABC transporter permease subunit-2 K11070 potC; spermidine/putrescine transport system permease protein D Clst_1186 ABC transporter permease subunit-1 K11071 potB; spermidine/putrescine transport system permease protein D Clst_1185 ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Clst_1882 ABC transporter periplasmic subunit K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Clst_1236 ABC transporter periplasmic subunit K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Clst_1262 ABC transporter periplasmic subunit K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Clst_0820 ABC transporter periplasmic subunit K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Clst_0819 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Clst_1881 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Clst_1235 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Clst_1263 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Clst_1234 ABC transporter ATPase subunit K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Clst_1264 ABC transporter ATPase subunit K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Clst_1880 ABC transporter ATPase subunit K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Clst_2579 ABC transporter ATPase subunit K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Clst_2161 ABC transporter permease subunit K25086 musE; maltose transport system substrate-binding protein D Clst_2160 ABC transporter permease subunit K25087 musF; maltose transport system permease protein D Clst_2159 ABC transporter periplasmic subunit-2 K25088 musG; maltose transport system permease protein D Clst_0934 ABC transporter permease subunit K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D Clst_0935 ABC transporter periplasmic subunit-1 K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Clst_0936 ABC transporter periplasmic subunit-2 K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Clst_1635 ABC transporter periplasmic subunit K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Clst_2247 ABC transporter periplasmic subunit K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Clst_2544 ABC transporter permease subunit K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Clst_0446 ABC transporter periplasmic subunit K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D Clst_1636 ABC transporter permease subunit K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Clst_2246 ABC transporter permease subunit K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D Clst_1637 ABC transporter periplasmic subunit-2 K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Clst_2245 ABC transporter permease subunit K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Clst_0444 ABC transporter periplasmic subunit-2 K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D Clst_0061 ABC transporter permease subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0112 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0434 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0805 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0582 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_1565 hypothetical protein K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0194 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0202 ABC transporter permease subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0217 ABC transporter permease subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0218 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0476 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0797 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0995 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_2117 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_2539 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0850 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0627 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_2597 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_2619 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0230 ABC transporter periplasmic subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0971 ABC transporter permease subunit K17318 lplA; putative aldouronate transport system substrate-binding protein D Clst_0228 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_0059 ABC transporter periplasmic subunit-1 K17319 lplB; putative aldouronate transport system permease protein D Clst_0109 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_0200 ABC transporter periplasmic subunit-1 K17319 lplB; putative aldouronate transport system permease protein D Clst_0432 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_0807 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_1567 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_0195 ABC transporter periplasmic subunit-1 K17319 lplB; putative aldouronate transport system permease protein D Clst_0215 ABC transporter periplasmic subunit-1 K17319 lplB; putative aldouronate transport system permease protein D Clst_0472 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_0799 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_0969 ABC transporter periplasmic subunit-1 K17319 lplB; putative aldouronate transport system permease protein D Clst_0993 ABC transporter periplasmic subunit-1 K17319 lplB; putative aldouronate transport system permease protein D Clst_1007 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_2119 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_2541 ABC transporter periplasmic subunit-1 K17319 lplB; putative aldouronate transport system permease protein D Clst_2596 ABC transporter periplasmic subunit-1 K17319 lplB; putative aldouronate transport system permease protein D Clst_0849 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_0628 ABC transporter permease subunit K17319 lplB; putative aldouronate transport system permease protein D Clst_2621 ABC transporter periplasmic subunit-1 K17319 lplB; putative aldouronate transport system permease protein D Clst_0229 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_0060 ABC transporter periplasmic subunit-2 K17320 lplC; putative aldouronate transport system permease protein D Clst_0110 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_0806 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_1566 ABC transporter periplasmic subunit-2 K17320 lplC; putative aldouronate transport system permease protein D Clst_0970 ABC transporter periplasmic subunit-2 K17320 lplC; putative aldouronate transport system permease protein D Clst_0848 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_0196 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_0201 ABC transporter periplasmic subunit-2 K17320 lplC; putative aldouronate transport system permease protein D Clst_0216 ABC transporter periplasmic subunit-2 K17320 lplC; putative aldouronate transport system permease protein D Clst_0433 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_0473 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_0798 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_0994 ABC transporter periplasmic subunit-2 K17320 lplC; putative aldouronate transport system permease protein D Clst_2540 ABC transporter periplasmic subunit-2 K17320 lplC; putative aldouronate transport system permease protein D Clst_2595 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_2620 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_0629 ABC transporter permease subunit K17320 lplC; putative aldouronate transport system permease protein D Clst_1008 ABC transporter periplasmic subunit-2 K17320 lplC; putative aldouronate transport system permease protein D Clst_2458 ABC transporter permease subunit K10546 chvE; putative multiple sugar transport system substrate-binding protein D Clst_2460 ABC transporter periplasmic subunit K10547 gguB; putative multiple sugar transport system permease protein D Clst_2459 ABC transporter ATPase subunit K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Clst_0460 ABC transporter permease subunit K10559 rhaS; rhamnose transport system substrate-binding protein D Clst_0458 ABC transporter permease subunit K10560 rhaP; rhamnose transport system permease protein D Clst_0459 ABC transporter periplasmic subunit K10561 rhaQ; rhamnose transport system permease protein D Clst_0457 ABC transporter ATPase subunit K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D Clst_2456 ABC transporter ATPase subunit K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Clst_0456 ABC transporter ATPase subunit K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Clst_0479 ABC transporter periplasmic subunit K25062 abnE; arabinooligosaccharide transport system substrate-binding protein D Clst_0480 ABC transporter permease subunit K25063 abnF; arabinooligosaccharide transport system permease protein D Clst_0481 ABC transporter permease subunit K25064 abnJ; arabinooligosaccharide transport system permease protein D Clst_2141 ABC transporter periplasmic subunit K25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein D Clst_0219 ABC transporter periplasmic subunit K25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein D Clst_2140 ABC transporter permease subunit K25677 yesP; pectin-derived oligosaccharide transport system permease protein D Clst_0220 ABC transporter periplasmic subunit-1 K25677 yesP; pectin-derived oligosaccharide transport system permease protein D Clst_0221 ABC transporter permease subunit K25678 yesQ; pectin-derived oligosaccharide transport system permease protein D Clst_2139 ABC transporter permease subunit K25678 yesQ; pectin-derived oligosaccharide transport system permease protein D Clst_1536 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins D Clst_1538 ABC transporter periplasmic subunit K23535 nupB; general nucleoside transport system permease protein D Clst_1539 ABC transporter periplasmic subunit K23536 nupC; general nucleoside transport system permease protein D Clst_1537 ABC transporter ATPase subunit K23537 nupA; general nucleoside transport system ATP-binding protein D Clst_1075 ABC transporter periplasmic subunit K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Clst_1589 ABC transporter permease subunit K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Clst_0209 ABC transporter periplasmic subunit K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Clst_1085 ABC transporter permease subunit K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Clst_0210 ABC transporter permease subunit K02025 ABC.MS.P; multiple sugar transport system permease protein D Clst_0667 ABC transporter periplasmic subunit-1 K02025 ABC.MS.P; multiple sugar transport system permease protein D Clst_0445 ABC transporter permease subunit K02025 ABC.MS.P; multiple sugar transport system permease protein D Clst_1588 ABC transporter periplasmic subunit-1 K02025 ABC.MS.P; multiple sugar transport system permease protein D Clst_1069 ABC transporter periplasmic subunit-1 K02025 ABC.MS.P; multiple sugar transport system permease protein D Clst_1078 ABC transporter permease subunit K02025 ABC.MS.P; multiple sugar transport system permease protein D Clst_0211 ABC transporter periplasmic subunit-2 K02026 ABC.MS.P1; multiple sugar transport system permease protein D Clst_1587 ABC transporter periplasmic subunit-2 K02026 ABC.MS.P1; multiple sugar transport system permease protein D Clst_1074 ABC transporter permease subunit K02026 ABC.MS.P1; multiple sugar transport system permease protein D Clst_1084 ABC transporter periplasmic subunit-2 K02026 ABC.MS.P1; multiple sugar transport system permease protein D Clst_1079 ABC transporter periplasmic subunit-2 K02026 ABC.MS.P1; multiple sugar transport system permease protein D Clst_2121 ABC transporter permease subunit K02040 pstS; phosphate transport system substrate-binding protein D Clst_2122 ABC transporter periplasmic subunit K02037 pstC; phosphate transport system permease protein D Clst_2123 ABC transporter periplasmic subunit K02038 pstA; phosphate transport system permease protein D Clst_2124 ABC transporter ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Clst_1796 ABC transporter periplasmic subunit K16958 tcyL; L-cystine transport system permease protein D Clst_1797 ABC transporter periplasmic subunit K16959 tcyM; L-cystine transport system permease protein D Clst_1798 ABC transporter ATPase subunit K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D Clst_1632 ABC transporter permease subunit K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D Clst_1631 ABC transporter periplasmic subunit K17077 artQ; arginine/lysine/histidine transport system permease protein D Clst_1630 ABC transporter ATPase subunit K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D Clst_0962 ABC transporter periplasmic subunit K01999 livK; branched-chain amino acid transport system substrate-binding protein D Clst_0961 ABC transporter periplasmic subunit K01997 livH; branched-chain amino acid transport system permease protein D Clst_0960 ABC transporter periplasmic subunit K01998 livM; branched-chain amino acid transport system permease protein D Clst_0959 ABC transporter ATPase subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein D Clst_0958 ABC transporter ATPase subunit K01996 livF; branched-chain amino acid transport system ATP-binding protein D Clst_0044 ABC transporter periplasmic subunit K02073 metQ; D-methionine transport system substrate-binding protein D Clst_0043 ABC transporter permease subunit K02072 metI; D-methionine transport system permease protein D Clst_0042 ABC transporter ATPase subunit K02071 metN; D-methionine transport system ATP-binding protein D Clst_0954 ABC transporter permease subunit K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Clst_0955 ABC transporter periplasmic subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Clst_0956 ABC transporter ATPase subunit K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Clst_0050 ABC transporter periplasmic subunit K15580 oppA; oligopeptide transport system substrate-binding protein D Clst_2409 ABC transporter periplasmic subunit K15580 oppA; oligopeptide transport system substrate-binding protein D Clst_0051 ABC transporter permease subunit K15581 oppB; oligopeptide transport system permease protein D Clst_2413 ABC transporter permease subunit K15581 oppB; oligopeptide transport system permease protein D Clst_0052 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein D Clst_2412 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein D Clst_0053 ABC transporter ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Clst_2411 ABC transporter ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein D Clst_0054 ABC transporter ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Clst_2410 ABC transporter ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein D Clst_0718 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Clst_0859 ABC transporter periplasmic subunit K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Clst_1995 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Clst_0720 ABC transporter permease subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein D Clst_0860 ABC transporter permease subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein D Clst_0721 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Clst_0861 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Clst_0722 ABC transporter ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Clst_0862 ABC transporter ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Clst_1786 ABC transporter periplasmic subunit K25282 yclQ; iron-siderophore transport system substrate-binding protein D Clst_1788 ABC transporter permease subunit K25283 yclO; iron-siderophore transport system permease protein D Clst_1789 ABC transporter permease subunit K25284 yclN; iron-siderophore transport system permease protein D Clst_1787 ABC transporter ATPase subunit K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D Clst_2132 ABC transporter periplasmic subunit K25034 btuF; cobalamin transport system substrate-binding protein D Clst_2131 ABC transporter permease subunit K25027 btuC; cobalamin transport system permease protein D Clst_2130 ABC transporter ATPase subunit K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D Clst_2494 ABC transporter periplasmic subunit K09815 znuA; zinc transport system substrate-binding protein D Clst_2492 ABC transporter permease subunit K09816 znuB; zinc transport system permease protein D Clst_2493 ABC transporter ATPase subunit K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Clst_0347 hypothetical protein K03523 bioY; biotin transport system substrate-specific component D Clst_2197 membrane protein K16924 mtsT; energy-coupling factor transport system substrate-specific component D Clst_2195 ABC transporter permease subunit K16785 ecfT; energy-coupling factor transport system permease protein D Clst_2500 ABC transporter permease subunit K16785 ecfT; energy-coupling factor transport system permease protein D Clst_2501 ABC transporter duplicated ATPase subunit K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Clst_2196 ABC transporter duplicated ATPase subunit K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Clst_1134 ABC transporter K20460 nukE; lantibiotic transport system permease protein D Clst_1135 hypothetical protein K20461 nukG; lantibiotic transport system permease protein D Clst_0087 ABC transporter permease subunit K20491 nisE; lantibiotic transport system permease protein D Clst_0088 ABC transporter permease subunit K20492 nisG; lantibiotic transport system permease protein D Clst_0897 ABC transporter K25151 gldF; gliding motility-associated transport system permease protein D Clst_0896 ABC transporter ATPase subunit K25152 gldA; gliding motility-associated transport system ATP-binding protein D Clst_0898 ABC transporter K25153 gldG; gliding motility-associatede transport system auxiliary component D Clst_0874 ABC transporter K19310 bcrB; bacitracin transport system permease protein D Clst_0873 ABC transporter ATPase subunit K19309 bcrA; bacitracin transport system ATP-binding protein D Clst_0342 ftsX1; FtsX K09811 ftsX; cell division transport system permease protein D Clst_2221 ftsX2; FtsX K09811 ftsX; cell division transport system permease protein D Clst_0341 ftsE; FtsE K09812 ftsE; cell division transport system ATP-binding protein D Clst_2220 ATPase K09812 ftsE; cell division transport system ATP-binding protein D Clst_1654 ABC transporter permease subunit K25154 evrC; viologen exporter family transport system permease protein D Clst_0032 ABC transporter permease subunit K25154 evrC; viologen exporter family transport system permease protein D Clst_1655 ABC transporter permease subunit K25155 evrB; viologen exporter family transport system permease protein D Clst_0031 ABC transporter permease subunit K25155 evrB; viologen exporter family transport system permease protein D Clst_1657 ABC transporter ATPase subunit K25156 evrA; viologen exporter family transport system ATP-binding protein D Clst_0033 ABC transporter ATPase subunit K25156 evrA; viologen exporter family transport system ATP-binding protein D Clst_2206 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Clst_0769 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Clst_2205 ABC transporter ATPase subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clst_2419 ABC transporter ATPase subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clst_0768 ABC transporter ATPase subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clst_1486 ABC transporter ATPase subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Clst_2628 ABC transporter permease subunit K02004 ABC.CD.P; putative ABC transport system permease protein D Clst_2650 ABC transporter permease subunit K02004 ABC.CD.P; putative ABC transport system permease protein D Clst_0836 ABC transporter ATPase subunit K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clst_0560 ABC transporter ATPase subunit K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clst_2622 ABC transporter ATPase subunit K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clst_2629 ABC transporter ATPase subunit K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clst_2653 ABC transporter ATPase subunit K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Clst_1555 efflux protein K26939 norM; MATE family, multidrug efflux pump D Clst_0427 efflux protein K26937 dinF; MATE family, multidrug efflux pump D Clst_1904 efflux protein K26937 dinF; MATE family, multidrug efflux pump D Clst_1216 efflux protein K26937 dinF; MATE family, multidrug efflux pump D Clst_1748 efflux protein K26937 dinF; MATE family, multidrug efflux pump D Clst_1621 efflux protein K26937 dinF; MATE family, multidrug efflux pump D Clst_1454 efflux protein K26937 dinF; MATE family, multidrug efflux pump D Clst_0999 major facilitator superfamily protein K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D Clst_0188 major facilitator superfamily protein K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D Clst_2316 phosphotransferase K02784 ptsH; phosphocarrier protein HPr D Clst_2057 phosphotransferase K02784 ptsH; phosphocarrier protein HPr D Clst_1702 nitrogen regulator K03320 amt; ammonium transporter, Amt family D Clst_0160 lconductance channel protein K03282 mscL; large conductance mechanosensitive channel D Clst_1300 small-conductance channel protein K16052 ynaI; MscS family membrane protein D Clst_1906 mgtE; MgtE K06213 mgtE; magnesium transporter D Clst_2173 flagellar motor component K02556 motA; chemotaxis protein MotA D Clst_2172 flagellar motor protein K02557 motB; chemotaxis protein MotB D Clst_2569 outer membrane protein K02557 motB; chemotaxis protein MotB D Clst_0022 transporter K03284 corA; magnesium transporter D Clst_1572 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D Clst_1580 sodium-melibiose symporter K16211 malY; maltose/moltooligosaccharide transporter D Clst_0587 spore germination protein K06296 gerKB; spore germination protein KB D Clst_2066 spore germination protein K06296 gerKB; spore germination protein KB D Clst_0973 transporter K07238 TC.ZIP; zinc transporter, ZIP family D Clst_2463 transporter K07238 TC.ZIP; zinc transporter, ZIP family D Clst_0980 efflux pump protein K18303 mexK; multidrug efflux pump D Clst_1554 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D Clst_1582 sodium-proline symporter K11928 putP; sodium/proline symporter D Clst_1914 hypothetical protein K03312 gltS; glutamate:Na+ symporter, ESS family D Clst_0232 potassium transporter periplasmic subunit K03498 trkH; trk/ktr system potassium uptake protein D Clst_0233 potassium transporter K03499 trkA; trk/ktr system potassium uptake protein D Clst_0953 xanthine-uracil permease K02824 uraA; uracil permease D Clst_1794 permease K06901 pbuG; adenine/guanine/hypoxanthine permease D Clst_2295 eriC; EriC K03281 clcA; chloride channel protein, CIC family D Clst_1060 sodium-phosphate symporter K03324 yjbB; phosphate:Na+ symporter D Clst_0029 membrane protein K06409 spoVB; stage V sporulation protein B D Clst_2144 mviN; MviN K03980 murJ; putative peptidoglycan lipid II flippase D Clst_0913 permease K24180 mleP; malate permease and related proteins D Clst_0247 permease K24180 mleP; malate permease and related proteins D Clst_0976 branched-chain amino acid permease K26605 azlC; branched chain amino acid efflux pump D Clst_0977 membrane protein K26606 azlD; branched chain amino acid efflux pump D Clst_0272 membrane protein K23675 fmnP; riboflavin transporter D Clst_2135 hypothetical protein K23675 fmnP; riboflavin transporter D Clst_2083 ftsW; FtsW K03588 ftsW; cell division protein FtsW D Clst_0963 pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D Clst_0601 oadB1; OadB K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Clst_1166 oadB2; OadB K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Clst_1052 oadA; OadA K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Clst_1050 acetyl-CoA carboxylase carboxyltransferase alpha/beta subunit K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D Clst_1051 biotin carboxyl carrier protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Clst_0602 oadG; OadG K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D Clst_2210 cytochrome-c biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein D Clst_1681 Fe2+ transporter A K04758 feoA; ferrous iron transport protein A D Clst_1682 Fe2+ transporter A K04758 feoA; ferrous iron transport protein A D Clst_1908 Fe2+ transporter A K04758 feoA; ferrous iron transport protein A D Clst_1683 feoB1; FeoB K04759 feoB; ferrous iron transport protein B D Clst_1801 feoB2; FeoB K04759 feoB; ferrous iron transport protein B D Clst_1907 feoB3; FeoB K04759 feoB; ferrous iron transport protein B D Clst_1600 membrane protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:csd02044] D Clst_1289 prepilin peptidase-1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Clst_1221 methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D Clst_1217 pilB; PilB K02652 pilB; type IV pilus assembly protein PilB D Clst_1220 pulF; PulF K02653 pilC; type IV pilus assembly protein PilC D Clst_1219 pilM; PilM K02662 pilM; type IV pilus assembly protein PilM D Clst_1218 pilT; PilT K02669 pilT; twitching motility protein PilT D Clst_1315 cpaF1; CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Clst_1325 cpaF2; CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Clst_1390 tadB2; TadB K12510 tadB; tight adherence protein B D Clst_1389 tadB1; TadB K12511 tadC; tight adherence protein C D Clst_1528 membrane protein K02221 yggT; YggT family protein D Clst_0775 comEA; ComEA K02237 comEA; competence protein ComEA D Clst_2451 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Clst_1993 comEC; ComEC K02238 comEC; competence protein ComEC D Clst_1213 hydrolase K02238 comEC; competence protein ComEC D Clst_1233 comFB; ComFB K02241 comFB; competence protein ComFB D Clst_0681 flhA; FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Clst_0556 flhB; FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Clst_1977 fhlB; FhlB K04061 flhB2; flagellar biosynthesis protein D Clst_0537 flagellar biosynthesis lipoprotein K02409 fliF; flagellar M-ring protein FliF D Clst_0539 flagellar biosynthesis protein K02411 fliH; flagellar assembly protein FliH D Clst_0540 fliI; FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Clst_0550 fliN; FliN K02417 fliN; flagellar motor switch protein FliN D Clst_0552 flagellar biogenesis protein K02418 fliO; flagellar protein FliO/FliZ D Clst_0553 fliP; FliP K02419 fliP; flagellar biosynthesis protein FliP D Clst_0554 fliQ; FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Clst_0555 fliR; FliR K02421 fliR; flagellar biosynthesis protein FliR D Clst_0638 secA; SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Clst_2011 protein-export membrane protein K03072 secD; preprotein translocase subunit SecD D Clst_1924 secE; SecE K03073 secE; preprotein translocase subunit SecE D Clst_2010 secF; SecF K03074 secF; preprotein translocase subunit SecF D Clst_1952 secG; SecG K03075 secG; preprotein translocase subunit SecG D Clst_2512 secY; SecY K03076 secY; preprotein translocase subunit SecY D Clst_1148 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Clst_1096 ftsY; FtsY K03110 ftsY; fused signal recognition particle receptor D Clst_1269 yajC; YajC K03210 yajC; preprotein translocase subunit YajC D Clst_2665 yidC; YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:csd02042] D Clst_1572 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:csd02022] D Clst_2127 PAS domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Clst_2126 response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Clst_1623 response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Clst_0871 response regulator K07775 resD; two-component system, OmpR family, response regulator ResD D Clst_2648 histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D Clst_2649 response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR D Clst_1391 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D Clst_1392 response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR D Clst_0090 histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3] D Clst_0089 response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR D Clst_1122 response regulator K02483 K02483; two-component system, OmpR family, response regulator D Clst_1498 histidine kinase K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] D Clst_1497 transcriptional regulator K07692 degU; two-component system, NarL family, response regulator DegU D Clst_2017 sporulation transcription factor K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Clst_1048 sporulation transcription factor K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A D Clst_0495 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D Clst_0496 transcriptional regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA D Clst_0685 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clst_1707 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clst_1722 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clst_0551 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clst_1724 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clst_1939 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clst_0199 chemotaxis response regulator K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clst_1703 chemotaxis response regulator K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clst_1719 chemotaxis response regulator K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clst_0208 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_0057 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_0428 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_0470 cell autolysis regulator K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_0808 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_0625 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_1634 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_2143 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_2249 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_1568 histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_2543 signal transduction protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3] D Clst_0204 DNA-binding domain-containing protein K07720 yesN; two-component system, response regulator YesN D Clst_0207 response regulator K07720 yesN; two-component system, response regulator YesN D Clst_0058 transcriptional regulator K07720 yesN; two-component system, response regulator YesN D Clst_0157 transcriptional regulator K07720 yesN; two-component system, response regulator YesN D Clst_0429 response regulator K07720 yesN; two-component system, response regulator YesN D Clst_0471 response regulator K07720 yesN; two-component system, response regulator YesN D Clst_0809 transcriptional regulator K07720 yesN; two-component system, response regulator YesN D Clst_0624 response regulator K07720 yesN; two-component system, response regulator YesN D Clst_0626 transcriptional regulator K07720 yesN; two-component system, response regulator YesN D Clst_2142 response regulator K07720 yesN; two-component system, response regulator YesN D Clst_2248 transcriptional regulator K07720 yesN; two-component system, response regulator YesN D Clst_1569 response regulator K07720 yesN; two-component system, response regulator YesN D Clst_2542 transcriptional regulator K07720 yesN; two-component system, response regulator YesN D Clst_0214 transcriptional regulator K07720 yesN; two-component system, response regulator YesN D Clst_1633 response regulator K07720 yesN; two-component system, response regulator YesN D Clst_2120 response regulator K07720 yesN; two-component system, response regulator YesN D Clst_0972 response regulator K07720 yesN; two-component system, response regulator YesN D Clst_1711 response regulator K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:csd02035] D Clst_0685 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clst_1707 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clst_1722 chemotaxis protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Clst_0686 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Clst_1777 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Clst_2108 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Clst_1697 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Clst_1706 cheW; CheW K03408 cheW; purine-binding chemotaxis protein CheW D Clst_1723 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Clst_1915 MCP methylation inhibitor K03409 cheX; chemotaxis protein CheX D Clst_2034 MCP methylation inhibitor K03409 cheX; chemotaxis protein CheX D Clst_0687 cheC; CheC K03410 cheC; chemotaxis protein CheC D Clst_0688 chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Clst_1704 MCP methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clst_1720 methylase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clst_1456 methylase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Clst_0199 chemotaxis response regulator K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clst_1703 chemotaxis response regulator K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clst_1719 chemotaxis response regulator K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Clst_0551 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clst_1724 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clst_1939 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Clst_0251 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clst_0573 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clst_1570 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clst_1628 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clst_1648 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clst_1689 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clst_1754 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clst_1776 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clst_1695 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clst_1814 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Clst_2319 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clst_2380 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Clst_0539 flagellar biosynthesis protein K02411 fliH; flagellar assembly protein FliH D Clst_0540 fliI; FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Clst_0541 fliJ; FliJ K02413 fliJ; flagellar protein FliJ D Clst_0552 flagellar biogenesis protein K02418 fliO; flagellar protein FliO/FliZ D Clst_0553 fliP; FliP K02419 fliP; flagellar biosynthesis protein FliP D Clst_0554 fliQ; FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Clst_0555 fliR; FliR K02421 fliR; flagellar biosynthesis protein FliR D Clst_0681 flhA; FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Clst_0556 flhB; FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Clst_0538 fliG; FliG K02410 fliG; flagellar motor switch protein FliG D Clst_0549 fliM; FliM K02416 fliM; flagellar motor switch protein FliM D Clst_0550 fliN; FliN K02417 fliN; flagellar motor switch protein FliN D Clst_0537 flagellar biosynthesis lipoprotein K02409 fliF; flagellar M-ring protein FliF D Clst_0535 fliE; FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Clst_0543 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Clst_0533 flgB; FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Clst_0534 flgC; FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Clst_0544 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Clst_0082 flgF; FlgF K02391 flgF; flagellar basal-body rod protein FlgF D Clst_0083 flgG; FlgG K02392 flgG; flagellar basal-body rod protein FlgG D Clst_0084 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ D Clst_0546 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D Clst_2472 flgK1; FlgK K02396 flgK; flagellar hook-associated protein 1 D Clst_2473 flgK2; FlgK K02396 flgK; flagellar hook-associated protein 1 D Clst_2471 flagellar hook protein-3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Clst_2468 flagellin K02406 fliC; flagellin D Clst_2466 flagellar capping protein K02407 fliD; flagellar hook-associated protein 2 D Clst_2465 fliS; FliS K02422 fliS; flagellar secretion chaperone FliS D Clst_0690 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D Clst_2173 flagellar motor component K02556 motA; chemotaxis protein MotA D Clst_2172 flagellar motor protein K02557 motB; chemotaxis protein MotB D Clst_2569 outer membrane protein K02557 motB; chemotaxis protein MotB D Clst_2470 hypothetical protein K13626 fliW; flagellar assembly factor FliW D Clst_2475 anti-sigma-28 regulator K02398 flgM; negative regulator of flagellin synthesis FlgM D Clst_2467 flaG; FlaG K06603 flaG; flagellar protein FlaG D Clst_0547 hypothetical protein K02385 flbD; flagellar protein FlbD D Clst_0682 flhF; FlhF K02404 flhF; flagellar biosynthesis protein FlhF D Clst_0683 ATPase K04562 flhG; flagellar biosynthesis protein FlhG D Clst_1218 pilT; PilT K02669 pilT; twitching motility protein PilT D Clst_1221 methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D Clst_1217 pilB; PilB K02652 pilB; type IV pilus assembly protein PilB D Clst_1220 pulF; PulF K02653 pilC; type IV pilus assembly protein PilC D Clst_1289 prepilin peptidase-1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Clst_1219 pilM; PilM K02662 pilM; type IV pilus assembly protein PilM D Clst_1315 cpaF1; CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D Clst_1325 cpaF2; CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:csd04812] D Clst_0014 hypothetical protein K06990 MEMO1; MEMO1 family protein D Clst_0081 mreB1; MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Clst_0313 mreB2; MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Clst_2078 ftsZ; FtsZ K03531 ftsZ; cell division protein FtsZ D Clst_0317 minC; MinC K03610 minC; septum site-determining protein MinC D Clst_0318 minD; MinD K03609 minD; septum site-determining protein MinD D Clst_0319 minE; MinE K03608 minE; cell division topological specificity factor D Clst_0008 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D Clst_0009 partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Clst_2660 partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:csd04147] D Clst_1377 heat shock protein K04079 HSP90A; molecular chaperone HtpG D Clst_2054 eno; Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Clst_1988 gap; Gap K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Clst_1987 pgk; Pgk K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Clst_2229 pyk; Pyk K00873 PK; pyruvate kinase [EC:2.7.1.40] D Clst_1976 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Clst_0824 hypothetical protein K07192 FLOT; flotillin D Clst_2240 groEL1; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clst_2558 groEL2; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Clst_1943 dnaK; DnaK K04043 dnaK; molecular chaperone DnaK D Clst_1053 gpi; Gpi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Clst_1097 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Clst_2551 translation elongation factor TU K02358 tuf; elongation factor Tu D Clst_1350 diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Clst_2023 ldh; Ldh K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Clst_0597 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clst_1023 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clst_1616 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Clst_2103 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Clst_2511 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Clst_1793 adenine/guanine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Clst_1428 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Clst_1427 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Clst_0092 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D Clst_2189 galK; GalK K00849 galK; galactokinase [EC:2.7.1.6] D Clst_0098 amylase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Clst_1013 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Clst_2612 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Clst_1712 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_1717 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_1837 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_2192 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Clst_1886 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Clst_1102 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Clst_2027 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Clst_0095 aldo/keto reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D Clst_0829 pdhD; PdhD K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Clst_1190 zwf; Zwf K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Clst_1986 tpi; Tpi K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Clst_0422 pgm1; Pgm K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:csd02048] D Clst_1592 CRISPR protein K15342 cas1; CRISP-associated protein Cas1 D Clst_1591 CRISPR protein K09951 cas2; CRISPR-associated protein Cas2 D Clst_1594 CRISPR helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Clst_1822 CRISPR helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Clst_1819 CRISPR protein K19088 cst1; CRISPR-associated protein Cst1 D Clst_1597 CRISPR protein K19088 cst1; CRISPR-associated protein Cst1 D Clst_1820 CRISPR autoregulator K19075 cst2; CRISPR-associated protein Cst2 D Clst_1596 CRISPR autoregulator K19075 cst2; CRISPR-associated protein Cst2 D Clst_1593 CRISPR protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Clst_1821 CRISPR protein K19090 cas5t; CRISPR-associated protein Cas5t D Clst_1595 CRISPR protein K19090 cas5t; CRISPR-associated protein Cas5t D Clst_1818 CRISPR endoribonuclease K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D Clst_1620 CRISPR endoribonuclease K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D Clst_1598 CRISPR endoribonuclease K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D Clst_0299 hypothetical protein K19134 csx10; CRISPR-associated protein Csx10 D Clst_0298 DNA repair protein K09002 csm3; CRISPR-associated protein Csm3 D Clst_0426 helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Clst_1470 deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Clst_0425 restriction endonuclease K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Clst_1471 restriction endonuclease K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Clst_0424 methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Clst_1472 methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Clst_0417 DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Clst_0658 dam; Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D Clst_1180 DNA modification methylase K24451 zim; modification methylase D Clst_0835 restriction endonuclease K07448 mrr; restriction system protein D Clst_2405 growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Clst_1046 phage shock protein K03973 pspC; phage shock protein C D Clst_1509 phage shock protein K03973 pspC; phage shock protein C D Clst_2078 ftsZ; FtsZ K03531 ftsZ; cell division protein FtsZ D Clst_0081 mreB1; MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Clst_0313 mreB2; MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Clst_2072 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Clst_0879 nifS; NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Clst_1294 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:csd01504] D Clst_1515 aminoglycoside phosphotransferase K17910 aphD; aminoglycoside 2''-phosphotransferase [EC:2.7.1.190] D Clst_0188 major facilitator superfamily protein K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D Clst_1910 GTP-binding domain-containing protein K18220 tetM; ribosomal protection tetracycline resistance protein D Clst_0197 antirepressor membrane subunit K02172 blaR1; bla regulator protein blaR1 D Clst_0198 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Clst_0497 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D Clst_1032 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clst_1031 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D Clst_1129 hypothetical protein K18346 vanW; vancomycin resistance protein VanW D Clst_0980 efflux pump protein K18303 mexK; multidrug efflux pump C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:csd00537] D Clst_1886 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Clst_1976 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:csd03100] D Clst_2039 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clst_0656 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Clst_1035 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clst_0169 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clst_2365 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clst_0024 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Clst_0761 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clst_2035 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Clst_1208 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Clst_2444 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Clst_2441 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Clst_0615 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Clst_1215 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Clst_1207 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clst_2583 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clst_2073 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Clst_1034 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clst_0359 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clst_2442 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Clst_0614 tRNA-His K14226 tRNA-His; tRNA His D Clst_2657 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Clst_0695 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clst_0012 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clst_1132 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clst_1453 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clst_2003 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Clst_0616 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clst_0709 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Clst_2584 tRNA-Met K14230 tRNA-Met; tRNA Met D Clst_0013 tRNA-Met K14230 tRNA-Met; tRNA Met D Clst_0762 tRNA-Met K14230 tRNA-Met; tRNA Met D Clst_2443 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Clst_1403 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clst_0867 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clst_0097 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Clst_0073 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clst_0193 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clst_2599 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clst_2600 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Clst_0366 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clst_1209 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clst_2071 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Clst_1467 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Clst_1374 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Clst_2582 tRNA-Val K14237 tRNA-Val; tRNA Val D Clst_2445 tRNA-Val K14237 tRNA-Val; tRNA Val D Clst_1495 tRNA-Val K14237 tRNA-Val; tRNA Val D Clst_1757 tRNA-Val K14237 tRNA-Val; tRNA Val D Clst_0785 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clst_2040 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clst_2658 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Clst_2037 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clst_0786 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clst_2655 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Clst_0788 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clst_2036 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clst_2654 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Clst_2387 small signal recognition particle K01983 ffs; SRP RNA D Clst_0765 ribonuclease K01978 rnpB; M1 RNA D Clst_0711 transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Clst_2437 oxidoreductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D Clst_1520 pyruvate dehydrogenase complex E1 component beta subunit K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] D Clst_0758 Indolepyruvate ferredoxin oxidoreductase alpha subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D Clst_0759 pyruvate-ferredoxin oxidoreductase gamma subunit K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D Clst_1728 carboxynorspermidine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55] D Clst_0488 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D Clst_0902 fdx1; Fdx K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3] D Clst_0900 fhbA; FhbA K18330 hndA; NADP-reducing hydrogenase subunit HndA [EC:1.12.1.3] D Clst_0903 fhbB; FhbB K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3] D Clst_0904 fhbC; FhbC K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3] D Clst_0500 nfnB; NfnB K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Clst_0068 ribonucleoside-triphosphate reductase-activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D Clst_0015 pyruvate formate lyase activator K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Clst_1833 pyruvate formate lyase activator K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Clst_0421 L-isoaspartate-D-aspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D Clst_1785 methyltransferase domain-containing protein K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D Clst_0338 hypothetical protein K00686 tgl; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D Clst_0021 1-3-beta-galactosyl-N-acetylhexosamine phosphorylase K15534 K15534; beta-D-galactosyl-(1->4)-L-rhamnose phosphorylase [EC:2.4.1.247] D Clst_1087 mannosylglucose phosphorylase K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320] D Clst_2338 csaB; CsaB K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D Clst_2092 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Clst_0742 membrane protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Clst_1058 hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D Clst_1359 anti-sigma F regulator K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1] D Clst_1366 Hpr-Ser kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D Clst_0264 arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D Clst_1990 sulfotransferase K22905 stf3; omega-hydroxy-beta-dihydromenaquinone-9 sulfotransferase [EC:2.8.2.40] D Clst_0442 phosphatase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D Clst_0853 carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D Clst_2164 deacetylase K03930 estA; putative tributyrin esterase [EC:3.1.1.-] D Clst_1436 acyl-CoA thioester hydrolase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Clst_2398 sporulation protein 2E K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16] D Clst_1231 phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-] D Clst_0524 hypothetical protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D Clst_2202 hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Clst_0630 xynC; XynC K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Clst_0675 xynB; XynB K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Clst_0469 beta-1-4-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Clst_0716 beta-1-4-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Clst_1852 xynA; XynA K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D Clst_1067 beta-xylosidase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99] D Clst_2292 alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139] D Clst_0908 rhamnogalacturonase K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172] D Clst_0858 rhamnogalacturonase K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172] D Clst_1003 rhamnogalacturonase K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172] D Clst_0996 rhamnogalacturonase K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172] D Clst_1001 rhamnogalacturonase K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172] D Clst_1171 alpha-glucosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D Clst_2389 glucuronidase K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180] D Clst_0412 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clst_0714 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clst_1157 SLH domain-containing protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Clst_1304 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Clst_0804 deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Clst_1341 deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Clst_2259 deacetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-] D Clst_0520 deacetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-] D Clst_0162 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Clst_2264 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Clst_1449 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Clst_1483 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Clst_2454 tyrosine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2] D Clst_2438 spore photoproduct lyase K03716 splB; spore photoproduct lyase [EC:4.1.99.14] D Clst_2407 yjeF; YjeF K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Clst_0578 rhamnogalacturonan lyase K18197 yesW; rhamnogalacturonan endolyase [EC:4.2.2.23] D Clst_1418 N-acyl-D-glucosamine 2-epimerase K16213 cbe; cellobiose epimerase [EC:5.1.3.11] D Clst_0096 fucU; FucU K02431 fucU; L-fucose mutarotase [EC:5.1.3.29] D Clst_0916 glutamate 2-3-aminomutase K19814 eam; glutamate 2,3-aminomutase [EC:5.4.3.9] D Clst_2324 nfoD; NfoD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D Clst_2325 nfoC; NfoC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D Clst_2320 nfoB; NfoB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D Clst_0649 ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Clst_1779 ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Clst_0679 ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D Clst_0018 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A D Clst_0957 FOG-CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB C 99982 Energy metabolism D Clst_1640 fdx2; Fdx K05337 fer; ferredoxin D Clst_2323 nfoG; NfoG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D Clst_2322 nfoE; NfoE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D Clst_2321 nfoA; NfoA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D Clst_0880 nifU; NifU K04488 iscU; nitrogen fixation protein NifU and related proteins D Clst_1897 hypothetical protein K02596 nifX; nitrogen fixation protein NifX D Clst_1898 Fe-S oxidoreductase K02585 nifB; nitrogen fixation protein NifB D Clst_2330 hypothetical protein K14086 echA; ech hydrogenase subunit A D Clst_2328 hypothetical protein K14087 echB; ech hydrogenase subunit B D Clst_2326 nfhA; NfhA K14090 echE; ech hydrogenase subunit E D Clst_2327 nfhB; NfhB K14105 ehaN; energy-converting hydrogenase A subunit N C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Clst_1530 pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D Clst_0929 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein D Clst_0887 cell wall hydrolase K01449 cwlJ; cell wall hydrolase D Clst_2361 cell wall hydrolase K01449 cwlJ; cell wall hydrolase D Clst_0168 copper amine oxidase K01449 cwlJ; cell wall hydrolase C 99987 Cofactor metabolism C 99988 Secondary metabolism D Clst_1677 flavoprotein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D Clst_2576 transcriptional accessory protein K06959 tex; protein Tex D Clst_1937 hypothetical protein K09777 remA; extracellular matrix regulatory protein A D Clst_0004 hypothetical protein K24648 remB; extracellular matrix regulatory protein B C 99974 Translation C 99975 Protein processing D Clst_0263 hypothetical protein K19411 mcsA; protein arginine kinase activator D Clst_2386 trigger factor K03545 tig; trigger factor D Clst_0710 SsrA-binding protein K03664 smpB; SsrA-binding protein D Clst_1290 hydrogenase maturation factor K04655 hypE; hydrogenase expression/formation protein HypE D Clst_1489 magnesium chelatase-related protein K07391 comM; magnesium chelatase family protein D Clst_0311 regulator K16511 mecA1_2; adapter protein MecA 1/2 C 99976 Replication and repair D Clst_1742 methyltransferase domain-containing protein K07445 K07445; putative DNA methylase D Clst_2293 radC; RadC K03630 radC; DNA repair protein RadC D Clst_1488 dprA; DprA K04096 smf; DNA processing protein D Clst_0384 phage terminase small subunit K07474 xtmA; phage terminase small subunit D Clst_1272 ATPase K07478 ycaJ; putative ATPase D Clst_0933 transposase K07482 K07482; transposase, IS30 family D Clst_0184 transposase K07482 K07482; transposase, IS30 family D Clst_0007 transposase K07482 K07482; transposase, IS30 family D Clst_2446 transposase K07482 K07482; transposase, IS30 family D Clst_1033 transposase K07482 K07482; transposase, IS30 family D Clst_1177 transposase K07482 K07482; transposase, IS30 family D Clst_2048 transposase K07483 K07483; transposase D Clst_1699 transposase K07485 K07485; transposase D Clst_0784 transposase K07493 K07493; putative transposase D Clst_0142 transposase K07493 K07493; putative transposase D Clst_0385 transposase K07493 K07493; putative transposase D Clst_0365 transposase K07493 K07493; putative transposase D Clst_2359 transposase K07493 K07493; putative transposase D Clst_1644 transposase K07493 K07493; putative transposase D Clst_1750 transposase K07493 K07493; putative transposase D Clst_1870 transposase K07493 K07493; putative transposase D Clst_2235 transposase K07493 K07493; putative transposase D Clst_1739 transposase K07493 K07493; putative transposase D Clst_1740 transposase K07493 K07493; putative transposase D Clst_1745 transposase K07493 K07493; putative transposase D Clst_1164 transposase K07493 K07493; putative transposase D Clst_1178 transposase K07493 K07493; putative transposase D Clst_1183 transposase K07493 K07493; putative transposase D Clst_1211 transposase K07493 K07493; putative transposase D Clst_1402 transposase K07493 K07493; putative transposase D Clst_1247 transposase K07493 K07493; putative transposase D Clst_1869 transposase K07497 K07497; putative transposase D Clst_2049 transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D Clst_0292 DNA-binding protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Clst_1062 phosphate-sulfate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D Clst_1958 sodium transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D Clst_1829 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D Clst_1687 amino acid uptake carrier K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family C 99978 Cell growth D Clst_0103 bofA; BofA K06317 bofA; inhibitor of the pro-sigma K processing machinery D Clst_2045 cotJB; CotJB K06333 cotJB; spore coat protein JB D Clst_2664 RNA-binding protein K06346 jag; spoIIIJ-associated protein D Clst_1120 membrane protein K06373 spmA; spore maturation protein A D Clst_1121 membrane protein K06374 spmB; spore maturation protein B D Clst_0357 anti-anti-sigma regulator K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D Clst_1360 anti-anti-sigma regulator K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D Clst_2296 sporulation protein 2R K06387 spoIIR; stage II sporulation protein R D Clst_0505 sporulation protein 3AA K06390 spoIIIAA; stage III sporulation protein AA D Clst_0506 sporulation protein 3AB K06391 spoIIIAB; stage III sporulation protein AB D Clst_0507 sporulation protein 3AC K06392 spoIIIAC; stage III sporulation protein AC D Clst_0508 sporulation protein 3AD K06393 spoIIIAD; stage III sporulation protein AD D Clst_0509 sporulation protein 3AE K06394 spoIIIAE; stage III sporulation protein AE D Clst_0510 sporulation protein 3AF K06395 spoIIIAF; stage III sporulation protein AF D Clst_0511 hypothetical protein K06396 spoIIIAG; stage III sporulation protein AG D Clst_0512 sporulation protein K06397 spoIIIAH; stage III sporulation protein AH D Clst_1274 sporulation protein 4A K06398 spoIVA; stage IV sporulation protein A D Clst_1871 recombinase K06400 spoIVCA; site-specific DNA recombinase D Clst_2051 recombinase K06400 spoIVCA; site-specific DNA recombinase D Clst_2304 sporulation protein 5AC K06405 spoVAC; stage V sporulation protein AC D Clst_2303 sporulation protein 5AD K06406 spoVAD; stage V sporulation protein AD D Clst_2302 sporulation protein 5AE K06407 spoVAE; stage V sporulation protein AE D Clst_1998 2-hydroxyacid dehydrogenase K06410 spoVFA; dipicolinate synthase subunit A D Clst_1997 dipicolinic acid synthetase subunit B K06411 spoVFB; dipicolinate synthase subunit B D Clst_2396 hypothetical protein K06412 spoVG; stage V sporulation protein G D Clst_2601 spore protein K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP) D Clst_0522 yqfD; YqfD K06438 yqfD; similar to stage IV sporulation protein D Clst_0584 gerA1; GerA K06295 gerKA; spore germination protein KA D Clst_2058 gerA3; GerA K06295 gerKA; spore germination protein KA D Clst_1494 gerA2; GerA K06295 gerKA; spore germination protein KA D Clst_0585 germination protein K06297 gerKC; spore germination protein KC D Clst_2059 germination protein K06297 gerKC; spore germination protein KC D Clst_1492 germination protein K06297 gerKC; spore germination protein KC D Clst_0026 sporulation protein K06298 gerM; germination protein M D Clst_2425 sporulation protein K06298 gerM; germination protein M D Clst_2360 ypeB; YpeB K06313 ypeB; spore germination protein C 99993 Cell motility D Clst_1862 tfoX; TfoX K07343 tfoX; DNA transformation protein and related proteins C 99995 Signaling proteins D Clst_1446 typA; TypA K06207 typA; GTP-binding protein D Clst_0523 phoH; PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D Clst_0979 efflux transporter K01993 ABC-2.TX; HlyD family secretion protein D Clst_2651 efflux pump K02005 ABC.CD.TX; HlyD family secretion protein C 99994 Others D Clst_2125 phoU; PhoU K02039 phoU; phosphate transport system protein D Clst_0182 metal-binding domain-containing protein K07216 hr; hemerythrin D Clst_1507 metal-binding domain-containing protein K07216 hr; hemerythrin B B 09194 Poorly characterized C 99996 General function prediction only D Clst_0181 membrane protein K07058 K07058; membrane protein D Clst_1603 hypothetical protein K03744 lemA; LemA protein D Clst_1782 hypothetical protein K01421 yhgE; putative membrane protein D Clst_2290 membrane protein K08974 K08974; putative membrane protein C 99997 Function unknown D Clst_2012 radical SAM maturase K06871 K06871; uncharacterized protein D Clst_2618 arylsulfatase regulator K06871 K06871; uncharacterized protein D Clst_1734 phosphohydrolase K06885 K06885; uncharacterized protein D Clst_0569 thioredoxin domain-containing protein K06888 K06888; uncharacterized protein D Clst_2001 lysophospholipase K06889 K06889; uncharacterized protein D Clst_0356 ATPase K06923 K06923; uncharacterized protein D Clst_0464 CoA-binding protein K06929 K06929; uncharacterized protein D Clst_0697 hypothetical protein K06950 K06950; uncharacterized protein D Clst_1150 RNA-binding protein K06960 K06960; uncharacterized protein D Clst_1781 transporter K07003 K07003; uncharacterized protein D Clst_2632 hydrolase K07045 K07045; uncharacterized protein D Clst_0974 oxidoreductase K07079 K07079; uncharacterized protein D Clst_2129 oxidoreductase K07079 K07079; uncharacterized protein D Clst_0178 permease K07090 K07090; uncharacterized protein D Clst_1295 phosphoesterase K07095 K07095; uncharacterized protein D Clst_0285 phosphoesterase K07096 K07096; uncharacterized protein D Clst_2271 phosphohydrolase K07098 K07098; uncharacterized protein D Clst_2278 phosphohydrolase K07099 K07099; uncharacterized protein D Clst_1614 dehydrogenase K07137 K07137; uncharacterized protein D Clst_2344 dehydrogenase K07137 K07137; uncharacterized protein D Clst_1766 radical SAM protein K07139 K07139; uncharacterized protein D Clst_1238 radical SAM protein K07139 K07139; uncharacterized protein D Clst_1138 membrane protein K07150 K07150; uncharacterized protein D Clst_2666 hypothetical protein K08998 K08998; uncharacterized protein D Clst_0949 hypothetical protein K09700 K09700; uncharacterized protein D Clst_1302 hypothetical protein K09729 K09729; uncharacterized protein D Clst_0478 polymerase K09749 K09749; uncharacterized protein D Clst_0691 polymerase K09749 K09749; uncharacterized protein D Clst_1526 hypothetical protein K09764 K09764; uncharacterized protein D Clst_1291 hypothetical protein K09766 K09766; uncharacterized protein D Clst_1193 hypothetical protein K09770 K09770; uncharacterized protein D Clst_2152 hypothetical protein K09775 K09775; uncharacterized protein D Clst_2434 hypothetical protein K09776 K09776; uncharacterized protein D Clst_2170 hypothetical protein K09779 K09779; uncharacterized protein D Clst_1147 hypothetical protein K09787 K09787; uncharacterized protein D Clst_1760 hypothetical protein K09805 K09805; uncharacterized protein D Clst_0020 arabinofuranosidase K09955 K09955; uncharacterized protein D Clst_0253 arabinofuranosidase K09955 K09955; uncharacterized protein D Clst_2031 hypothetical protein K01163 K01163; uncharacterized protein D Clst_0491 ribosomal protein K07584 ysxB; uncharacterized protein D Clst_1063 phosphate transport regulator K07220 K07220; uncharacterized protein D Clst_1038 nucleic acid-binding protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024