+D GENES KO
#
KEGG Orthology (KO) - Caldimicrobium thiodismutans
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cthi00010]
D THC_1056 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D THC_1017 phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D THC_1161 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D THC_1485 aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D THC_0172 fructose-1 6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D THC_1294 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D THC_0542 nitrogen utilization protein B K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D THC_0544 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D THC_1293 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D THC_0736 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D THC_0862 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D THC_0284 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D THC_0543 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D THC_1289 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D THC_0010 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D THC_0011 pyruvate synthase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D THC_0008 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D THC_0009 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D THC_1440 2-oxoacid ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THC_1739 2-ketoisovalerate ferredoxin oxidoreductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THC_1439 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THC_1740 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THC_0133 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D THC_0109 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D THC_1526 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:cthi00020]
D THC_1672 histone-lysine N-methyltransferase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3]
D THC_0020 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D THC_1543 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D THC_1440 2-oxoacid ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THC_1739 2-ketoisovalerate ferredoxin oxidoreductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THC_1439 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THC_1740 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THC_1741 2-oxoacid:ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D THC_1738 tungsten formylmethanofuran dehydrogenase K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D THC_1169 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D THC_1668 fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D THC_0946 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D THC_0246 biotin attachment protein K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D THC_1801 acetyl-CoA carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D THC_0010 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D THC_0011 pyruvate synthase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D THC_0008 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D THC_0009 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:cthi00030]
D THC_1017 phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D THC_1454 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D THC_0454 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D THC_1215 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D THC_0264 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D THC_1526 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D THC_0823 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D THC_1485 aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D THC_0172 fructose-1 6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D THC_1161 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:cthi00040]
D THC_1423 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D THC_0845 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D THC_1454 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D THC_1245 hypothetical protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:cthi00051]
D THC_1526 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D THC_1245 hypothetical protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D THC_1161 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D THC_1485 aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D THC_0172 fructose-1 6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D THC_1294 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D THC_0264 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:cthi00052]
D THC_1568 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D THC_0845 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D THC_1526 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D THC_1056 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D THC_1161 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism [PATH:cthi00053]
D THC_1423 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D THC_1246 nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:cthi00500]
D THC_0845 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D THC_0894 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D THC_0893 alpha-amylase K07405 E3.2.1.1A; alpha-amylase [EC:3.2.1.1]
D THC_1526 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D THC_1056 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D THC_1017 phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cthi00520]
D THC_1168 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D THC_0537 glutamine amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D THC_0431 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D THC_1077 hypothetical protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D THC_1661 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D THC_0786 hypothetical protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D THC_1547 oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D THC_1510 aminotransferase DegT K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D THC_1188 UDP-N-acetyl-D-galactosamine dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D THC_1056 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D THC_1526 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D THC_0845 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D THC_1423 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D THC_1568 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D THC_1246 nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D THC_1017 phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:cthi00620]
D THC_0109 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D THC_0010 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D THC_0011 pyruvate synthase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D THC_0008 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D THC_0009 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D THC_1440 2-oxoacid ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THC_1739 2-ketoisovalerate ferredoxin oxidoreductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THC_1439 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THC_1740 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THC_0133 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D THC_1800 acetyl-CoA carboxylase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D THC_1576 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D THC_0509 hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D THC_1422 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D THC_1368 hydrolase glyoxylase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D THC_0246 biotin attachment protein K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D THC_1801 acetyl-CoA carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D THC_0946 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D THC_1169 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D THC_1668 fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D THC_1461 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D THC_0543 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D THC_1289 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D THC_0773 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D THC_1592 alpha-isopropylmalate/homocitrate synthase family transferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cthi00630]
D THC_0109 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D THC_0946 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D THC_0020 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D THC_0002 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D THC_1642 hypothetical protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D THC_1612 beta-phosphoglucomutase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D THC_1363 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D THC_0004 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D THC_1736 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D THC_1766 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D THC_1495 oxidoreductase K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D THC_1496 hypothetical protein K00127 fdoI; formate dehydrogenase subunit gamma
C 00640 Propanoate metabolism [PATH:cthi00640]
D THC_0109 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D THC_0010 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D THC_0011 pyruvate synthase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D THC_0008 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D THC_0009 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D THC_1800 acetyl-CoA carboxylase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
C 00650 Butanoate metabolism [PATH:cthi00650]
D THC_0010 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D THC_0011 pyruvate synthase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D THC_0008 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D THC_0009 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D THC_1440 2-oxoacid ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THC_1739 2-ketoisovalerate ferredoxin oxidoreductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THC_1439 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THC_1740 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THC_0456 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D THC_0455 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:cthi00660]
D THC_0456 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D THC_0455 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D THC_0566 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D THC_0563 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D THC_1605 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cthi00562]
D THC_0976 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D THC_0990 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D THC_1294 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cthi00190]
D THC_0916 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D THC_1298 NADH-quinone oxidoreductase K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D THC_1299 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D THC_0915 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D THC_1300 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D THC_1301 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D THC_0914 NADH-quinone oxidoreductase K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D THC_1302 NADH-quinone oxidoreductase K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D THC_0913 hypothetical protein K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D THC_1304 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D THC_0912 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D THC_1305 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D THC_1306 NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D THC_0908 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D THC_1307 NADH:ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D THC_0907 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D THC_1308 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D THC_0918 NADH dehydrogenase K03935 NDUFS2; NADH dehydrogenase (ubiquinone) Fe-S protein 2 [EC:7.1.1.2]
D THC_0919 NADH dehydrogenase subunit B K03940 NDUFS7; NADH dehydrogenase (ubiquinone) Fe-S protein 7 [EC:7.1.1.2]
D THC_0520 hypothetical protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D THC_0974 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D THC_0975 cytochrome C oxidase assembly protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D THC_1504 cytochrome C552 K08738 CYC; cytochrome c
D THC_0297 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D THC_0518 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D THC_0299 ATP F0F1 synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D THC_0513 ATP synthase F0F1 subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D THC_0298 ATP F0F1 synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D THC_0519 ATP synthase F1 gammsubunit A K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D THC_0296 ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D THC_0517 hypothetical protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D THC_0300 ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D THC_0514 hypothetical protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D THC_0515 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D THC_1353 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D THC_0295 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D THC_0294 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D THC_0516 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D THC_1354 ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D THC_0311 inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:cthi00710]
D THC_1293 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D THC_0542 nitrogen utilization protein B K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D THC_0544 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D THC_1485 aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D THC_0454 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D THC_0264 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D THC_1294 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D THC_1454 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D THC_1215 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D THC_1461 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D THC_0543 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D THC_0946 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:cthi00720]
D THC_0010 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D THC_0011 pyruvate synthase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D THC_0008 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D THC_0009 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D THC_1289 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D THC_0543 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D THC_1461 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D THC_0246 biotin attachment protein K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D THC_1801 acetyl-CoA carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D THC_0946 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D THC_1169 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D THC_1668 fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D THC_1440 2-oxoacid ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THC_1739 2-ketoisovalerate ferredoxin oxidoreductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THC_1439 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THC_1740 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THC_1741 2-oxoacid:ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D THC_1738 tungsten formylmethanofuran dehydrogenase K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D THC_1543 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D THC_0020 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D THC_1800 acetyl-CoA carboxylase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D THC_1753 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D THC_1344 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D THC_1761 hypothetical protein K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D THC_1765 dihydropteroate synthase K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258]
D THC_1754 carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D THC_1762 acetyl-CoA decarbonylase K14138 acsB; acetyl-CoA synthase [EC:2.3.1.169]
D THC_1763 acetyl-CoA synthase subunit gamma K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D THC_0109 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:cthi00680]
D THC_1766 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D THC_1495 oxidoreductase K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D THC_1496 hypothetical protein K00127 fdoI; formate dehydrogenase subunit gamma
D THC_1763 acetyl-CoA synthase subunit gamma K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D THC_1754 carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D THC_0004 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D THC_0284 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D THC_1461 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D THC_0946 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D THC_1485 aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D THC_0172 fructose-1 6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D THC_1161 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D THC_1756 heterodisulfide reductase K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D THC_1758 4Fe-4S ferredoxin K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D THC_1759 methyl-viologen-reducing hydrogenase delta subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D THC_1757 methyl-viologen-reducing hydrogenase subunit delta K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D THC_0109 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D THC_0010 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D THC_0011 pyruvate synthase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D THC_0008 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D THC_0009 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D THC_1289 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D THC_0736 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D THC_0862 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D THC_0800 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00910 Nitrogen metabolism [PATH:cthi00910]
D THC_1378 nitrate reductase K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D THC_1376 cytochrome C K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D THC_0459 2-keto-3-deoxygluconate permease K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D THC_1363 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
C 00920 Sulfur metabolism [PATH:cthi00920]
D THC_1309 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D THC_1561 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D THC_0032 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D THC_1312 adenylylsulfate reductase subunit alpha K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]
D THC_1311 adenylylsulfate reductase subunit beta K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2]
D THC_0410 sulfite reductase K00385 asrC; anaerobic sulfite reductase subunit C
D THC_0449 sulfite reductase K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D THC_0450 sulfite reductase K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D THC_0590 menaquinol oxidoreductase K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10]
D THC_0591 hdr menaquinol oxidoreductase iron-sulfur subunit K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10]
D THC_0592 cytochrome C K27189 dsrJ; [DsrC]-trisulfide reductase subunit J
D THC_0593 4Fe-4S ferredoxin K27190 dsrO; [DsrC]-trisulfide reductase subunit O
D THC_0594 menaquinol oxidoreductase K27191 dsrP; [DsrC]-trisulfide reductase subunit P
D THC_1324 Fe-S-cluster-containing hydrogenase subunit K08358 ttrB; tetrathionate reductase subunit B
D THC_0921 thiosulfate reductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D THC_0474 molybdopterin oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D THC_0475 4Fe-4S ferredoxin K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit
D THC_0476 molybdopterin oxidoreductase K00185 dmsC; dimethyl sulfoxide reductase membrane subunit
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cthi00061]
D THC_1800 acetyl-CoA carboxylase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D THC_0262 acyl carrier protein K02078 acpP; acyl carrier protein
D THC_1737 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D THC_0762 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D THC_0263 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D THC_0500 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D THC_1536 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D THC_0133 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cthi00561]
D THC_0761 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D THC_0439 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D THC_0992 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:cthi00564]
D THC_1369 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D THC_0439 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D THC_0992 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D THC_0690 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D THC_0336 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D THC_0335 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D THC_1453 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D THC_0504 phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D THC_1482 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cthi00230]
D THC_1526 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D THC_0823 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D THC_1104 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D THC_0061 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D THC_0203 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D THC_1159 phosphoribosylformylglycinamidine synthase K23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3]
D THC_0070 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D THC_0063 phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D THC_0062 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D THC_0027 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D THC_0948 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D THC_1541 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D THC_1226 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D THC_0161 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D THC_0744 hypothetical protein K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D THC_0426 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D THC_1442 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D THC_1651 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D THC_1583 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D THC_0427 deoxyribonucleotide triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D THC_0827 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D THC_0338 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D THC_0257 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D THC_1570 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D THC_0580 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D THC_1650 hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D THC_1802 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D THC_1478 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D THC_1064 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D THC_1699 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D THC_0562 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D THC_1460 HIT family hydrolase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D THC_1561 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D THC_1309 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:cthi00240]
D THC_1793 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D THC_1223 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D THC_1084 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D THC_1085 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D THC_1001 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D THC_1002 hypothetical protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D THC_1230 hypothetical protein K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D THC_0587 hdr menaquinol oxidoreductase iron-sulfur subunit K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D THC_0687 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D THC_1583 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D THC_0562 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D THC_0023 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D THC_0538 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D THC_0949 pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65]
D THC_1226 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D THC_0888 bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D THC_1478 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D THC_0257 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D THC_0003 CMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D THC_0238 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D THC_0277 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D THC_0276 hypothetical protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cthi00250]
D THC_1748 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THC_1774 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D THC_0861 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D THC_1557 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D THC_1187 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D THC_1199 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D THC_0626 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D THC_1216 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D THC_0869 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D THC_1802 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D THC_0948 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D THC_1084 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D THC_1363 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D THC_1793 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D THC_1223 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D THC_0203 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D THC_0537 glutamine amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D THC_1104 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cthi00260]
D THC_1593 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D THC_0739 semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D THC_0256 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D THC_0212 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D THC_0631 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D THC_0004 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D THC_0736 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D THC_0862 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D THC_0800 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D THC_1736 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D THC_0336 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D THC_1112 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D THC_1111 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D THC_1016 tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:cthi00270]
D THC_0401 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D THC_1173 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D THC_1639 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D THC_1172 spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D THC_1599 spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D THC_0426 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D THC_0108 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D THC_0279 methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D THC_0400 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D THC_1593 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D THC_0739 semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D THC_0256 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D THC_0177 hypothetical protein K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16]
D THC_0798 (Fe-S)-binding protein K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin
D THC_0839 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D THC_1748 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THC_1774 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D THC_0946 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D THC_0214 cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D THC_0800 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:cthi00280]
D THC_0839 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D THC_0853 6-phosphogluconate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cthi00290]
D THC_0566 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D THC_0563 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D THC_1605 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D THC_0456 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D THC_0455 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D THC_1243 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D THC_0186 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D THC_0839 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D THC_0626 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D THC_0773 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D THC_1592 alpha-isopropylmalate/homocitrate synthase family transferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cthi00300]
D THC_0256 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D THC_1593 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D THC_0739 semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D THC_1115 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D THC_1406 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D THC_1463 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D THC_1114 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D THC_0989 diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D THC_1517 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D THC_0792 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D THC_0791 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
C 00220 Arginine biosynthesis [PATH:cthi00220]
D THC_1820 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D THC_1216 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D THC_0869 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D THC_0203 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D THC_1363 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D THC_1793 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D THC_1223 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D THC_1748 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THC_1774 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D THC_0626 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D THC_0322 acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D THC_1228 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D THC_0641 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D THC_1746 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D THC_1463 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:cthi00330]
D THC_0404 creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D THC_0326 5-oxoprolinase K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D THC_0327 5-oxoprolinase K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D THC_1640 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D THC_1172 spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D THC_1599 spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D THC_1173 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D THC_1639 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D THC_1268 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D THC_0903 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D THC_0963 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D THC_1748 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THC_1774 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:cthi00340]
D THC_1812 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D THC_1811 phosphoribosyl-AMP cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D THC_0979 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D THC_0720 imidazole glycerol phosphate synthase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D THC_1181 imidazole glycerol phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D THC_1588 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D THC_0165 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D THC_1160 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:cthi00350]
D THC_1748 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THC_1774 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D THC_0165 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D THC_0133 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:cthi00360]
D THC_1264 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D THC_1464 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D THC_1670 phenylacetic acid degradation protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D THC_1748 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THC_1774 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D THC_0165 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cthi00400]
D THC_1527 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D THC_1113 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D THC_1618 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D THC_1619 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D THC_1621 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D THC_1620 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D THC_0206 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D THC_0994 anthranilate synthase subunit I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D THC_0993 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D THC_0288 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D THC_0778 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D THC_1810 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D THC_1112 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D THC_1111 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D THC_1016 tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D THC_1768 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D THC_0331 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D THC_1748 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THC_1774 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D THC_0165 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cthi00410]
D THC_0929 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D THC_0930 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:cthi00450]
D THC_0866 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D THC_1567 oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D THC_1281 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D THC_1309 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D THC_1500 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D THC_0627 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D THC_1151 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D THC_0004 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cthi00470]
D THC_0865 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D THC_0692 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D THC_0203 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D THC_1409 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D THC_0789 UDP-N-acetylmuramoylalanine ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D THC_1114 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D THC_1517 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cthi00480]
D THC_1543 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D THC_1172 spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D THC_1599 spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:cthi00540]
D THC_1537 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D THC_1086 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D THC_1098 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D THC_1538 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D THC_1540 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D THC_1458 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D THC_0239 arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D THC_0228 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D THC_0229 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D THC_0036 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D THC_0425 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D THC_1415 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D THC_0283 carbohydrate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D THC_0159 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D THC_0842 rfaE bifunctional protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D THC_0043 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D THC_0158 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D THC_0510 hypothetical protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D THC_1551 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cthi00541]
D THC_0845 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D THC_1568 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D THC_1423 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D THC_1246 nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D THC_1077 hypothetical protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D THC_1188 UDP-N-acetyl-D-galactosamine dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D THC_1547 oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D THC_1510 aminotransferase DegT K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00550 Peptidoglycan biosynthesis [PATH:cthi00550]
D THC_1661 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D THC_0786 hypothetical protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D THC_0787 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D THC_0789 UDP-N-acetylmuramoylalanine ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D THC_0792 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D THC_0692 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D THC_0791 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D THC_0689 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D THC_1664 UDP-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D THC_0790 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D THC_0788 hypothetical protein K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D THC_0489 peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D THC_1128 hypothetical protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D THC_0292 hypothetical protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D THC_1424 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D THC_1014 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:cthi00552]
D THC_1664 UDP-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cthi00730]
D THC_1046 phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D THC_1447 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D THC_1533 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D THC_1167 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D THC_0582 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D THC_0653 ribulose-1,5-biphosphate synthetase K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59]
D THC_1341 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D THC_1582 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D THC_0483 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D THC_1064 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D THC_1699 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:cthi00740]
D THC_1343 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D THC_1132 DeoR faimly transcriptional regulator K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D THC_0111 5-amino-6-(5-phosphoribosylamino)uracil reductase K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302]
D THC_1292 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D THC_0776 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D THC_1224 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D THC_1735 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:cthi00750]
D THC_1421 16S rRNA maturation RNase YbeY K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D THC_0212 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D THC_0631 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cthi00760]
D THC_0861 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D THC_0026 quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D THC_0312 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D THC_0161 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D THC_0744 hypothetical protein K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D THC_1226 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D THC_0962 hypothetical protein K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D THC_0562 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D THC_0097 NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D THC_0897 hypothetical protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:cthi00770]
D THC_0456 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D THC_0455 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D THC_1243 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D THC_0186 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D THC_1523 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D THC_0930 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D THC_1507 Baf family transcriptional regulator K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D THC_1235 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D THC_0562 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D THC_0599 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D THC_1133 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D THC_0265 hypothetical protein K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D THC_0839 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D THC_0929 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:cthi00780]
D THC_0263 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D THC_0500 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D THC_1536 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D THC_0273 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D THC_1798 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
D THC_1736 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:cthi00790]
D THC_0859 GTP cyclohydrolase K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D THC_0483 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D THC_0988 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D THC_0434 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D THC_0469 hypothetical protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D THC_1343 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D THC_1604 hypothetical protein K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D THC_0385 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D THC_0386 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D THC_0850 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D THC_1165 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D THC_1149 molybdenum cofactor biosynthesis protein MoeA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D THC_0182 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D THC_1501 cytoplasmic protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D THC_1023 hypothetical protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:cthi00670]
D THC_1752 formate--tetrahydrofolate ligase K00288 MTHFD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase / formyltetrahydrofolate synthetase [EC:1.5.1.5 3.5.4.9 6.3.4.3]
D THC_1753 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D THC_0004 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D THC_1541 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D THC_1579 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D THC_0276 hypothetical protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D THC_1344 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D THC_1761 hypothetical protein K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D THC_0301 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cthi00860]
D THC_0038 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D THC_0968 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D THC_1244 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D THC_1018 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D THC_0670 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D THC_0671 uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D THC_0497 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D THC_1535 transcriptional regulator K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D THC_1636 hypothetical protein K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D THC_1164 transcriptional regulator K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D THC_1616 Fe-S oxidoreductase K22226 ahbC; Fe-coproporphyrin III synthase
D THC_1234 radical SAM protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D THC_0072 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D THC_0074 precorrin-3B C17-methyltransferase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131]
D THC_0073 cobalt-precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D THC_0078 precorrin 6A synthase K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D THC_0077 precorrin-6y C5,15-methyltransferase subunit CbiT K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D THC_0079 hypothetical protein K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D THC_0595 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D THC_0080 cobyrinic acid A,C-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D THC_0601 magnesium chelatase K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D THC_0617 cobaltochelatase K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D THC_0618 hypothetical protein K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D THC_0241 cobinamide adenolsyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D THC_0083 cobalamin biosynthesis protein CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D THC_0082 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D THC_0076 hypothetical protein K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D THC_0084 cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D THC_0085 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D THC_0081 L-threonine-O-3-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D THC_0620 hypothetical protein K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D THC_0619 magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cthi00130]
D THC_0940 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D THC_1103 hypothetical protein K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D THC_1735 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D THC_0245 hypothetical protein K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D THC_0244 hypothetical protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D THC_1560 radical SAM protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D THC_1484 radical SAM protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D THC_0243 hypothetical protein K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40]
D THC_1277 hypothetical protein K11783 mqnB; futalosine hydrolase [EC:3.2.2.26]
D THC_0242 hypothetical protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D THC_1278 1,4-dihydroxy-6-naphthoate synthase K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29]
D THC_1286 NAD(P)H quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cthi00900]
D THC_0582 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D THC_0817 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D THC_0018 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D THC_0822 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D THC_0175 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D THC_0898 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D THC_1735 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D THC_0496 hypothetical protein K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D THC_0583 hypothetical protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D THC_1613 hypothetical protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D THC_0689 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D THC_1505 hypothetical protein K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D THC_0454 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:cthi00332]
D THC_0903 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D THC_0963 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cthi00261]
D THC_1309 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D THC_1593 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D THC_0739 semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D THC_1115 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D THC_1406 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cthi00521]
D THC_1056 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D THC_1526 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D THC_0990 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D THC_0976 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D THC_1056 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:cthi00401]
D THC_0331 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D THC_1748 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THC_1774 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D THC_0165 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D THC_0994 anthranilate synthase subunit I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D THC_0993 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D THC_1737 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D THC_0500 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D THC_0262 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:cthi00999]
D THC_0401 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D THC_1619 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D THC_1669 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00627 Aminobenzoate degradation [PATH:cthi00627]
D THC_1576 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D THC_1735 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:cthi00625]
D THC_0133 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D THC_1669 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:cthi00633]
D THC_1360 hydrogenase 2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D THC_1361 Ni/Fe hydrogenase K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D THC_1754 carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D THC_0010 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D THC_0011 pyruvate synthase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D THC_0008 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D THC_0009 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D THC_0449 sulfite reductase K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D THC_0450 sulfite reductase K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D THC_1669 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:cthi00626]
D THC_0133 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cthi03020]
D THC_0128 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D THC_0129 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D THC_1705 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D THC_0184 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cthi03010]
D THC_1648 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D THC_0685 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D THC_1685 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D THC_1704 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D THC_1695 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D THC_0872 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D THC_1675 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D THC_1692 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D THC_1745 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D THC_1678 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D THC_1703 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D THC_1674 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D THC_1702 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D THC_0130 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D THC_0806 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D THC_1688 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D THC_0873 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D THC_1683 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D THC_1158 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D THC_1632 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D THC_0125 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D THC_1682 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D THC_1679 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D THC_1680 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D THC_1691 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D THC_1693 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D THC_0127 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D THC_0874 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D THC_0126 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D THC_0124 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D THC_1744 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D THC_1689 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D THC_1697 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D THC_1686 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D THC_1706 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D THC_1694 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D THC_0261 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D THC_1401 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D THC_0683 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D THC_1684 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D THC_1681 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D THC_1690 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D THC_0824 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D THC_0684 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D THC_0579 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D THC_1687 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D THC_1696 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D THC_1070 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D THC_0760 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D THC_0120 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D THC_1809 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D THC_1402 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D THC_1120 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D THC_1124 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D THC_1127 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cthi00970]
D THC_1338 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D THC_1157 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D THC_1123 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D THC_1076 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D THC_0482 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D THC_1240 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D THC_1257 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D THC_1413 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D THC_0384 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D THC_1629 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D THC_1052 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D THC_0829 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D THC_0951 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D THC_1770 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D THC_0012 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D THC_0116 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D THC_1628 tRNA-His K14226 tRNA-His; tRNA His
D THC_1122 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D THC_0633 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D THC_0819 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D THC_0136 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D THC_0250 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D THC_1038 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D THC_0828 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D THC_1141 tRNA-Met K14230 tRNA-Met; tRNA Met
D THC_0854 tRNA-Met K14230 tRNA-Met; tRNA Met
D THC_0383 tRNA-Met K14230 tRNA-Met; tRNA Met
D THC_1348 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D THC_0065 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D THC_0423 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D THC_1174 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D THC_1066 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D THC_1630 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D THC_0624 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D THC_0131 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D THC_1631 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D THC_0118 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D THC_0121 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D THC_0115 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D THC_0723 tRNA-Val K14237 tRNA-Val; tRNA Val
D THC_1239 tRNA-Val K14237 tRNA-Val; tRNA Val
D THC_0871 tRNA-Val K14237 tRNA-Val; tRNA Val
D THC_1032 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D THC_0038 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D THC_1514 glutamyl-tRNA(Gln) amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D THC_0280 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D THC_1515 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D THC_1584 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D THC_1803 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D THC_0069 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D THC_0068 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D THC_0722 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D THC_1520 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D THC_0627 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D THC_1088 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D THC_1590 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D THC_1151 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D THC_1579 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D THC_0642 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D THC_1544 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D THC_1601 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D THC_0575 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D THC_0320 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D THC_1099 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D THC_0995 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D THC_1400 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D THC_1399 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D THC_0672 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D THC_0039 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cthi03060]
D THC_1698 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D THC_0122 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D THC_0818 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D THC_1578 preprotein translocase subunit SecF K12257 secDF; SecD/SecF fusion protein
D THC_1772 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D THC_1806 preprotein translocase subunit YajC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D THC_1284 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D THC_1026 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D THC_1065 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D THC_0452 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D THC_0864 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D THC_0863 hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC
D THC_0202 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D THC_0453 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D THC_0834 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D THC_1602 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cthi04122]
D THC_1533 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D THC_1167 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D THC_1429 SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D THC_1534 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D THC_0148 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D THC_0804 hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D THC_1149 molybdenum cofactor biosynthesis protein MoeA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D THC_0211 molybdenum cofactor biosynthesis protein MoaD K03636 moaD; sulfur-carrier protein
D THC_0209 molybdenum cofactor biosynthesis protein MoeB K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D THC_0182 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D THC_1501 cytoplasmic protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 03050 Proteasome
C 03018 RNA degradation [PATH:cthi03018]
D THC_0284 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D THC_0162 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D THC_1778 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D THC_1332 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D THC_1256 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D THC_1479 ribonuclease K18682 rny; ribonucrease Y [EC:3.1.-.-]
D THC_1161 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D THC_0314 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D THC_0146 molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D THC_0462 hypothetical protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D THC_1474 polynucleotide adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cthi03030]
D THC_0905 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D THC_1490 DNA polymerase III subunit gamma/tau, partial K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D THC_1660 hypothetical protein, partial K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D THC_1444 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D THC_0875 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D THC_1634 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D THC_0969 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D THC_1734 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D THC_0260 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D THC_1783 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D THC_0040 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cthi03410]
D THC_0329 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D THC_1135 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D THC_1625 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D THC_0269 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D THC_1783 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D THC_1569 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D THC_0040 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cthi03420]
D THC_0405 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D THC_0180 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D THC_1427 hypothetical protein K03701 uvrA; excinuclease ABC subunit A
D THC_1472 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D THC_0651 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D THC_0468 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D THC_0381 DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D THC_0407 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D THC_1783 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D THC_0040 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:cthi03430]
D THC_0961 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D THC_1633 hypothetical protein K07456 mutS2; DNA mismatch repair protein MutS2
D THC_0943 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D THC_0468 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D THC_0381 DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D THC_0407 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D THC_0585 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D THC_0584 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D THC_1569 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D THC_0969 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D THC_0905 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D THC_1444 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D THC_1490 DNA polymerase III subunit gamma/tau, partial K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D THC_1660 hypothetical protein, partial K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D THC_0040 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D THC_1410 restriction endonuclease K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:cthi03440]
D THC_1569 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D THC_0969 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D THC_1082 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O)
D THC_1488 recombinase RecR K06187 recR; recombination protein RecR
D THC_0282 recombinase RecA K03553 recA; recombination protein RecA
D THC_1783 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D THC_0522 hypothetical protein K03550 ruvA; holliday junction DNA helicase RuvA
D THC_1524 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D THC_0523 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D THC_0332 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D THC_0905 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D THC_1444 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D THC_1490 DNA polymerase III subunit gamma/tau, partial K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D THC_1660 hypothetical protein, partial K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D THC_0844 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cthi02010]
D THC_1797 ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D THC_1796 ABC transporter permease K02018 modB; molybdate transport system permease protein
D THC_1795 ABC transporter K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D THC_0189 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D THC_0187 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D THC_0188 ABC transporter K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D THC_0932 protein sphX K02040 pstS; phosphate transport system substrate-binding protein
D THC_1044 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D THC_0933 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D THC_1043 phosphate ABC transporter permease PstC K02037 pstC; phosphate transport system permease protein
D THC_0934 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D THC_1042 phosphate transporter permease subunit PtsA K02038 pstA; phosphate transport system permease protein
D THC_0935 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D THC_1041 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D THC_1469 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D THC_1468 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D THC_1467 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D THC_1466 branched-chain amino acid ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D THC_1465 amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D THC_1577 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein
D THC_0560 hypothetical protein K09816 znuB; zinc transport system permease protein
D THC_0561 ABC transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D THC_0750 hypothetical protein K02009 cbiN; cobalt/nickel transport protein
D THC_0751 cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D THC_0677 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D THC_0679 cobalt ABC transporter permease K02008 cbiQ; cobalt/nickel transport system permease protein
D THC_0748 cobalt ABC transporter ATPase K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D THC_0680 cobalt ABC transporter ATPase K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D THC_0886 hypothetical protein K10094 cbiK; nickel transport protein
D THC_0676 membrane protein K10094 cbiK; nickel transport protein
D THC_0678 hypothetical protein K16915 cbiL; nickel transport protein
D THC_0060 biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component
D THC_0492 ABC transporter K09808 lolC_E; lipoprotein-releasing system permease protein
D THC_0576 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D THC_0493 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D THC_0577 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D THC_0659 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D THC_0660 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D THC_0549 ABC transporter K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D THC_0527 hypothetical protein K09812 ftsE; cell division transport system ATP-binding protein
D THC_0017 hypothetical protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:cthi03070]
D THC_0701 hypothetical protein K12340 tolC; outer membrane protein
D THC_0101 hypothetical protein K12340 tolC; outer membrane protein
D THC_1578 preprotein translocase subunit SecF K12257 secDF; SecD/SecF fusion protein
D THC_0122 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D THC_0818 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D THC_1698 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D THC_1772 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D THC_1806 preprotein translocase subunit YajC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D THC_1284 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D THC_1065 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D THC_1026 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D THC_0452 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D THC_0864 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D THC_0863 hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC
D THC_0202 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D THC_0453 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cthi02020]
D THC_0938 hypothetical protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D THC_0483 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D THC_0932 protein sphX K02040 pstS; phosphate transport system substrate-binding protein
D THC_1044 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D THC_1080 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D THC_0661 flagellin K02406 fliC; flagellin
D THC_0358 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D THC_0309 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D THC_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D THC_1316 hypothetical protein K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D THC_0464 nitrogen regulatory protein P-II 1 K04751 glnB; nitrogen regulatory protein P-II 1
D THC_1365 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D THC_1363 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D THC_1781 hypothetical protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D THC_1417 Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D THC_1362 Fis family transcriptional regulator K02584 nifA; Nif-specific regulatory protein
D THC_1364 ATPase AAA K02584 nifA; Nif-specific regulatory protein
D THC_1717 hypothetical protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D THC_0882 Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D THC_0372 Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D THC_1373 hypothetical protein K07714 atoC; two-component system, NtrC family, response regulator AtoC
D THC_1497 chemotaxis protein CheY K07714 atoC; two-component system, NtrC family, response regulator AtoC
D THC_0005 acetoacetate metabolism regulatory protein AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC
D THC_0548 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D THC_1656 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D THC_1657 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA
D THC_1361 Ni/Fe hydrogenase K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D THC_1360 hydrogenase 2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D THC_1359 hydrogenase K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D THC_0366 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D THC_0418 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D THC_0870 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D THC_1587 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THC_0413 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D THC_0422 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THC_0632 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D THC_0555 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D THC_0421 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D THC_0416 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D THC_0557 ATPase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D THC_0359 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D THC_0364 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D THC_0414 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D THC_0417 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D THC_0365 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D THC_0420 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D THC_0780 hypothetical protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D THC_0904 sensory box histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D THC_1328 PAS/PAC sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D THC_1324 Fe-S-cluster-containing hydrogenase subunit K08358 ttrB; tetrathionate reductase subunit B
D THC_0190 hypothetical protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D THC_0520 hypothetical protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D THC_1504 cytochrome C552 K08738 CYC; cytochrome c
D THC_0974 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D THC_0975 cytochrome C oxidase assembly protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D THC_0701 hypothetical protein K12340 tolC; outer membrane protein
D THC_0101 hypothetical protein K12340 tolC; outer membrane protein
D THC_0843 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cthi02024]
D THC_0994 anthranilate synthase subunit I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D THC_0993 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D THC_1469 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D THC_1468 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D THC_1467 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D THC_1466 branched-chain amino acid ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D THC_1465 amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D THC_1132 DeoR faimly transcriptional regulator K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D THC_0508 peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THC_0814 diguanylate cyclase K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THC_0813 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THC_1822 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THC_1806 preprotein translocase subunit YajC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D THC_1578 preprotein translocase subunit SecF K12257 secDF; SecD/SecF fusion protein
D THC_0122 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D THC_0818 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D THC_1698 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D THC_1772 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D THC_1284 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D THC_1065 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D THC_1026 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:cthi02030]
D THC_0870 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D THC_1587 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THC_0413 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D THC_0422 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THC_0632 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D THC_0416 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D THC_0557 ATPase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D THC_0555 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D THC_0421 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D THC_0359 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D THC_0364 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D THC_0414 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D THC_0417 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D THC_1622 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D THC_0365 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D THC_0420 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D THC_0366 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D THC_0418 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D THC_0197 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D THC_0348 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D THC_0349 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D THC_0309 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D THC_0308 hypothetical protein, partial K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:cthi02040]
D THC_0195 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D THC_0196 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D THC_0197 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D THC_0198 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D THC_0199 ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D THC_0200 hypothetical protein K02413 fliJ; flagellar protein FliJ
D THC_1607 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK
D THC_0347 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL
D THC_0348 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D THC_0349 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D THC_0350 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D THC_0351 flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D THC_0352 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D THC_0353 hypothetical protein K02421 fliR; flagellar biosynthesis protein FliR
D THC_0355 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D THC_0354 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D THC_0155 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D THC_0193 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D THC_0194 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D THC_1608 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D THC_1609 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D THC_1610 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D THC_0157 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D THC_0156 flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D THC_0154 flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D THC_0153 flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D THC_0152 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D THC_0150 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D THC_0149 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D THC_0661 flagellin K02406 fliC; flagellin
D THC_1818 hypothetical protein K02407 fliD; flagellar hook-associated protein 2
D THC_1817 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D THC_0309 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D THC_0308 hypothetical protein, partial K02557 motB; chemotaxis protein MotB
D THC_0843 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D THC_0467 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D THC_1635 RNA polymerase sigma70 factor K03086 rpoD; RNA polymerase primary sigma factor
D THC_0190 hypothetical protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D THC_0548 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D THC_0358 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells [PATH:cthi04820]
D THC_0765 ATPase K01539 ATP1A; sodium/potassium-transporting ATPase subunit alpha [EC:7.2.2.13]
D THC_0284 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cthi01501]
D THC_0045 hypothetical protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D THC_1168 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D THC_0701 hypothetical protein K12340 tolC; outer membrane protein
D THC_0101 hypothetical protein K12340 tolC; outer membrane protein
D THC_1128 hypothetical protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D THC_0292 hypothetical protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cthi01502]
D THC_0692 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D THC_0865 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D THC_0791 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D THC_0790 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D THC_0788 hypothetical protein K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cthi01503]
D THC_0960 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D THC_1080 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D THC_0701 hypothetical protein K12340 tolC; outer membrane protein
D THC_0101 hypothetical protein K12340 tolC; outer membrane protein
D THC_1537 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cthi01000]
C 01001 Protein kinases [BR:cthi01001]
D THC_0938 hypothetical protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D THC_1316 hypothetical protein K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D THC_1781 hypothetical protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D THC_1717 hypothetical protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D THC_0881 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D THC_1498 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D THC_0656 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D THC_0416 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D THC_0557 ATPase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D THC_0780 hypothetical protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D THC_0904 sensory box histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D THC_1328 PAS/PAC sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cthi01009]
D THC_0400 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D THC_1161 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 01002 Peptidases and inhibitors [BR:cthi01002]
D THC_1602 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D THC_0268 peptidase A24 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D THC_0952 hydrogenase expression/formation protein K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D THC_0827 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D THC_0411 hypothetical protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D THC_1104 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D THC_0537 glutamine amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D THC_1557 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D THC_1187 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D THC_1199 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D THC_1287 peptidase K26818 pfpI; archaeal arginyl aminopeptidase [EC:3.4.11.27]
D THC_1087 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D THC_1054 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D THC_1575 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D THC_1700 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D THC_1162 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D THC_0435 cell division protein FtsH, partial K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D THC_1505 hypothetical protein K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D THC_0016 protease htpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D THC_0816 zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D THC_1080 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D THC_1424 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D THC_1014 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D THC_1251 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D THC_0495 peptidase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D THC_1253 peptidase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D THC_0399 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D THC_0834 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D THC_0047 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D THC_1649 peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D THC_0345 peptidase S54 K07059 K07059; rhomboid family protein
D THC_1508 hypothetical protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D THC_0925 peptidase K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D THC_0285 hypothetical protein K03592 pmbA; PmbA protein
D THC_1105 peptidase U62 K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:cthi01003]
D THC_1220 glycosyl transferase family 1 K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D THC_0489 peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D THC_1128 hypothetical protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D THC_1193 glucosyltransferase K17250 pglI; GalNAc5-diNAcBac-PP-undecaprenol beta-1,3-glucosyltransferase [EC:2.4.1.293]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cthi01005]
D THC_1537 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D THC_1540 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D THC_1086 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D THC_1098 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D THC_1538 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D THC_1458 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D THC_0425 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D THC_0228 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D THC_0036 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D THC_0229 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D THC_0239 arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D THC_0283 carbohydrate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D THC_0842 rfaE bifunctional protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D THC_0158 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D THC_0510 hypothetical protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D THC_1551 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D THC_1415 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D THC_0159 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D THC_0043 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cthi01011]
D THC_1661 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D THC_0786 hypothetical protein K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D THC_0787 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D THC_0789 UDP-N-acetylmuramoylalanine ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D THC_0792 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D THC_0692 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D THC_0865 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D THC_1409 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D THC_1508 hypothetical protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D THC_0790 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D THC_0788 hypothetical protein K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D THC_1664 UDP-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D THC_1040 virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D THC_1209 virulence factor MVIN family protein K03980 murJ; putative peptidoglycan lipid II flippase
D THC_1128 hypothetical protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D THC_0292 hypothetical protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D THC_1424 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D THC_1014 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D THC_0489 peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D THC_1087 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D THC_0411 hypothetical protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D THC_0021 membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D THC_1512 hypothetical protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D THC_1787 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D THC_1019 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D THC_0960 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cthi01004]
D THC_1737 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D THC_0762 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D THC_0263 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D THC_0500 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D THC_1536 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D THC_0109 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D THC_0761 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D THC_0439 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D THC_0992 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:cthi01006]
D THC_0583 hypothetical protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D THC_1613 hypothetical protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D THC_0689 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D THC_0942 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D THC_0940 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:cthi01007]
D THC_0038 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D THC_0672 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D THC_0039 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D THC_1088 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D THC_1590 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D THC_0320 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D THC_1151 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D THC_1601 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D THC_0642 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D THC_1544 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D THC_0575 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D THC_1803 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D THC_0995 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D THC_0069 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D THC_0068 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D THC_1520 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D THC_1099 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D THC_0722 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D THC_1584 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D THC_1400 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D THC_1399 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D THC_1748 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THC_1774 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D THC_0626 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D THC_0989 diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D THC_0165 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D THC_1463 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D THC_1244 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D THC_0839 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D THC_1604 hypothetical protein K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D THC_1510 aminotransferase DegT K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:cthi00194]
D THC_0521 hypothetical protein K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D THC_0086 cytochrome C K08906 petJ; cytochrome c6
D THC_0300 ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D THC_0514 hypothetical protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D THC_0299 ATP F0F1 synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D THC_0513 ATP synthase F0F1 subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D THC_0298 ATP F0F1 synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D THC_0519 ATP synthase F1 gammsubunit A K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D THC_0297 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D THC_0518 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D THC_0296 ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D THC_0517 hypothetical protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D THC_0295 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D THC_0294 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D THC_0516 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D THC_1354 ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D THC_0515 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D THC_1353 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D THC_1351 hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cthi03000]
D THC_1011 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D THC_0852 Fur family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D THC_1667 transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D THC_1385 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D THC_0273 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D THC_1798 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D THC_0190 hypothetical protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D THC_1362 Fis family transcriptional regulator K02584 nifA; Nif-specific regulatory protein
D THC_1364 ATPase AAA K02584 nifA; Nif-specific regulatory protein
D THC_1794 ModE family transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D THC_0278 hypothetical protein K01926 rex; redox-sensing transcriptional repressor
D THC_1776 nickel-responsive regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D THC_0782 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D THC_1513 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D THC_0675 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D THC_0945 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D THC_0888 bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D THC_0181 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
D THC_0586 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D THC_0796 MraZ family transcriptional regulator K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cthi03021]
D THC_1705 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D THC_0128 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D THC_0129 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D THC_0184 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D THC_0467 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D THC_1635 RNA polymerase sigma70 factor K03086 rpoD; RNA polymerase primary sigma factor
D THC_0389 RNA polymerase sigma70 K03089 rpoH; RNA polymerase sigma-32 factor
D THC_0548 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D THC_0358 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D THC_0138 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D THC_0541 nitrogen utilization protein B K03625 nusB; transcription antitermination protein NusB
D THC_0123 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D THC_0181 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
D THC_1542 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D THC_1256 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cthi03019]
D THC_0160 ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D THC_1020 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D THC_1479 ribonuclease K18682 rny; ribonucrease Y [EC:3.1.-.-]
D THC_1778 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D THC_1332 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D THC_0284 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D THC_0162 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D THC_1256 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D THC_1161 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D THC_0314 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D THC_0146 molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D THC_0462 hypothetical protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D THC_1474 polynucleotide adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D THC_0546 UPF0042 nucleotide-binding protein TOPB45_1388 K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:cthi03011]
D THC_1648 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D THC_0685 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D THC_1685 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D THC_1704 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D THC_1695 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D THC_0872 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D THC_1675 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D THC_1692 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D THC_1745 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D THC_1678 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D THC_1703 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D THC_1674 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D THC_1702 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D THC_0130 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D THC_0806 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D THC_1688 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D THC_0873 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D THC_1683 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D THC_1158 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D THC_1632 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D THC_0125 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D THC_1682 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D THC_1679 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D THC_1680 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D THC_1691 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D THC_1693 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D THC_0874 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D THC_0126 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D THC_0124 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D THC_0127 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D THC_1744 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D THC_1689 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D THC_1697 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D THC_1686 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D THC_1706 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D THC_1694 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D THC_0261 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D THC_1401 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D THC_0683 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D THC_1684 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D THC_1681 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D THC_1690 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D THC_0684 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D THC_0579 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D THC_1687 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D THC_1696 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D THC_1070 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D THC_0760 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D THC_0120 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D THC_1809 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D THC_1402 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D THC_0824 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D THC_1127 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D THC_1120 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D THC_1124 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cthi03009]
D THC_1020 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D THC_1094 GTPase Era K03595 era; GTPase
D THC_0902 GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D THC_0181 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
D THC_0138 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D THC_0541 nitrogen utilization protein B K03625 nusB; transcription antitermination protein NusB
D THC_0123 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D THC_1782 RNA-binding protein S4 K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D THC_1788 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D THC_1471 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D THC_1171 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D THC_0107 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D THC_0795 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D THC_0899 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D THC_0965 RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D THC_0339 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D THC_0396 rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D THC_1404 50S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D THC_1269 50S rRNA methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D THC_0742 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D THC_0801 50S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D THC_1345 hypothetical protein K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D THC_0051 RNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D THC_0317 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D THC_1134 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D THC_0545 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D THC_0808 hypothetical protein K02860 rimM; 16S rRNA processing protein RimM
D THC_0928 hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D THC_0797 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D THC_0134 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D THC_1506 ribosomal protein L11 methylase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D THC_0160 ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D THC_1332 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D THC_0307 ribosome-associated GTPase EngA K03977 engA; GTPase
D THC_0534 GTP-binding protein HflX K03665 hflX; GTPase
D THC_0857 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D THC_0580 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D THC_0033 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D THC_0137 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP
D THC_0535 hypothetical protein K09710 ybeB; ribosome-associated protein
D THC_0547 glyceraldehyde-3-phosphate dehydrogenase K05808 hpf; ribosome hibernation promoting factor
D THC_0890 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D THC_0759 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cthi03016]
D THC_1647 hypothetical protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D THC_0235 tRNA-splicing ligase K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D THC_0305 hypothetical protein K24956 ZBTB8OS; protein archease
D THC_0038 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D THC_1099 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D THC_1601 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D THC_1544 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D THC_1151 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D THC_0320 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D THC_0575 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D THC_1803 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D THC_1584 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D THC_0722 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D THC_1520 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D THC_1088 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D THC_1590 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D THC_0642 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D THC_0995 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D THC_1400 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D THC_1399 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D THC_0672 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D THC_0039 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D THC_1742 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D THC_1153 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D THC_1420 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D THC_1747 pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D THC_0031 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D THC_0511 tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D THC_1533 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D THC_1167 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D THC_0857 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D THC_0942 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D THC_1804 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D THC_0461 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D THC_1500 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D THC_1808 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D THC_1546 hypothetical protein K09006 K09006; RNA-free ribonuclease P [EC:3.1.26.5]
D THC_0428 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D THC_0978 hypothetical protein K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D THC_0506 hypothetical protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D THC_0466 hypothetical protein K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D THC_0069 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D THC_0068 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D THC_0233 adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D THC_1708 dimethylallyladenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D THC_1483 hypothetical protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D THC_1346 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D THC_1771 tRNA (uracil-5-)-methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D THC_0809 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D THC_0054 RNA methyltransferase K22446 K22446; tRNA (cytosine49-C5)-methyltransferase [EC:2.1.1.-]
D THC_0148 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D THC_0804 hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D THC_0836 hypothetical protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15]
D THC_0424 potassium ABC transporter ATPase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D THC_1429 SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D THC_1534 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D THC_1518 S-adenosylmethionine tRNA ribosyltransferase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D THC_0850 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D THC_0385 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D THC_0386 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D THC_1165 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D THC_1285 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D THC_1773 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D THC_0436 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D THC_0815 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D THC_1416 tRNA threonylcarbamoyladenosine modification protein TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D THC_1055 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D THC_1778 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D THC_0162 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cthi03012]
D THC_0035 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D THC_0721 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D THC_0686 elongation factor Ts K02357 tsf; elongation factor Ts
D THC_0119 elongation factor Tu K02358 tuf; elongation factor Tu
D THC_1677 elongation factor Tu K02358 tuf; elongation factor Tu
D THC_1502 elongation factor G K02355 fusA; elongation factor G
D THC_1676 elongation factor G K02355 fusA; elongation factor G
D THC_0067 translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D THC_1069 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D THC_0688 ribosome recycling factor K02838 frr; ribosome recycling factor
D THC_1662 hypothetical protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D THC_0825 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D THC_1701 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D THC_1143 elongation factor P K02356 efp; elongation factor P
D THC_1222 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:cthi03110]
D THC_1580 protein disaggregation chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D THC_1252 ATP-dependent protease K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D THC_1614 ATPase K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D THC_0926 ATP-dependent protease K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D THC_0314 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D THC_0146 molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D THC_0183 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D THC_0556 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D THC_0531 integrase K05516 cbpA; curved DNA-binding protein
D THC_1000 heat shock protein Hsp33 K04083 hslO; molecular chaperone Hsp33
D THC_0313 co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D THC_1581 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D THC_0145 molecular chaperone GroES K04078 groES; chaperonin GroES
D THC_1080 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D THC_1162 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D THC_0435 cell division protein FtsH, partial K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D THC_0515 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D THC_1353 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D THC_0954 hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D THC_0477 molecular chaperone TorD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D THC_1792 hypothetical protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D THC_1821 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D THC_1078 hypothetical protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D THC_1081 hypothetical protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D THC_1280 thioredoxin K03671 TXN; thioredoxin
D THC_1596 thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
C 04131 Membrane trafficking [BR:cthi04131]
D THC_1583 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D THC_0542 nitrogen utilization protein B K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D THC_0544 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
C 04121 Ubiquitin system [BR:cthi04121]
C 03051 Proteasome
C 03032 DNA replication proteins [BR:cthi03032]
D THC_1734 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D THC_0378 ATPase AAA K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D THC_0205 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D THC_1398 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D THC_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D THC_0875 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D THC_1634 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D THC_0969 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D THC_0905 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D THC_1444 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D THC_1660 hypothetical protein, partial K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D THC_1490 DNA polymerase III subunit gamma/tau, partial K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D THC_0260 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D THC_1783 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D THC_0040 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D THC_1410 restriction endonuclease K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D THC_0991 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D THC_1443 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D THC_0071 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D THC_1336 reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-]
C 03036 Chromosome and associated proteins [BR:cthi03036]
D THC_1020 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D THC_0205 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D THC_1398 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D THC_0531 integrase K05516 cbpA; curved DNA-binding protein
D THC_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D THC_0644 hypothetical protein K03529 smc; chromosome segregation protein
D THC_0719 hypothetical protein K06024 scpB; segregation and condensation protein B
D THC_0784 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D THC_0527 hypothetical protein K09812 ftsE; cell division transport system ATP-binding protein
D THC_1751 primosome, DnaD subunit K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D THC_0785 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D THC_0783 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D THC_1481 hypothetical protein K09892 zapB; cell division protein ZapB
D THC_0960 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D THC_0986 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D THC_0290 hypothetical protein K03570 mreC; rod shape-determining protein MreC
D THC_0293 hypothetical protein K05837 rodA; rod shape determining protein RodA
D THC_0412 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D THC_0939 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D THC_0782 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D THC_1513 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D THC_0675 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D THC_0461 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D THC_1771 tRNA (uracil-5-)-methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D THC_0574 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D THC_1646 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D THC_1407 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D THC_0737 chromosome partitioning protein ParA K03593 mrp; ATP-binding protein involved in chromosome partitioning
D THC_0982 ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:cthi03400]
D THC_0770 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D THC_0329 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D THC_0277 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D THC_1625 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D THC_1135 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D THC_0269 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D THC_1053 deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D THC_1569 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D THC_0040 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D THC_1783 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D THC_0180 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D THC_1427 hypothetical protein K03701 uvrA; excinuclease ABC subunit A
D THC_1472 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D THC_0651 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D THC_0468 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D THC_0381 DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D THC_0407 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D THC_0128 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D THC_0129 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D THC_1705 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D THC_0184 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D THC_0405 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D THC_0961 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D THC_1633 hypothetical protein K07456 mutS2; DNA mismatch repair protein MutS2
D THC_0943 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D THC_0585 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D THC_0584 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D THC_0905 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D THC_1444 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D THC_1660 hypothetical protein, partial K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D THC_1490 DNA polymerase III subunit gamma/tau, partial K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D THC_0969 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D THC_1410 restriction endonuclease K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D THC_0282 recombinase RecA K03553 recA; recombination protein RecA
D THC_0522 hypothetical protein K03550 ruvA; holliday junction DNA helicase RuvA
D THC_1524 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D THC_0523 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D THC_0844 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D THC_1024 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50
D THC_1405 hypothetical protein K03547 sbcD; DNA repair protein SbcD/Mre11
D THC_1211 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D THC_0332 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D THC_1082 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O)
D THC_1488 recombinase RecR K06187 recR; recombination protein RecR
D THC_0803 hypothetical protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D THC_1611 hypothetical protein K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D THC_0841 hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D THC_0991 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D THC_1443 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D THC_0071 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D THC_0205 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D THC_1398 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D THC_0398 hypothetical protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D THC_0399 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D THC_1425 DNA polymerase III K02347 polX; DNA polymerase (family X)
D THC_0257 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D THC_0032 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:cthi03029]
D THC_0520 hypothetical protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D THC_0035 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D THC_0721 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D THC_0686 elongation factor Ts K02357 tsf; elongation factor Ts
D THC_0119 elongation factor Tu K02358 tuf; elongation factor Tu
D THC_1677 elongation factor Tu K02358 tuf; elongation factor Tu
D THC_1502 elongation factor G K02355 fusA; elongation factor G
D THC_1676 elongation factor G K02355 fusA; elongation factor G
D THC_1094 GTPase Era K03595 era; GTPase
D THC_0672 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D THC_1544 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D THC_1803 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D THC_0320 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D THC_1514 glutamyl-tRNA(Gln) amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D THC_0280 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D THC_1515 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D THC_0378 ATPase AAA K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D THC_0969 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D THC_0578 hypothetical protein K07277 SAM50; outer membrane protein insertion porin family
D THC_0314 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D THC_0313 co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D THC_0146 molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D THC_0145 molecular chaperone GroES K04078 groES; chaperonin GroES
D THC_0183 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D THC_0556 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D THC_1533 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D THC_1167 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D THC_1407 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D THC_0737 chromosome partitioning protein ParA K03593 mrp; ATP-binding protein involved in chromosome partitioning
D THC_1806 preprotein translocase subunit YajC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cthi02000]
D THC_0017 hypothetical protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D THC_1797 ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D THC_1796 ABC transporter permease K02018 modB; molybdate transport system permease protein
D THC_1795 ABC transporter K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D THC_0189 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D THC_0187 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D THC_0188 ABC transporter K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D THC_0932 protein sphX K02040 pstS; phosphate transport system substrate-binding protein
D THC_1044 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D THC_0933 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D THC_1043 phosphate ABC transporter permease PstC K02037 pstC; phosphate transport system permease protein
D THC_0934 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D THC_1042 phosphate transporter permease subunit PtsA K02038 pstA; phosphate transport system permease protein
D THC_0935 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D THC_1041 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D THC_1469 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D THC_1468 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D THC_1467 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D THC_1466 branched-chain amino acid ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D THC_1465 amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D THC_0508 peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THC_0814 diguanylate cyclase K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THC_0813 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THC_1822 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THC_0609 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D THC_0614 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D THC_0610 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D THC_0615 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D THC_0611 iron ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D THC_0616 ABC transporter K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D THC_1577 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein
D THC_0560 hypothetical protein K09816 znuB; zinc transport system permease protein
D THC_0561 ABC transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D THC_0750 hypothetical protein K02009 cbiN; cobalt/nickel transport protein
D THC_0679 cobalt ABC transporter permease K02008 cbiQ; cobalt/nickel transport system permease protein
D THC_0751 cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D THC_0677 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D THC_0748 cobalt ABC transporter ATPase K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D THC_0680 cobalt ABC transporter ATPase K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D THC_0886 hypothetical protein K10094 cbiK; nickel transport protein
D THC_0676 membrane protein K10094 cbiK; nickel transport protein
D THC_0678 hypothetical protein K16915 cbiL; nickel transport protein
D THC_0060 biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component
D THC_0659 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D THC_0660 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D THC_0549 ABC transporter K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D THC_0492 ABC transporter K09808 lolC_E; lipoprotein-releasing system permease protein
D THC_0576 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D THC_0493 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D THC_0577 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D THC_0527 hypothetical protein K09812 ftsE; cell division transport system ATP-binding protein
D THC_0832 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D THC_0649 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D THC_0831 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D THC_0650 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D THC_0697 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D THC_0698 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D THC_0699 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D THC_0163 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D THC_0927 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D THC_0045 hypothetical protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D THC_1049 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D THC_1709 potassium transporter TrkA K10716 kch; voltage-gated potassium channel
D THC_0465 ammonia channel protein K03320 amt; ammonium transporter, Amt family
D THC_1366 ammonia channel protein K03320 amt; ammonium transporter, Amt family
D THC_1118 mechanosensitive ion channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D THC_0309 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D THC_0308 hypothetical protein, partial K02557 motB; chemotaxis protein MotB
D THC_0621 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB
D THC_0622 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D THC_1279 hypothetical protein K03562 tolQ; biopolymer transport protein TolQ
D THC_0170 biopolymer transporter TolR K03560 tolR; biopolymer transport protein TolR
D THC_1665 magnesium transporter K03284 corA; magnesium transporter
D THC_1063 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D THC_0392 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D THC_0393 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D THC_0604 tonB-denpendent receptor K16092 btuB; vitamin B12 transporter
D THC_1655 hypothetical protein K16092 btuB; vitamin B12 transporter
D THC_0613 tonB-denpendent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D THC_0701 hypothetical protein K12340 tolC; outer membrane protein
D THC_0101 hypothetical protein K12340 tolC; outer membrane protein
D THC_0096 porin K07267 oprB; porin
D THC_0578 hypothetical protein K07277 SAM50; outer membrane protein insertion porin family
D THC_1282 hypothetical protein K05807 bamD; outer membrane protein assembly factor BamD
D THC_0550 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D THC_1007 hypothetical protein K04744 lptD; LPS-assembly protein
D THC_0042 hypothetical protein K06189 corC; hemolysin (HlyC) family protein
D THC_0681 dihydroorotate dehydrogenase K07238 TC.ZIP; zinc transporter, ZIP family
D THC_0480 hypothetical protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D THC_1092 cation transporter K07301 yrbG; cation:H+ antiporter
D THC_0470 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter
D THC_1045 sodium/hydrogen exchanger K26735 KEA4_5_6; K+:H+ antiporter
D THC_1386 arsenic resistance protein ArsB K03325 ACR3; arsenite transporter
D THC_1516 arsenite transporter K03325 ACR3; arsenite transporter
D THC_0909 monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D THC_0911 monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D THC_1040 virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D THC_1209 virulence factor MVIN family protein K03980 murJ; putative peptidoglycan lipid II flippase
D THC_1391 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D THC_0029 hypothetical protein K05595 marC; multiple antibiotic resistance protein
D THC_0623 hypothetical protein K03832 tonB; periplasmic protein TonB
D THC_1058 hypothetical protein K03640 pal; peptidoglycan-associated lipoprotein
D THC_0169 hypothetical protein K03646 tolA; colicin import membrane protein
D THC_1671 hypothetical protein K03641 tolB; TolB protein
D THC_0474 molybdopterin oxidoreductase K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D THC_0475 4Fe-4S ferredoxin K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit
D THC_0476 molybdopterin oxidoreductase K00185 dmsC; dimethyl sulfoxide reductase membrane subunit
D THC_0921 thiosulfate reductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D THC_1324 Fe-S-cluster-containing hydrogenase subunit K08358 ttrB; tetrathionate reductase subunit B
D THC_1050 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D THC_0092 iron transporter FeoA K04758 feoA; ferrous iron transport protein A
D THC_0094 iron transporter FeoA K04758 feoA; ferrous iron transport protein A
D THC_1010 hypothetical protein K04758 feoA; ferrous iron transport protein A
D THC_1009 iron transporter FeoB K04759 feoB; ferrous iron transport protein B
D THC_0095 iron transporter K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:cthi02044]
D THC_0701 hypothetical protein K12340 tolC; outer membrane protein
D THC_0101 hypothetical protein K12340 tolC; outer membrane protein
D THC_0268 peptidase A24 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D THC_1656 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D THC_1657 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA
D THC_1719 secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D THC_1652 pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D THC_1718 pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D THC_0444 hypothetical protein K02662 pilM; type IV pilus assembly protein PilM
D THC_0443 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D THC_0442 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D THC_0440 hypothetical protein K02666 pilQ; type IV pilus assembly protein PilQ
D THC_0847 twitching motility protein K02669 pilT; twitching motility protein PilT
D THC_0848 twitching motility protein K02669 pilT; twitching motility protein PilT
D THC_1728 fimbrial protein K02674 pilY1; type IV pilus assembly protein PilY1
D THC_1729 hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D THC_1721 hypothetical protein K12282 mshL; MSHA biogenesis protein MshL
D THC_1725 ATPase AAA K12283 mshM; MSHA biogenesis protein MshM
D THC_0057 hypothetical protein K02221 yggT; YggT family protein
D THC_0324 hypothetical protein K02237 comEA; competence protein ComEA
D THC_0003 CMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D THC_0304 hypothetical protein K02238 comEC; competence protein ComEC
D THC_0355 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D THC_0354 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D THC_0173 hypothetical protein K04061 flhB2; flagellar biosynthesis protein
D THC_0196 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D THC_0198 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D THC_0199 ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D THC_0349 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D THC_0350 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D THC_0351 flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D THC_0352 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D THC_0353 hypothetical protein K02421 fliR; flagellar biosynthesis protein FliR
D THC_1596 thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D THC_1284 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D THC_1578 preprotein translocase subunit SecF K12257 secDF; SecD/SecF fusion protein
D THC_0122 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D THC_0818 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D THC_1698 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D THC_1026 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D THC_1065 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D THC_1772 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D THC_1806 preprotein translocase subunit YajC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D THC_0452 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D THC_0864 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D THC_0863 hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC
D THC_0202 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D THC_0453 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:cthi02042]
D THC_0392 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D THC_0393 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:cthi02022]
D THC_0938 hypothetical protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D THC_1316 hypothetical protein K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D THC_0769 LytR family transcriptional regulator K02477 K02477; two-component system, LytTR family, response regulator
D THC_1781 hypothetical protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D THC_1417 Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D THC_1717 hypothetical protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D THC_0882 Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D THC_0372 Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D THC_1373 hypothetical protein K07714 atoC; two-component system, NtrC family, response regulator AtoC
D THC_1497 chemotaxis protein CheY K07714 atoC; two-component system, NtrC family, response regulator AtoC
D THC_0005 acetoacetate metabolism regulatory protein AtoC K07714 atoC; two-component system, NtrC family, response regulator AtoC
D THC_0881 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D THC_1498 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D THC_0656 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D THC_0416 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D THC_0557 ATPase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D THC_0359 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D THC_0364 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D THC_0414 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D THC_0417 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D THC_0365 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D THC_0420 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D THC_0780 hypothetical protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D THC_0904 sensory box histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D THC_1328 PAS/PAC sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:cthi02035]
D THC_0416 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D THC_0557 ATPase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D THC_0555 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D THC_0421 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D THC_1622 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D THC_0366 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D THC_0418 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D THC_0365 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D THC_0420 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D THC_0359 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D THC_0364 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D THC_0414 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D THC_0417 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D THC_0870 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D THC_1587 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THC_0413 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D THC_0422 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THC_0632 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D THC_0198 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D THC_0199 ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D THC_0200 hypothetical protein K02413 fliJ; flagellar protein FliJ
D THC_0350 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D THC_0351 flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D THC_0352 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D THC_0353 hypothetical protein K02421 fliR; flagellar biosynthesis protein FliR
D THC_0355 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D THC_0354 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D THC_0197 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D THC_0348 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D THC_0349 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D THC_0196 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D THC_0153 flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D THC_0155 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D THC_0154 flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D THC_0347 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL
D THC_0195 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D THC_1607 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK
D THC_0193 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D THC_0194 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D THC_1608 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D THC_0157 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D THC_0156 flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D THC_0152 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D THC_1609 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D THC_1610 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D THC_0150 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D THC_0149 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D THC_0661 flagellin K02406 fliC; flagellin
D THC_1818 hypothetical protein K02407 fliD; flagellar hook-associated protein 2
D THC_1817 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D THC_0358 RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D THC_0309 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D THC_0308 hypothetical protein, partial K02557 motB; chemotaxis protein MotB
D THC_0190 hypothetical protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D THC_0843 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D THC_0738 flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D THC_1819 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG
D THC_0356 hypothetical protein K02404 flhF; flagellar biosynthesis protein FlhF
D THC_0357 flagellar synthesis regulator FleN K04562 flhG; flagellar biosynthesis protein FlhG
D THC_0847 twitching motility protein K02669 pilT; twitching motility protein PilT
D THC_0848 twitching motility protein K02669 pilT; twitching motility protein PilT
D THC_1656 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D THC_1657 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA
D THC_1719 secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D THC_1652 pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D THC_1718 pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D THC_0268 peptidase A24 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D THC_0440 hypothetical protein K02666 pilQ; type IV pilus assembly protein PilQ
D THC_0442 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D THC_0443 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D THC_0444 hypothetical protein K02662 pilM; type IV pilus assembly protein PilM
D THC_1728 fimbrial protein K02674 pilY1; type IV pilus assembly protein PilY1
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cthi04812]
D THC_0781 hypothetical protein K06990 MEMO1; MEMO1 family protein
D THC_0037 hypothetical protein K06990 MEMO1; MEMO1 family protein
D THC_0986 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D THC_0783 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D THC_0784 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D THC_0412 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D THC_0939 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D THC_0782 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D THC_1513 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D THC_0675 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cthi04147]
D THC_0284 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D THC_0542 nitrogen utilization protein B K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D THC_0544 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D THC_1293 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D THC_0146 molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D THC_0314 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D THC_1017 phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D THC_1651 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D THC_0119 elongation factor Tu K02358 tuf; elongation factor Tu
D THC_1677 elongation factor Tu K02358 tuf; elongation factor Tu
D THC_0765 ATPase K01539 ATP1A; sodium/potassium-transporting ATPase subunit alpha [EC:7.2.2.13]
D THC_1153 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D THC_0400 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D THC_1064 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D THC_1699 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D THC_0869 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D THC_1216 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D THC_1363 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D THC_1018 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D THC_1752 formate--tetrahydrofolate ligase K00288 MTHFD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase / formyltetrahydrofolate synthetase [EC:1.5.1.5 3.5.4.9 6.3.4.3]
D THC_0483 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D THC_0800 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D THC_1541 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D THC_1505 hypothetical protein K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D THC_0447 electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D THC_0636 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D THC_1294 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:cthi02048]
D THC_0732 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D THC_1410 restriction endonuclease K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D THC_1491 DNA methylase N-4 K24451 zim; modification methylase
D THC_0379 hypothetical protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D THC_0380 hypothetical protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D THC_0783 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D THC_0986 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D THC_0038 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D THC_1533 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D THC_1167 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:cthi01504]
D THC_0701 hypothetical protein K12340 tolC; outer membrane protein
D THC_0101 hypothetical protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cthi00537]
D THC_0483 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cthi03100]
D THC_1338 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D THC_1157 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D THC_1123 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D THC_1076 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D THC_0482 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D THC_1240 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D THC_1257 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D THC_1413 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D THC_0384 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D THC_1629 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D THC_1052 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D THC_0829 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D THC_0951 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D THC_1770 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D THC_0012 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D THC_0116 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D THC_1628 tRNA-His K14226 tRNA-His; tRNA His
D THC_1122 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D THC_0633 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D THC_0819 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D THC_0136 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D THC_0250 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D THC_1038 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D THC_0828 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D THC_1141 tRNA-Met K14230 tRNA-Met; tRNA Met
D THC_0854 tRNA-Met K14230 tRNA-Met; tRNA Met
D THC_0383 tRNA-Met K14230 tRNA-Met; tRNA Met
D THC_1348 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D THC_0065 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D THC_0423 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D THC_1174 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D THC_1066 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D THC_1630 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D THC_0624 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D THC_0131 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D THC_1631 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D THC_0118 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D THC_0121 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D THC_0115 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D THC_0723 tRNA-Val K14237 tRNA-Val; tRNA Val
D THC_1239 tRNA-Val K14237 tRNA-Val; tRNA Val
D THC_0871 tRNA-Val K14237 tRNA-Val; tRNA Val
D THC_1032 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D THC_1120 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D THC_1124 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D THC_1127 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D THC_1259 indolepyruvate ferredoxin oxidoreductase K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D THC_1267 indolepyruvate oxidoreductase subunit beta K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D THC_0637 FAD dependent oxidoreductase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D THC_1288 lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D THC_1396 desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2]
D THC_1231 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D THC_0956 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D THC_1522 ribonucleoside-triphosphate reductase K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D THC_0802 radical SAM protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D THC_1119 pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D THC_1643 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D THC_0049 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D THC_1198 carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D THC_0041 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D THC_1452 transglutaminase K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D THC_1142 hypothetical protein K07057 bpsA; N4-bis(aminopropyl)spermidine synthase [EC:2.5.1.128]
D THC_0330 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D THC_0433 membrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D THC_0112 CDP-alcohol phosphatidyltransferase K17884 E2.7.8.39; archaetidylinositol phosphate synthase [EC:2.7.8.39]
D THC_0746 appr-1-p processing protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D THC_0889 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D THC_0024 phosphoesterase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D THC_1022 chemotaxis protein CheY K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D THC_0559 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D THC_1519 hypothetical protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D THC_1477 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D THC_1449 ATPase AAA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D THC_0805 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D THC_0266 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D THC_0657 UDP-N-acetylmuramate K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D THC_0499 RNA 3'-phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4]
D THC_0498 hypothetical protein K07468 K07468; DNA/RNA ligase [EC:6.5.1.-]
D THC_1093 ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
C 99981 Carbohydrate metabolism
D THC_0747 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D THC_0178 signal transduction protein K04767 acuB; acetoin utilization protein AcuB
D THC_1334 membrane protein K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D THC_0473 ferredoxin K05337 fer; ferredoxin
D THC_1531 FeS cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D THC_1532 FeS cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D THC_1313 heterodisulfide reductase subunit A K16885 qmoA; quinone-modifying oxidoreductase, subunit QmoA
D THC_1314 heterodisulfide reductase subunit A K16886 qmoB; quinone-modifying oxidoreductase, subunit QmoB
D THC_1315 hypothetical protein K16887 qmoC; quinone-modifying oxidoreductase, subunit QmoC
D THC_1380 nitrate reductase K02573 napG; ferredoxin-type protein NapG
D THC_1381 nitrate reductase K02574 napH; ferredoxin-type protein NapH
D THC_0429 4Fe-4S ferredoxin K02574 napH; ferredoxin-type protein NapH
D THC_0446 electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D THC_0635 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D THC_0638 4Fe-4S ferredoxin K03855 fixX; ferredoxin like protein
D THC_0323 sulfite reductase K23077 dsrC; dissimilatory sulfite reductase related protein
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D THC_0303 pyridoxal phosphate biosynthesis protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D THC_1013 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D THC_0030 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D THC_1459 membrane protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D THC_0014 molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D THC_0570 cold-shock protein K03704 cspA; cold shock protein
D THC_0337 hypothetical protein K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
D THC_0052 beta-lactamase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D THC_1250 trigger factor K03545 tig; trigger factor
D THC_1025 single-stranded DNA-binding protein K03664 smpB; SsrA-binding protein
D THC_1357 hydrogenase assembly protein HupF K04653 hypC; hydrogenase expression/formation protein HypC
D THC_1358 hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D THC_0955 hydrogenase assembly protein HupF K04655 hypE; hydrogenase expression/formation protein HypE
D THC_0953 carbamoyltransferase K04656 hypF; hydrogenase maturation protein HypF
D THC_1355 magnesium chelatase K07391 comM; magnesium chelatase family protein
D THC_0647 hypothetical protein K07399 resB; cytochrome c biogenesis protein
D THC_1624 serine protease K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D THC_0231 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D THC_0382 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D THC_1089 endonuclease K07457 K07457; endonuclease III related protein
D THC_0259 hypothetical protein K07460 yraN; putative endonuclease
D THC_1486 hypothetical protein K04096 smf; DNA processing protein
D THC_0007 ATPase AAA K07478 ycaJ; putative ATPase
D THC_0758 transposase, IS116/IS110/IS902 family K07486 K07486; transposase
D THC_0533 transposase, IS116/IS110/IS902 family K07486 K07486; transposase
D THC_0224 transposase, IS116/IS110/IS902 family K07486 K07486; transposase
D THC_0089 transposase, IS116/IS110/IS902 family K07486 K07486; transposase
D THC_1197 transposase K07493 K07493; putative transposase
D THC_1658 transposase K07493 K07493; putative transposase
D THC_1659 transposase K07493 K07493; putative transposase
C 99979 Viral proteins
C 99998 Others
D THC_1489 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D THC_1566 hypothetical protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
C 99978 Cell growth
D THC_0858 carbon monoxide dehydrogenase K07321 cooC; CO dehydrogenase maturation factor
D THC_0608 ATP-binding protein K07321 cooC; CO dehydrogenase maturation factor
D THC_1591 carbon monoxide dehydrogenase K07321 cooC; CO dehydrogenase maturation factor
D THC_1805 hypothetical protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D THC_0059 phosphate starvation protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D THC_1750 hypothetical protein K03634 lolA; outer membrane lipoprotein carrier protein
D THC_1057 hypothetical protein K06142 hlpA; outer membrane protein
D THC_0700 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
D THC_0491 secretion protein HylD K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D THC_0936 phosphate uptake regulator PhoU K02039 phoU; phosphate transport system protein
D THC_0835 hypothetical protein K02039 phoU; phosphate transport system protein
D THC_1180 dihydroorotate dehydrogenase K03926 cutA; periplasmic divalent cation tolerance protein
D THC_1349 hemerythrin K07216 hr; hemerythrin
B
B 09194 Poorly characterized
C 99996 General function prediction only
D THC_1589 colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D THC_0694 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein
D THC_0325 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily
D THC_0164 hypothetical protein K09014 sufB; Fe-S cluster assembly protein SufB
D THC_0135 hypothetical protein K07058 K07058; membrane protein
C 99997 Function unknown
D THC_0488 hypothetical protein K06871 K06871; uncharacterized protein
D THC_1295 CoA-binding protein K06929 K06929; uncharacterized protein
D THC_0851 Fe-S oxidoreductase K06940 K06940; uncharacterized protein
D THC_0171 hypothetical protein K06940 K06940; uncharacterized protein
D THC_0105 hypothetical protein K06940 K06940; uncharacterized protein
D THC_0691 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein
D THC_0807 RNA-binding protein K06960 K06960; uncharacterized protein
D THC_1218 hypothetical protein K06986 K06986; uncharacterized protein
D THC_1249 cupin K06995 K06995; uncharacterized protein
D THC_0144 aminoglycoside phosphotransferase K07028 K07028; uncharacterized protein
D THC_1175 hypothetical protein K07063 K07063; uncharacterized protein
D THC_0140 NAD-dependent epimerase/dehydratase K07071 K07071; uncharacterized protein
D THC_0219 hypothetical protein K07075 K07075; uncharacterized protein
D THC_1327 permease K07089 K07089; uncharacterized protein
D THC_1387 permease K07089 K07089; uncharacterized protein
D THC_0370 permease K07090 K07090; uncharacterized protein
D THC_0878 membrane protein K07090 K07090; uncharacterized protein
D THC_0924 hypothetical protein K07090 K07090; uncharacterized protein
D THC_1029 membrane protein K07090 K07090; uncharacterized protein
D THC_1229 hypothetical protein K07090 K07090; uncharacterized protein
D THC_1637 membrane protein K07090 K07090; uncharacterized protein
D THC_0923 hypothetical protein K07090 K07090; uncharacterized protein
D THC_1100 phosphodiesterase K07095 K07095; uncharacterized protein
D THC_1008 metallophosphoesterase K07098 K07098; uncharacterized protein
D THC_1428 hypothetical protein K07112 K07112; uncharacterized protein
D THC_1184 ATPase AAA K07133 K07133; uncharacterized protein
D THC_1185 ATPase K07133 K07133; uncharacterized protein
D THC_0695 hypothetical protein K07139 K07139; uncharacterized protein
D THC_0856 hypothetical protein K07164 K07164; uncharacterized protein
D THC_1807 membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D THC_0342 hypothetical protein K08999 K08999; uncharacterized protein
D THC_0588 hypothetical protein K09003 K09003; uncharacterized protein
D THC_0958 hypothetical protein K09004 K09004; uncharacterized protein
D THC_1370 hypothetical protein K09004 K09004; uncharacterized protein
D THC_0448 hypothetical protein K09122 K09122; uncharacterized protein
D THC_0363 hypothetical protein K09126 K09126; uncharacterized protein
D THC_0056 hypothetical protein K09131 K09131; uncharacterized protein
D THC_1062 hypothetical protein K09137 K09137; uncharacterized protein
D THC_1408 hypothetical protein K09138 K09138; uncharacterized protein
D THC_1595 hypothetical protein K09141 K09141; uncharacterized protein
D THC_0208 thiamine biosynthesis protein ApbE K09740 K09740; uncharacterized protein
D THC_0438 hypothetical protein K09749 K09749; uncharacterized protein
D THC_0034 hypothetical protein K09764 K09764; uncharacterized protein
D THC_1147 hypothetical protein K09791 K09791; uncharacterized protein
D THC_0457 hypothetical protein K09794 K09794; uncharacterized protein
D THC_0867 hypothetical protein K09862 K09862; uncharacterized protein
D THC_0729 hypothetical protein K09931 K09931; uncharacterized protein
D THC_1079 hypothetical protein K07502 yprB; uncharacterized protein
D THC_0139 hypothetical protein K07742 ylxR; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 11, 2024