+D GENES KO #

  KEGG Orthology (KO) - Desulfurococcus amylolyticus DSM 16532

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:dfd00010] D Desfe_0578 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Desfe_1128 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D Desfe_0718 Fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Desfe_1349 archaeal fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Desfe_1348 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Desfe_0262 glyceraldehyde 3-phosphate dehydrogenase (NAD(P)+) K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D Desfe_0261 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Desfe_0416 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Desfe_0063 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Desfe_1347 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Desfe_0879 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Desfe_0667 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Desfe_0503 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Desfe_1298 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Desfe_1299 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Desfe_0502 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Desfe_0505 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Desfe_1296 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Desfe_0504 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Desfe_1297 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Desfe_0499 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Desfe_0475 2-oxoglutarate synthase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Desfe_0498 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Desfe_0474 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Desfe_1240 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Desfe_0977 acetyl coenzyme A synthetase (ADP forming), alpha domain protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D Desfe_1051 CoA-binding domain protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D Desfe_1050 ATP-grasp domain protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D Desfe_0782 ATP-grasp domain protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D Desfe_0111 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Desfe_0188 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Desfe_0557 Aldehyde ferredoxin oxidoreductase K11389 gapor; glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) [EC:1.2.7.6] D Desfe_0067 Aldehyde Dehydrogenase K18978 gapN; glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] [EC:1.2.1.90] D Desfe_0003 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:dfd00020] D Desfe_0667 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Desfe_0499 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Desfe_0475 2-oxoglutarate synthase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Desfe_0498 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Desfe_0474 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Desfe_0497 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Desfe_0500 2-oxoglutarate ferredoxin oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Desfe_1155 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Desfe_1156 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Desfe_0880 Carbamoyl-phosphate synthase L chain ATP-binding protein K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D Desfe_0591 Conserved carboxylase region K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Desfe_0003 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Desfe_0503 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Desfe_1298 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Desfe_1299 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Desfe_0502 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Desfe_0505 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Desfe_1296 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Desfe_0504 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Desfe_1297 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:dfd00030] D Desfe_1128 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D Desfe_0594 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Desfe_0020 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Desfe_0079 Orotidine 5'-phosphate decarboxylase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43] D Desfe_0297 6-phospho 3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D Desfe_0673 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Desfe_0968 PfkB domain protein K00852 rbsK; ribokinase [EC:2.7.1.15] D Desfe_0195 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K22199 ppm; phosphopentomutase [EC:5.4.2.7] D Desfe_0111 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Desfe_0188 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Desfe_0717 PfkB domain protein K26208 E2.7.1.239; alpha-D-ribose-1-phosphate 5-kinase (ATP) [EC:2.7.1.239] D Desfe_0599 ribose 1,5-bisphosphate isomerase K18237 K18237; ribose 1,5-bisphosphate isomerase [EC:5.3.1.29] D Desfe_0584 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Desfe_0067 Aldehyde Dehydrogenase K18978 gapN; glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] [EC:1.2.1.90] D Desfe_1214 Carbohydrate kinase, FGGY K25031 gntK; gluconokinase [EC:2.7.1.12] D Desfe_1093 tungsten-dependent formaldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D Desfe_0695 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D Desfe_0718 Fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Desfe_1349 archaeal fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] C 00040 Pentose and glucuronate interconversions D Desfe_0510 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:dfd00051] D Desfe_1128 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D Desfe_0111 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Desfe_0188 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Desfe_0962 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Desfe_0189 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Desfe_1244 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Desfe_0510 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D Desfe_0718 Fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Desfe_1349 archaeal fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Desfe_1348 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Desfe_0020 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:dfd00052] D Desfe_0628 GHMP kinase K00849 galK; galactokinase [EC:2.7.1.6] D Desfe_0627 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Desfe_0535 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Desfe_0629 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Desfe_1210 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Desfe_0111 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Desfe_0188 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Desfe_0578 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Desfe_0357 glycoside hydrolase family 35 K12308 bgaB; beta-galactosidase [EC:3.2.1.23] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:dfd00500] D Desfe_0624 glycosyl hydrolase family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Desfe_0403 glycosyl transferase group 1 K00703 glgA; starch synthase [EC:2.4.1.21] D Desfe_0264 glycosyl transferase group 1 K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Desfe_0405 Alpha-amylase K07405 E3.2.1.1A; alpha-amylase [EC:3.2.1.1] D Desfe_0644 alpha amylase catalytic region K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D Desfe_0404 4-alpha-glucanotransferase K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25] D Desfe_0406 alpha amylase K16146 pep2; maltokinase [EC:2.7.1.175] D Desfe_0111 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Desfe_0188 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Desfe_0578 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Desfe_1128 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:dfd00520] D Desfe_0022 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Desfe_0081 sugar isomerase (SIS) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Desfe_1429 Nucleotidyl transferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] D Desfe_0578 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Desfe_0111 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Desfe_0188 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Desfe_0628 GHMP kinase K00849 galK; galactokinase [EC:2.7.1.6] D Desfe_0627 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Desfe_0535 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Desfe_0629 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Desfe_1210 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Desfe_1128 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] D Desfe_0962 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Desfe_0189 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Desfe_1244 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] C 00620 Pyruvate metabolism [PATH:dfd00620] D Desfe_0503 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Desfe_1298 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Desfe_1299 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Desfe_0502 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Desfe_0505 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Desfe_1296 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Desfe_0504 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Desfe_1297 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Desfe_0499 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Desfe_0475 2-oxoglutarate synthase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Desfe_0498 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Desfe_0474 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Desfe_0667 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Desfe_1240 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D Desfe_1347 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Desfe_0977 acetyl coenzyme A synthetase (ADP forming), alpha domain protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D Desfe_1051 CoA-binding domain protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D Desfe_1050 ATP-grasp domain protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D Desfe_0782 ATP-grasp domain protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D Desfe_0880 Carbamoyl-phosphate synthase L chain ATP-binding protein K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D Desfe_0591 Conserved carboxylase region K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Desfe_0003 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Desfe_0879 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Desfe_0849 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:dfd00630] D Desfe_0849 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Desfe_0852 biotin/lipoyl attachment domain-containing protein K15037 K15037; biotin carboxyl carrier protein D Desfe_1189 Glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D Desfe_1131 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Desfe_0132 Haloacid dehalogenase domain protein hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Desfe_1132 phosphoglycolate phosphatase K22223 pgp; phosphoglycolate phosphatase [EC:3.1.3.18] D Desfe_1247 ribulose 1,5-bisphosphate carboxylase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Desfe_1253 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Desfe_0099 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Desfe_0671 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Desfe_0669 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Desfe_0668 Glycine cleavage system P-protein K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Desfe_0670 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Desfe_0667 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Desfe_0672 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00640 Propanoate metabolism [PATH:dfd00640] D Desfe_0977 acetyl coenzyme A synthetase (ADP forming), alpha domain protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D Desfe_1051 CoA-binding domain protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D Desfe_1050 ATP-grasp domain protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D Desfe_0782 ATP-grasp domain protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D Desfe_0667 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Desfe_0503 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Desfe_1298 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Desfe_1299 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Desfe_0502 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Desfe_0505 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Desfe_1296 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Desfe_0504 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Desfe_1297 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Desfe_0852 biotin/lipoyl attachment domain-containing protein K15037 K15037; biotin carboxyl carrier protein D Desfe_0004 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Desfe_0200 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Desfe_0775 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Desfe_1156 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Desfe_1155 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:dfd00650] D Desfe_0849 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Desfe_0004 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Desfe_0200 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Desfe_0775 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Desfe_0503 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Desfe_1298 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Desfe_1299 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Desfe_0502 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Desfe_0505 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Desfe_1296 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Desfe_0504 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Desfe_1297 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Desfe_0499 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Desfe_0475 2-oxoglutarate synthase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Desfe_0498 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Desfe_0474 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Desfe_0366 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00660 C5-Branched dibasic acid metabolism D Desfe_1156 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Desfe_1155 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism [PATH:dfd00562] D Desfe_0735 D-fructose 1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Desfe_0885 L-myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D Desfe_1348 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:dfd00190] D Desfe_1074 NADH dehydrogenase (quinone) K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D Desfe_0352 respiratory-chain NADH dehydrogenase subunit 1 K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D Desfe_0343 NADH-ubiquinone oxidoreductase, subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D Desfe_1115 Sodium-transporting two-sector ATPase K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D Desfe_1116 H+transporting two-sector ATPase alpha/beta subunit central region K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D Desfe_1107 V-type ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D Desfe_1112 H+transporting two-sector ATPase E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D Desfe_1109 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H D Desfe_1110 V-type ATPase 116 kDa subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D Desfe_1111 H+transporting two-sector ATPase C subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D Desfe_1153 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:dfd00710] D Desfe_1247 ribulose 1,5-bisphosphate carboxylase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Desfe_0261 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Desfe_0262 glyceraldehyde 3-phosphate dehydrogenase (NAD(P)+) K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D Desfe_0718 Fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Desfe_0594 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Desfe_0020 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Desfe_1348 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00720 Other carbon fixation pathways [PATH:dfd00720] D Desfe_0503 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Desfe_1298 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Desfe_1299 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Desfe_0502 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Desfe_0505 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Desfe_1296 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Desfe_0504 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Desfe_1297 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Desfe_0879 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Desfe_0880 Carbamoyl-phosphate synthase L chain ATP-binding protein K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D Desfe_0591 Conserved carboxylase region K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Desfe_1155 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Desfe_1156 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Desfe_0849 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Desfe_0499 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Desfe_0475 2-oxoglutarate synthase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Desfe_0498 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Desfe_0474 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Desfe_0497 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Desfe_0500 2-oxoglutarate ferredoxin oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Desfe_0852 biotin/lipoyl attachment domain-containing protein K15037 K15037; biotin carboxyl carrier protein C 00680 Methane metabolism [PATH:dfd00680] D Desfe_0671 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Desfe_1253 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Desfe_0063 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Desfe_0718 Fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Desfe_1349 archaeal fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Desfe_0297 6-phospho 3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D Desfe_0079 Orotidine 5'-phosphate decarboxylase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43] D Desfe_0503 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Desfe_1298 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Desfe_1299 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Desfe_0502 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Desfe_0505 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Desfe_1296 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Desfe_0504 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Desfe_1297 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Desfe_0879 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Desfe_0416 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Desfe_0945 Phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Desfe_0998 HAD-superfamily hydrolase, subfamily IB (PSPase-like) K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Desfe_0121 Pyridoxal-dependent decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] C 00910 Nitrogen metabolism [PATH:dfd00910] D Desfe_0075 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Desfe_0099 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Desfe_1133 sulfide dehydrogenase (flavoprotein) subunit SudA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Desfe_0107 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:dfd00920] D Desfe_1290 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D Desfe_1092 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D Desfe_0630 cysteine synthase K10150 cysO; cysteine synthase / O-phosphoserine sulfhydrylase / cystathionine beta-synthase [EC:2.5.1.47 2.5.1.65 4.2.1.22] D Desfe_0378 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:dfd00061] D Desfe_0025 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Desfe_1209 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:dfd00071] D Desfe_0849 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Desfe_1240 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism D Desfe_0909 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] C 00564 Glycerophospholipid metabolism [PATH:dfd00564] D Desfe_0910 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D Desfe_0913 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Desfe_1388 3-dehydroquinate synthase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] D Desfe_1302 geranylgeranylglyceryl phosphate synthase family protein K17104 E2.5.1.41; phosphoglycerol geranylgeranyltransferase [EC:2.5.1.41] D Desfe_1130 UbiA prenyltransferase K17105 E2.5.1.42; geranylgeranylglycerol-phosphate geranylgeranyltransferase [EC:2.5.1.42] D Desfe_0223 CDP-diglyceride synthetase K19664 carS; CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase [EC:2.7.7.67] D Desfe_0234 2,3-di-O-geranylgeranylglyceryl phosphate reductase K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:dfd00230] D Desfe_1105 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Desfe_0195 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K22199 ppm; phosphopentomutase [EC:5.4.2.7] D Desfe_0111 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Desfe_0188 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Desfe_0584 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Desfe_0487 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Desfe_0488 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Desfe_0489 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Desfe_0490 ATP-dependent carboxylate-amine ligase domain protein ATP-grasp K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D Desfe_0486 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D Desfe_0484 phosphoribosylformylglycinamidine synthase, purS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D Desfe_0485 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Desfe_0492 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Desfe_0491 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Desfe_0483 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Desfe_0494 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Desfe_0495 IMP biosynthesis enzyme PurP domain protein K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23] D Desfe_0493 IMP biosynthesis enzyme PurP domain protein K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23] D Desfe_1330 phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Desfe_0192 inosine/xanthosine triphosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D Desfe_1434 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Desfe_0766 molybdopterin dehydrogenase FAD-binding protein K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4] D Desfe_0454 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Desfe_1233 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Desfe_1100 adenylyl cyclase CyaB K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1] D Desfe_0482 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Desfe_0233 AMP phosphorylase K18931 deoA; AMP phosphorylase [EC:2.4.2.57] D Desfe_0317 Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D Desfe_0886 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Desfe_0008 Adenylate kinase K18532 AK6; adenylate kinase [EC:2.7.4.3] D Desfe_0994 Nucleoside-triphosphatase K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D Desfe_1323 histidine triad (HIT) protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D Desfe_0764 dihydroorotase, multifunctional complex type K01466 allB; allantoinase [EC:3.5.2.5] D Desfe_0107 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:dfd00240] D Desfe_0763 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Desfe_0459 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D Desfe_0458 dihydroorotate oxidase B, electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D Desfe_0457 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Desfe_0456 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Desfe_0023 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Desfe_0604 hypothetical protein K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Desfe_0162 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Desfe_1260 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Desfe_0969 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D Desfe_0961 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Desfe_0790 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Desfe_0233 AMP phosphorylase K18931 deoA; AMP phosphorylase [EC:2.4.2.57] D Desfe_0710 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Desfe_1233 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Desfe_1243 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D Desfe_0216 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Desfe_1235 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Desfe_0260 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:dfd00250] D Desfe_0590 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Desfe_0580 peptidase T2 asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D Desfe_1253 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Desfe_0482 Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Desfe_0494 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Desfe_0763 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Desfe_0004 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Desfe_0200 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Desfe_0775 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Desfe_1133 sulfide dehydrogenase (flavoprotein) subunit SudA K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Desfe_0075 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Desfe_0099 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Desfe_0485 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Desfe_0022 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Desfe_0081 sugar isomerase (SIS) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Desfe_0487 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Desfe_0488 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:dfd00260] D Desfe_1398 Pyridoxal-5'-phosphate-dependent protein beta subunit K01733 thrC; threonine synthase [EC:4.2.3.1] D Desfe_0716 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Desfe_0453 Pyridoxal-5'-phosphate-dependent protein beta subunit K01733 thrC; threonine synthase [EC:4.2.3.1] D Desfe_0671 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Desfe_1253 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D Desfe_0416 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Desfe_0945 Phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Desfe_0998 HAD-superfamily hydrolase, subfamily IB (PSPase-like) K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Desfe_0988 Glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Desfe_0669 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Desfe_0668 Glycine cleavage system P-protein K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Desfe_0670 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Desfe_0667 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Desfe_0672 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Desfe_0630 cysteine synthase K10150 cysO; cysteine synthase / O-phosphoserine sulfhydrylase / cystathionine beta-synthase [EC:2.5.1.47 2.5.1.65 4.2.1.22] D Desfe_0761 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:dfd00270] D Desfe_0378 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D Desfe_0630 cysteine synthase K10150 cysO; cysteine synthase / O-phosphoserine sulfhydrylase / cystathionine beta-synthase [EC:2.5.1.47 2.5.1.65 4.2.1.22] D Desfe_0124 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Desfe_0101 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Desfe_0674 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Desfe_1003 purine or other phosphorylase family 1 K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D Desfe_1159 methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D Desfe_0318 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Desfe_0109 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Desfe_1366 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Desfe_1356 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Desfe_0590 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Desfe_0945 Phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Desfe_0944 ParB domain protein nuclease K23370 serK; L-serine kinase (ADP) [EC:2.7.1.226] C 00280 Valine, leucine and isoleucine degradation [PATH:dfd00280] D Desfe_0667 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Desfe_0852 biotin/lipoyl attachment domain-containing protein K15037 K15037; biotin carboxyl carrier protein D Desfe_0835 6-phosphogluconate dehydrogenase NAD-binding protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D Desfe_0849 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Desfe_0366 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis C 00300 Lysine biosynthesis [PATH:dfd00300] D Desfe_1213 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Desfe_1077 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Desfe_0731 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Desfe_0370 putative transcriptional regulator, GntR family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D Desfe_0841 putative transcriptional regulator, GntR family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] C 00310 Lysine degradation [PATH:dfd00310] D Desfe_0667 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Desfe_0849 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00220 Arginine biosynthesis [PATH:dfd00220] D Desfe_0212 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Desfe_0305 Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Desfe_0485 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Desfe_0099 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Desfe_0107 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D Desfe_0075 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Desfe_0590 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00330 Arginine and proline metabolism [PATH:dfd00330] D Desfe_0859 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Desfe_0153 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D Desfe_0674 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Desfe_0101 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Desfe_0590 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism [PATH:dfd00350] D Desfe_0590 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Desfe_0121 Pyridoxal-dependent decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] D Desfe_1240 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00360 Phenylalanine metabolism D Desfe_0590 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism [PATH:dfd00380] D Desfe_0667 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Desfe_0849 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:dfd00400] D Desfe_0761 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Desfe_0590 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:dfd00410] D Desfe_0121 Pyridoxal-dependent decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] D Desfe_0004 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Desfe_0200 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Desfe_0775 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Desfe_0418 pantothenate synthetase K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] D Desfe_0260 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] C 00430 Taurine and hypotaurine metabolism D Desfe_0277 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:dfd00450] D Desfe_0320 cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D Desfe_1363 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Desfe_0577 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:dfd00460] D Desfe_0624 glycosyl hydrolase family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Desfe_0277 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Desfe_0580 peptidase T2 asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D Desfe_0671 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism D Desfe_0485 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] C 00480 Glutathione metabolism [PATH:dfd00480] D Desfe_0277 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Desfe_0674 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis C 00550 Peptidoglycan biosynthesis C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:dfd00730] D Desfe_0198 hydroxymethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Desfe_0794 phosphomethylpyrimidine kinase K21219 thiDN; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3] D Desfe_0818 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Desfe_0795 thiazole-adenylate synthase K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59] D Desfe_0567 AIR synthase related protein K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D Desfe_0994 Nucleoside-triphosphatase K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D Desfe_0886 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:dfd00740] D Desfe_1094 transcriptional regulator of a riboflavin/FAD biosynthetic operon K07732 rfk; riboflavin kinase, archaea type [EC:2.7.1.161] D Desfe_0758 cytidyltransferase-related domain protein K14656 ribL; FAD synthetase [EC:2.7.7.2] D Desfe_1105 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Desfe_0144 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:dfd00750] D Desfe_1398 Pyridoxal-5'-phosphate-dependent protein beta subunit K01733 thrC; threonine synthase [EC:4.2.3.1] D Desfe_0716 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Desfe_0453 Pyridoxal-5'-phosphate-dependent protein beta subunit K01733 thrC; threonine synthase [EC:4.2.3.1] D Desfe_0451 pyridoxal phosphate synthase yaaD subunit K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D Desfe_0452 pyridoxal phosphate synthase yaaE subunit K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:dfd00760] D Desfe_0973 Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Desfe_1385 cytidyltransferase-related domain protein K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] D Desfe_0747 cytidyltransferase-related domain protein K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] D Desfe_0092 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D Desfe_1180 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:dfd00770] D Desfe_0413 ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Desfe_0412 ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Desfe_0417 pantothenate kinase K06982 pok; pantoate kinase [EC:2.7.1.169] D Desfe_0418 pantothenate synthetase K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] D Desfe_0420 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Desfe_1439 protein of unknown function DUF359 K09735 dpck; GTP-dependent dephospho-CoA kinase [EC:2.7.1.237] D Desfe_0260 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D Desfe_0121 Pyridoxal-dependent decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] C 00780 Biotin metabolism [PATH:dfd00780] D Desfe_0025 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Desfe_1209 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Desfe_0749 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:dfd00785] D Desfe_0178 Radical SAM domain protein K09711 lipS1; lipoyl synthase D Desfe_0177 Radical SAM domain protein K24689 lipS2; lipoyl synthase D Desfe_0175 Bacterial lipoate protein ligase C-terminus K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D Desfe_0176 biotin/lipoate A/B protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D Desfe_0667 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Desfe_0669 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Desfe_0668 Glycine cleavage system P-protein K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Desfe_0670 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Desfe_0672 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:dfd00790] D Desfe_0332 protein of unknown function DUF198 K17488 mptA; GTP cyclohydrolase IV [EC:3.5.4.39] D Desfe_0334 protein of unknown function DUF372 K09739 mptD; dihydroneopterin aldolase [EC:4.1.2.25] D Desfe_0333 uncharacterized Rossmann fold enzyme K07142 mptE; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Desfe_0276 beta-ribofuranosylaminobenzene 5'-phosphate synthase K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54] D Desfe_0179 metal-dependent hydrolase, beta-lactamase superfamily II K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D Desfe_0335 flavoprotein K18853 dmrX; dihydromethanopterin reductase (acceptor) [EC:1.5.99.15] D Desfe_0288 Radical SAM domain protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Desfe_0287 cyclic pyranopterin monophosphate synthase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Desfe_0285 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Desfe_0271 molybdopterin binding domain protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Desfe_0560 molybdopterin molybdochelatase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Desfe_0792 molybdopterin molybdochelatase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Desfe_0862 molybdenum cofactor cytidylyltransferase K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] C 00670 One carbon pool by folate [PATH:dfd00670] D Desfe_0671 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Desfe_0670 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Desfe_1235 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] C 00830 Retinol metabolism C 00860 Porphyrin metabolism D Desfe_1449 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis D Desfe_0144 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:dfd00900] D Desfe_0849 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Desfe_0366 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D Desfe_0787 3-hydroxy-3-methylglutaryl-coenzyme A reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] D Desfe_0207 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36] D Desfe_0065 isopentenyl phosphate kinase K06981 ipk; isopentenyl phosphate kinase [EC:2.7.4.26] D Desfe_0218 putative aconitase subunit 1 K25517 acnX1; phosphomecalonate degydratase large subunit [EC:4.2.1.182] D Desfe_0217 putative aconitase subunit 2 K09128 acnX2; phosphomecalonate degydratase small subunit [EC:4.2.1.182] D Desfe_0219 Carboxylyase-related protein K25518 E4.1.1.126; anhydromevalonate phosphate decarboxylase [EC:4.1.1.126] D Desfe_0144 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Desfe_1451 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D Desfe_0078 Polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Desfe_1048 undecaprenyl diphosphate synthase K15888 uppS; tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D Desfe_1429 Nucleotidyl transferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:dfd00946] D Desfe_0624 glycosyl hydrolase family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis D Desfe_1213 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:dfd00521] D Desfe_0578 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Desfe_0111 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Desfe_0188 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Desfe_0885 L-myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D Desfe_0735 D-fructose 1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Desfe_1429 Nucleotidyl transferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Desfe_0578 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis D Desfe_1429 Nucleotidyl transferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] C 00401 Novobiocin biosynthesis D Desfe_0590 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D Desfe_0025 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Desfe_1209 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics C 00999 Biosynthesis of various plant secondary metabolites [PATH:dfd00999] D Desfe_0124 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Desfe_0624 glycosyl hydrolase family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D Desfe_0849 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation D Desfe_0144 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:dfd00625] D Desfe_1240 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation D Desfe_0503 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Desfe_1298 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Desfe_1299 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Desfe_0502 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Desfe_0505 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Desfe_1296 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Desfe_0504 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Desfe_1297 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:dfd00626] D Desfe_1240 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:dfd03020] D Desfe_1470 DNA-directed RNA polymerase subunit B K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6] D Desfe_1469 DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] D Desfe_1468 DNA-directed RNA polymerase, subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] D Desfe_1458 DNA-directed RNA polymerase K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6] D Desfe_0040 RNA polymerase dimerization K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6] D Desfe_1441 DNA-directed RNA polymerase K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] D Desfe_1361 hypothetical protein K03052 rpoG; DNA-directed RNA polymerase subunit G [EC:2.7.7.6] D Desfe_1471 RNA polymerase Rpb5 K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6] D Desfe_1150 DNA-directed RNA polymerase, subunit K K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6] D Desfe_1454 DNA-directed RNA polymerase, subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6] D Desfe_0154 DNA-directed RNA polymerase subunit P K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6] D Desfe_1292 YL1 domain containing protein K00960 rpo13; DNA-directed RNA polymerase subunit 13 [EC:2.7.7.6] C 03022 Basal transcription factors [PATH:dfd03022] D Desfe_0156 Transcription factor TFIIB cyclin-related protein K03124 TFIIB; transcription initiation factor TFIIB D Desfe_1043 Transcription factor TFIIB cyclin-related protein K03124 TFIIB; transcription initiation factor TFIIB D Desfe_0646 TATA binding protein of transcription factor TFIID K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D Desfe_1367 Transcription factor TFIIE, alpha subunit K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:dfd03010] D Desfe_1453 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Desfe_1280 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Desfe_1460 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Desfe_1266 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Desfe_1464 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Desfe_1271 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Desfe_1455 ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D Desfe_1462 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Desfe_1459 ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D Desfe_1465 ribosomal protein S23 (S12) K02950 RP-S12; small subunit ribosomal protein S12 D Desfe_1461 ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Desfe_1272 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Desfe_1433 Ribosomal S13S15 domain protein K02956 RP-S15; small subunit ribosomal protein S15 D Desfe_1277 ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D Desfe_1282 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Desfe_1430 ribosomal protein S3Ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D Desfe_1274 Ribosomal protein S4E, central domain protein K02987 RP-S4e; small subunit ribosomal protein S4e D Desfe_1444 Ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e D Desfe_1047 ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e D Desfe_1352 Ribosomal protein S17e K02962 RP-S17e; small subunit ribosomal protein S17e D Desfe_1229 Ribosomal protein S19e K02966 RP-S19e; small subunit ribosomal protein S19e D Desfe_1438 Ribosomal protein S24e K02974 RP-S24e; small subunit ribosomal protein S24e D Desfe_1080 30S ribosomal protein S25e K02975 RP-S25e; small subunit ribosomal protein S25e D Desfe_1399 Ribosomal protein S26E K02976 RP-S26e; small subunit ribosomal protein S26e D Desfe_0900 Ribosomal protein S27E K02978 RP-S27e; small subunit ribosomal protein S27e D Desfe_1437 Ribosomal protein S27a K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D Desfe_1447 Ribosomal protein S28e K02979 RP-S28e; small subunit ribosomal protein S28e D Desfe_0990 Ribosomal protein S30 K02983 RP-S30e; small subunit ribosomal protein S30e D Desfe_1218 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Desfe_1285 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Desfe_1288 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Desfe_1273 50S ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D Desfe_1270 ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D Desfe_1217 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D Desfe_1219 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Desfe_1216 LSU ribosomal protein L12AE K02869 RP-L12; large subunit ribosomal protein L12 D Desfe_1456 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Desfe_1276 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Desfe_1264 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Desfe_1267 ribosomal protein L18P/L5E K02881 RP-L18; large subunit ribosomal protein L18 D Desfe_1281 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Desfe_1286 ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D Desfe_1275 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Desfe_1279 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Desfe_1265 ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D Desfe_1287 50S ribosomal protein L4P K02930 RP-L4e; large subunit ribosomal protein L4e D Desfe_1448 ribosomal protein L7Ae/L30e/S12e/Gadd45 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D Desfe_0035 Ribosomal protein L10e/L16 K02866 RP-L10e; large subunit ribosomal protein L10e D Desfe_1259 LSU ribosomal protein L14E K02875 RP-L14e; large subunit ribosomal protein L14e D Desfe_1426 LSU ribosomal protein L15E K02877 RP-L15e; large subunit ribosomal protein L15e D Desfe_1457 50S ribosomal protein L18e K02883 RP-L18e; large subunit ribosomal protein L18e D Desfe_1268 Ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e D Desfe_0032 Ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e D Desfe_1446 Ribosomal protein L24E K02896 RP-L24e; large subunit ribosomal protein L24e D Desfe_1325 hypothetical protein K02896 RP-L24e; large subunit ribosomal protein L24e D Desfe_1467 ribosomal protein L7Ae/L30e/S12e/Gadd45 K02908 RP-L30e; large subunit ribosomal protein L30e D Desfe_1226 Ribosomal protein L31e K02910 RP-L31e; large subunit ribosomal protein L31e D Desfe_1269 Ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e D Desfe_1261 Ribosomal protein L34e K02915 RP-L34e; large subunit ribosomal protein L34e D Desfe_1392 Ribosomal protein L37e K02922 RP-L37e; large subunit ribosomal protein L37e D Desfe_1417 Ribosomal L37ae protein K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D Desfe_1227 Ribosomal protein L39e K02924 RP-L39e; large subunit ribosomal protein L39e D Desfe_0940 Ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D Desfe_0899 Ribosomal protein L44E K02929 RP-L44e; large subunit ribosomal protein L44e D Desfe_1224 50S ribosomal protein LX K02944 RP-LX; large subunit ribosomal protein LX D Desfe_R0029 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Desfe_R0028 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Desfe_R0042 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:dfd00970] D Desfe_R0001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Desfe_R0014 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Desfe_R0041 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Desfe_R0023 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Desfe_R0034 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Desfe_R0012 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Desfe_R0045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Desfe_R0019 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Desfe_R0048 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Desfe_R0005 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Desfe_R0022 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Desfe_R0011 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Desfe_R0003 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Desfe_R0036 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Desfe_R0007 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Desfe_R0006 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Desfe_R0035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Desfe_R0025 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Desfe_R0030 tRNA-His K14226 tRNA-His; tRNA His D Desfe_R0026 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Desfe_R0009 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Desfe_R0015 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Desfe_R0032 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Desfe_R0049 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Desfe_R0004 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Desfe_R0002 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Desfe_R0013 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Desfe_R0018 tRNA-Met K14230 tRNA-Met; tRNA Met D Desfe_R0044 tRNA-Met K14230 tRNA-Met; tRNA Met D Desfe_R0024 tRNA-Met K14230 tRNA-Met; tRNA Met D Desfe_R0037 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Desfe_R0017 tRNA-OTHER K14232 tRNA-Pro; tRNA Pro D Desfe_R0039 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Desfe_R0027 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Desfe_R0047 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Desfe_R0050 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Desfe_R0038 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Desfe_R0010 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Desfe_R0020 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Desfe_R0043 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Desfe_R0016 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Desfe_R0008 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Desfe_R0021 tRNA-Val K14237 tRNA-Val; tRNA Val D Desfe_R0031 tRNA-Val K14237 tRNA-Val; tRNA Val D Desfe_R0033 tRNA-Val K14237 tRNA-Val; tRNA Val D Desfe_1449 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Desfe_0950 glutamyl-tRNA(Gln) amidotransferase subunit D K09482 gatD; glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] D Desfe_0951 glutamyl-tRNA(Gln) amidotransferase subunit E K03330 gatE; glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] D Desfe_1215 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Desfe_0883 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Desfe_0321 tRNA synthetase class II (D K and N) K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Desfe_0422 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Desfe_0152 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Desfe_1319 Threonyl-tRNA synthetase editing domain-containing protein K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Desfe_0602 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Desfe_1002 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Desfe_0577 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Desfe_1166 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Desfe_0726 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Desfe_0709 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Desfe_0724 lysyl-tRNA synthetase, class I K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D Desfe_0558 Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Desfe_1119 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Desfe_1314 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Desfe_0312 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Desfe_0266 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Desfe_1341 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Desfe_0080 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:dfd03060] D Desfe_1263 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Desfe_0034 GTP-binding signal recognition particle SRP54 G-domain protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Desfe_R0046 RNA component of signal recognition particle K01983 ffs; SRP RNA D Desfe_1222 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Desfe_1221 protein translocase SEC61 complex, gamma subunit K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D Desfe_1046 Ribonucleoprotein complex SRP, Srp19 component K03105 SRP19; signal recognition particle subunit SRP19 D Desfe_0561 arsenite efflux ATP-binding protein ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Desfe_0060 peptidase S26B, signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89] D Desfe_0906 peptidase S26B, signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:dfd04122] D Desfe_0285 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Desfe_0288 Radical SAM domain protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Desfe_0898 thiamine S protein K03636 moaD; sulfur-carrier protein D Desfe_0286 thiamine S protein K03636 moaD; sulfur-carrier protein D Desfe_0694 MoaD family protein K03636 moaD; sulfur-carrier protein D Desfe_0771 thiamine S protein K03636 moaD; sulfur-carrier protein D Desfe_0012 thiamine S protein K03636 moaD; sulfur-carrier protein D Desfe_0011 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Desfe_0287 cyclic pyranopterin monophosphate synthase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Desfe_0271 molybdopterin binding domain protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Desfe_0818 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Desfe_0010 hypothetical protein K03154 thiS; sulfur carrier protein C 03050 Proteasome [PATH:dfd03050] D Desfe_1369 Proteasome-activating nucleotidase K03420 psmR; proteasome regulatory subunit D Desfe_1422 proteasome endopeptidase complex, alpha subunit K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D Desfe_1379 proteasome endopeptidase complex, beta subunit K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D Desfe_1387 Proteasome endopeptidase complex K03433 psmB; proteasome beta subunit [EC:3.4.25.1] C 03018 RNA degradation [PATH:dfd03018] D Desfe_0038 RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) K07573 CSL4; exosome complex component CSL4 D Desfe_1420 Exosome complex RNA-binding protein Rrp4 K03679 RRP4; exosome complex component RRP4 D Desfe_1418 3' exoribonuclease K12589 RRP42; exosome complex component RRP42 D Desfe_1419 exosome complex exonuclease 1 K11600 RRP41; exosome complex component RRP41 D Desfe_0063 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] B B 09124 Replication and repair C 03030 DNA replication [PATH:dfd03030] D Desfe_1391 TOPRIM domain-containing protein K02316 dnaG; DNA primase [EC:2.7.7.101] D Desfe_0115 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Desfe_1394 DNA polymerase Pol2 K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D Desfe_1409 DNA polymerase B region K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D Desfe_0822 MCM family protein K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D Desfe_0044 DNA primase, small subunit K02683 priS; DNA primase small subunit [EC:2.7.7.102] D Desfe_0895 DNA primase large subunit K18882 priL; DNA primase large subunit D Desfe_0043 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Desfe_0548 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Desfe_1295 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Desfe_0820 Replication factor C K04801 rfcS; replication factor C small subunit D Desfe_0819 AAA ATPase central domain protein K04800 rfcL; replication factor C large subunit D Desfe_1184 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Desfe_0650 DNA ligase I, ATP-dependent Dnl1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03410 Base excision repair [PATH:dfd03410] D Desfe_0423 HhH-GPD family protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Desfe_0043 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Desfe_0548 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Desfe_1295 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Desfe_1184 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Desfe_0650 DNA ligase I, ATP-dependent Dnl1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Desfe_0652 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Desfe_1104 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Desfe_1123 phosphoesterase DHHA1 K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] C 03420 Nucleotide excision repair [PATH:dfd03420] D Desfe_0834 ERCC4 domain protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D Desfe_0043 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Desfe_0548 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Desfe_1295 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Desfe_0650 DNA ligase I, ATP-dependent Dnl1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03430 Mismatch repair [PATH:dfd03430] D Desfe_1123 phosphoesterase DHHA1 K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Desfe_0043 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Desfe_0548 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Desfe_1295 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Desfe_0650 DNA ligase I, ATP-dependent Dnl1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03440 Homologous recombination D Desfe_1123 phosphoesterase DHHA1 K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] C 03450 Non-homologous end-joining D Desfe_1184 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:dfd03250] D Desfe_0707 metal dependent phosphohydrolase K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] D Desfe_1440 DNA-directed RNA polymerase, subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4 D Desfe_1220 LSU ribosomal protein L24A K15172 SUPT5H; transcription elongation factor SPT5 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:dfd02010] D Desfe_0161 ABC-type tungstate transport system, permease component, TupB K05772 tupA; tungstate transport system substrate-binding protein D Desfe_0159 ABC-type tungstate transport system, periplasmic component, TupA K05773 tupB; tungstate transport system permease protein D Desfe_0158 ABC transporter related protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D Desfe_0291 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Desfe_0290 binding-protein-dependent transport systems inner membrane component K02018 modB; molybdate transport system permease protein D Desfe_0289 ABC transporter related protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Desfe_0871 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Desfe_0870 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Desfe_0869 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Desfe_1188 carbohydrate ABC transporter ATP-binding protein, CUT1 family K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Desfe_0354 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D Desfe_0355 binding-protein-dependent transport systems inner membrane component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Desfe_0356 binding-protein-dependent transport systems inner membrane component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Desfe_0018 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins D Desfe_0720 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins D Desfe_0016 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Desfe_0722 nucleoside ABC transporter membrane protein K23535 nupB; general nucleoside transport system permease protein D Desfe_0015 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein D Desfe_0723 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein D Desfe_0721 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D Desfe_0017 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D Desfe_0169 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Desfe_0168 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D Desfe_0167 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D Desfe_0166 ABC transporter related protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Desfe_0186 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Desfe_0315 ABC transporter related protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:dfd03070] D Desfe_1263 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Desfe_1222 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Desfe_0034 GTP-binding signal recognition particle SRP54 G-domain protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:dfd02020] D Desfe_0169 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Desfe_0302 triphosphoribosyl-dephospho-CoA protein K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D Desfe_0099 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Desfe_0849 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Desfe_1206 TRAP C4-dicarboxylate transport system permease DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:dfd02024] D Desfe_0934 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Desfe_0306 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Desfe_0360 solute binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Desfe_0657 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Desfe_0361 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Desfe_0658 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Desfe_0307 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Desfe_0936 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Desfe_0308 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Desfe_0362 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Desfe_0659 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Desfe_0309 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Desfe_0660 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Desfe_0364 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Desfe_0365 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Desfe_1263 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Desfe_1222 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Desfe_0034 GTP-binding signal recognition particle SRP54 G-domain protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Desfe_0063 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance C 01502 Vancomycin resistance C 01503 Cationic antimicrobial peptide (CAMP) resistance B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:dfd01000] C 01001 Protein kinases [BR:dfd01001] D Desfe_1435 Mn2+dependent serine/threonine protein kinase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D Desfe_1202 Non-specific serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Desfe_0122 RIO-like kinase K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C 01009 Protein phosphatases and associated proteins [BR:dfd01009] D Desfe_1198 translation initiation factor 2 subunit beta (aeIF-2b) K03238 EIF2S2; translation initiation factor 2 subunit 2 D Desfe_1356 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Desfe_0998 HAD-superfamily hydrolase, subfamily IB (PSPase-like) K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:dfd01002] D Desfe_1317 peptidase A24A prepilin type IV K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] D Desfe_0501 hydrogenase maturation protease K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51] D Desfe_1254 pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D Desfe_0454 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Desfe_0487 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Desfe_0488 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Desfe_0022 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Desfe_0081 sugar isomerase (SIS) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Desfe_0929 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Desfe_1077 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Desfe_0731 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Desfe_1343 methionine aminopeptidase, type II K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Desfe_0300 peptidase M29 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-] D Desfe_1078 Carboxypeptidase Taq K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D Desfe_0398 Heat shock protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D Desfe_1245 peptidase zinc-dependent K06974 amzA; archaemetzincin [EC:3.4.-.-] D Desfe_0593 peptidase M55 D-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-] D Desfe_0060 peptidase S26B, signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89] D Desfe_0906 peptidase S26B, signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89] D Desfe_0643 Rhomboid family protein K07059 K07059; rhomboid family protein D Desfe_1422 proteasome endopeptidase complex, alpha subunit K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D Desfe_1379 proteasome endopeptidase complex, beta subunit K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D Desfe_1387 Proteasome endopeptidase complex K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D Desfe_0580 peptidase T2 asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D Desfe_0277 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Desfe_1055 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein D Desfe_0750 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein D Desfe_1054 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein D Desfe_0751 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:dfd01003] D Desfe_0833 Glycosyl transferase, family 4, conserved region K01001 ALG7; UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15] D Desfe_0211 Oligosaccharyl transferase STT3 subunit K07151 STT3; dolichyl-diphosphooligosaccharide---protein glycosyltransferase [EC:2.4.99.18] D Desfe_0708 Dolichyl-phosphate beta-D-mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D Desfe_0403 glycosyl transferase group 1 K00703 glgA; starch synthase [EC:2.4.1.21] D Desfe_0066 GPI mannosyltransferase 1-like protein K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47] C 01005 Lipopolysaccharide biosynthesis proteins C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:dfd01011] C 01004 Lipid biosynthesis proteins [BR:dfd01004] D Desfe_0025 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Desfe_1209 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Desfe_0977 acetyl coenzyme A synthetase (ADP forming), alpha domain protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D Desfe_1051 CoA-binding domain protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D Desfe_1050 ATP-grasp domain protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D Desfe_0782 ATP-grasp domain protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:dfd01006] D Desfe_0078 Polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] C 01007 Amino acid related enzymes [BR:dfd01007] D Desfe_0724 lysyl-tRNA synthetase, class I K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D Desfe_1449 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Desfe_1341 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Desfe_0080 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Desfe_1002 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Desfe_0558 Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Desfe_0577 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Desfe_0709 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Desfe_1166 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Desfe_0726 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Desfe_0321 tRNA synthetase class II (D K and N) K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Desfe_0422 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Desfe_0883 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Desfe_1314 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Desfe_0152 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Desfe_0602 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Desfe_1119 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Desfe_1319 Threonyl-tRNA synthetase editing domain-containing protein K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Desfe_1215 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Desfe_0312 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Desfe_0266 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Desfe_0590 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Desfe_0988 Glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Desfe_0004 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Desfe_0200 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Desfe_0775 aminotransferase class-III K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D Desfe_1253 aminotransferase class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:dfd03000] D Desfe_1366 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Desfe_0646 TATA binding protein of transcription factor TFIID K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D Desfe_0328 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D Desfe_0053 regulatory protein ArsR K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Desfe_0411 Phosphomethylpyrimidine kinase K22206 thiR; XRE family transcriptional regulator, thiamine biosynthesis regulator D Desfe_0856 iron (metal) dependent repressor, DtxR family K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D Desfe_0749 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Desfe_0574 putative transcriptional regulator K22301 opcR; HTH-type transcriptional regulator, osmoprotectant uptake regulator D Desfe_0762 DNA binding protein, Tfx family K09714 tfx; HTH-type transcriptional regulator, fmd operon transcriptional regulator D Desfe_1016 CRISPR-associated HTH regulatory protein, Csa3 family K07725 csa3; CRISPR-associated protein Csa3 D Desfe_0429 CRISPR locus-related DNA-binding protein K07725 csa3; CRISPR-associated protein Csa3 D Desfe_0993 transcriptional regulator, XRE family K07728 K07728; putative transcriptional regulator D Desfe_0386 putative transcriptional regulator, CopG family K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D Desfe_0857 transcriptional regulator NikR, CopG family K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator C 03021 Transcription machinery [BR:dfd03021] D Desfe_0156 Transcription factor TFIIB cyclin-related protein K03124 TFIIB; transcription initiation factor TFIIB D Desfe_1043 Transcription factor TFIIB cyclin-related protein K03124 TFIIB; transcription initiation factor TFIIB D Desfe_0646 TATA binding protein of transcription factor TFIID K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D Desfe_1367 Transcription factor TFIIE, alpha subunit K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha D Desfe_1440 DNA-directed RNA polymerase, subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4 D Desfe_1220 LSU ribosomal protein L24A K15172 SUPT5H; transcription elongation factor SPT5 D Desfe_0649 protein of unknown function ATP binding protein K24104 GPN; GPN-loop GTPase D Desfe_0582 small G protein, GTPase SAR1 K24104 GPN; GPN-loop GTPase D Desfe_1466 NusA family KH domain protein K02600 nusA; transcription termination/antitermination protein NusA D Desfe_1469 DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] D Desfe_1468 DNA-directed RNA polymerase, subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] D Desfe_1470 DNA-directed RNA polymerase subunit B K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6] D Desfe_1458 DNA-directed RNA polymerase K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6] D Desfe_1441 DNA-directed RNA polymerase K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] D Desfe_1361 hypothetical protein K03052 rpoG; DNA-directed RNA polymerase subunit G [EC:2.7.7.6] D Desfe_1471 RNA polymerase Rpb5 K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6] D Desfe_1150 DNA-directed RNA polymerase, subunit K K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6] D Desfe_0040 RNA polymerase dimerization K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6] D Desfe_1454 DNA-directed RNA polymerase, subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6] D Desfe_0154 DNA-directed RNA polymerase subunit P K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6] D Desfe_1292 YL1 domain containing protein K00960 rpo13; DNA-directed RNA polymerase subunit 13 [EC:2.7.7.6] D Desfe_0042 transcription termination factor Tfs K03057 tfs; transcription factor S D Desfe_1351 DNA-directed RNA polymerase, M/15 kDa subunit K03057 tfs; transcription factor S C 03019 Messenger RNA biogenesis [BR:dfd03019] D Desfe_1440 DNA-directed RNA polymerase, subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4 D Desfe_1220 LSU ribosomal protein L24A K15172 SUPT5H; transcription elongation factor SPT5 D Desfe_0141 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase D Desfe_1395 cell division protein pelota K06965 PELO; protein pelota D Desfe_0942 peptide chain release factor 1 K03265 ETF1; peptide chain release factor subunit 1 D Desfe_1463 translation elongation factor EF-1, subunit alpha K03231 EEF1A; elongation factor 1-alpha D Desfe_0038 RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) K07573 CSL4; exosome complex component CSL4 D Desfe_1420 Exosome complex RNA-binding protein Rrp4 K03679 RRP4; exosome complex component RRP4 D Desfe_1419 exosome complex exonuclease 1 K11600 RRP41; exosome complex component RRP41 D Desfe_1418 3' exoribonuclease K12589 RRP42; exosome complex component RRP42 D Desfe_0063 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 03041 Spliceosome [BR:dfd03041] D Desfe_0299 ZPR1-related zinc finger protein K06874 ZPR1; zinc finger protein ZPR1 C 03011 Ribosome [BR:dfd03011] D Desfe_1430 ribosomal protein S3Ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D Desfe_1274 Ribosomal protein S4E, central domain protein K02987 RP-S4e; small subunit ribosomal protein S4e D Desfe_1444 Ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e D Desfe_1047 ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e D Desfe_1352 Ribosomal protein S17e K02962 RP-S17e; small subunit ribosomal protein S17e D Desfe_1229 Ribosomal protein S19e K02966 RP-S19e; small subunit ribosomal protein S19e D Desfe_1438 Ribosomal protein S24e K02974 RP-S24e; small subunit ribosomal protein S24e D Desfe_1080 30S ribosomal protein S25e K02975 RP-S25e; small subunit ribosomal protein S25e D Desfe_1399 Ribosomal protein S26E K02976 RP-S26e; small subunit ribosomal protein S26e D Desfe_0900 Ribosomal protein S27E K02978 RP-S27e; small subunit ribosomal protein S27e D Desfe_1437 Ribosomal protein S27a K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D Desfe_1447 Ribosomal protein S28e K02979 RP-S28e; small subunit ribosomal protein S28e D Desfe_0990 Ribosomal protein S30 K02983 RP-S30e; small subunit ribosomal protein S30e D Desfe_1287 50S ribosomal protein L4P K02930 RP-L4e; large subunit ribosomal protein L4e D Desfe_1448 ribosomal protein L7Ae/L30e/S12e/Gadd45 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D Desfe_0035 Ribosomal protein L10e/L16 K02866 RP-L10e; large subunit ribosomal protein L10e D Desfe_1259 LSU ribosomal protein L14E K02875 RP-L14e; large subunit ribosomal protein L14e D Desfe_1426 LSU ribosomal protein L15E K02877 RP-L15e; large subunit ribosomal protein L15e D Desfe_1457 50S ribosomal protein L18e K02883 RP-L18e; large subunit ribosomal protein L18e D Desfe_1268 Ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e D Desfe_0032 Ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e D Desfe_1446 Ribosomal protein L24E K02896 RP-L24e; large subunit ribosomal protein L24e D Desfe_1325 hypothetical protein K02896 RP-L24e; large subunit ribosomal protein L24e D Desfe_1467 ribosomal protein L7Ae/L30e/S12e/Gadd45 K02908 RP-L30e; large subunit ribosomal protein L30e D Desfe_1226 Ribosomal protein L31e K02910 RP-L31e; large subunit ribosomal protein L31e D Desfe_1269 Ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e D Desfe_1261 Ribosomal protein L34e K02915 RP-L34e; large subunit ribosomal protein L34e D Desfe_1392 Ribosomal protein L37e K02922 RP-L37e; large subunit ribosomal protein L37e D Desfe_1417 Ribosomal L37ae protein K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D Desfe_1227 Ribosomal protein L39e K02924 RP-L39e; large subunit ribosomal protein L39e D Desfe_0940 Ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D Desfe_0899 Ribosomal protein L44E K02929 RP-L44e; large subunit ribosomal protein L44e D Desfe_1453 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Desfe_1280 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Desfe_1460 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Desfe_1266 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Desfe_1464 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Desfe_1271 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Desfe_1455 ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D Desfe_1462 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Desfe_1459 ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D Desfe_1465 ribosomal protein S23 (S12) K02950 RP-S12; small subunit ribosomal protein S12 D Desfe_1461 ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Desfe_1272 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Desfe_1433 Ribosomal S13S15 domain protein K02956 RP-S15; small subunit ribosomal protein S15 D Desfe_1277 ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D Desfe_1282 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Desfe_1218 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Desfe_1285 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Desfe_1288 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Desfe_1273 50S ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D Desfe_1270 ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D Desfe_1217 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D Desfe_1219 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Desfe_1456 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Desfe_1276 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Desfe_1264 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Desfe_1267 ribosomal protein L18P/L5E K02881 RP-L18; large subunit ribosomal protein L18 D Desfe_1281 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Desfe_1286 ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D Desfe_1275 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Desfe_1279 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Desfe_1265 ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D Desfe_1216 LSU ribosomal protein L12AE K02869 RP-L12; large subunit ribosomal protein L12 D Desfe_1224 50S ribosomal protein LX K02944 RP-LX; large subunit ribosomal protein LX D Desfe_R0042 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Desfe_R0029 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Desfe_R0028 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:dfd03009] D Desfe_0991 Pre-mRNA processing ribonucleoprotein, binding domain protein K14564 NOP56; nucleolar protein 56 D Desfe_0047 RNA-binding protein Nop10p K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D Desfe_1416 Brix domain protein K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D Desfe_1232 Suppressor Mra1 family protein K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D Desfe_1203 KH domain protein K06961 KRR1; ribosomal RNA assembly protein D Desfe_1202 Non-specific serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Desfe_0122 RIO-like kinase K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] D Desfe_0008 Adenylate kinase K18532 AK6; adenylate kinase [EC:2.7.4.3] D Desfe_1337 protein of unknown function DUF367 K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D Desfe_1350 ABC transporter related protein K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 D Desfe_1383 small GTP-binding protein K06943 NOG1; nucleolar GTP-binding protein D Desfe_1278 ribonuclease P protein subunit Rpp29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D Desfe_1423 ribonuclease P protein subunit Rpp14 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D Desfe_1424 ribonuclease P subunit P30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D Desfe_0220 putative GTPase or GTP-binding protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] D Desfe_1225 translation initiation factor 6 (aeIF-6) K03264 EIF6; translation initiation factor 6 D Desfe_1200 NMD3 family protein K07562 NMD3; 60S ribosomal export protein NMD3 D Desfe_1421 Ribosome maturation protein SBDS K14574 SDO1; ribosome maturation protein SDO1 D Desfe_0141 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase D Desfe_0687 Uncharacterized protein family (UPF0113) K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D Desfe_0992 fibrillarin K04795 flpA; fibrillarin-like pre-rRNA processing protein D Desfe_1448 ribosomal protein L7Ae/L30e/S12e/Gadd45 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D Desfe_1466 NusA family KH domain protein K02600 nusA; transcription termination/antitermination protein NusA D Desfe_0029 ribosomal RNA adenine methylase transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Desfe_1257 methyltransferase small K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D Desfe_0421 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Desfe_0783 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Desfe_1162 alpha-L-glutamate ligase, RimK family K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D Desfe_1371 GTP-binding proten HflX K03665 hflX; GTPase D Desfe_0138 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Desfe_1230 putative RNA-binding protein containing KH domain, possibly ribosomal protein K07574 yhbY; RNA-binding protein D Desfe_1427 putative GTPase, probable translation factor K06942 ychF; ribosome-binding ATPase D Desfe_0603 RNA-binding protein AU-1 K22469 fau-1; probable ribonuclease FAU-1 [EC:3.1.26.-] C 03016 Transfer RNA biogenesis [BR:dfd03016] D Desfe_1278 ribonuclease P protein subunit Rpp29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D Desfe_1423 ribonuclease P protein subunit Rpp14 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D Desfe_1424 ribonuclease P subunit P30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D Desfe_1231 RNAse P, Rpr2/Rpp21 subunit K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5] D Desfe_0586 RNAse Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D Desfe_1313 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D Desfe_1246 archease family protein K24956 ZBTB8OS; protein archease D Desfe_1463 translation elongation factor EF-1, subunit alpha K03231 EEF1A; elongation factor 1-alpha D Desfe_1449 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Desfe_1119 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Desfe_0709 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Desfe_0726 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Desfe_0577 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Desfe_0558 Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Desfe_1215 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Desfe_0321 tRNA synthetase class II (D K and N) K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Desfe_0422 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Desfe_0152 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Desfe_1319 Threonyl-tRNA synthetase editing domain-containing protein K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Desfe_0602 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Desfe_1002 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Desfe_1166 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Desfe_1314 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Desfe_0312 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Desfe_0266 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Desfe_1341 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Desfe_0080 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Desfe_0949 protein of unknown function DUF516 K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Desfe_0164 Ala-tRNA(Pro) hydrolase K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-] D Desfe_1197 RNA modification enzyme, MiaB family K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5] D Desfe_0995 N(2),N(2)-dimethylguanosine tRNA methyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] D Desfe_1181 putative methyltransferase K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Desfe_0424 putative methyltransferase K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Desfe_1404 tRNA (adenine-N(1)-)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D Desfe_0711 Methyltransferase type 11 K15444 TRM9; tRNA (uracil-5-)-methyltransferase TRM9 [EC:2.1.1.229] D Desfe_0626 Uncharacterized protein family UPF0066 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D Desfe_0853 Wyosine base formation domain-containing protein K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44] D Desfe_0979 protein of unknown function DUF207 K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282] D Desfe_1191 tRNA pseudouridine synthase D TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D Desfe_0033 THUMP domain-containing protein K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25] D Desfe_1435 Mn2+dependent serine/threonine protein kinase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D Desfe_1436 metalloendopeptidase, glycoprotease family K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234] D Desfe_0201 histone acetyltransferase, ELP3 family K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311] D Desfe_0138 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Desfe_0839 hypothetical protein K06963 TAN1; tRNA acetyltransferase TAN1 D Desfe_R0040 RNA component of RNaseP K01978 rnpB; M1 RNA D Desfe_0544 CCA-adding enzyme K07558 K07558; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] D Desfe_1315 tRNA intron endonuclease, catalytic domain-containing protein K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16] D Desfe_0545 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Desfe_0724 lysyl-tRNA synthetase, class I K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D Desfe_0883 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Desfe_0149 Radical SAM domain protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D Desfe_0027 tRNA/rRNA methyltransferase (SpoU) K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D Desfe_0688 Fmu (Sun) domain protein K22901 trm4; tRNA (cytosine40_48-C5)-methyltransferase [EC:2.1.1.-] D Desfe_0585 RNA methylase K07446 trm-G10; tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213] D Desfe_1372 protein of unknown function DUF127 K07254 atrm56; tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] D Desfe_0784 PP-loop domain protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15] D Desfe_0441 PP-loop domain protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15] D Desfe_1359 archaeosine tRNA-ribosyltransferase K18779 tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase [EC:2.4.2.48] D Desfe_0818 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Desfe_0589 putative DNA-binding protein containing a Zn-ribbon domain K06932 tiaS; tRNA(Ile2)-agmatinylcytidine synthase [EC:6.3.4.22] D Desfe_0140 putative P-loop ATPase fused to an acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] C 03012 Translation factors [BR:dfd03012] D Desfe_1201 S1 IF1 family protein K03236 EIF1A; translation initiation factor 1A D Desfe_0155 translation initiation factor SUI1 K03113 EIF1; translation initiation factor 1 D Desfe_0048 translation initiation factor 2 subunit alpha (aeIF-2a) K03237 EIF2S1; translation initiation factor 2 subunit 1 D Desfe_1198 translation initiation factor 2 subunit beta (aeIF-2b) K03238 EIF2S2; translation initiation factor 2 subunit 2 D Desfe_1443 small GTP-binding protein K03242 EIF2S3; translation initiation factor 2 subunit 3 D Desfe_0598 initiation factor 2B related protein K03680 EIF2B4; translation initiation factor eIF-2B subunit delta D Desfe_0954 translation initiation factor 5A precursor (eIF-5A) K03263 EIF5A; translation initiation factor 5A D Desfe_1445 translation initiation factor eaIF-5B K03243 EIF5B; translation initiation factor 5B D Desfe_1225 translation initiation factor 6 (aeIF-6) K03264 EIF6; translation initiation factor 6 D Desfe_1463 translation elongation factor EF-1, subunit alpha K03231 EEF1A; elongation factor 1-alpha D Desfe_1194 translation elongation factor aEF-1 beta K03232 EEF1B; elongation factor 1-beta D Desfe_1412 translation elongation factor aEF-2 K03234 EEF2; elongation factor 2 D Desfe_0036 diphthamide biosynthesis protein K07561 DPH1; 2-(3-amino-3-carboxypropyl)histidine synthase [EC:2.5.1.108] D Desfe_1117 ATP binding protein K06927 DPH6; diphthine-ammonia ligase [EC:6.3.1.14] D Desfe_0942 peptide chain release factor 1 K03265 ETF1; peptide chain release factor subunit 1 D Desfe_0028 methyltransferase small K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Desfe_1192 peptidyl-tRNA hydrolase K04794 PTH2; peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] C 03110 Chaperones and folding catalysts [BR:dfd03110] D Desfe_1362 thermosome subunit K22447 cct; archaeal chaperonin D Desfe_1149 thermosome subunit K22447 cct; archaeal chaperonin D Desfe_0971 small heat shock protein HSP20 K13993 HSP20; HSP20 family protein D Desfe_1414 prefoldin, beta subunit K04798 pfdB; prefoldin beta subunit D Desfe_0788 hydrogenase expression/synthesis HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D Desfe_1389 peptidylprolyl isomerase FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] C 04131 Membrane trafficking [BR:dfd04131] D Desfe_0141 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase D Desfe_0561 arsenite efflux ATP-binding protein ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Desfe_1221 protein translocase SEC61 complex, gamma subunit K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D Desfe_1347 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Desfe_1463 translation elongation factor EF-1, subunit alpha K03231 EEF1A; elongation factor 1-alpha C 04121 Ubiquitin system [BR:dfd04121] D Desfe_0940 Ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D Desfe_1437 Ribosomal protein S27a K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D Desfe_0990 Ribosomal protein S30 K02983 RP-S30e; small subunit ribosomal protein S30e C 03051 Proteasome [BR:dfd03051] D Desfe_1422 proteasome endopeptidase complex, alpha subunit K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D Desfe_1379 proteasome endopeptidase complex, beta subunit K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D Desfe_1387 Proteasome endopeptidase complex K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D Desfe_1369 Proteasome-activating nucleotidase K03420 psmR; proteasome regulatory subunit C 03032 DNA replication proteins [BR:dfd03032] D Desfe_0043 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Desfe_0548 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Desfe_1295 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Desfe_1184 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Desfe_0650 DNA ligase I, ATP-dependent Dnl1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Desfe_1366 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Desfe_0047 RNA-binding protein Nop10p K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D Desfe_0834 ERCC4 domain protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D Desfe_1391 TOPRIM domain-containing protein K02316 dnaG; DNA primase [EC:2.7.7.101] D Desfe_0051 orc1/cdc6 family replication initiation protein K10725 cdc6A; archaeal cell division control protein 6 D Desfe_0001 orc1/cdc6 family replication initiation protein K10725 cdc6A; archaeal cell division control protein 6 D Desfe_0822 MCM family protein K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D Desfe_0044 DNA primase, small subunit K02683 priS; DNA primase small subunit [EC:2.7.7.102] D Desfe_0895 DNA primase large subunit K18882 priL; DNA primase large subunit D Desfe_0821 GINS complex subunit Sld5 K09723 ginS; DNA replication factor GINS D Desfe_0115 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Desfe_1394 DNA polymerase Pol2 K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D Desfe_1409 DNA polymerase B region K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D Desfe_0819 AAA ATPase central domain protein K04800 rfcL; replication factor C large subunit D Desfe_0820 Replication factor C K04801 rfcS; replication factor C small subunit D Desfe_1321 DNA topoisomerase (ATP-hydrolyzing) K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2] D Desfe_1322 DNA topoisomerase VI, B subunit K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2] D Desfe_1152 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Desfe_0957 Reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-] D Desfe_1335 Reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-] C 03036 Chromosome and associated proteins [BR:dfd03036] D Desfe_1366 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Desfe_1289 protein of unknown function DUF171 K09142 SPOUT1; methyltransferase [EC:2.1.1.-] D Desfe_1122 integrase family protein K04763 xerD; integrase/recombinase XerD D Desfe_0208 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D Desfe_0789 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning C 03400 DNA repair and recombination proteins [BR:dfd03400] D Desfe_0270 methylated-DNA/protein-cysteinemethyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Desfe_0423 HhH-GPD family protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Desfe_0043 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Desfe_0548 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Desfe_1295 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Desfe_1184 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Desfe_0650 DNA ligase I, ATP-dependent Dnl1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Desfe_0834 ERCC4 domain protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D Desfe_0707 metal dependent phosphohydrolase K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] D Desfe_0756 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Desfe_0652 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Desfe_1104 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Desfe_0938 Endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D Desfe_1123 phosphoesterase DHHA1 K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Desfe_0712 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50 D Desfe_0715 metallophosphoesterase K03547 sbcD; DNA repair protein SbcD/Mre11 D Desfe_1013 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1 D Desfe_1318 DNA repair and recombination protein RadA K04483 radA; DNA repair protein RadA D Desfe_0222 AAA ATPase K04484 radB; DNA repair protein RadB D Desfe_0875 Resolvase, Holliday junction-type K03552 hjr; holliday junction resolvase [EC:3.1.21.10] D Desfe_0791 DEAD/DEAH box helicase domain protein K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4] D Desfe_1152 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Desfe_0226 DEAD/H associated domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D Desfe_1291 DEAD/DEAH box helicase domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D Desfe_0377 protein of unknown function DUF650 K22585 nreA; DNA repair protein NreA C 03029 Mitochondrial biogenesis [BR:dfd03029] D Desfe_1278 ribonuclease P protein subunit Rpp29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D Desfe_1423 ribonuclease P protein subunit Rpp14 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D Desfe_1424 ribonuclease P subunit P30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D Desfe_1341 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Desfe_0726 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Desfe_0152 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Desfe_0558 Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Desfe_0208 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D Desfe_0789 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:dfd02000] D Desfe_0291 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Desfe_0290 binding-protein-dependent transport systems inner membrane component K02018 modB; molybdate transport system permease protein D Desfe_0289 ABC transporter related protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Desfe_0161 ABC-type tungstate transport system, permease component, TupB K05772 tupA; tungstate transport system substrate-binding protein D Desfe_0159 ABC-type tungstate transport system, periplasmic component, TupA K05773 tupB; tungstate transport system permease protein D Desfe_0158 ABC transporter related protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D Desfe_0871 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Desfe_0870 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Desfe_0869 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Desfe_1188 carbohydrate ABC transporter ATP-binding protein, CUT1 family K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Desfe_0354 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D Desfe_0355 binding-protein-dependent transport systems inner membrane component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Desfe_0356 binding-protein-dependent transport systems inner membrane component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D Desfe_0018 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins D Desfe_0720 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins D Desfe_0016 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Desfe_0722 nucleoside ABC transporter membrane protein K23535 nupB; general nucleoside transport system permease protein D Desfe_0015 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein D Desfe_0723 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein D Desfe_0721 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D Desfe_0017 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D Desfe_0169 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Desfe_0168 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D Desfe_0167 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D Desfe_0166 ABC transporter related protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Desfe_0934 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Desfe_0306 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Desfe_0360 solute binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Desfe_0657 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Desfe_0361 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Desfe_0658 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Desfe_0307 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Desfe_0936 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Desfe_0308 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Desfe_0362 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Desfe_0659 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Desfe_0309 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Desfe_0660 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Desfe_0364 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Desfe_0365 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Desfe_0058 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Desfe_0072 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Desfe_0057 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Desfe_0071 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Desfe_0056 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Desfe_0070 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Desfe_0186 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Desfe_0315 ABC transporter related protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Desfe_0639 ABC transporter related protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Desfe_0187 ABC transporter related protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Desfe_0754 ABC transporter related protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Desfe_0090 ABC-type thiamin-related transport system, permease component 1, predicted K16925 ykoE; energy-coupling factor transport system permease protein D Desfe_0384 periplasmic solute binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D Desfe_0385 ABC-3 protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein D Desfe_0383 ABC transporter related protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D Desfe_0622 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Desfe_0445 ABC transporter transmembrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Desfe_0408 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Desfe_0414 ABC-type Na+ efflux pump, permease K01992 ABC-2.P; ABC-2 type transport system permease protein D Desfe_0556 daunorubicin resistance ABC transporter, inner membrane subunit B K01992 ABC-2.P; ABC-2 type transport system permease protein D Desfe_0621 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Desfe_1082 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Desfe_1083 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Desfe_1310 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Desfe_0446 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Desfe_0409 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Desfe_0415 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Desfe_0555 daunorubicin resistance ABC transporter ATPase subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Desfe_0620 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Desfe_1084 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Desfe_0551 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Desfe_0553 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Desfe_1248 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Desfe_0225 ABC transporter related protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D Desfe_0106 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D Desfe_0963 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D Desfe_0606 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D Desfe_0570 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D Desfe_0631 MgtE-like divalent cation transporter K07244 K07244; mgtE-like transporter D Desfe_1374 hypothetical protein K21449 ata; trimeric autotransporter adhesin D Desfe_0174 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family D Desfe_0803 hypothetical protein K03297 emrE; small multidrug resistance pump D Desfe_1204 putative membrane protein K08978 TC.BAT1; bacterial/archaeal transporter family protein D Desfe_0608 EamA-like transporter family K03298 TC.DME; drug/metabolite transporter, DME family D Desfe_1382 putative permease, DMT superfamily K03298 TC.DME; drug/metabolite transporter, DME family D Desfe_1205 cation transporter K03498 trkH; trk/ktr system potassium uptake protein D Desfe_1195 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Desfe_1052 Chromate transporter K07240 chrA; chromate transporter D Desfe_1206 TRAP C4-dicarboxylate transport system permease DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Desfe_1207 Tripartite ATP-independent periplasmic transporter DctQ component K21394 yiaM; TRAP-type transport system small permease protein D Desfe_0561 arsenite efflux ATP-binding protein ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Desfe_1088 Na+/H+ antiporter MnhB subunit-related protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D Desfe_1068 NADH-ubiquinone oxidoreductase chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D Desfe_1089 NADH-ubiquinone oxidoreductase chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D Desfe_0348 NADH-ubiquinone oxidoreductase chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D Desfe_1091 NADH/Ubiquinone/plastoquinone (complex I) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D Desfe_0350 NADH/Ubiquinone/plastoquinone (complex I) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D Desfe_1076 NADH/Ubiquinone/plastoquinone (complex I) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D Desfe_1067 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D Desfe_1090 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D Desfe_0349 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D Desfe_1072 multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D Desfe_0344 multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D Desfe_1071 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D Desfe_1086 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D Desfe_0345 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D Desfe_0324 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins D Desfe_0641 membrane protein-like protein K23675 fmnP; riboflavin transporter D Desfe_0728 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein D Desfe_0172 FeoA family protein K04758 feoA; ferrous iron transport protein A D Desfe_0171 small GTP-binding protein K04759 feoB; ferrous iron transport protein B C 02044 Secretion system [BR:dfd02044] D Desfe_0463 flagellin K07325 flaB; archaeal flagellin FlaB D Desfe_0468 flagella biosynthesis ATPase K07331 flaH; archaeal flagellar protein FlaH D Desfe_0238 type II secretion system protein E K07332 flaI; archaeal flagellar protein FlaI D Desfe_0810 type II secretion system protein E K07332 flaI; archaeal flagellar protein FlaI D Desfe_0239 Type II secretion system F domain protein K07333 flaJ; archaeal flagellar protein FlaJ D Desfe_0470 Type II secretion system F domain protein K07333 flaJ; archaeal flagellar protein FlaJ D Desfe_1317 peptidase A24A prepilin type IV K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] D Desfe_1263 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Desfe_0034 GTP-binding signal recognition particle SRP54 G-domain protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Desfe_1222 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Desfe_1221 protein translocase SEC61 complex, gamma subunit K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D Desfe_1046 Ribonucleoprotein complex SRP, Srp19 component K03105 SRP19; signal recognition particle subunit SRP19 C 02042 Bacterial toxins C 02022 Two-component system C 02035 Bacterial motility proteins [BR:dfd02035] D Desfe_0463 flagellin K07325 flaB; archaeal flagellin FlaB D Desfe_0468 flagella biosynthesis ATPase K07331 flaH; archaeal flagellar protein FlaH D Desfe_0238 type II secretion system protein E K07332 flaI; archaeal flagellar protein FlaI D Desfe_0810 type II secretion system protein E K07332 flaI; archaeal flagellar protein FlaI D Desfe_0239 Type II secretion system F domain protein K07333 flaJ; archaeal flagellar protein FlaJ D Desfe_0470 Type II secretion system F domain protein K07333 flaJ; archaeal flagellar protein FlaJ D Desfe_1317 peptidase A24A prepilin type IV K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:dfd04812] D Desfe_1452 putative dioxygenase K06990 MEMO1; MEMO1 family protein C 04147 Exosome [BR:dfd04147] D Desfe_0063 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Desfe_0261 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Desfe_1347 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Desfe_0929 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D Desfe_0705 1-Cys peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D Desfe_1463 translation elongation factor EF-1, subunit alpha K03231 EEF1A; elongation factor 1-alpha D Desfe_1412 translation elongation factor aEF-2 K03234 EEF2; elongation factor 2 D Desfe_1184 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Desfe_1437 Ribosomal protein S27a K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D Desfe_0141 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase D Desfe_0849 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Desfe_1356 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Desfe_0886 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Desfe_1330 phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Desfe_0628 GHMP kinase K00849 galK; galactokinase [EC:2.7.1.6] D Desfe_0909 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Desfe_0099 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Desfe_0945 Phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Desfe_0667 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Desfe_0075 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Desfe_1348 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:dfd02048] D Desfe_1013 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1 D Desfe_1014 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2 D Desfe_1021 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Desfe_0433 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Desfe_1022 CRISPR-associated HD domain protein K07475 cas3; CRISPR-associated endonuclease Cas3-HD [EC:3.1.-.-] D Desfe_0434 putative HD superfamily hydrolase, possibly a nuclease K07475 cas3; CRISPR-associated endonuclease Cas3-HD [EC:3.1.-.-] D Desfe_1012 CRISPR-associated protein, Csa1 family K19085 csa1; CRISPR-associated protein Csa1 D Desfe_1018 CRISPR-associated autoregulator, Csa2 family K19074 csa2; CRISPR-associated protein Csa2 D Desfe_1016 CRISPR-associated HTH regulatory protein, Csa3 family K07725 csa3; CRISPR-associated protein Csa3 D Desfe_0429 CRISPR locus-related DNA-binding protein K07725 csa3; CRISPR-associated protein Csa3 D Desfe_0435 CRISPR-associated protein, MJ0385 K19086 csa4; CRISPR-associated protein Csa4 D Desfe_0430 hypothetical protein K19087 csa5; CRISPR-associated protein Csa5 D Desfe_0431 CRISPR-associated autoregulator, Csa2 family K19075 cst2; CRISPR-associated protein Cst2 D Desfe_1099 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Desfe_1015 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Desfe_0432 CRISPR-associated protein Cas5 family K19089 cas5a_b_c; CRISPR-associated protein Cas5a/b/c D Desfe_1019 CRISPR-associated protein Cas5 K19089 cas5a_b_c; CRISPR-associated protein Cas5a/b/c D Desfe_1366 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Desfe_1406 putative transcriptional regulator, CopG/Arc/MetJ family K07746 parD1_3_4; antitoxin ParD1/3/4 D Desfe_1449 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Desfe_1179 nucleotide binding protein, PINc K07060 nob1; endoribonuclease Nob1 [EC:3.1.-.-] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:dfd04090] C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:dfd00537] D Desfe_0929 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:dfd03100] D Desfe_R0001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Desfe_R0014 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Desfe_R0041 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Desfe_R0023 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Desfe_R0034 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Desfe_R0012 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Desfe_R0045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Desfe_R0019 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Desfe_R0048 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Desfe_R0005 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Desfe_R0022 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Desfe_R0011 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Desfe_R0003 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Desfe_R0036 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Desfe_R0007 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Desfe_R0006 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Desfe_R0035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Desfe_R0025 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Desfe_R0030 tRNA-His K14226 tRNA-His; tRNA His D Desfe_R0026 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Desfe_R0009 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Desfe_R0015 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Desfe_R0032 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Desfe_R0049 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Desfe_R0004 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Desfe_R0002 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Desfe_R0013 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Desfe_R0018 tRNA-Met K14230 tRNA-Met; tRNA Met D Desfe_R0044 tRNA-Met K14230 tRNA-Met; tRNA Met D Desfe_R0024 tRNA-Met K14230 tRNA-Met; tRNA Met D Desfe_R0037 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Desfe_R0017 tRNA-OTHER K14232 tRNA-Pro; tRNA Pro D Desfe_R0039 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Desfe_R0027 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Desfe_R0047 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Desfe_R0050 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Desfe_R0038 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Desfe_R0010 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Desfe_R0020 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Desfe_R0043 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Desfe_R0016 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Desfe_R0008 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Desfe_R0021 tRNA-Val K14237 tRNA-Val; tRNA Val D Desfe_R0031 tRNA-Val K14237 tRNA-Val; tRNA Val D Desfe_R0033 tRNA-Val K14237 tRNA-Val; tRNA Val D Desfe_R0029 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Desfe_R0028 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Desfe_R0042 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Desfe_R0046 RNA component of signal recognition particle K01983 ffs; SRP RNA D Desfe_R0040 RNA component of RNaseP K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Desfe_0380 (2Fe-2S)-binding domain-containing protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D Desfe_0767 (2Fe-2S)-binding domain-containing protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D Desfe_0770 (2Fe-2S)-binding domain-containing protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D Desfe_0379 molybdopterin dehydrogenase FAD-binding protein K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3] D Desfe_0769 molybdopterin dehydrogenase FAD-binding protein K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3] D Desfe_0393 thiamine pyrophosphate TPP-binding domain-containing protein K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D Desfe_0781 thiamine pyrophosphate TPP-binding domain-containing protein K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D Desfe_0392 Indolepyruvate ferredoxin oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D Desfe_0780 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain protein K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D Desfe_1141 NADH ubiquinone oxidoreductase 20 kDa subunit K18023 mbhJ; membrane-bound hydrogenase subunit mbhJ [EC:1.12.7.2] D Desfe_0340 NADH-quinone oxidoreductase, B subunit K18023 mbhJ; membrane-bound hydrogenase subunit mbhJ [EC:1.12.7.2] D Desfe_0330 Desulfoferrodoxin ferrous iron-binding region K05919 dfx; superoxide reductase [EC:1.15.1.2] D Desfe_0301 Ferritin Dps family protein K02217 ftnA; ferritin [EC:1.16.3.2] D Desfe_0007 Radical SAM domain protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5] D Desfe_1234 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Desfe_0583 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Desfe_1164 Radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Desfe_1136 NADH/Ubiquinone/plastoquinone (complex I) K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D Desfe_1138 respiratory-chain NADH dehydrogenase subunit 1 K12138 hyfC; hydrogenase-4 component C [EC:1.-.-.-] D Desfe_1183 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D Desfe_0069 diphthine synthase K20215 dph5; diphthine synthase [EC:2.1.1.98] D Desfe_1033 glycosyl transferase group 1 K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D Desfe_1064 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D Desfe_0588 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D Desfe_1354 phosphatidate cytidylyltransferase K18678 VTE5; phytol kinase [EC:2.7.1.182] D Desfe_1103 CDP-alcohol phosphatidyltransferase K17884 E2.7.8.39; archaetidylinositol phosphate synthase [EC:2.7.8.39] D Desfe_0824 thioesterase family protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29] D Desfe_0293 protein of unknown function DUF89 K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-] D Desfe_0134 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Desfe_0182 putative nuclease of the RecB family K07503 nucS; endonuclease [EC:3.1.-.-] D Desfe_0353 Arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89] D Desfe_0785 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D Desfe_0917 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Desfe_0612 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Desfe_0696 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Desfe_0844 ATPase associated with various cellular activities AAA_5 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Desfe_1096 protein of unknown function DUF62 K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D Desfe_0449 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Desfe_1173 N-glycosylase/DNA lyase K01741 E4.2.99.18; DNA-(apurinic or apyrimidinic site) lyase [EC:4.2.99.18] D Desfe_1384 RNA 3'-phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4] D Desfe_0826 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] C 99981 Carbohydrate metabolism D Desfe_1239 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A C 99982 Energy metabolism D Desfe_0477 ferredoxin K05337 fer; ferredoxin D Desfe_0730 ferredoxin K05337 fer; ferredoxin D Desfe_1140 hydrogenase 4 Fe-S subunit K12143 hyfH; hydrogenase-4 component H D Desfe_1139 NADH-ubiquinone oxidoreductase chain 49kDa K15830 hycE; formate hydrogenlyase subunit 5 D Desfe_0342 NADH-ubiquinone oxidoreductase chain 49kDa K14090 echE; ech hydrogenase subunit E D Desfe_0346 hypothetical protein K14113 ehbD; energy-converting hydrogenase B subunit D D Desfe_0347 Na+/H+ antiporter MnhB subunit-related protein K14118 ehbI; energy-converting hydrogenase B subunit I D Desfe_1069 membrane-bound hydrogenase subunit ehbH, membrane-bound hydrogenase subunit ehbI K14118 ehbI; energy-converting hydrogenase B subunit I C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism D Desfe_0941 integral membrane protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D Desfe_1370 transcriptional regulator, XRE family K03627 MBF1; putative transcription factor D Desfe_1334 nucleoid protein Alba K03622 ssh10b; archaea-specific DNA-binding protein D Desfe_1336 nucleoid protein Alba K03622 ssh10b; archaea-specific DNA-binding protein D Desfe_0180 Small nuclear ribonucleoprotein, LSM family K04796 RUXX; small nuclear ribonucleoprotein D Desfe_1393 Like-Sm ribonucleoprotein core K04796 RUXX; small nuclear ribonucleoprotein D Desfe_0997 transcriptional regulator consisting of an HTH domain fused to a Zn-ribbon K07743 K07743; transcriptional regulator D Desfe_0928 transcriptional regulators-like protein K07745 K07745; transcriptional regulator D Desfe_0136 transcriptional regulator, LuxR family K07745 K07745; transcriptional regulator C 99974 Translation D Desfe_0030 putative RNA-binding protein K07572 K07572; putative nucleotide binding protein D Desfe_1411 RNA-metabolising metallo-beta-lactamase K07577 K07577; putative mRNA 3-end processing factor D Desfe_0184 exonuclease of the beta-lactamase fold involved in RNA processing-like protein K07577 K07577; putative mRNA 3-end processing factor D Desfe_0037 DNA methylase K07579 K07579; putative methylase D Desfe_1193 putative Zn-ribbon RNA-binding protein with a function in translation K07580 K07580; Zn-ribbon RNA-binding protein D Desfe_1425 putative exosome subunit K07581 K07581; RNA-binding protein C 99975 Protein processing D Desfe_0338 Hydrogenase maturation protein HypC K04653 hypC; hydrogenase expression/formation protein HypC D Desfe_0861 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D Desfe_0337 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D Desfe_0087 AIR synthase related protein domain protein K04655 hypE; hydrogenase expression/formation protein HypE D Desfe_0339 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D Desfe_1357 PUA domain containing protein K07398 K07398; conserved protein with predicted RNA binding PUA domain D Desfe_0837 xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family K07402 xdhC; xanthine dehydrogenase accessory factor D Desfe_0610 membrane-bound serine protease (ClpP class) K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D Desfe_0120 TIP49 domain-containing protein K07472 TIP49; TBP-interacting protein D Desfe_0128 Translin K07477 K07477; translin D Desfe_1339 transposase, IS605 OrfB family K07496 K07496; putative transposase C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Desfe_0760 amino acid/polyamine/organocation transporter, APC superfamily K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D Desfe_0690 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D Desfe_0958 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D Desfe_0508 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D Desfe_0006 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family C 99978 Cell growth C 99993 Cell motility D Desfe_0633 archaeal flagellin-like protein K23255 pilA; archaeal type IV pilus assembly protein PilA C 99995 Signaling proteins D Desfe_0563 carbon starvation protein CstA K06200 cstA; carbon starvation protein D Desfe_0543 Ser/Thr protein kinase-like protein K07176 K07176; putative serine/threonine protein kinase D Desfe_1228 DNA-binding TFAR19-related protein K06875 PDCD5; programmed cell death protein 5 C 99992 Structural proteins C 99994 Others D Desfe_0165 PhoU family protein K02039 phoU; phosphate transport system protein D Desfe_0926 hemerythrin-like metal-binding protein K07216 hr; hemerythrin D Desfe_0792 molybdopterin molybdochelatase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] B B 09194 Poorly characterized C 99996 General function prediction only D Desfe_0876 ATPase, PilT family K06865 K06865; ATPase D Desfe_0752 DEAD/DEAH box helicase domain protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein D Desfe_0978 t-RNA-binding domain-containing protein K06878 K06878; tRNA-binding protein D Desfe_0974 putative phosphatase K07025 K07025; putative hydrolase of the HAD superfamily D Desfe_0272 Haloacid dehalogenase domain protein hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D Desfe_0830 HAD-superfamily hydrolase, subfamily IA, variant 1 K07025 K07025; putative hydrolase of the HAD superfamily D Desfe_0105 Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB D Desfe_0224 SufBD protein K09014 sufB; Fe-S cluster assembly protein SufB D Desfe_0595 membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein D Desfe_0089 TatD-related deoxyribonuclease K07049 K07049; TatD-related deoxyribonuclease D Desfe_0215 Sjogrens syndrome scleroderma autoantigen 1 K07143 K07143; UPF0148 protein D Desfe_0647 putative membrane protein K08979 K08979; putative membrane protein C 99997 Function unknown D Desfe_1358 enzymes of ATP-grasp superfamily K06869 K06869; uncharacterized protein D Desfe_0397 serine protease-like protein K06870 K06870; uncharacterized protein D Desfe_0651 serine protease-like protein K06870 K06870; uncharacterized protein D Desfe_0744 metal dependent phosphohydrolase K06885 K06885; uncharacterized protein D Desfe_0914 hydrolase of the alpha/beta superfamily K06889 K06889; uncharacterized protein D Desfe_0024 ATPase K06921 K06921; uncharacterized protein D Desfe_1028 ATPase K06921 K06921; uncharacterized protein D Desfe_1060 putative DNA-binding protein K06933 K06933; uncharacterized protein D Desfe_0845 putative DNA-binding protein with PD1-like DNA-binding motif K06934 K06934; uncharacterized protein D Desfe_0363 Radical SAM domain protein K06935 K06935; uncharacterized protein D Desfe_0890 putative Fe-S oxidoreductase K06940 K06940; uncharacterized protein D Desfe_0748 putative Fe-S oxidoreductase K06940 K06940; uncharacterized protein D Desfe_1172 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein D Desfe_0396 putative phosphoesterase K06953 K06953; uncharacterized protein D Desfe_0897 acetyltransferase K06975 K06975; uncharacterized protein D Desfe_0387 methyltransferase-like protein K06983 K06983; uncharacterized protein D Desfe_0616 putative hydrolase of the metallo-beta-lactamase superfamily K07022 K07022; uncharacterized protein D Desfe_0104 ABC transporter, membrane component K07033 K07033; uncharacterized protein D Desfe_1386 KH-domain/beta-lactamase-domain protein K07041 K07041; uncharacterized protein D Desfe_0252 PilT protein domain protein K07064 K07064; uncharacterized protein D Desfe_0367 putative nucleic-acid-binding protein containing a Zn-ribbon K07068 K07068; uncharacterized protein D Desfe_1396 DNA polymerase beta domain protein region K07073 K07073; uncharacterized protein D Desfe_0970 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein D Desfe_0442 metallophosphoesterase K07096 K07096; uncharacterized protein D Desfe_0773 Icc family phosphoesterase K07096 K07096; uncharacterized protein D Desfe_0236 phosphoesterase DHHA1 K07097 K07097; uncharacterized protein D Desfe_0401 putative DHD superfamily phosphohydrolase K07097 K07097; uncharacterized protein D Desfe_1158 phosphoribosyltransferase K07101 K07101; uncharacterized protein D Desfe_0163 phosphoribosyltransferase K07101 K07101; uncharacterized protein D Desfe_0455 phosphoribosyltransferase K07101 K07101; uncharacterized protein D Desfe_0269 transcriptional regulator-like protein K07108 K07108; uncharacterized protein D Desfe_0326 hypothetical protein K07108 K07108; uncharacterized protein D Desfe_0481 fumarate reductase/succinate dehydrogenase flavoprotein domain protein K07137 K07137; uncharacterized protein D Desfe_1442 SSU processome protein Utp24 K07158 K07158; uncharacterized protein D Desfe_0202 protein of unknown function DUF763 K09003 K09003; uncharacterized protein D Desfe_0002 protein of unknown function DUF99 K09120 K09120; uncharacterized protein D Desfe_0094 protein of unknown function DUF82 K09122 K09122; uncharacterized protein D Desfe_1005 protein of unknown function DUF355 K09129 K09129; uncharacterized protein D Desfe_0996 protein of unknown function DUF167 K09131 K09131; uncharacterized protein D Desfe_0093 AMMECR1 domain protein K09141 K09141; uncharacterized protein D Desfe_0235 protein of unknown function DUF429 K09147 K09147; uncharacterized protein D Desfe_1199 protein of unknown function DUF424 K09148 K09148; uncharacterized protein D Desfe_0816 protein of unknown function DUF432 K09149 K09149; uncharacterized protein D Desfe_0123 protein of unknown function DUF460 K09150 K09150; uncharacterized protein D Desfe_0327 putative PAS/PAC sensor protein K09155 K09155; uncharacterized protein D Desfe_0213 protein of unknown function DUF711 K09157 K09157; uncharacterized protein D Desfe_0322 metal dependent phosphohydrolase K09163 K09163; uncharacterized protein D Desfe_0076 protein of unknown function DUF504 K09715 K09715; uncharacterized protein D Desfe_0975 hypothetical protein K09717 K09717; uncharacterized protein D Desfe_0214 protein of unknown function UPF0147 K09721 K09721; uncharacterized protein D Desfe_0866 protein of unknown function DUF211 K09732 K09732; uncharacterized protein D Desfe_0547 protein of unknown function DUF54 K09736 K09736; uncharacterized protein D Desfe_1108 protein of unknown function DUF61 K09737 K09737; uncharacterized protein D Desfe_1182 protein of unknown function DUF371 K09738 K09738; uncharacterized protein D Desfe_0039 Protein of unknown function DUF2067 K09742 K09742; uncharacterized protein D Desfe_0863 putative phosphate transport regulator K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 13, 2024