+D GENES KO #

  KEGG Orthology (KO) - Megalodesulfovibrio gigas

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:dgg00010] D DGI_1383 gck; putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D DGI_2341 gpi; putative glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D DGI_2195 pfkA; putative diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DGI_2524 fbp; putative fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D DGI_3455 glpX; putative fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D DGI_0714 putative deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D DGI_1026 fbaB1; putative Fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D DGI_1695 putative ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D DGI_0591 fbaB; putative fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D DGI_0592 fbaB2; putative fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D DGI_0332 tpi; putative triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D DGI_2188 gap; putative type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DGI_2546 gap1; putative glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DGI_1347 pgk; putative phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D DGI_1753 gpmA; putative phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D DGI_3489 gpmB; putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D DGI_2697 putative homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D DGI_0704 eno; putative phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DGI_0179 pyk; putative pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D DGI_2938 putative pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DGI_2942 putative Pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DGI_3046 putative phosphoenolpyruvate synthase/pyruvate phosphate dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DGI_3042 putative pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DGI_2250 ppdK; putative Pyruvate water dikinase, phosphoenolpyruvate--protein phosphotransferase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DGI_1688 putative FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DGI_0996 poR; putative pyruvate-ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D DGI_1713 porA; putative pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DGI_0870 vorA; putative 2-ketoisovalerate ferredoxin reductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DGI_1712 porB; putative pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DGI_0871 vorB; putative thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DGI_1047 putative Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D DGI_1044 putative Alcohol dehydrogenase, class IV K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D DGI_0746 ald; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DGI_1438 putative acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DGI_1737 putative acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DGI_0581 putative acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DGI_1388 putative Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D DGI_0235 pgm; putative phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D DGI_3416 putative phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:dgg00020] D DGI_1379 gltA; putative citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1] D DGI_0640 putative pyruvate carboxyltransferase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3] D DGI_0463 aco; putative aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D DGI_1851 icd; putative isocitrate/isopropylmalate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D DGI_1688 putative FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DGI_1713 porA; putative pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DGI_0870 vorA; putative 2-ketoisovalerate ferredoxin reductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DGI_1712 porB; putative pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DGI_0871 vorB; putative thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DGI_0872 vorG; putative ketoisovalerate oxidoreductase subunit VorA K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D DGI_0869 vorC; putative Ferrodoxin-like protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D DGI_1569 fdrA; putative fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D DGI_0827 frdAII; putative fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D DGI_0828 frdBII; putative fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D DGI_1570 fdrB; putative succinate dehydrogenase and fumarate reductase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D DGI_0826 fdrCII; putative fumarate reductase respiratory complex K25996 frdC; succinate dehydrogenase subunit C D DGI_1568 fdrC; putative Fumarate reductase respiratory complex K25996 frdC; succinate dehydrogenase subunit C D DGI_1571 fumA; putative fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D DGI_1573 fumC; putative Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D DGI_3402 pycB; putative pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D DGI_0996 poR; putative pyruvate-ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:dgg00030] D DGI_2341 gpi; putative glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D DGI_1385 zwf; putative glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D DGI_1386 pgl; putative 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D DGI_1384 gnd; putative 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D DGI_1351 rpe; putative ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D DGI_1348 tkt; putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D DGI_2275 tal; putative translaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D DGI_1387 rpi; putative ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D DGI_3457 putative ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D DGI_0235 pgm; putative phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D DGI_3416 putative phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D DGI_3390 prsA; putative ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D DGI_1056 afor; putative Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D DGI_1447 putative aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D DGI_3127 putative aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D DGI_2431 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D DGI_0714 putative deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D DGI_1026 fbaB1; putative Fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D DGI_1695 putative ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D DGI_0591 fbaB; putative fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D DGI_0592 fbaB2; putative fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D DGI_2524 fbp; putative fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D DGI_3455 glpX; putative fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D DGI_2195 pfkA; putative diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:dgg00040] D DGI_2218 putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D DGI_0297 putative nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D DGI_2694 putative 4-diphosphocytidyl-2C-methyl-D-erythritol synthase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D DGI_1351 rpe; putative ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:dgg00051] D DGI_1582 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D DGI_3416 putative phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D DGI_3058 hypothetical protein K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D DGI_1548 putative GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D DGI_2195 pfkA; putative diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DGI_2524 fbp; putative fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D DGI_3455 glpX; putative fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D DGI_0714 putative deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D DGI_1026 fbaB1; putative Fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D DGI_1695 putative ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D DGI_0591 fbaB; putative fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D DGI_0592 fbaB2; putative fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D DGI_0332 tpi; putative triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D DGI_3457 putative ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D DGI_2414 putative PTS system transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D DGI_3114 putative PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component C 00052 Galactose metabolism [PATH:dgg00052] D DGI_1388 putative Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D DGI_0026 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D DGI_4014 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D DGI_0297 putative nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D DGI_2694 putative 4-diphosphocytidyl-2C-methyl-D-erythritol synthase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D DGI_0235 pgm; putative phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D DGI_3416 putative phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D DGI_1383 gck; putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D DGI_2195 pfkA; putative diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism [PATH:dgg00053] D DGI_2218 putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D DGI_0864 putative NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D DGI_0746 ald; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:dgg00500] D DGI_0297 putative nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D DGI_2694 putative 4-diphosphocytidyl-2C-methyl-D-erythritol synthase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D DGI_2713 putative EAL domain protein K02761 celB; cellobiose PTS system EIIC component D DGI_2305 putative glycogen/starch synthase K00703 glgA; starch synthase [EC:2.4.1.21] D DGI_2304 putative glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D DGI_2153 glgP; putative glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D DGI_2657 putative glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D DGI_2716 putative glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D DGI_1199 putative trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D DGI_2638 putative 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D DGI_0752 putative Alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D DGI_0751 putative trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D DGI_0235 pgm; putative phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D DGI_3416 putative phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D DGI_1383 gck; putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D DGI_2341 gpi; putative glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:dgg00520] D DGI_3098 putative Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D DGI_0670 glmS; putative glucosamine/fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DGI_0298 putative phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D DGI_0647 putative Bifunctional protein glmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D DGI_0448 putative UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D DGI_1249 putative UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D DGI_4066 N-acylneuraminate-9-phosphate synthase K05304 NANS; sialic acid synthase [EC:2.5.1.56 2.5.1.57 2.5.1.132] D DGI_1709 putative UDP-glucose 4-epimerase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-] D DGI_1401 hypothetical protein K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D DGI_2302 putative NAD-dependent epimerase/dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D DGI_1383 gck; putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D DGI_0235 pgm; putative phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D DGI_3416 putative phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D DGI_0297 putative nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D DGI_2694 putative 4-diphosphocytidyl-2C-methyl-D-erythritol synthase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D DGI_2218 putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D DGI_0026 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D DGI_4014 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D DGI_0864 putative NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D DGI_2414 putative PTS system transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D DGI_3114 putative PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component D DGI_2341 gpi; putative glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D DGI_1582 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D DGI_3058 hypothetical protein K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D DGI_1548 putative GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] C 00620 Pyruvate metabolism [PATH:dgg00620] D DGI_1438 putative acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DGI_1737 putative acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DGI_0581 putative acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DGI_0996 poR; putative pyruvate-ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D DGI_1713 porA; putative pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DGI_0870 vorA; putative 2-ketoisovalerate ferredoxin reductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DGI_1712 porB; putative pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DGI_0871 vorB; putative thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DGI_1688 putative FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DGI_1047 putative Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D DGI_1044 putative Alcohol dehydrogenase, class IV K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D DGI_1419 putative Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D DGI_1420 putative phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D DGI_0179 pyk; putative pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D DGI_3443 putative acetyl-CoA carboxylase carboxyltransferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D DGI_1898 putative Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D DGI_0746 ald; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DGI_1334 putative Rhodanese-like protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D DGI_0812 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D DGI_1574 mdh; putative malic protein NAD-binding protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D DGI_3402 pycB; putative pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D DGI_1571 fumA; putative fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D DGI_1573 fumC; putative Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D DGI_1569 fdrA; putative fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D DGI_0827 frdAII; putative fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D DGI_0828 frdBII; putative fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D DGI_1570 fdrB; putative succinate dehydrogenase and fumarate reductase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D DGI_0826 fdrCII; putative fumarate reductase respiratory complex K25996 frdC; succinate dehydrogenase subunit C D DGI_1568 fdrC; putative Fumarate reductase respiratory complex K25996 frdC; succinate dehydrogenase subunit C D DGI_2938 putative pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DGI_2942 putative Pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DGI_3046 putative phosphoenolpyruvate synthase/pyruvate phosphate dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DGI_3042 putative pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DGI_2250 ppdK; putative Pyruvate water dikinase, phosphoenolpyruvate--protein phosphotransferase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DGI_2708 glcB; putative malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D DGI_3263 leuA; putative 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D DGI_2503 putative alpha-isopropylmalate/homocitrate synthase family K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:dgg00630] D DGI_1438 putative acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DGI_1737 putative acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DGI_0581 putative acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DGI_2708 glcB; putative malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D DGI_1379 gltA; putative citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1] D DGI_0463 aco; putative aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D DGI_1422 ldh; putative D-lactate dehydrogenase (cytochrome) K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D DGI_3110 putative glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D DGI_1421 putative protein of unknown function DUF224 cysteine-rich region domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D DGI_3109 putative 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D DGI_2858 cat; putative catalase K03781 katE; catalase [EC:1.11.1.6] D DGI_0975 putative phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D DGI_0029 putative HAD-superfamily hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D DGI_3503 putative HAD-superfamily hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D DGI_1150 putative glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DGI_1257 putative Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DGI_0792 glnN; putative glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DGI_1912 putative serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DGI_1977 putative glycine cleavage system P-family protein K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D DGI_1976 putative glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D DGI_2296 gcvT; putative glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D DGI_1688 putative FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DGI_1978 putative glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D DGI_2428 putative hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D DGI_2429 putative 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D DGI_2431 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D DGI_1366 fdhA; putative Formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D DGI_3334 fdnG; putative formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D DGI_1364 fdhB; putative Formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D DGI_3335 putative Fe-S-cluster-containing hydrogenase component protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D DGI_0716 hmcB; putative hmc operon protein 2 K00124 fdoH; formate dehydrogenase iron-sulfur subunit D DGI_0377 ohcB; putative 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D DGI_3487 purU; putative formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:dgg00640] D DGI_1438 putative acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DGI_1737 putative acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DGI_0581 putative acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DGI_1419 putative Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D DGI_1420 putative phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D DGI_1688 putative FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DGI_3443 putative acetyl-CoA carboxylase carboxyltransferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] C 00650 Butanoate metabolism [PATH:dgg00650] D DGI_1569 fdrA; putative fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D DGI_0827 frdAII; putative fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D DGI_0828 frdBII; putative fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D DGI_1570 fdrB; putative succinate dehydrogenase and fumarate reductase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D DGI_0826 fdrCII; putative fumarate reductase respiratory complex K25996 frdC; succinate dehydrogenase subunit C D DGI_1568 fdrC; putative Fumarate reductase respiratory complex K25996 frdC; succinate dehydrogenase subunit C D DGI_0996 poR; putative pyruvate-ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D DGI_1713 porA; putative pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DGI_0870 vorA; putative 2-ketoisovalerate ferredoxin reductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D DGI_1712 porB; putative pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DGI_0871 vorB; putative thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D DGI_3482 putative acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DGI_3507 putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DGI_3481 putative amino acid-binding ACT domain-containing protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D DGI_3508 ilvH; putative acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D DGI_0737 putative acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] C 00660 C5-Branched dibasic acid metabolism [PATH:dgg00660] D DGI_3482 putative acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DGI_3507 putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DGI_3481 putative amino acid-binding ACT domain-containing protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D DGI_3508 ilvH; putative acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D DGI_0737 putative acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D DGI_3262 putative 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D DGI_3261 leuD; putative 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D DGI_3260 putative 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:dgg00562] D DGI_0335 putative inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D DGI_0332 tpi; putative triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:dgg00190] D DGI_0242 nuoA; putative NADH-ubiquinone/plastoquinone oxidoreductase chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D DGI_0243 nuoB; putative NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D DGI_0244 nuoC; putative NADH dehydrogenase C/D (quinone) K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D DGI_0245 nuoH; putative NADH dehydrogenase (quinone) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D DGI_0246 nuoI; putative 4Fe-4S ferredoxin iron-sulfur binding protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D DGI_0247 nuoJ; putative NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D DGI_0248 nuoK; putative NADH-quinone oxidoreductase chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D DGI_0253 nuoM; putative proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D DGI_0254 putative NADH dehydrogenase (quinone) K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D DGI_1569 fdrA; putative fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D DGI_0827 frdAII; putative fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D DGI_0828 frdBII; putative fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D DGI_1570 fdrB; putative succinate dehydrogenase and fumarate reductase iron-sulfur protein K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D DGI_0826 fdrCII; putative fumarate reductase respiratory complex K25996 frdC; succinate dehydrogenase subunit C D DGI_1568 fdrC; putative Fumarate reductase respiratory complex K25996 frdC; succinate dehydrogenase subunit C D DGI_1252 cydA; cytochrome bd quinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D DGI_1253 cydB; cytochrome bd quinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D DGI_0651 atpA; putative F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D DGI_0649 atpD; putative ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D DGI_0650 atpG; putative F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D DGI_0652 atpH; putative F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D DGI_0648 atpC; putative F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D DGI_1501 atpB; putative ATP synthase F0 subunit alpha K02108 ATPF0A; F-type H+-transporting ATPase subunit a D DGI_0653 atpF; putative H+transporting two-sector ATPase subunit B/B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b D DGI_0654 atpF1; putative H+-transporting two-sector ATPase subunit B/B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b D DGI_1502 atpE; putative ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D DGI_3065 putative V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D DGI_3064 hypothetical protein K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D DGI_3063 hypothetical protein K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D DGI_3067 hypothetical protein K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D DGI_3062 putative V-type ATPase subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D DGI_3061 putative V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D DGI_2411 putative manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:dgg00680] D DGI_1366 fdhA; putative Formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D DGI_3334 fdnG; putative formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D DGI_1364 fdhB; putative Formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D DGI_3335 putative Fe-S-cluster-containing hydrogenase component protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D DGI_0716 hmcB; putative hmc operon protein 2 K00124 fdoH; formate dehydrogenase iron-sulfur subunit D DGI_0377 ohcB; putative 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D DGI_1052 floxC; putative 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K00125 fdhB; formate dehydrogenase (coenzyme F420) beta subunit [EC:1.17.98.3 1.8.98.6] D DGI_2741 putative 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D DGI_1912 putative serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DGI_2431 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D DGI_0704 eno; putative phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DGI_0714 putative deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D DGI_1026 fbaB1; putative Fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D DGI_1695 putative ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D DGI_0591 fbaB; putative fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D DGI_0592 fbaB2; putative fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D DGI_2524 fbp; putative fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D DGI_3455 glpX; putative fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D DGI_2195 pfkA; putative diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DGI_3088 hypothetical protein K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12] D DGI_0631 putative formylmethanofuran dehydrogenase subunit E K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12] D DGI_1050 hdrA; putative heterodisulfide reductase subunit A K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D DGI_1049 hdrB; putative CoB--CoM heterodisulfide reductase K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D DGI_1048 hdrC; putative heterodisulfide reductase subunit C K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D DGI_1051 floxD; putative methyl-viologen-reducing hydrogenase delta subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6] D DGI_1419 putative Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D DGI_1420 putative phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D DGI_1438 putative acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DGI_1737 putative acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DGI_0581 putative acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DGI_2938 putative pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DGI_2942 putative Pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DGI_3046 putative phosphoenolpyruvate synthase/pyruvate phosphate dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DGI_3042 putative pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DGI_2250 ppdK; putative Pyruvate water dikinase, phosphoenolpyruvate--protein phosphotransferase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D DGI_1753 gpmA; putative phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D DGI_3489 gpmB; putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D DGI_2697 putative homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D DGI_0146 putative phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D DGI_1983 putative Aspartate aminotransferase K19793 mfnC; (5-formylfuran-3-yl)methyl phosphate transaminase [EC:2.6.1.108] C 00910 Nitrogen metabolism [PATH:dgg00910] D DGI_1514 nrfA; putative Nitrite reductase K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2] D DGI_1513 nrfH; putative cytochrome c nitrate reductase, small subunit K15876 nrfH; cytochrome c nitrite reductase small subunit D DGI_1277 putative nitrogenase molybdenum-iron protein subunit alpha K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D DGI_1276 putative nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D DGI_1280 nifH; Nitrogenase reductase K02588 nifH; nitrogenase iron protein NifH D DGI_1496 putative hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D DGI_3415 putative 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D DGI_1150 putative glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DGI_1257 putative Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DGI_0792 glnN; putative glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DGI_1339 putative pyridine nucleotide-disulfide oxidoreductase family protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D DGI_1577 putative glutamate synthase (NADPH) K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D DGI_1689 nfnB; putative glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D DGI_3028 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D DGI_3514 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:dgg00920] D DGI_0460 sat; putative sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D DGI_4053 apsK; adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D DGI_1831 cysC; putative adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D DGI_1852 putative 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D DGI_1556 putative phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D DGI_0457 aprA; Adenylylsulfate Reductase K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2] D DGI_0458 aprB; Adenylylsulfate Reductase K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2] D DGI_3007 paps; putative phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D DGI_0691 dsrA; Dissimilatory Sulfite Reductase I, chain A K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22] D DGI_0689 dsrB; Dissimilatory Sulfite Reductase I, chain B K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22] D DGI_2334 dsrM; putative hdr-like menaquinol oxidoreductase cytochrome b-like subunit K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10] D DGI_2335 dsrK; putative Cytoplasmic, binds 2 (4Fe-4S) K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10] D DGI_2336 dsrJ; putative Periplasmic (Sec) triheme cytochrome c K27189 dsrJ; [DsrC]-trisulfide reductase subunit J D DGI_2337 dsrO; putative dr-like menaquinol oxidoreductase iron-sulfur subunit 1 K27190 dsrO; [DsrC]-trisulfide reductase subunit O D DGI_2338 dsrP; putative polysulfide reductase NrfD K27191 dsrP; [DsrC]-trisulfide reductase subunit P D DGI_1815 putative FAD-dependent pyridine nucleotide-disulfide oxidoreductase domain-containing protein K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D DGI_0241 putative Nitrate reductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D DGI_0739 cysE; putative Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D DGI_0738 cysK; putative cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D DGI_1327 putative homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:dgg00061] D DGI_3443 putative acetyl-CoA carboxylase carboxyltransferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D DGI_1915 putative acyl carrier protein K02078 acpP; acyl carrier protein D DGI_2316 putative (Acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D DGI_1917 putative 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DGI_1913 putative 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DGI_1916 putative 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DGI_0435 putative beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D DGI_2242 putative fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DGI_3014 putative acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DGI_2476 putative Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:dgg00071] D DGI_2242 putative fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DGI_3014 putative acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DGI_2476 putative Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DGI_1047 putative Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D DGI_1044 putative Alcohol dehydrogenase, class IV K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D DGI_0746 ald; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:dgg00561] D DGI_2431 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D DGI_0746 ald; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DGI_1918 putative fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D DGI_1219 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D DGI_1595 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D DGI_3004 putative diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D DGI_3282 putative diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] C 00564 Glycerophospholipid metabolism [PATH:dgg00564] D DGI_1390 putative NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D DGI_0137 putative oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D DGI_1219 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D DGI_1595 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D DGI_3004 putative diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D DGI_3282 putative diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D DGI_0527 putative ethanolamine ammonia lyase large subunit K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D DGI_0528 putative Ethanolamine ammonia-lyase K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D DGI_2131 rsmA; putative phospholipid N-methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71] D DGI_3409 putative phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D DGI_3183 putative CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D DGI_3184 putative phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D DGI_2530 putative CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D DGI_1820 putative phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D DGI_1035 putative glycerol-1-phosphate dehydrogenase (NAD(P)(+)) K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism D DGI_1178 hypothetical protein K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D DGI_0538 putative G-D-S-L family lipolytic protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:dgg00230] D DGI_0235 pgm; putative phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D DGI_3416 putative phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D DGI_3390 prsA; putative ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D DGI_0191 putative amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D DGI_0678 putative phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D DGI_1646 putative phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D DGI_1807 putative phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D DGI_1877 putative phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D DGI_2422 putative phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D DGI_1403 putative AIR synthase related, C-terminal domain protein K23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3] D DGI_3193 purM; putative phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D DGI_0679 putative phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D DGI_1471 putative Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D DGI_1161 putative adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D DGI_1217 putative phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D DGI_2746 putative adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D DGI_2189 putative stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D DGI_3438 deoD; putative purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D DGI_1528 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D DGI_3464 putative hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D DGI_2200 quaB; putative inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D DGI_2724 putative Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D DGI_0669 putative nucleoside-triphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D DGI_1824 putative xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D DGI_2468 putative xanthine dehydrogenase FAD binding subunit K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4] D DGI_3145 coxM; putative aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D DGI_3143 coxS; putative xanthine dehydrogenase yagT iron-sulfur-binding subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D DGI_2198 quaA; putative GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D DGI_3217 hypothetical protein K00942 gmk; guanylate kinase [EC:2.7.4.8] D DGI_0841 putative ribonucleotide-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DGI_1236 putative anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D DGI_2687 putative (p)ppGpp synthetase I SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D DGI_1127 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D DGI_0553 putative adenylate/guanylate cyclase with Chase sensor K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D DGI_1453 putative adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D DGI_3473 putative adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1] D DGI_1215 putative adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D DGI_1610 putative Adenosine kinase K00856 ADK; adenosine kinase [EC:2.7.1.20] D DGI_2288 hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D DGI_2567 ak; putative Adenylate Kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D DGI_3026 putative nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D DGI_1831 cysC; putative adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D DGI_0460 sat; putative sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D DGI_4053 apsK; adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:dgg00240] D DGI_0189 putative carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D DGI_0743 carA; putative carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D DGI_1507 putative aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D DGI_1508 putative dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3] D DGI_2557 pyrD; putative dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D DGI_2556 putative Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D DGI_1160 putative Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D DGI_3218 putative orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D DGI_3412 pyrH; putative uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D DGI_2724 putative Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D DGI_3026 putative nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D DGI_1487 putative maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D DGI_2420 pyrG; putative CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D DGI_3029 putative Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D DGI_2189 putative stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D DGI_2897 putative uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D DGI_2357 putative Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D DGI_2288 hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D DGI_1236 putative anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D DGI_0841 putative ribonucleotide-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DGI_1910 putative CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D DGI_2191 tmk; putative thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D DGI_2154 putative deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D DGI_3451 thyX; putative FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:dgg00250] D DGI_0878 aspB; putative aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D DGI_1654 putative Aspartate transaminase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D DGI_1059 putative L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D DGI_1613 asn; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D DGI_0259 putative asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D DGI_4019 asnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D DGI_1796 putative alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D DGI_1888 putative alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D DGI_2161 argG; putative Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D DGI_2160 putative argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D DGI_1215 putative adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D DGI_1161 putative adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D DGI_1507 putative aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D DGI_1339 putative pyridine nucleotide-disulfide oxidoreductase family protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D DGI_1577 putative glutamate synthase (NADPH) K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D DGI_1689 nfnB; putative glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D DGI_1989 putative delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D DGI_1150 putative glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DGI_1257 putative Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DGI_0792 glnN; putative glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DGI_0189 putative carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D DGI_0743 carA; putative carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D DGI_2422 putative phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D DGI_0670 glmS; putative glucosamine/fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DGI_0191 putative amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:dgg00260] D DGI_2502 putative aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DGI_0412 putative aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DGI_2696 putative homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D DGI_3161 putative threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D DGI_3296 ltaE; putative threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D DGI_1912 putative serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DGI_2431 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D DGI_1753 gpmA; putative phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D DGI_3489 gpmB; putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D DGI_2697 putative homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D DGI_0146 putative phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D DGI_1977 putative glycine cleavage system P-family protein K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D DGI_1976 putative glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D DGI_2296 gcvT; putative glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D DGI_1688 putative FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DGI_1978 putative glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D DGI_3183 putative CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D DGI_2887 hypothetical protein K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D DGI_0603 putative Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D DGI_0602 putative tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:dgg00270] D DGI_0739 cysE; putative Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D DGI_0738 cysK; putative cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D DGI_2971 putative cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D DGI_3461 acsE; putative homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D DGI_1209 putative S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D DGI_2893 putative S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D DGI_0795 putative spermidine synthase with an N-terminal membrane domain K00797 speE; spermidine synthase [EC:2.5.1.16] D DGI_3135 putative spermidine synthase with an N-terminal membrane domain K00797 speE; spermidine synthase [EC:2.5.1.16] D DGI_2744 putative methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D DGI_1528 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D DGI_2747 putative Guanine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D DGI_2748 putative 5-methylthioadenosine/S-adenosylhomocysteine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D DGI_1741 putative translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D DGI_1036 putative 2,3-diketo-5-methylthio-1-phosphopentane phosphatase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87] D DGI_0935 putative cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DGI_2020 putative DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DGI_2028 putative DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DGI_0478 putative DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DGI_1104 putative S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D DGI_2502 putative aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DGI_0412 putative aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DGI_2696 putative homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D DGI_1165 hypothetical protein K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16] D DGI_2778 putative NIL domain-containing protein K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin D DGI_1327 putative homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D DGI_2970 putative O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D DGI_0204 putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DGI_0410 putative aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DGI_0878 aspB; putative aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D DGI_1654 putative Aspartate transaminase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D DGI_2887 hypothetical protein K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] C 00280 Valine, leucine and isoleucine degradation [PATH:dgg00280] D DGI_0204 putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DGI_0410 putative aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DGI_1688 putative FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DGI_0746 ald; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:dgg00290] D DGI_3262 putative 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D DGI_3261 leuD; putative 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D DGI_3260 putative 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D DGI_3482 putative acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DGI_3507 putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DGI_3481 putative amino acid-binding ACT domain-containing protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D DGI_3508 ilvH; putative acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D DGI_3509 ilvC; putative ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D DGI_0845 edd; putative dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D DGI_0204 putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DGI_0410 putative aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DGI_3263 leuA; putative 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D DGI_2503 putative alpha-isopropylmalate/homocitrate synthase family K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:dgg00300] D DGI_2696 putative homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D DGI_2502 putative aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DGI_0412 putative aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DGI_2763 putative dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DGI_2788 putative dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D DGI_2155 putative acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D DGI_2750 putative acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D DGI_2761 putative diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D DGI_2278 putative LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D DGI_1720 putative diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D DGI_0605 putative GntR family transcriptional regulator K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D DGI_0350 putative UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D DGI_0349 putative UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:dgg00310] D DGI_1688 putative FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DGI_1547 putative ornithine cyclodeaminase/mu-crystallin K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1] D DGI_0746 ald; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:dgg00220] D DGI_2162 argF; putative ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D DGI_2161 argG; putative Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D DGI_2160 putative argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D DGI_2422 putative phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D DGI_1150 putative glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DGI_1257 putative Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DGI_0792 glnN; putative glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DGI_0189 putative carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D DGI_0743 carA; putative carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D DGI_0878 aspB; putative aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D DGI_1654 putative Aspartate transaminase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D DGI_3463 putative acetyltransferase family protein K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D DGI_0136 putative Arginine biosynthesis bifunctional protein K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D DGI_2113 putative acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D DGI_0674 argC; putative N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D DGI_2155 putative acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:dgg00330] D DGI_1203 putative 5-oxoprolinase (ATP-hydrolyzing) K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D DGI_1204 putative 5-oxoprolinase (ATP-hydrolyzing) K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D DGI_0818 putative response regulator receiver protein K01584 adiA; arginine decarboxylase [EC:4.1.1.19] D DGI_2319 putative arginine decarboxylase, pyruvoyl-dependent K02626 pdaD; arginine decarboxylase [EC:4.1.1.19] D DGI_2329 aquA; putative agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D DGI_0079 putative N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D DGI_0795 putative spermidine synthase with an N-terminal membrane domain K00797 speE; spermidine synthase [EC:2.5.1.16] D DGI_3135 putative spermidine synthase with an N-terminal membrane domain K00797 speE; spermidine synthase [EC:2.5.1.16] D DGI_2893 putative S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D DGI_0746 ald; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DGI_2723 putative pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D DGI_1989 putative delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D DGI_0365 putative gamma-glutamyl kinase, glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D DGI_0084 putative Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D DGI_0878 aspB; putative aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D DGI_1654 putative Aspartate transaminase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D DGI_1547 putative ornithine cyclodeaminase/mu-crystallin K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1] C 00340 Histidine metabolism [PATH:dgg00340] D DGI_1512 putative ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D DGI_1511 putative phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D DGI_1727 putative phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D DGI_1525 putative imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D DGI_1527 putative Imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D DGI_1729 putative Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D DGI_2466 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DGI_3030 putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DGI_2930 putative PHP family histidinol phosphatase/hydrolase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15] D DGI_1470 putative histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D DGI_0746 ald; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:dgg00350] D DGI_0878 aspB; putative aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D DGI_1654 putative Aspartate transaminase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D DGI_2466 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DGI_3030 putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DGI_1047 putative Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D DGI_1044 putative Alcohol dehydrogenase, class IV K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00360 Phenylalanine metabolism [PATH:dgg00360] D DGI_0677 putative Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D DGI_3140 putative coenzyme F390 synthetase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D DGI_3493 paaK-2; putative phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D DGI_0878 aspB; putative aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D DGI_1654 putative Aspartate transaminase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D DGI_2466 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DGI_3030 putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism [PATH:dgg00380] D DGI_1688 putative FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DGI_0746 ald; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DGI_2858 cat; putative catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:dgg00400] D DGI_3016 putative 3-deoxy-7-phosphoheptulonate synthase K13853 aroG; 3-deoxy-7-phosphoheptulonate synthase / chorismate mutase [EC:2.5.1.54 5.4.99.5] D DGI_3017 putative 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D DGI_0591 fbaB; putative fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D DGI_0592 fbaB2; putative fructose-bisphosphate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D DGI_0593 putative 3-dehydroquinate synthase K11646 K11646; 3-dehydroquinate synthase II [EC:1.4.1.24] D DGI_0052 putative 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D DGI_2169 aroL; putative shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D DGI_3286 putative shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D DGI_0595 putative 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D DGI_2168 putative chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D DGI_0597 putative anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D DGI_0598 putative glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D DGI_0599 putative anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D DGI_0601 putative Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D DGI_2934 putative N-(5 -phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D DGI_0600 putative indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D DGI_0603 putative Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D DGI_0602 putative tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D DGI_0596 putative prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D DGI_0594 putative prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D DGI_0878 aspB; putative aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D DGI_1654 putative Aspartate transaminase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D DGI_2466 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DGI_3030 putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:dgg00410] D DGI_2538 putative aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D DGI_0746 ald; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DGI_1211 putative pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:dgg00430] D DGI_1796 putative alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D DGI_1888 putative alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D DGI_1420 putative phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D DGI_1419 putative Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:dgg00440] D DGI_0772 putative phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1] D DGI_0774 putative 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] C 00450 Selenocompound metabolism [PATH:dgg00450] D DGI_2971 putative cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D DGI_3461 acsE; putative homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D DGI_0974 putative pyridine nucleotide-disulfide oxidoreductase family protein K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D DGI_2781 putative thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D DGI_2521 trxB-2; putative thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D DGI_0460 sat; putative sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D DGI_4053 apsK; adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D DGI_2804 selD; putative Selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D DGI_1861 selA; putative L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D DGI_1734 putative methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D DGI_1912 putative serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:dgg00470] D DGI_2614 putative alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D DGI_0741 putative D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DGI_2422 putative phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D DGI_0347 putative UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D DGI_2761 putative diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D DGI_1720 putative diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D DGI_2921 hypothetical protein K21898 orr; ornithine racemase [EC:5.1.1.12] C 00480 Glutathione metabolism [PATH:dgg00480] D DGI_1154 putative leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D DGI_0424 putative Dihydropoyl dehydrogenase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D DGI_1851 icd; putative isocitrate/isopropylmalate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D DGI_1384 gnd; putative 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D DGI_1385 zwf; putative glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D DGI_0795 putative spermidine synthase with an N-terminal membrane domain K00797 speE; spermidine synthase [EC:2.5.1.16] D DGI_3135 putative spermidine synthase with an N-terminal membrane domain K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:dgg00540] D DGI_4012 kpsF; KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D DGI_4011 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D DGI_2419 putative 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D DGI_4010 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D DGI_0394 putative Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D DGI_0859 putative ADP-heptose synthase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D DGI_2271 putative D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D DGI_1330 putative rfaE bifunctional protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D DGI_0683 putative ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] C 00542 O-Antigen repeat unit biosynthesis [PATH:dgg00542] D DGI_2767 putative UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:dgg00541] D DGI_0297 putative nucleotidyl transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D DGI_2694 putative 4-diphosphocytidyl-2C-methyl-D-erythritol synthase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D DGI_0026 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D DGI_4014 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D DGI_2218 putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D DGI_0864 putative NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D DGI_1521 putative glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D DGI_0069 putative dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D DGI_1583 putative dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D DGI_0070 putative dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D DGI_1582 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D DGI_3058 hypothetical protein K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D DGI_1548 putative GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D DGI_0647 putative Bifunctional protein glmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D DGI_1401 hypothetical protein K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D DGI_1709 putative UDP-glucose 4-epimerase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-] C 00550 Peptidoglycan biosynthesis [PATH:dgg00550] D DGI_0448 putative UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D DGI_1249 putative UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D DGI_0344 putative UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D DGI_0347 putative UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D DGI_0350 putative UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D DGI_0741 putative D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DGI_0349 putative UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D DGI_3410 putative Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D DGI_0055 putative UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D DGI_0348 putative phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D DGI_0345 putative UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D DGI_0898 putative penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DGI_1270 putative penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DGI_1323 putative penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DGI_2860 putative Penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D DGI_0657 putative penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D DGI_0351 putative peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D DGI_1010 putative serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D DGI_3151 putative D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:dgg00552] D DGI_0055 putative UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D DGI_2767 putative UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:dgg00543] D DGI_2767 putative UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D DGI_1836 putative AlgI K19294 algI; alginate O-acetyltransferase complex protein AlgI D DGI_0324 putative poly(beta-D-mannuronate) O-acetyltransferase K19294 algI; alginate O-acetyltransferase complex protein AlgI D DGI_0325 hypothetical protein K19295 algJ; alginate O-acetyltransferase complex protein AlgJ D DGI_0739 cysE; putative Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:dgg00730] D DGI_1754 putative thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D DGI_0363 thiD; putative phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D DGI_2347 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DGI_2795 putative deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D DGI_1133 putative thiazole biosynthetic enzyme K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59] D DGI_2582 putative hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D DGI_2583 putative thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D DGI_1443 putative thiamin-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D DGI_2137 putative alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D DGI_2567 ak; putative Adenylate Kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:dgg00740] D DGI_1906 putative GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D DGI_1908 putative riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D DGI_1641 putative 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D DGI_1905 putative 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D DGI_1907 putative riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D DGI_1024 putative riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D DGI_2582 putative hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D DGI_1103 putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:dgg00750] D DGI_0312 putative 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D DGI_2496 putative pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D DGI_3161 putative threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:dgg00760] D DGI_1059 putative L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D DGI_2253 nadA; putative quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D DGI_2252 putative nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D DGI_3438 deoD; putative purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D DGI_2189 putative stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D DGI_0085 putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D DGI_3026 putative nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D DGI_0316 putative NH(3)-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D DGI_3034 putative damage inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D DGI_3175 putative NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D DGI_3275 putative ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:dgg00770] D DGI_3482 putative acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DGI_3507 putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D DGI_3481 putative amino acid-binding ACT domain-containing protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D DGI_3508 ilvH; putative acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D DGI_3509 ilvC; putative ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D DGI_0845 edd; putative dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D DGI_1377 putative 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D DGI_1211 putative pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D DGI_0705 putative pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D DGI_0866 coaBC; putative phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D DGI_3026 putative nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D DGI_0041 coaD; putative phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D DGI_2497 acpS; putative Holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D DGI_0204 putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DGI_0410 putative aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DGI_2538 putative aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D DGI_0746 ald; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:dgg00780] D DGI_1913 putative 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DGI_1916 putative 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DGI_0435 putative beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D DGI_3426 putative 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D DGI_4060 Glycine C-acetyltransferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D DGI_1444 putative biotin synthetase K01012 bioB; biotin synthase [EC:2.8.1.6] D DGI_3401 pycA; putative biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:dgg00785] D DGI_3073 putative lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D DGI_3074 putative lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D DGI_1688 putative FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DGI_1977 putative glycine cleavage system P-family protein K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D DGI_1976 putative glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D DGI_2296 gcvT; putative glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D DGI_1978 putative glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:dgg00790] D DGI_1805 hypothetical protein K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D DGI_1879 putative cGTP cyclohydrolase I K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D DGI_2137 putative alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D DGI_2277 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D DGI_0301 putative dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D DGI_1862 putative FolC protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D DGI_1906 putative GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D DGI_1600 putative para-aminobenzoate synthase subunit I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D DGI_0099 putative 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D DGI_0057 putative beta-lactamse domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D DGI_0284 putative RimK domain-containing protein ATP-grasp K15740 mptN; tetrahydromethanopterin:alpha-L-glutamate ligase [EC:6.3.2.33] D DGI_0763 moaA; putative molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D DGI_0268 putative molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D DGI_1520 putative molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D DGI_0644 putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D DGI_2289 putative molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D DGI_0240 putative metal dependent phosphohydrolase K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D DGI_0761 putative molybdopterin-guanine dinucleotide biosynthesis K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:dgg00670] D DGI_0702 folD; putative bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D DGI_1912 putative serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DGI_1646 putative phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D DGI_1217 putative phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D DGI_0851 putative Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D DGI_2296 gcvT; putative glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D DGI_3461 acsE; putative homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D DGI_3451 thyX; putative FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D DGI_3487 purU; putative formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D DGI_0415 metF; putative 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D DGI_1529 putative 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:dgg00860] D DGI_1837 putative glutamyl/glutaminyl-tRNA synthetase catalytic domain-containing protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DGI_3520 gltX; putative glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DGI_2564 hemA; putative glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D DGI_1394 putative glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D DGI_2629 putative Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D DGI_0396 putative porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D DGI_1647 putative uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D DGI_2562 putative siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D DGI_2627 putative transcriptional regulator K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D DGI_1391 putative heme biosynthesis protein K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D DGI_2630 putative radical SAM protein K22226 ahbC; Fe-coproporphyrin III synthase D DGI_2628 putative radical SAM domain-containing protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] D DGI_1549 putative anaerobic cobalt chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D DGI_0225 putative anaerobic cobalt chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D DGI_2351 putative precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D DGI_1396 putative precorrin-3b C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D DGI_0564 putative cobalt-precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D DGI_1395 putative cobalamin (vitamin B12) biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D DGI_0562 putative cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D DGI_0563 putative precorrin-6y C5,15-methyltransferase subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D DGI_0560 putative precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D DGI_0559 putative cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D DGI_0687 putative Dsr related protein K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D DGI_3197 putative cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D DGI_3204 cobQ; putative cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D DGI_2974 putative cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D DGI_0587 putative cobalbumin biosynthesis protein K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D DGI_1505 putative cobalamin-5-phosphate synthase CobS K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D DGI_0356 putative Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D DGI_1341 putative Histidinol-phosphate transaminase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81] D DGI_2857 bfr; putative bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:dgg00130] D DGI_1519 putative 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D DGI_1102 putative UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D DGI_1103 putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D DGI_1399 putative ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D DGI_2624 putative protein of unknown function K11782 mqnA; chorismate dehydratase [EC:4.2.1.151] D DGI_2623 putative radical SAM superfamily protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] D DGI_2625 putative amidohydrolase K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40] D DGI_2626 putative futalosine nucleosidase K11783 mqnB; futalosine hydrolase [EC:3.2.2.26] D DGI_2621 mqnD; putative 1,4-dihydroxy-6-naphthoate synthase K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:dgg00900] D DGI_2795 putative deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D DGI_3408 putative 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D DGI_2785 putative YgbB family protein K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] D DGI_3392 putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D DGI_2800 putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D DGI_1074 putative hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D DGI_1103 putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D DGI_0334 putative NUDIX hydrolase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D DGI_2796 putative geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D DGI_1402 putative Trans-hexaprenyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D DGI_3410 putative Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D DGI_0746 ald; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D DGI_1348 tkt; putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:dgg00523] D DGI_1521 putative glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D DGI_0069 putative dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D DGI_1583 putative dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D DGI_0070 putative dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics [PATH:dgg01055] D DGI_1415 putative FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D DGI_0069 putative dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:dgg00332] D DGI_0365 putative gamma-glutamyl kinase, glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D DGI_0084 putative Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:dgg00261] D DGI_1415 putative FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D DGI_0460 sat; putative sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D DGI_4053 apsK; adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D DGI_2502 putative aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DGI_0412 putative aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DGI_2763 putative dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DGI_2788 putative dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:dgg00521] D DGI_1383 gck; putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D DGI_0235 pgm; putative phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D DGI_3416 putative phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D DGI_0335 putative inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D DGI_1521 putative glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D DGI_0069 putative dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D DGI_1583 putative dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D DGI_0070 putative dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D DGI_1383 gck; putative glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:dgg00525] D DGI_1521 putative glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D DGI_0069 putative dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:dgg00401] D DGI_0596 putative prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D DGI_0878 aspB; putative aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D DGI_1654 putative Aspartate transaminase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D DGI_2466 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DGI_3030 putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D DGI_0597 putative anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D DGI_0598 putative glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D DGI_2316 putative (Acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D DGI_1916 putative 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D DGI_1915 putative acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D DGI_1209 putative S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites D DGI_2921 hypothetical protein K21898 orr; ornithine racemase [EC:5.1.1.12] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D DGI_0613 putative 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] C 00627 Aminobenzoate degradation [PATH:dgg00627] D DGI_1898 putative Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D DGI_1103 putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:dgg00625] D DGI_1047 putative Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D DGI_1044 putative Alcohol dehydrogenase, class IV K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D DGI_0746 ald; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D DGI_1276 putative nitrogenase molybdenum-iron protein beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D DGI_1280 nifH; Nitrogenase reductase K02588 nifH; nitrogenase iron protein NifH D DGI_1277 putative nitrogenase molybdenum-iron protein subunit alpha K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:dgg00633] D DGI_2741 putative 4Fe-4S ferredoxin iron-sulfur binding domain protein K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D DGI_0691 dsrA; Dissimilatory Sulfite Reductase I, chain A K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22] D DGI_0689 dsrB; Dissimilatory Sulfite Reductase I, chain B K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:dgg00626] D DGI_1047 putative Alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D DGI_1044 putative Alcohol dehydrogenase, class IV K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:dgg03020] D DGI_1776 putative DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D DGI_1779 putative DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D DGI_2807 putative DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D DGI_0266 putative DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:dgg03010] D DGI_0665 putative 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D DGI_3414 rpsB; putative 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D DGI_2827 putative 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D DGI_2808 putative 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D DGI_2816 putative 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D DGI_2615 rpsF; putative 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D DGI_2837 putative 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D DGI_2819 putative 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D DGI_3287 rpsI; putative 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D DGI_2834 hypothetical protein K02946 RP-S10; small subunit ribosomal protein S10 D DGI_2809 putative 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D DGI_2838 putative 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D DGI_2810 putative 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D DGI_2820 putative 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D DGI_1554 putative 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D DGI_3123 putative 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D DGI_2824 putative 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D DGI_2616 putative ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D DGI_2829 putative ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D DGI_2570 rpsT; putative 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D DGI_2512 rpsU; putative ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D DGI_1772 putative 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D DGI_2830 putative ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D DGI_2833 putative 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D DGI_2832 putative ribosomal protein L4/L1 family protein K02926 RP-L4; large subunit ribosomal protein L4 D DGI_2821 putative 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D DGI_2818 putative 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D DGI_1775 putative 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D DGI_2617 putative ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D DGI_1773 putative 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D DGI_1771 putative 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D DGI_3288 rplM; putative 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D DGI_2823 putative ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D DGI_2814 putative 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D DGI_2826 putative 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D DGI_2806 putative ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D DGI_2817 putative 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D DGI_3118 putative ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D DGI_1356 putative 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D DGI_0368 putative 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D DGI_2828 putative 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D DGI_2831 putative 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D DGI_2822 putative 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D DGI_3388 putative 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D DGI_0367 putative 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D DGI_1921 putative 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D DGI_2825 putative ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D DGI_2815 putative 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D DGI_1755 putative 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D DGI_1919 putative 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D DGI_1766 putative 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D DGI_2990 putative ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D DGI_1357 putative ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D DGI_2811 putative 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D DGI_1183 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DGI_1186 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DGI_1187 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:dgg00970] D DGI_2359 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DGI_3256 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DGI_3162 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DGI_1185 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DGI_0469 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DGI_1239 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DGI_1863 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DGI_3421 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DGI_3231 trnN; tRNA-Asn K14220 tRNA-Asn; tRNA Asn D DGI_0361 trnD; tRNA-Asp K14221 tRNA-Asp; tRNA Asp D DGI_1677 trnC; tRNA-Cys K14222 tRNA-Cys; tRNA Cys D DGI_1109 trnQ; tRNA-Gln K14223 tRNA-Gln; tRNA Gln D DGI_3391 trnQ; tRNA-Gln K14223 tRNA-Gln; tRNA Gln D DGI_1110 trnE; tRNA-Glu K14224 tRNA-Glu; tRNA Glu D DGI_1762 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DGI_1678 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DGI_1565 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DGI_1676 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DGI_0449 trnH; tRNA-His K14226 tRNA-His; tRNA His D DGI_1184 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile D DGI_0330 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DGI_0530 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DGI_2125 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DGI_1022 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DGI_2173 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DGI_2266 trnK; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D DGI_3170 trnK; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D DGI_0056 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met D DGI_1735 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met D DGI_2782 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met D DGI_0972 trnF; tRNA-Phe K14231 tRNA-Phe; tRNA Phe D DGI_0025 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DGI_2095 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DGI_3369 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DGI_3105 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DGI_2424 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DGI_3278 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DGI_0406 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DGI_3298 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DGI_1760 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DGI_1763 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DGI_3382 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DGI_1767 trnW; tRNA-Trp K14235 tRNA-Trp; tRNA Trp D DGI_1761 trnY; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D DGI_0068 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val D DGI_0360 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val D DGI_1361 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val D DGI_0303 trnU; tRNA-Sec K14238 tRNA-Sec; tRNA Sec D DGI_1837 putative glutamyl/glutaminyl-tRNA synthetase catalytic domain-containing protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DGI_3520 gltX; putative glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DGI_3211 gatA; putative aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D DGI_1747 putative Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D DGI_3210 gatC; putative aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D DGI_0272 putative glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D DGI_1990 putative alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D DGI_0849 aspS; putative aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D DGI_0512 putative asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D DGI_1672 putative glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D DGI_1673 putative glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D DGI_1360 putative threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D DGI_0421 putative seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D DGI_1861 selA; putative L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D DGI_3398 cysS; putative cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D DGI_1734 putative methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D DGI_0851 putative Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D DGI_1648 putative valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D DGI_1902 putative leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DGI_2774 putative isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D DGI_0430 putative Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D DGI_2317 putative arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D DGI_2799 putative prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D DGI_0847 hisS; putative histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D DGI_1355 putative phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D DGI_1354 putative phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D DGI_2287 tyrS; putative tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DGI_0446 putative tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:dgg03060] D DGI_2813 putative preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D DGI_1768 putative preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D DGI_0331 putative preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D DGI_2737 putative preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D DGI_2736 putative protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D DGI_2738 putative preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D DGI_2987 putative YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D DGI_3107 putative preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DGI_3124 putative signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D DGI_0197 putative signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D DGI_3500 putative twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D DGI_2197 tatB; putative twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB D DGI_2196 tatC; putative Sec-independent protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D DGI_1782 putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D DGI_2775 putative lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:dgg04122] D DGI_2347 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DGI_3212 trmU; putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D DGI_2706 putative Thiamine biosynthesis protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D DGI_0763 moaA; putative molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D DGI_2732 putative thiamine S protein K03636 moaD; sulfur-carrier protein D DGI_2731 putative UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D DGI_1492 putative rhodanese-like domain-containing protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D DGI_0268 putative molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D DGI_1520 putative molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] C 03050 Proteasome C 03018 RNA degradation [PATH:dgg03018] D DGI_2879 putative ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12] D DGI_0704 eno; putative phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DGI_1552 putative polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D DGI_1169 putative DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D DGI_2548 rnr; putative ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D DGI_3383 rho; putative transcription termination factor Rho K03628 rho; transcription termination factor Rho D DGI_0645 putative phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-] D DGI_1594 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D DGI_2195 pfkA; putative diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DGI_3208 dnaK; putative molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D DGI_3019 putative chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DGI_1509 putative metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:dgg03030] D DGI_0098 putative DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DGI_0203 putative DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DGI_1214 putative DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D DGI_1900 putative DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DGI_1138 putative DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DGI_2618 recQ; putative replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D DGI_2509 dnaG; putative DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D DGI_1288 putative DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D DGI_3446 putative single-strand binding protein K03111 ssb; single-strand DNA-binding protein D DGI_3133 putative ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D DGI_3117 putative Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D DGI_2789 putative DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:dgg03410] D DGI_1607 putative endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D DGI_1494 putative A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D DGI_2874 putative formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D DGI_0787 tag; putative DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D DGI_1229 putative exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D DGI_3221 recJ; putative single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DGI_2789 putative DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:dgg03420] D DGI_1666 putative transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D DGI_2171 putative excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D DGI_2792 putative excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D DGI_1468 putative excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D DGI_0535 putative ATP-dependent DNA helicase UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DGI_0482 putative uvrD/REP helicase family protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DGI_2789 putative DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:dgg03430] D DGI_1722 putative DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D DGI_2510 putative MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D DGI_0681 putative DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL D DGI_0535 putative ATP-dependent DNA helicase UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DGI_0482 putative uvrD/REP helicase family protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DGI_2798 putative exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D DGI_2797 putative exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D DGI_3221 recJ; putative single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DGI_3446 putative single-strand binding protein K03111 ssb; single-strand DNA-binding protein D DGI_0098 putative DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DGI_1138 putative DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DGI_0203 putative DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DGI_1900 putative DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DGI_1214 putative DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D DGI_2789 putative DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DGI_2361 putative D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:dgg03440] D DGI_3221 recJ; putative single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DGI_3446 putative single-strand binding protein K03111 ssb; single-strand DNA-binding protein D DGI_1670 putative DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D DGI_0201 putative recombination protein RecR K06187 recR; recombination protein RecR D DGI_1993 putative recombinase A K03553 recA; recombination protein RecA D DGI_3449 ruvA; putative Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D DGI_3450 ruvB; putative Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D DGI_3448 putative crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D DGI_1300 putative ATPase, AAA_4 family K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D DGI_2293 putative recombinase D K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D DGI_0098 putative DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DGI_1138 putative DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DGI_0203 putative DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DGI_1900 putative DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DGI_1214 putative DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D DGI_0295 putative primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:dgg02010] D DGI_0899 putative ABC transporter substrate binding protein precursor K05772 tupA; tungstate transport system substrate-binding protein D DGI_3052 putative ABC transporter periplasmic substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D DGI_0757 putative binding-protein-dependent transport systems inner membrane component K05773 tupB; tungstate transport system permease protein D DGI_0758 putative ABC transporter-like protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D DGI_2270 putative tat (twin-arginine translocation) pathway signal sequence domain protein K02020 modA; molybdate transport system substrate-binding protein D DGI_3199 putative molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D DGI_3200 putative molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein D DGI_3198 putative molybdate ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D DGI_2933 putative ABC transporter K05776 modF; molybdate transport system ATP-binding protein D DGI_0768 putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D DGI_0771 putative 2-aminoethylphosphonate ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein D DGI_0770 putative ABC-type spermidine/putrescine transport system, ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D DGI_1933 putative glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D DGI_1934 putative glycine/betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D DGI_1936 putative glycine/betaine/L-proline ABC transporter ATPase K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D DGI_1263 putative ABC transporter-like protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D DGI_1264 putative ABC transporter related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D DGI_0856 putative mammalian cell entry domain-containing protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D DGI_2322 putative mammalian cell entry domain-containing protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D DGI_0734 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D DGI_0732 putative ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D DGI_0858 putative protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D DGI_2320 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D DGI_0733 putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D DGI_0857 putative sulfate-transporting ATPase K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D DGI_2321 putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D DGI_1825 putative basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D DGI_2484 putative basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D DGI_1826 putative ABC transporter K23535 nupB; general nucleoside transport system permease protein D DGI_1827 putative ABC-type transporter, integral membrane subunit K23536 nupC; general nucleoside transport system permease protein D DGI_1829 putative ABC transporter family protein K23537 nupA; general nucleoside transport system ATP-binding protein D DGI_1800 putative phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D DGI_1884 putative ABC-type phosphate transport system K02040 pstS; phosphate transport system substrate-binding protein D DGI_2900 putative phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D DGI_1798 putative pstC1 gene product K02037 pstC; phosphate transport system permease protein D DGI_1886 putative pstC1 gene product K02037 pstC; phosphate transport system permease protein D DGI_2901 putative phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D DGI_1799 putative phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D DGI_1885 putative phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D DGI_2902 putative phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D DGI_1802 putative phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D DGI_1881 putative phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D DGI_0290 putative phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D DGI_0066 putative Lysine-arginine-ornithine-binding periplasmic protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D DGI_2207 putative Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_2245 putative ABC transporter substrate binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_1031 putative Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_1095 putative Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_3134 putative ABC transporter substrate binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_2648 putative Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_2654 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_1188 putative Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_2206 putative branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D DGI_2243 putative ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D DGI_1029 putative inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D DGI_1094 putative ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein D DGI_3136 putative inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D DGI_2647 putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D DGI_2205 putative inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D DGI_2244 putative ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D DGI_1030 putative inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D DGI_1093 putative ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein D DGI_2646 putative livM4 gene product K01998 livM; branched-chain amino acid transport system permease protein D DGI_3137 putative ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D DGI_2204 putative ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DGI_2241 putative ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DGI_1096 putative Phosphonate-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein D DGI_3138 putative ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DGI_2645 putative ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D DGI_2203 putative ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DGI_2246 putative ABC transporter-like protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DGI_1092 putative ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DGI_2644 putative ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein D DGI_3139 putative Fe(3+)-transporting ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein D DGI_2892 putative family 5 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D DGI_2891 putative binding-protein-dependent transport system inner membrane protein K13894 yejB; microcin C transport system permease protein D DGI_2890 putative ABC transporter permease K13895 yejE; microcin C transport system permease protein D DGI_2888 putative oligopeptide/dipeptide ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D DGI_2904 putative periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D DGI_2906 putative permease component of zinc ABC transporter K09816 znuB; zinc transport system permease protein D DGI_2905 putative ABC transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D DGI_1318 putative cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein D DGI_3148 putative cobalt ABC transporter permease K02008 cbiQ; cobalt/nickel transport system permease protein D DGI_3147 putative cobalt ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D DGI_0628 hypothetical protein K10094 cbiK; nickel transport protein D DGI_1316 putative Nickel uptake substrate-specific transmembrane region K10094 cbiK; nickel transport protein D DGI_1317 hypothetical protein K16915 cbiL; nickel transport protein D DGI_1445 putative BioY protein K03523 bioY; biotin transport system substrate-specific component D DGI_1486 putative ABC-type transporter, integral membrane subunit K16783 bioN; biotin transport system permease protein D DGI_0420 putative ABC transporter-like protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D DGI_0833 putative lipopolysaccharide biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein D DGI_0834 crtC; putative capsule polysaccharide export inner-membrane protein ctrC K09688 kpsM; capsular polysaccharide transport system permease protein D DGI_0835 putative cation effux pump BexA K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D DGI_4023 tagG; polysaccharide ABC transporter, permease K09690 wzm; homopolymeric O-antigen transport system permease protein D DGI_4022 tagH; polysaccharide ABC transporter, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D DGI_0431 putative lipoprotein releasing system transmembrane protein LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D DGI_0432 putative Phosphonate-transporting ATPase K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D DGI_2210 ccmC; putative cytochrome C assembly protein K02195 ccmC; heme exporter protein C D DGI_2211 ccmB; putative heme exporter protein B K02194 ccmB; heme exporter protein B D DGI_2212 ccmA; putative heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D DGI_0843 hypothetical protein K09811 ftsX; cell division transport system permease protein D DGI_0842 putative cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein C 02060 Phosphotransferase system (PTS) [PATH:dgg02060] D DGI_3112 ptsA; putative phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D DGI_3113 putative phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D DGI_2713 putative EAL domain protein K02761 celB; cellobiose PTS system EIIC component D DGI_2414 putative PTS system transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D DGI_3114 putative PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component D DGI_2416 ptsN; putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:dgg03070] D DGI_0182 putative outer membrane efflux protein K12340 tolC; outer membrane protein D DGI_4003 gspD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D D DGI_4005 gspF; type II secretion system protein K02455 gspF; general secretion pathway protein F D DGI_4073 gspG; general secretion pathway protein G K02456 gspG; general secretion pathway protein G D DGI_4002 hypothetical protein K02460 gspK; general secretion pathway protein K D DGI_4004 gspE; type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D DGI_2737 putative preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D DGI_2736 putative protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D DGI_1768 putative preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D DGI_0331 putative preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D DGI_2813 putative preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D DGI_2738 putative preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D DGI_2987 putative YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D DGI_3107 putative preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DGI_0197 putative signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D DGI_3124 putative signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D DGI_3500 putative twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D DGI_2197 tatB; putative twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB D DGI_2196 tatC; putative Sec-independent protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D DGI_0489 putative TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D DGI_2573 clpA; putative type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG B B 09132 Signal transduction C 02020 Two-component system [PATH:dgg02020] D DGI_2141 putative multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D DGI_0291 putative two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D DGI_0292 putative two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D DGI_2166 putative response regulator receiver protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D DGI_1620 phoP; putative PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D DGI_2137 putative alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D DGI_1800 putative phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D DGI_1884 putative ABC-type phosphate transport system K02040 pstS; phosphate transport system substrate-binding protein D DGI_2900 putative phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D DGI_2115 putative protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D DGI_2299 putative peptidase/PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D DGI_1374 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D DGI_0387 putative efflux transporter protein K07799 mdtA; membrane fusion protein, multidrug efflux system D DGI_0831 putative RND family efflux transporter MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D DGI_0830 putative acriflavin resistance protein K07787 cusA; copper/silver efflux system protein D DGI_2078 putative flagellin domain-containing protein K02406 fliC; flagellin D DGI_1174 hypothetical protein K02406 fliC; flagellin D DGI_0113 putative bacterial flagellin family protein K02406 fliC; flagellin D DGI_3403 putative flagellin domain-containing protein K02406 fliC; flagellin D DGI_3534 putative flagellin K02406 fliC; flagellin D DGI_1080 putative RNA polymerase sigma 28 subunit K02405 fliA; RNA polymerase sigma factor FliA D DGI_0883 putative MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D DGI_0106 putative MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D DGI_3439 motA-2; putative MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D DGI_1139 putative Chromosomal replication initiator DnaA domain-containing protein K02313 dnaA; chromosomal replication initiator protein D DGI_3452 dnaA-2; putative chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D DGI_3051 putative D-Ala-D-Ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D DGI_3253 putative Response regulator receiver domain protein K18987 irr; two-component system, OmpR family, response regulator Irr D DGI_0514 putative carbon storage regulator CsrA K03563 csrA; carbon storage regulator D DGI_1071 putative PAS domain S-box K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D DGI_2552 putative metal dependent phosphohydrolase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D DGI_2553 glnB-1; putative nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D DGI_1150 putative glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DGI_1257 putative Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DGI_0792 glnN; putative glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DGI_1208 norR2L; putative transcriptional regulator, NifA, Fis Family K02584 nifA; Nif-specific regulatory protein D DGI_0080 norR1L; putative Fis family NifA subfamily transcriptional regulator K02584 nifA; Nif-specific regulatory protein D DGI_1063 putative signal transduction histidine kinase, nitrogen specific K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D DGI_1064 putative transcriptional regulatory protein ZraR K07713 zraR; two-component system, NtrC family, response regulator HydG D DGI_1941 putative Fis family two component sigma-54 specific transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D DGI_0379 putative sensory box protein K07713 zraR; two-component system, NtrC family, response regulator HydG D DGI_1062 putative zinc-resistance associated protein K07803 zraP; zinc resistance-associated protein D DGI_1793 hypothetical protein K07803 zraP; zinc resistance-associated protein D DGI_1069 putative two component, sigma54 specific, Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D DGI_2936 putative PAS modulated sigma54 specific transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC D DGI_2418 putative RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D DGI_1943 putative CheR-type MCP methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DGI_0022 cheR; CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DGI_3470 cheR-1; putative chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DGI_3247 putative chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DGI_1244 putative MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DGI_2438 putative MCP methyltransferase/methylesterase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DGI_3352 putative PAS:CheB methylesterase:MCP methyltransferase, CheR-type K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DGI_2712 putative MCP methyltransferase/methylesterase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DGI_2263 putative methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D DGI_0986 putative chemotaxis sensory transducer protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_1240 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_1382 putative chemotaxis sensory transducer protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_1490 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_1602 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_1693 putative methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D DGI_0276 putative HAMP domain protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_0381 putative methyl-accepting chemotaxis sensory transducer protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_0398 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_0422 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_0498 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_0582 putative HAMP domain protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_0662 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_2675 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_2707 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_2714 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_2743 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_3081 mcp; putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_3084 mcp; putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_3240 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_3252 putative Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_3422 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_2605 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_1665 putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D DGI_1942 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DGI_0020 cheW; CheW K03408 cheW; purine-binding chemotaxis protein CheW D DGI_0399 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DGI_0423 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DGI_2604 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DGI_3080 cheW; putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D DGI_3083 cheW; putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D DGI_3244 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW D DGI_3251 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DGI_1143 putative chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW D DGI_1946 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_0018 cheA; CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_0401 putative chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_2994 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_2995 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_3469 cheA; putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_3078 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_3241 cheA; putative chemotaxis protein histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_3245 putative chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_1535 putative response regulator receiver protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_1233 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_1979 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_0573 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_0019 cheY; CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_0407 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_2598 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_3468 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_3057 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_3242 putative alkaline phosphatase synthesis transcriptional regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_3246 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_1947 putative response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DGI_0024 cheB; CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DGI_3471 cheB; putative response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DGI_3249 putative chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DGI_1073 putative response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D DGI_1606 putative response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D DGI_2595 putative phytochrome-like protein Cph1 family protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D DGI_0552 putative PAS/PAC sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D DGI_1256 putative response regulator receiver K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D DGI_0391 putative Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D DGI_1653 putative Fis family two component sigma-54 specific transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D DGI_1197 putative Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DGI_1604 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DGI_2853 putative PAS domain S-box protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DGI_0541 putative response regulator K15012 regA; two-component system, response regulator RegA D DGI_1252 cydA; cytochrome bd quinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D DGI_1253 cydB; cytochrome bd quinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D DGI_0182 putative outer membrane efflux protein K12340 tolC; outer membrane protein D DGI_1960 putative polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D DGI_4054 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D DGI_2951 putative polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D DGI_1441 putative PAS sensor protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D DGI_2292 putative two-component hybrid sensor and regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D DGI_1489 putative anti-sigma-28 factor, FlgM family protein K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:dgg02024] D DGI_0597 putative anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D DGI_0598 putative glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D DGI_3171 putative glycosyl transferase family protein K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-] D DGI_2975 putative antibiotic biosynthesis monooxygenase K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32] D DGI_2481 putative protein ynjB K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D DGI_2483 putative ABC-type transporter, integral membrane subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D DGI_2482 putative binding-protein-dependent transport system inner membrane protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D DGI_2479 putative Fe(3+)-transporting ATPase K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D DGI_2207 putative Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_2245 putative ABC transporter substrate binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_1031 putative Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_1095 putative Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_3134 putative ABC transporter substrate binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_2648 putative Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_2654 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_1188 putative Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_2206 putative branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D DGI_2243 putative ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D DGI_1029 putative inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D DGI_1094 putative ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein D DGI_3136 putative inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D DGI_2647 putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D DGI_2205 putative inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D DGI_2244 putative ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D DGI_1030 putative inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D DGI_1093 putative ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein D DGI_2646 putative livM4 gene product K01998 livM; branched-chain amino acid transport system permease protein D DGI_3137 putative ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D DGI_2204 putative ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DGI_2241 putative ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DGI_1096 putative Phosphonate-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein D DGI_3138 putative ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DGI_2645 putative ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D DGI_2203 putative ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DGI_2246 putative ABC transporter-like protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DGI_1092 putative ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DGI_2644 putative ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein D DGI_3139 putative Fe(3+)-transporting ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein D DGI_1809 putative beta-lactamase domain protein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81] D DGI_1876 hypothetical protein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81] D DGI_2242 putative fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DGI_3014 putative acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DGI_2476 putative Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DGI_1197 putative Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DGI_1604 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DGI_2853 putative PAS domain S-box protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DGI_1908 putative riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D DGI_1459 putative peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DGI_1458 putative ABC transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein D DGI_1457 putative binding-protein-dependent transport system inner membrane protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D DGI_1456 putative oligopeptide/dipeptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D DGI_1455 putative oligopeptide/dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D DGI_2987 putative YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D DGI_1768 putative preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D DGI_0331 putative preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D DGI_2813 putative preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D DGI_2738 putative preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D DGI_3107 putative preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DGI_0197 putative signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D DGI_3124 putative signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:dgg02030] D DGI_2263 putative methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D DGI_0986 putative chemotaxis sensory transducer protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_1240 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_1382 putative chemotaxis sensory transducer protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_1490 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_1602 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_1693 putative methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D DGI_0276 putative HAMP domain protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_0381 putative methyl-accepting chemotaxis sensory transducer protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_0398 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_0422 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_0498 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_0582 putative HAMP domain protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_0662 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_2675 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_2707 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_2714 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_2743 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_3081 mcp; putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_3084 mcp; putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_3240 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_3252 putative Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_3422 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_2605 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_1946 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_0018 cheA; CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_0401 putative chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_2994 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_2995 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_3469 cheA; putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_3078 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_3241 cheA; putative chemotaxis protein histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_3245 putative chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_1665 putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D DGI_1942 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DGI_0020 cheW; CheW K03408 cheW; purine-binding chemotaxis protein CheW D DGI_0399 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DGI_0423 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DGI_2604 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DGI_3080 cheW; putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D DGI_3083 cheW; putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D DGI_3244 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW D DGI_3251 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DGI_1143 putative chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW D DGI_1535 putative response regulator receiver protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_1233 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_1979 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_0573 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_0019 cheY; CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_0407 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_2598 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_3468 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_3057 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_3242 putative alkaline phosphatase synthesis transcriptional regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_3246 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_0821 cheC; putative CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D DGI_2780 putative chemotaxis protein K03414 cheZ; chemotaxis protein CheZ D DGI_1231 putative CheC domain protein K03409 cheX; chemotaxis protein CheX D DGI_2979 putative CheC domain protein K03409 cheX; chemotaxis protein CheX D DGI_1947 putative response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DGI_0024 cheB; CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DGI_3471 cheB; putative response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DGI_3249 putative chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DGI_1244 putative MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DGI_2438 putative MCP methyltransferase/methylesterase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DGI_3352 putative PAS:CheB methylesterase:MCP methyltransferase, CheR-type K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DGI_2712 putative MCP methyltransferase/methylesterase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DGI_1073 putative response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D DGI_1606 putative response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D DGI_1950 putative CheD family protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D DGI_2597 putative CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D DGI_2639 putative CheD-like chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D DGI_3271 putative MCP proteins methylation stimulator CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D DGI_3056 putative chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D DGI_3250 putative chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D DGI_1943 putative CheR-type MCP methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DGI_0022 cheR; CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DGI_3470 cheR-1; putative chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DGI_3247 putative chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DGI_0504 putative flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D DGI_1925 putative flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D DGI_0887 fliN; putative flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D DGI_0883 putative MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D DGI_0106 putative MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D DGI_3439 motA-2; putative MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D DGI_0884 putative OmpA/MotB domain-containing protein K02557 motB; chemotaxis protein MotB D DGI_0885 putative OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D DGI_0107 putative OmpA/MotB domain-containing protein K02557 motB; chemotaxis protein MotB D DGI_2609 putative OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D DGI_3440 putative OmpA/MotB domain-containing protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:dgg02040] D DGI_0506 fliE; putative flagellar basal body component FliE K02408 fliE; flagellar hook-basal body complex protein FliE D DGI_0505 fliF; putative flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D DGI_0504 putative flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D DGI_0503 hypothetical protein K02411 fliH; flagellar assembly protein FliH D DGI_0502 putative flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D DGI_1177 putative flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D DGI_0110 putative Flagellar hook-length control protein-like protein K02414 fliK; flagellar hook-length control protein FliK D DGI_0886 putative flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D DGI_1079 putative flagellar basal body protein K02415 fliL; flagellar protein FliL D DGI_1925 putative flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D DGI_0887 fliN; putative flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D DGI_0888 putative flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D DGI_0889 fliP; putative flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP D DGI_0890 fliQ; putative flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D DGI_1085 putative flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D DGI_1083 putative flagellar biosynthesis protein K02400 flhA; flagellar biosynthesis protein FlhA D DGI_1084 putative flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D DGI_0521 putative FlgA family protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D DGI_0508 flgB; putative flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D DGI_0507 flgC; putative flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D DGI_0111 putative basal-body rod modification protein FlgD, flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D DGI_1629 putative flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D DGI_0112 putative flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D DGI_0523 putative flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF D DGI_0522 putative flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D DGI_0520 putative flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D DGI_0519 putative flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI D DGI_0518 putative peptidase M23 K02395 flgJ; peptidoglycan hydrolase FlgJ D DGI_0516 putative flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D DGI_0515 putative flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D DGI_2078 putative flagellin domain-containing protein K02406 fliC; flagellin D DGI_1174 hypothetical protein K02406 fliC; flagellin D DGI_0113 putative bacterial flagellin family protein K02406 fliC; flagellin D DGI_3403 putative flagellin domain-containing protein K02406 fliC; flagellin D DGI_3534 putative flagellin K02406 fliC; flagellin D DGI_3404 putative flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2 D DGI_3405 putative flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D DGI_0883 putative MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D DGI_0106 putative MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D DGI_3439 motA-2; putative MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D DGI_0884 putative OmpA/MotB domain-containing protein K02557 motB; chemotaxis protein MotB D DGI_0885 putative OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D DGI_0107 putative OmpA/MotB domain-containing protein K02557 motB; chemotaxis protein MotB D DGI_2609 putative OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D DGI_3440 putative OmpA/MotB domain-containing protein K02557 motB; chemotaxis protein MotB D DGI_1489 putative anti-sigma-28 factor, FlgM family protein K02398 flgM; negative regulator of flagellin synthesis FlgM D DGI_2507 rpoD; putative RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor D DGI_0391 putative Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D DGI_2418 putative RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D DGI_1653 putative Fis family two component sigma-54 specific transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D DGI_1080 putative RNA polymerase sigma 28 subunit K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D DGI_0704 eno; putative phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D DGI_3461 acsE; putative homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:dgg01501] D DGI_3098 putative Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D DGI_0551 putative efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D DGI_0467 putative acrA Membrane Fusion Protein K03585 acrA; membrane fusion protein, multidrug efflux system D DGI_0468 putative acrB RND-type permease K18138 acrB; multidrug efflux pump D DGI_0182 putative outer membrane efflux protein K12340 tolC; outer membrane protein D DGI_0898 putative penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DGI_1270 putative penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DGI_1323 putative penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DGI_0657 putative penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D DGI_0351 putative peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D DGI_2558 putative class D beta-lactamase precursor K17838 oxa; beta-lactamase class D [EC:3.5.2.6] C 01502 Vancomycin resistance [PATH:dgg01502] D DGI_3051 putative D-Ala-D-Ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D DGI_0741 putative D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DGI_2614 putative alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D DGI_0349 putative UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D DGI_0348 putative phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D DGI_0345 putative UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:dgg01503] D DGI_0671 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DGI_2115 putative protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D DGI_2299 putative peptidase/PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D DGI_1374 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D DGI_0551 putative efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D DGI_0467 putative acrA Membrane Fusion Protein K03585 acrA; membrane fusion protein, multidrug efflux system D DGI_0468 putative acrB RND-type permease K18138 acrB; multidrug efflux pump D DGI_0182 putative outer membrane efflux protein K12340 tolC; outer membrane protein B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:dgg01000] C 01001 Protein kinases [BR:dgg01001] D DGI_0977 putative cyclic nucleotide-binding protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D DGI_2953 putative serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D DGI_0685 putative serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D DGI_3338 putative HipA N-terminal domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D DGI_3237 putative anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D DGI_2996 putative anti-sigma factor antagonist family protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D DGI_2222 putative ATPase ATP-binding domain-containing protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D DGI_0102 putative ATP-binding region ATPase domain protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D DGI_0754 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D DGI_2914 putative sigma factor serine-protein kinase family protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D DGI_2952 putative polysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D DGI_2141 putative multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D DGI_0291 putative two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D DGI_0578 putative two component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D DGI_1071 putative PAS domain S-box K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D DGI_1145 putative regulatory protein LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D DGI_1063 putative signal transduction histidine kinase, nitrogen specific K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D DGI_0544 putative histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DGI_3043 putative integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DGI_0143 putative PAS/PAC sensor signal transduction histine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DGI_1405 putative PAS/PAC sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DGI_2940 putative multi-sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DGI_3045 putative integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DGI_1946 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_0018 cheA; CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_0401 putative chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_2994 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_2995 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_3469 cheA; putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_3078 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_3241 cheA; putative chemotaxis protein histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_3245 putative chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_2595 putative phytochrome-like protein Cph1 family protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D DGI_0552 putative PAS/PAC sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D DGI_1256 putative response regulator receiver K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D DGI_1441 putative PAS sensor protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D DGI_2292 putative two-component hybrid sensor and regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D DGI_0984 putative multi-sensor hybrid histidine kinase K20972 retS; two-component system, sensor histidine kinase RetS D DGI_0815 putative two-component hybrid sensor and regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D DGI_0817 putative two-component hybrid sensor and regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D DGI_1313 putative Hpt sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D DGI_2965 putative PAS sensor protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:dgg01009] D DGI_1104 putative S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D DGI_2195 pfkA; putative diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DGI_1541 putative protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D DGI_1540 hypothetical protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D DGI_3003 putative protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D DGI_2923 putative protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D DGI_0146 putative phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:dgg01002] D DGI_2775 putative lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D DGI_0188 putative peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D DGI_2260 hynC; hynC K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D DGI_2198 quaA; putative GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D DGI_2118 putative NLP/P60 protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D DGI_0191 putative amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D DGI_0670 glmS; putative glucosamine/fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DGI_1613 asn; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D DGI_0259 putative asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D DGI_4019 asnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D DGI_2608 putative intracellular protease, PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124] D DGI_2158 putative ErfK/YbiS/YcfS/YnhG family protein K19234 ynhG; L,D-transpeptidase YnhG D DGI_0294 putative oligoendopeptidase, pepF/M3 family K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D DGI_3051 putative D-Ala-D-Ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D DGI_1149 putative peptidoglycan-binding domain 1 protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-] D DGI_1628 putative peptidase M16C K06972 PITRM1; presequence protease [EC:3.4.24.-] D DGI_0226 putative peptidase M16 domain-containing protein K07263 pqqL; zinc protease [EC:3.4.24.-] D DGI_1154 putative leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D DGI_2750 putative acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D DGI_2812 putative methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D DGI_0780 putative peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D DGI_2620 putative peptidase M29 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-] D DGI_1611 putative Carboxypeptidase Taq K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D DGI_0302 putative cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DGI_0609 putative ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DGI_1953 putative peptidase M48 Ste24p K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D DGI_3407 putative membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D DGI_1524 hypothetical protein K23743 E3.4.24.33; peptidyl-Asp metalloendopeptidase [EC:3.4.24.33] D DGI_2115 putative protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D DGI_2299 putative peptidase/PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D DGI_1374 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D DGI_1010 putative serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D DGI_3151 putative D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D DGI_2127 clpP; putative ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D DGI_2130 putative anti-sigma H sporulation factor, LonB K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D DGI_1895 putative anti-sigma H sporulation factor LonB K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D DGI_0474 umuD; putative UmuD protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D DGI_1782 putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D DGI_2726 putative carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D DGI_0664 putative signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D DGI_2899 putative rhomboid family protein K07059 K07059; rhomboid family protein D DGI_3393 putative ATP-dependent protease HslVU K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D DGI_2636 putative peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D DGI_2555 putative peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D DGI_2861 putative alpha-2-macroglobulin domain protein 2 K06894 yfhM; alpha-2-macroglobulin D DGI_1589 putative HflC protein K04087 hflC; modulator of FtsH protease HflC D DGI_1591 putative HflK protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:dgg01003] D DGI_2231 putative glycosyl transferase group 1 K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D DGI_1178 hypothetical protein K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80] D DGI_2305 putative glycogen/starch synthase K00703 glgA; starch synthase [EC:2.4.1.21] D DGI_2860 putative Penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D DGI_0898 putative penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DGI_1270 putative penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DGI_1323 putative penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DGI_3171 putative glycosyl transferase family protein K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-] D DGI_2767 putative UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D DGI_0384 putative glycosyl transferase family 2 K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D DGI_3357 hypothetical protein K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397] D DGI_0752 putative Alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] C 01005 Lipopolysaccharide biosynthesis proteins [BR:dgg01005] D DGI_4011 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D DGI_4010 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D DGI_2419 putative 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D DGI_4012 kpsF; KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D DGI_0859 putative ADP-heptose synthase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D DGI_1330 putative rfaE bifunctional protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D DGI_0394 putative Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D DGI_2271 putative D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D DGI_0683 putative ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D DGI_1410 putative glycosyl transferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D DGI_2917 putative glycosyl transferase family protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D DGI_2767 putative UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:dgg01011] D DGI_0448 putative UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D DGI_1249 putative UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D DGI_0344 putative UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D DGI_0347 putative UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D DGI_0350 putative UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D DGI_0741 putative D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DGI_2614 putative alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D DGI_0348 putative phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D DGI_0345 putative UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D DGI_0055 putative UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D DGI_1338 putative uncharacterized membrane protein, putative virulence factor K03980 murJ; putative peptidoglycan lipid II flippase D DGI_0450 putative integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D DGI_2884 putative virulence factor MVIN family protein K03980 murJ; putative peptidoglycan lipid II flippase D DGI_0898 putative penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DGI_1270 putative penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DGI_1323 putative penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D DGI_2860 putative Penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D DGI_0657 putative penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D DGI_0351 putative peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D DGI_1010 putative serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D DGI_3151 putative D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D DGI_2158 putative ErfK/YbiS/YcfS/YnhG family protein K19234 ynhG; L,D-transpeptidase YnhG D DGI_3051 putative D-Ala-D-Ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D DGI_2118 putative NLP/P60 protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D DGI_1149 putative peptidoglycan-binding domain 1 protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-] D DGI_3102 putative membrane-bound lytic murein transglycosylase K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D DGI_0808 putative membrane-bound lytic murein transglycosylase B-like protein K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D DGI_3094 putative Peptidoglycan-binding domain 1 protein K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D DGI_3093 putative lytic transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D DGI_0892 putative lysM domain protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D DGI_1346 putative aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D DGI_1363 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D DGI_0639 putative rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D DGI_0671 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:dgg01004] D DGI_2316 putative (Acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D DGI_1917 putative 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DGI_1913 putative 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DGI_1916 putative 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DGI_0435 putative beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D DGI_0538 putative G-D-S-L family lipolytic protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D DGI_1438 putative acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DGI_1737 putative acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DGI_0581 putative acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D DGI_2242 putative fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DGI_3014 putative acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DGI_2476 putative Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DGI_1918 putative fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D DGI_1219 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D DGI_1595 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:dgg01008] D DGI_1415 putative FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] C 01006 Prenyltransferases [BR:dgg01006] D DGI_2796 putative geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D DGI_1402 putative Trans-hexaprenyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D DGI_3410 putative Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D DGI_0040 miaA; putative tRNA delta (2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D DGI_1519 putative 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:dgg01007] D DGI_1837 putative glutamyl/glutaminyl-tRNA synthetase catalytic domain-containing protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DGI_3520 gltX; putative glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DGI_0272 putative glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D DGI_2287 tyrS; putative tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DGI_0446 putative tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D DGI_3398 cysS; putative cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D DGI_2317 putative arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D DGI_1734 putative methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D DGI_2774 putative isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D DGI_1648 putative valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D DGI_1902 putative leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DGI_0430 putative Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D DGI_0849 aspS; putative aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D DGI_0512 putative asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D DGI_0847 hisS; putative histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D DGI_1672 putative glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D DGI_1673 putative glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D DGI_0421 putative seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D DGI_2799 putative prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D DGI_1360 putative threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D DGI_1990 putative alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D DGI_1355 putative phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D DGI_1354 putative phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D DGI_0878 aspB; putative aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D DGI_1654 putative Aspartate transaminase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D DGI_2695 putative LL-diaminopimelate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D DGI_2278 putative LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D DGI_2466 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DGI_3030 putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D DGI_3426 putative 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D DGI_4060 Glycine C-acetyltransferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D DGI_2155 putative acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D DGI_1394 putative glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D DGI_0204 putative branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DGI_0410 putative aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D DGI_1600 putative para-aminobenzoate synthase subunit I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D DGI_0774 putative 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:dgg00194] D DGI_0648 atpC; putative F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D DGI_0649 atpD; putative ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D DGI_0650 atpG; putative F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D DGI_0651 atpA; putative F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D DGI_0652 atpH; putative F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D DGI_0653 atpF; putative H+transporting two-sector ATPase subunit B/B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b D DGI_0654 atpF1; putative H+-transporting two-sector ATPase subunit B/B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b D DGI_1502 atpE; putative ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D DGI_1501 atpB; putative ATP synthase F0 subunit alpha K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:dgg03000] D DGI_0935 putative cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DGI_2020 putative DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DGI_2028 putative DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DGI_0478 putative DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DGI_1040 putative AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator D DGI_2692 putative transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D DGI_0388 putative TetR family transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D DGI_2492 putative TetR family transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D DGI_1988 putative transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DGI_2704 hypothetical protein K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D DGI_2600 mtsB; putative cobalamin B12-binding domain-containing protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D DGI_1605 putative Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D DGI_2907 putative ferric-uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D DGI_0991 putative Fur family ferric uptake regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D DGI_0749 putative ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D DGI_1197 putative Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DGI_1604 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DGI_2853 putative PAS domain S-box protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D DGI_1495 putative cAMP-binding protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D DGI_3401 pycA; putative biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D DGI_3339 putative helix-hairpin-helix DNA-binding motif-containing protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D DGI_0915 putative CI repressor K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor D DGI_0391 putative Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D DGI_1702 putative PAS modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D DGI_0546 putative sigma54 specific transcriptional regulator K11914 sfa2; sigma-54 dependent transcriptional regulator D DGI_1208 norR2L; putative transcriptional regulator, NifA, Fis Family K02584 nifA; Nif-specific regulatory protein D DGI_0080 norR1L; putative Fis family NifA subfamily transcriptional regulator K02584 nifA; Nif-specific regulatory protein D DGI_1373 putative molybdenum-pterin binding domain protein K02019 modE; molybdate transport system regulatory protein D DGI_0756 putative ModE family transcriptional regulator K02019 modE; molybdate transport system regulatory protein D DGI_3332 putative ModE family transcriptional regulator K02019 modE; molybdate transport system regulatory protein D DGI_1503 putative redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D DGI_1283 hypothetical protein K07727 K07727; putative transcriptional regulator D DGI_3182 nikR; putative nickel responsive regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D DGI_1989 putative delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D DGI_2075 putative ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DGI_0860 putative parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DGI_3386 putative CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D DGI_1482 putative Fis family sigma-54 specific transcriptional activator K03974 pspF; psp operon transcriptional activator D DGI_1485 putative phage shock protein K03973 pspC; phage shock protein C D DGI_2357 putative Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D DGI_1517 putative prokaryotic dksA/traR C4-type zinc finger family protein K06204 dksA; RNA polymerase-binding transcription factor D DGI_3001 putative TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D DGI_2855 putative RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D DGI_0354 putative cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:dgg03021] D DGI_2807 putative DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D DGI_1776 putative DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D DGI_1779 putative DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D DGI_0266 putative DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D DGI_2507 rpoD; putative RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor D DGI_3460 putative RNA polymerase, sigma 70 family subunit K03089 rpoH; RNA polymerase sigma-32 factor D DGI_2418 putative RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D DGI_1080 putative RNA polymerase sigma 28 subunit K02405 fliA; RNA polymerase sigma factor FliA D DGI_1563 putative transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D DGI_1904 putative NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D DGI_1769 putative NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D DGI_3237 putative anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D DGI_3238 putative negative regulator of sigma-B K17762 rsbS; rsbT antagonist protein RsbS D DGI_3239 putative Sulfate transporter/antisigma-factor antagonist STAS K17763 rsbR; rsbT co-antagonist protein RsbR D DGI_1250 putative HAMP domain protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D DGI_0101 putative response regulator receiver protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D DGI_2997 putative response regulator receiver modulated serine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D DGI_2922 putative regulator K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D DGI_1003 putative protein serine/threonine phosphatase with PAS/PAC(s) sensor K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D DGI_2993 putative cyclic nucleotide-binding protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D DGI_2221 putative anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist D DGI_1198 putative anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist D DGI_3222 putative anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist D DGI_0103 putative anti-anti-sigma-factor K04749 rsbV; anti-sigma B factor antagonist D DGI_1949 putative anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist D DGI_0755 putative anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist D DGI_0104 putative anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist D DGI_2996 putative anti-sigma factor antagonist family protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D DGI_2222 putative ATPase ATP-binding domain-containing protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D DGI_0102 putative ATP-binding region ATPase domain protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D DGI_0754 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D DGI_2914 putative sigma factor serine-protein kinase family protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D DGI_1517 putative prokaryotic dksA/traR C4-type zinc finger family protein K06204 dksA; RNA polymerase-binding transcription factor D DGI_3001 putative TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D DGI_2855 putative RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D DGI_0989 greA; putative GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA D DGI_3383 rho; putative transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:dgg03019] D DGI_1634 putative NHL repeat containing protein K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] D DGI_0529 putative PKD domain-containing protein K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] D DGI_2879 putative ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12] D DGI_0117 rnc; putative ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D DGI_1594 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D DGI_0645 putative phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-] D DGI_2548 rnr; putative ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D DGI_2190 putative metal dependent phosphohydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D DGI_1169 putative DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D DGI_0704 eno; putative phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DGI_1552 putative polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D DGI_3383 rho; putative transcription termination factor Rho K03628 rho; transcription termination factor Rho D DGI_2195 pfkA; putative diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DGI_3208 dnaK; putative molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D DGI_3019 putative chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DGI_1509 putative metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D DGI_0514 putative carbon storage regulator CsrA K03563 csrA; carbon storage regulator D DGI_2415 hypothetical protein K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:dgg03011] D DGI_0665 putative 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D DGI_3414 rpsB; putative 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D DGI_2827 putative 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D DGI_2808 putative 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D DGI_2816 putative 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D DGI_2615 rpsF; putative 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D DGI_2837 putative 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D DGI_2819 putative 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D DGI_3287 rpsI; putative 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D DGI_2834 hypothetical protein K02946 RP-S10; small subunit ribosomal protein S10 D DGI_2809 putative 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D DGI_2838 putative 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D DGI_2810 putative 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D DGI_2820 putative 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D DGI_1554 putative 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D DGI_3123 putative 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D DGI_2824 putative 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D DGI_2616 putative ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D DGI_2829 putative ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D DGI_2570 rpsT; putative 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D DGI_2512 rpsU; putative ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D DGI_1772 putative 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D DGI_2830 putative ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D DGI_2833 putative 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D DGI_2832 putative ribosomal protein L4/L1 family protein K02926 RP-L4; large subunit ribosomal protein L4 D DGI_2821 putative 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D DGI_2818 putative 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D DGI_2617 putative ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D DGI_1773 putative 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D DGI_1771 putative 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D DGI_1775 putative 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D DGI_3288 rplM; putative 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D DGI_2823 putative ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D DGI_2814 putative 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D DGI_2826 putative 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D DGI_2806 putative ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D DGI_2817 putative 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D DGI_3118 putative ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D DGI_1356 putative 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D DGI_0368 putative 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D DGI_2828 putative 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D DGI_2831 putative 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D DGI_2822 putative 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D DGI_0367 putative 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D DGI_1921 putative 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D DGI_2825 putative ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D DGI_2815 putative 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D DGI_1755 putative 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D DGI_1919 putative 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D DGI_1766 putative 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D DGI_2990 putative ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D DGI_1357 putative ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D DGI_2811 putative 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D DGI_3388 putative 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D DGI_1187 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DGI_1183 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DGI_1186 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:dgg03009] D DGI_0117 rnc; putative ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D DGI_0880 era; putative GTP-binding protein Era K03595 era; GTPase D DGI_0366 putative GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D DGI_1517 putative prokaryotic dksA/traR C4-type zinc finger family protein K06204 dksA; RNA polymerase-binding transcription factor D DGI_3001 putative TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D DGI_2855 putative RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D DGI_1563 putative transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D DGI_1904 putative NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D DGI_1769 putative NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D DGI_2515 putative dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D DGI_0853 putative Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D DGI_0042 putative N6-adenine-specific methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D DGI_2297 putative RNA methyltransferase family protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D DGI_2315 putative Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D DGI_0353 putative Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D DGI_3115 putative Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D DGI_0701 putative hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D DGI_0891 putative TrmH family RNA methyltransferase, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D DGI_2701 putative ribosomal RNA methyltransferase RrmJ/FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D DGI_2310 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D DGI_0584 putative ribosomal RNA methyltransferase RrmJ/FtsJ K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D DGI_1510 putative 23S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D DGI_1523 putative RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D DGI_0048 putative rRNA pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D DGI_1032 putative pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D DGI_0839 putative pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D DGI_2898 putative dephospho-CoA kinase / ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D DGI_0333 putative ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D DGI_3121 putative 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D DGI_0666 putative MiaB-like tRNA modifying protein YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D DGI_1680 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D DGI_2729 putative ribosomal L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D DGI_2879 putative ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12] D DGI_1345 putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D DGI_1740 putative GTP-binding protein EngA K03977 engA; GTPase D DGI_0511 putative GTP-binding protein HflX K03665 hflX; GTPase D DGI_2309 putative SUA5/yciO/yrdC domain-containing protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D DGI_2687 putative (p)ppGpp synthetase I SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D DGI_1557 putative ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D DGI_1564 hypothetical protein K09748 rimP; ribosome maturation factor RimP D DGI_3491 putative iojap family protein K09710 ybeB; ribosome-associated protein D DGI_2719 hypothetical protein K07042 ybeY; probable rRNA maturation factor D DGI_2417 putative sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor D DGI_0231 putative GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D DGI_1920 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:dgg03016] D DGI_2281 putative polymerase family protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D DGI_3400 putative polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D DGI_0981 rtcB; putative cytoplasmic protein RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D DGI_1837 putative glutamyl/glutaminyl-tRNA synthetase catalytic domain-containing protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DGI_3520 gltX; putative glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DGI_2799 putative prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D DGI_2774 putative isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D DGI_1902 putative leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DGI_1734 putative methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D DGI_0272 putative glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D DGI_2317 putative arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D DGI_0430 putative Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D DGI_0849 aspS; putative aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D DGI_1990 putative alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D DGI_0512 putative asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D DGI_1360 putative threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D DGI_0421 putative seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D DGI_3398 cysS; putative cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D DGI_1648 putative valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D DGI_0847 hisS; putative histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D DGI_1355 putative phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D DGI_1354 putative phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D DGI_2287 tyrS; putative tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DGI_0446 putative tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D DGI_0100 putative D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D DGI_0637 putative histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D DGI_2877 putative tRNA (adenine-N(1)-)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D DGI_1307 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D DGI_1973 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D DGI_1175 putative tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D DGI_1555 putative tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D DGI_2347 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DGI_2309 putative SUA5/yciO/yrdC domain-containing protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D DGI_0040 miaA; putative tRNA delta (2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D DGI_2985 putative tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D DGI_2751 putative tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D DGI_2804 selD; putative Selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D DGI_1852 putative 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D DGI_2989 putative Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D DGI_1218 putative ribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D DGI_3033 putative 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D DGI_1672 putative glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D DGI_1673 putative glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D DGI_1075 putative dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D DGI_1832 putative RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D DGI_3213 putative RNA modification enzyme, MiaB family protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D DGI_4006 Methyltransferase type 11 K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D DGI_0192 putative RNA methyltransferase, TrmH family, group 1 K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D DGI_2658 putative Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D DGI_3119 putative tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D DGI_2841 putative tRNA guanosine-2'-O-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D DGI_0293 putative tRNA/rRNA methyltransferase SpoU K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D DGI_1849 putative methyltransferase small K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D DGI_1027 putative NOL1/NOP2/sun family protein K22446 K22446; tRNA (cytosine49-C5)-methyltransferase [EC:2.1.1.-] D DGI_3212 trmU; putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D DGI_2706 putative Thiamine biosynthesis protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D DGI_0441 hypothetical protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15] D DGI_0261 putative PP-loop domain protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D DGI_1002 putative HesB/YadR/YfhF-family protein K13628 iscA; iron-sulfur cluster assembly protein D DGI_0868 queA; putative S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D DGI_0099 putative 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D DGI_2880 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D DGI_1636 putative queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D DGI_2566 putative tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D DGI_3406 putative peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D DGI_2523 putative glycoprotease family metalloendopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D DGI_2500 putative ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D DGI_2548 rnr; putative ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D DGI_1552 putative polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:dgg03012] D DGI_1559 putative translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D DGI_1359 putative translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D DGI_3259 putative ABC transporter family protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D DGI_3413 tsf; putative Elongation factor Ts K02357 tsf; elongation factor Ts D DGI_1765 putative translation elongation factor Tu K02358 tuf; elongation factor Tu D DGI_1597 putative elongation factor G K02355 fusA; elongation factor G D DGI_2518 fusA-2; putative translation elongation factor G K02355 fusA; elongation factor G D DGI_2835 fusA; putative elongation factor G K02355 fusA; elongation factor G D DGI_1858 selB; putative selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor D DGI_1758 putative peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D DGI_3411 frr; putative ribosome recycling factor K02838 frr; ribosome recycling factor D DGI_1759 putative protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D DGI_3387 pth; putative peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D DGI_0726 infA; putative translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D DGI_0051 putative translation elongation factor P K02356 efp; elongation factor P D DGI_2755 putative peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D DGI_2984 putative peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D DGI_0031 putative Class I peptide chain release factor K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:dgg03110] D DGI_3476 clpA; putative ATP-dependent Clp protease, ATP-binding subunit clpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D DGI_2703 putative ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D DGI_2128 clpX; putative ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D DGI_1586 putative ATPase K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D DGI_2114 putative ATP-dependent protease HslVU, ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D DGI_3208 dnaK; putative molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D DGI_3019 putative chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DGI_0267 putative chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D DGI_2705 putative chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein D DGI_3206 putative GrpE protein HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE D DGI_2677 putative heat shock protein K13993 HSP20; HSP20 family protein D DGI_3068 putative heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D DGI_3069 putative heat shock protein Hsp20 family protein K13993 HSP20; HSP20 family protein D DGI_3023 putative 10 kDa chaperonin K04078 groES; chaperonin GroES D DGI_2115 putative protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D DGI_2299 putative peptidase/PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D DGI_1374 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D DGI_0302 putative cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DGI_0609 putative ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DGI_1501 atpB; putative ATP synthase F0 subunit alpha K02108 ATPF0A; F-type H+-transporting ATPase subunit a D DGI_1062 putative zinc-resistance associated protein K07803 zraP; zinc resistance-associated protein D DGI_1793 hypothetical protein K07803 zraP; zinc resistance-associated protein D DGI_2239 hypA; putative hydrogenase nickel incorporation protein hypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D DGI_2238 hypB; putative hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D DGI_2649 putative Peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D DGI_0464 putative PPIC-type PPIASE domain protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D DGI_1668 putative SurA domain protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D DGI_0606 putative thioredoxin K03671 TXN; thioredoxin D DGI_2522 trxA; putative thioredoxin K03671 TXN; thioredoxin D DGI_2536 putative thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:dgg04131] D DGI_2724 putative Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D DGI_2188 gap; putative type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DGI_2546 gap1; putative glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DGI_1753 gpmA; putative phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D DGI_0179 pyk; putative pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D DGI_2475 putative major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:dgg04121] D DGI_1634 putative NHL repeat containing protein K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] D DGI_0529 putative PKD domain-containing protein K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] C 03051 Proteasome C 03032 DNA replication proteins [BR:dgg03032] D DGI_3133 putative ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D DGI_0935 putative cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DGI_2020 putative DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DGI_2028 putative DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DGI_0478 putative DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DGI_0924 putative histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D DGI_2514 hup-3; putative histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D DGI_2398 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D DGI_0638 hup-1; putative histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D DGI_2758 putative DNA-binding protein HU subunit beta K05788 ihfB; integration host factor subunit beta D DGI_1139 putative Chromosomal replication initiator DnaA domain-containing protein K02313 dnaA; chromosomal replication initiator protein D DGI_3452 dnaA-2; putative chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D DGI_2618 recQ; putative replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D DGI_2509 dnaG; putative DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D DGI_1288 putative DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D DGI_3446 putative single-strand binding protein K03111 ssb; single-strand DNA-binding protein D DGI_0098 putative DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DGI_1138 putative DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DGI_1900 putative DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DGI_1214 putative DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D DGI_0203 putative DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DGI_3117 putative Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D DGI_2789 putative DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DGI_2361 putative D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D DGI_1135 putative DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D DGI_1137 putative DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D DGI_1131 putative DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:dgg03036] D DGI_0935 putative cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DGI_2020 putative DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DGI_2028 putative DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DGI_0478 putative DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DGI_0117 rnc; putative ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D DGI_0924 putative histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D DGI_2514 hup-3; putative histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D DGI_2398 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D DGI_0638 hup-1; putative histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D DGI_2758 putative DNA-binding protein HU subunit beta K05788 ihfB; integration host factor subunit beta D DGI_2705 putative chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein D DGI_1139 putative Chromosomal replication initiator DnaA domain-containing protein K02313 dnaA; chromosomal replication initiator protein D DGI_3452 dnaA-2; putative chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D DGI_1988 putative transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D DGI_0341 putative cell division protein FtsA K03590 ftsA; cell division protein FtsA D DGI_2528 putative septum formation initiator family K05589 ftsB; cell division protein FtsB D DGI_0842 putative cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D DGI_0351 putative peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D DGI_0050 ftsK; putative membrane protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D DGI_0342 putative POTRA domain, FtsQ-type family protein K03589 ftsQ; cell division protein FtsQ D DGI_0346 putative cell division protein FtsW K03588 ftsW; cell division protein FtsW D DGI_0843 hypothetical protein K09811 ftsX; cell division transport system permease protein D DGI_0339 putative cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D DGI_0671 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DGI_0551 putative efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D DGI_0467 putative acrA Membrane Fusion Protein K03585 acrA; membrane fusion protein, multidrug efflux system D DGI_3156 minC; putative septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D DGI_3157 minD; putative septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D DGI_3158 minE; putative cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D DGI_2254 putative rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D DGI_0660 putative rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D DGI_0336 putative rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D DGI_0659 putative rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D DGI_0656 putative rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D DGI_1617 soj; putative Soj K03496 parA; chromosome partitioning protein D DGI_0021 parA; ParA family protein K03496 parA; chromosome partitioning protein D DGI_0862 putative cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D DGI_3097 putative Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D DGI_3099 putative chromosomal partitioning ATPase ParA K03496 parA; chromosome partitioning protein D DGI_4025 soj; Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D DGI_3343 hypothetical protein K03496 parA; chromosome partitioning protein D DGI_2075 putative ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DGI_0860 putative parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DGI_2751 putative tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D DGI_2315 putative Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D DGI_2658 putative Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D DGI_0010 putative integrase family protein K03733 xerC; integrase/recombinase XerC D DGI_2280 putative tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D DGI_2531 putative Mrp protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D DGI_0484 putative filamentation induced by cAMP protein fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D DGI_3128 putative Filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D DGI_0053 putative ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:dgg03400] D DGI_0663 putative methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D DGI_1213 putative deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D DGI_1494 putative A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D DGI_1607 putative endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D DGI_0416 putative NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D DGI_2306 putative NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D DGI_2154 putative deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D DGI_0787 tag; putative DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D DGI_2874 putative formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D DGI_1229 putative exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D DGI_3221 recJ; putative single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DGI_2789 putative DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DGI_2171 putative excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D DGI_2792 putative excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D DGI_1468 putative excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D DGI_0535 putative ATP-dependent DNA helicase UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DGI_0482 putative uvrD/REP helicase family protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DGI_1776 putative DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D DGI_1779 putative DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D DGI_2807 putative DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D DGI_0266 putative DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D DGI_1666 putative transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D DGI_1722 putative DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D DGI_2510 putative MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D DGI_0681 putative DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL D DGI_2798 putative exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D DGI_2797 putative exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D DGI_0098 putative DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DGI_1138 putative DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DGI_1900 putative DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DGI_1214 putative DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D DGI_0203 putative DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DGI_3446 putative single-strand binding protein K03111 ssb; single-strand DNA-binding protein D DGI_2361 putative D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D DGI_0933 putative DNA G:T-mismatch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D DGI_2026 putative DNA mismatch endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D DGI_0476 putative DNA mismatch endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D DGI_2293 putative recombinase D K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D DGI_1993 putative recombinase A K03553 recA; recombination protein RecA D DGI_3449 ruvA; putative Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D DGI_3450 ruvB; putative Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D DGI_3448 putative crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D DGI_0295 putative primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D DGI_3466 radA; putative DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D DGI_1300 putative ATPase, AAA_4 family K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D DGI_1670 putative DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D DGI_0201 putative recombination protein RecR K06187 recR; recombination protein RecR D DGI_3494 recN; putative DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D DGI_3536 hypothetical protein K03554 rdgC; recombination associated protein RdgC D DGI_1866 cas1; putative CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D DGI_1135 putative DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D DGI_1137 putative DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D DGI_1131 putative DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D DGI_0924 putative histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D DGI_2514 hup-3; putative histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D DGI_2398 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D DGI_0638 hup-1; putative histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D DGI_2758 putative DNA-binding protein HU subunit beta K05788 ihfB; integration host factor subunit beta D DGI_1329 putative DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D DGI_0475 putative nucleotidyltransferase/DNA polymerase involved in DNA repair K03502 umuC; DNA polymerase V D DGI_0474 umuD; putative UmuD protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D DGI_2456 putative ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D DGI_0841 putative ribonucleotide-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DGI_1556 putative phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:dgg03029] D DGI_1559 putative translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D DGI_1359 putative translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D DGI_3413 tsf; putative Elongation factor Ts K02357 tsf; elongation factor Ts D DGI_1765 putative translation elongation factor Tu K02358 tuf; elongation factor Tu D DGI_1597 putative elongation factor G K02355 fusA; elongation factor G D DGI_2518 fusA-2; putative translation elongation factor G K02355 fusA; elongation factor G D DGI_2835 fusA; putative elongation factor G K02355 fusA; elongation factor G D DGI_0880 era; putative GTP-binding protein Era K03595 era; GTPase D DGI_2287 tyrS; putative tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DGI_1902 putative leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DGI_0849 aspS; putative aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D DGI_2317 putative arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D DGI_3211 gatA; putative aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D DGI_1747 putative Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D DGI_3210 gatC; putative aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D DGI_3446 putative single-strand binding protein K03111 ssb; single-strand DNA-binding protein D DGI_0433 putative outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family D DGI_3208 dnaK; putative molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D DGI_3206 putative GrpE protein HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE D DGI_3019 putative chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DGI_3023 putative 10 kDa chaperonin K04078 groES; chaperonin GroES D DGI_0267 putative chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D DGI_2347 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DGI_2531 putative Mrp protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D DGI_2987 putative YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:dgg02000] D DGI_1854 putative ABC transporter, transmembrane region:ABC transporter related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D DGI_2270 putative tat (twin-arginine translocation) pathway signal sequence domain protein K02020 modA; molybdate transport system substrate-binding protein D DGI_3199 putative molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D DGI_3200 putative molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein D DGI_3198 putative molybdate ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D DGI_2933 putative ABC transporter K05776 modF; molybdate transport system ATP-binding protein D DGI_0899 putative ABC transporter substrate binding protein precursor K05772 tupA; tungstate transport system substrate-binding protein D DGI_3052 putative ABC transporter periplasmic substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D DGI_0757 putative binding-protein-dependent transport systems inner membrane component K05773 tupB; tungstate transport system permease protein D DGI_0758 putative ABC transporter-like protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D DGI_0768 putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D DGI_0771 putative 2-aminoethylphosphonate ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein D DGI_0770 putative ABC-type spermidine/putrescine transport system, ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D DGI_2481 putative protein ynjB K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D DGI_2483 putative ABC-type transporter, integral membrane subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D DGI_2482 putative binding-protein-dependent transport system inner membrane protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D DGI_2479 putative Fe(3+)-transporting ATPase K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D DGI_1933 putative glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D DGI_1934 putative glycine/betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D DGI_1936 putative glycine/betaine/L-proline ABC transporter ATPase K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D DGI_2998 putative nitrate/sulfonate/bicarbonate ABC transporter periplasmic components-like protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D DGI_1263 putative ABC transporter-like protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D DGI_1264 putative ABC transporter related protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D DGI_1825 putative basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D DGI_2484 putative basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D DGI_1826 putative ABC transporter K23535 nupB; general nucleoside transport system permease protein D DGI_1827 putative ABC-type transporter, integral membrane subunit K23536 nupC; general nucleoside transport system permease protein D DGI_1829 putative ABC transporter family protein K23537 nupA; general nucleoside transport system ATP-binding protein D DGI_0856 putative mammalian cell entry domain-containing protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D DGI_2322 putative mammalian cell entry domain-containing protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D DGI_0734 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D DGI_0732 putative ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D DGI_0858 putative protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D DGI_2320 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D DGI_0733 putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D DGI_0857 putative sulfate-transporting ATPase K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D DGI_2321 putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D DGI_0855 putative protein of unknown function DUF330 K18480 linN; cholesterol transport system auxiliary component D DGI_1259 putative Tat pathway signal sequence domain protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D DGI_1392 putative extracellular solute-binding protein, family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D DGI_1260 putative ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein D DGI_1261 putative binding-protein-dependent transporter inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D DGI_3329 putative ABC transporter integral membrane protein K02057 ABC.SS.P; simple sugar transport system permease protein D DGI_3330 putative ABC transporter integral membrane protein K02057 ABC.SS.P; simple sugar transport system permease protein D DGI_3328 putative ABC transporter K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D DGI_1800 putative phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D DGI_1884 putative ABC-type phosphate transport system K02040 pstS; phosphate transport system substrate-binding protein D DGI_2900 putative phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D DGI_1798 putative pstC1 gene product K02037 pstC; phosphate transport system permease protein D DGI_1886 putative pstC1 gene product K02037 pstC; phosphate transport system permease protein D DGI_2901 putative phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D DGI_1799 putative phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D DGI_1885 putative phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D DGI_2902 putative phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D DGI_1802 putative phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D DGI_1881 putative phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D DGI_0290 putative phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D DGI_0066 putative Lysine-arginine-ornithine-binding periplasmic protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D DGI_2207 putative Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_2245 putative ABC transporter substrate binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_1031 putative Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_1095 putative Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_3134 putative ABC transporter substrate binding protein precursor K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_2648 putative Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_2654 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_1188 putative Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D DGI_2206 putative branched-chain amino acid ABC-type transport system, permease component K01997 livH; branched-chain amino acid transport system permease protein D DGI_2243 putative ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D DGI_1029 putative inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D DGI_1094 putative ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein D DGI_3136 putative inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D DGI_2647 putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein D DGI_2205 putative inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D DGI_2244 putative ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D DGI_1030 putative inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D DGI_1093 putative ABC-type branched-chain amino acid transport system, permease component K01998 livM; branched-chain amino acid transport system permease protein D DGI_2646 putative livM4 gene product K01998 livM; branched-chain amino acid transport system permease protein D DGI_3137 putative ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D DGI_2204 putative ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DGI_2241 putative ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DGI_1096 putative Phosphonate-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein D DGI_3138 putative ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D DGI_2645 putative ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D DGI_2203 putative ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DGI_2246 putative ABC transporter-like protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DGI_1092 putative ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D DGI_2644 putative ABC transporter K01996 livF; branched-chain amino acid transport system ATP-binding protein D DGI_3139 putative Fe(3+)-transporting ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein D DGI_3294 putative ABC transporter substrate binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D DGI_3292 putative ABC-type transporter, integral membrane subunit K05832 K05832; putative tryptophan/tyrosine transport system permease protein D DGI_3291 putative ABC transporter K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D DGI_2103 putative amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DGI_1061 putative ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DGI_1927 putative extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DGI_1966 putative amino acid ABC transporter periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DGI_0124 putative ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DGI_0534 putative family 3 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DGI_2683 putative family 3 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DGI_2543 putative family 3 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DGI_3228 putative family 3 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DGI_1603 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DGI_1716 putative ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DGI_2976 putative extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DGI_2105 putative polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D DGI_1928 putative polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D DGI_2541 putative His/Glu/Gln/Arg/opine ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D DGI_2104 putative polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D DGI_2101 putative amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D DGI_1459 putative peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DGI_1458 putative ABC transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein D DGI_1457 putative binding-protein-dependent transport system inner membrane protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D DGI_1456 putative oligopeptide/dipeptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D DGI_1455 putative oligopeptide/dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D DGI_2892 putative family 5 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D DGI_2891 putative binding-protein-dependent transport system inner membrane protein K13894 yejB; microcin C transport system permease protein D DGI_2890 putative ABC transporter permease K13895 yejE; microcin C transport system permease protein D DGI_2888 putative oligopeptide/dipeptide ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D DGI_0634 putative periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D DGI_0633 putative transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D DGI_0632 putative phosphonate-transporting ATPase K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D DGI_2352 putative periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein D DGI_2354 putative iron compound ABC transporter permease K25027 btuC; cobalamin transport system permease protein D DGI_2353 putative ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D DGI_2904 putative periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D DGI_2906 putative permease component of zinc ABC transporter K09816 znuB; zinc transport system permease protein D DGI_2905 putative ABC transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D DGI_1223 putative ABC-type Mn2+/Zn2+ transport system K09819 ABC.MN.P; manganese/iron transport system permease protein D DGI_1224 putative ATPase component of Mn/Zn ABC-type transporter K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein D DGI_3148 putative cobalt ABC transporter permease K02008 cbiQ; cobalt/nickel transport system permease protein D DGI_1318 putative cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein D DGI_3147 putative cobalt ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D DGI_0628 hypothetical protein K10094 cbiK; nickel transport protein D DGI_1316 putative Nickel uptake substrate-specific transmembrane region K10094 cbiK; nickel transport protein D DGI_1317 hypothetical protein K16915 cbiL; nickel transport protein D DGI_1445 putative BioY protein K03523 bioY; biotin transport system substrate-specific component D DGI_1486 putative ABC-type transporter, integral membrane subunit K16783 bioN; biotin transport system permease protein D DGI_0420 putative ABC transporter-like protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D DGI_0834 crtC; putative capsule polysaccharide export inner-membrane protein ctrC K09688 kpsM; capsular polysaccharide transport system permease protein D DGI_0833 putative lipopolysaccharide biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein D DGI_0835 putative cation effux pump BexA K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D DGI_4023 tagG; polysaccharide ABC transporter, permease K09690 wzm; homopolymeric O-antigen transport system permease protein D DGI_4022 tagH; polysaccharide ABC transporter, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D DGI_0263 putative ABC-type transport system involved in multi-copper enzyme maturation, permease component K25151 gldF; gliding motility-associated transport system permease protein D DGI_0262 hypothetical protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D DGI_0264 putative ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein K25153 gldG; gliding motility-associatede transport system auxiliary component D DGI_0431 putative lipoprotein releasing system transmembrane protein LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D DGI_0432 putative Phosphonate-transporting ATPase K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D DGI_2210 ccmC; putative cytochrome C assembly protein K02195 ccmC; heme exporter protein C D DGI_2211 ccmB; putative heme exporter protein B K02194 ccmB; heme exporter protein B D DGI_2212 ccmA; putative heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D DGI_0843 hypothetical protein K09811 ftsX; cell division transport system permease protein D DGI_0842 putative cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D DGI_2689 putative antibiotic transport system permease K01992 ABC-2.P; ABC-2 type transport system permease protein D DGI_2690 putative ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D DGI_3050 putative ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D DGI_0540 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D DGI_3131 putative protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D DGI_2674 putative protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D DGI_2945 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D DGI_3427 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D DGI_2227 putative protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D DGI_2944 putative ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D DGI_2226 putative ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D DGI_0539 putative ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D DGI_3130 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D DGI_2946 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D DGI_3428 putative Phosphonate-transporting ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D DGI_3530 putative ABC transporter related protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D DGI_3085 putative multidrug efflux transporter K26939 norM; MATE family, multidrug efflux pump D DGI_3095 putative MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D DGI_2882 putative MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D DGI_0840 putative major facilitator superfamily protein K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein D DGI_0988 putative major facilitator superfamily protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D DGI_2475 putative major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family D DGI_3112 ptsA; putative phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D DGI_3113 putative phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D DGI_2713 putative EAL domain protein K02761 celB; cellobiose PTS system EIIC component D DGI_2414 putative PTS system transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D DGI_3114 putative PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component D DGI_2416 ptsN; putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D DGI_2791 putative TrkA-N domain protein K10716 kch; voltage-gated potassium channel D DGI_0590 putative ammonium transporter K03320 amt; ammonium transporter, Amt family D DGI_2554 amt; putative ammonium transporter K03320 amt; ammonium transporter, Amt family D DGI_0557 putative von Willebrand factor A K07114 yfbK; Ca-activated chloride channel homolog D DGI_3174 putative von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog D DGI_1009 putative MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel D DGI_2251 putative magnesium transporter K06213 mgtE; magnesium transporter D DGI_0883 putative MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D DGI_0106 putative MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D DGI_3439 motA-2; putative MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D DGI_0884 putative OmpA/MotB domain-containing protein K02557 motB; chemotaxis protein MotB D DGI_0885 putative OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D DGI_0107 putative OmpA/MotB domain-containing protein K02557 motB; chemotaxis protein MotB D DGI_2609 putative OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D DGI_3440 putative OmpA/MotB domain-containing protein K02557 motB; chemotaxis protein MotB D DGI_1005 putative protein TolQ K03562 tolQ; biopolymer transport protein TolQ D DGI_3176 tolQ2; putative protein TolQ K03562 tolQ; biopolymer transport protein TolQ D DGI_3177 putative protein TolR K03560 tolR; biopolymer transport protein TolR D DGI_0032 hypothetical protein K03284 corA; magnesium transporter D DGI_3472 putative CrcB-like protein K06199 crcB; fluoride exporter D DGI_2217 putative protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D DGI_2121 putative OmpA domain-containing protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D DGI_1193 putative major outer membrane protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D DGI_1686 putative outer membrane protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D DGI_0832 putative outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D DGI_0182 putative outer membrane efflux protein K12340 tolC; outer membrane protein D DGI_1960 putative polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D DGI_4054 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D DGI_2951 putative polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D DGI_0433 putative outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family D DGI_2520 putative lipoprotein K05807 bamD; outer membrane protein assembly factor BamD D DGI_1267 hypothetical protein K07278 tamA; translocation and assembly module TamA D DGI_1268 putative protein of unknown function DUF490 K09800 tamB; translocation and assembly module TamB D DGI_2753 hypothetical protein K06189 corC; hemolysin (HlyC) family protein D DGI_0830 putative acriflavin resistance protein K07787 cusA; copper/silver efflux system protein D DGI_0468 putative acrB RND-type permease K18138 acrB; multidrug efflux pump D DGI_2490 putative acriflavin resistance protein K18989 vexF; multidrug efflux pump D DGI_2656 putative molecular chaperone, SugES-like protein K11741 sugE; quaternary ammonium compound-resistance protein SugE D DGI_0125 hypothetical protein K15268 eamA; O-acetylserine/cysteine efflux transporter D DGI_1192 putative protein of unknown function DUF6 transmembrane K03298 TC.DME; drug/metabolite transporter, DME family D DGI_1423 putative L-lactate transport K03303 lutP; lactate permease D DGI_1254 Ca2+/Na+ antiporter K07301 yrbG; cation:H+ antiporter D DGI_2303 putative sodium/hydrogen exchanger K26735 KEA4_5_6; K+:H+ antiporter D DGI_2145 putative H(+)-transporting two-sector ATPase K03498 trkH; trk/ktr system potassium uptake protein D DGI_2568 putative TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D DGI_2147 putative TrkA-N domain-containing protein K03499 trkA; trk/ktr system potassium uptake protein D DGI_2569 trkA; putative potassium transporter peripheral membrane protein K03499 trkA; trk/ktr system potassium uptake protein D DGI_2699 putative uracil-xanthine permease K02824 uraA; uracil permease D DGI_0998 putative anion transporter K11106 ttdT; L-tartrate/succinate antiporter D DGI_1025 putative Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family D DGI_0373 sulP; putative sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D DGI_2982 putative arsenical-resistance protein K03325 ACR3; arsenite transporter D DGI_2631 putative Bile acid:sodium symporter K03325 ACR3; arsenite transporter D DGI_2847 mnhB; putative monovalent cation/H+ antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D DGI_2848 mnhC; putative NADH-ubiquinone oxidoreductase chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D DGI_0249 nuoL; putative NADH-Ubiquinone/plastoquinone K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D DGI_0251 nuoN; putative monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D DGI_2849 putative NADH/ubiquinone/plastoquinone K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D DGI_2850 mnhA; putative NADH-ubiquinone/plastoquinone (complex I), subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D DGI_2852 mnhD; putative monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D DGI_2843 mnhE; putative mnhE gene product K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D DGI_2844 mnhF; putative multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D DGI_2845 mnhG; putative Na+/H+ antiporter subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D DGI_1338 putative uncharacterized membrane protein, putative virulence factor K03980 murJ; putative peptidoglycan lipid II flippase D DGI_0450 putative integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D DGI_2884 putative virulence factor MVIN family protein K03980 murJ; putative peptidoglycan lipid II flippase D DGI_0129 putative auxin efflux carrier protein K13936 mdcF; malonate transporter and related proteins D DGI_0736 putative lysine exporter protein LysE/YggA K05834 rhtB; homoserine/homoserine lactone efflux protein D DGI_0979 putative AzlC family protein K26605 azlC; branched chain amino acid efflux pump D DGI_1625 putative branched-chain amino acid transport protein AzlC K26605 azlC; branched chain amino acid efflux pump D DGI_0978 putative branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump D DGI_1626 putative branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump D DGI_0796 putative membrane protein K09125 yhhQ; queuosine precursor transporter D DGI_2219 putative multiple antibiotic resistance (MarC)-like protein K05595 marC; multiple antibiotic resistance protein D DGI_0346 putative cell division protein FtsW K03588 ftsW; cell division protein FtsW D DGI_1141 putative membrane hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein D DGI_3181 putative peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D DGI_3178 putative tonB protein K03646 tolA; colicin import membrane protein D DGI_2637 putative WD40-like Beta Propeller K03641 tolB; TolB protein D DGI_3180 putative Tol-Pal system beta propeller repeat-containing protein TolB K03641 tolB; TolB protein D DGI_0241 putative Nitrate reductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D DGI_0131 qrcC; putative molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit K23301 qrcC; menaquinone reductase, iron-sulfur cluster-binding subunit [EC:1.97.-.-] D DGI_0132 qrcB; putative molybdopterin oxidoreductase K23302 qrcB; menaquinone reductase, molybdopterin-binding-like subunit D DGI_0130 qrcD; putative polysulfide reductase NrfD K23303 qrcD; menaquinone reductase, integral membrane subunit D DGI_0831 putative RND family efflux transporter MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D DGI_0551 putative efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D DGI_0467 putative acrA Membrane Fusion Protein K03585 acrA; membrane fusion protein, multidrug efflux system D DGI_2491 putative RND family efflux transporter MFP subunit K18990 vexE; membrane fusion protein, multidrug efflux system D DGI_0387 putative efflux transporter protein K07799 mdtA; membrane fusion protein, multidrug efflux system D DGI_2952 putative polysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D DGI_0630 putative FeoA family protein K04758 feoA; ferrous iron transport protein A D DGI_1319 putative FeoA family protein K04758 feoA; ferrous iron transport protein A D DGI_1320 putative Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A D DGI_0619 putative small GTP-binding protein K04759 feoB; ferrous iron transport protein B D DGI_1321 putative ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D DGI_2213 ccmF; putative cytochrome C assembly protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF D DGI_2308 putative MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:dgg02044] D DGI_0182 putative outer membrane efflux protein K12340 tolC; outer membrane protein D DGI_1956 putative type II secretion system protein E K02450 gspA; general secretion pathway protein A D DGI_0073 putative conseved hypothetical protein K02450 gspA; general secretion pathway protein A D DGI_4003 gspD; general secretion pathway protein D K02453 gspD; general secretion pathway protein D D DGI_4004 gspE; type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D DGI_4005 gspF; type II secretion system protein K02455 gspF; general secretion pathway protein F D DGI_4073 gspG; general secretion pathway protein G K02456 gspG; general secretion pathway protein G D DGI_4002 hypothetical protein K02460 gspK; general secretion pathway protein K D DGI_0188 putative peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D DGI_2167 putative general secretion pathway protein E K02652 pilB; type IV pilus assembly protein PilB D DGI_0992 putative type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D DGI_0439 putative type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D DGI_0030 putative type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D DGI_0127 putative type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D DGI_0608 putative type II/IV secretion system family protein K02652 pilB; type IV pilus assembly protein PilB D DGI_3000 putative type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D DGI_0072 putative type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D DGI_0074 putative bacterial type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ D DGI_2579 putative twitching motility protein K02669 pilT; twitching motility protein PilT D DGI_2580 putative twitching motility protein K02669 pilT; twitching motility protein PilT D DGI_1325 putative prepilin-type N-terminal cleavage/methylation domain-containing protein K10924 mshA; MSHA pilin protein MshA D DGI_3504 hypothetical protein K02221 yggT; YggT family protein D DGI_1910 putative CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D DGI_0447 putative DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D DGI_1083 putative flagellar biosynthesis protein K02400 flhA; flagellar biosynthesis protein FlhA D DGI_1084 putative flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D DGI_0505 fliF; putative flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D DGI_0503 hypothetical protein K02411 fliH; flagellar assembly protein FliH D DGI_0502 putative flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D DGI_0887 fliN; putative flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D DGI_0888 putative flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D DGI_0889 fliP; putative flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP D DGI_0890 fliQ; putative flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D DGI_1085 putative flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D DGI_0489 putative TRAG family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D DGI_2573 clpA; putative type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG D DGI_0546 putative sigma54 specific transcriptional regulator K11914 sfa2; sigma-54 dependent transcriptional regulator D DGI_3107 putative preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DGI_2737 putative preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D DGI_1768 putative preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D DGI_2736 putative protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D DGI_0331 putative preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D DGI_2813 putative preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D DGI_3124 putative signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D DGI_0197 putative signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D DGI_2738 putative preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D DGI_2987 putative YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D DGI_3500 putative twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D DGI_2197 tatB; putative twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB D DGI_2196 tatC; putative Sec-independent protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:dgg02042] D DGI_2217 putative protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:dgg02022] D DGI_2141 putative multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D DGI_0291 putative two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D DGI_0292 putative two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D DGI_2166 putative response regulator receiver protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D DGI_1620 phoP; putative PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D DGI_3253 putative Response regulator receiver domain protein K18987 irr; two-component system, OmpR family, response regulator Irr D DGI_0578 putative two component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D DGI_0579 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator D DGI_3041 putative response regulator receiver protein K02483 K02483; two-component system, OmpR family, response regulator D DGI_2301 putative two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D DGI_1071 putative PAS domain S-box K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D DGI_1145 putative regulatory protein LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D DGI_1144 putative two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator D DGI_1063 putative signal transduction histidine kinase, nitrogen specific K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D DGI_1064 putative transcriptional regulatory protein ZraR K07713 zraR; two-component system, NtrC family, response regulator HydG D DGI_1941 putative Fis family two component sigma-54 specific transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D DGI_0379 putative sensory box protein K07713 zraR; two-component system, NtrC family, response regulator HydG D DGI_1069 putative two component, sigma54 specific, Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D DGI_2936 putative PAS modulated sigma54 specific transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC D DGI_0544 putative histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DGI_3043 putative integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DGI_0143 putative PAS/PAC sensor signal transduction histine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DGI_1405 putative PAS/PAC sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DGI_2940 putative multi-sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DGI_3045 putative integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D DGI_1580 putative two component sigma-54 specific transcriptional regulator K02481 flgR; two-component system, NtrC family, response regulator D DGI_1424 putative two component, sigma54 specific, transcriptional regulator K02481 flgR; two-component system, NtrC family, response regulator D DGI_1946 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_0018 cheA; CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_0401 putative chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_2994 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_2995 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_3469 cheA; putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_3078 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_3241 cheA; putative chemotaxis protein histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_3245 putative chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_1535 putative response regulator receiver protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_1233 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_1979 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_0573 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_0019 cheY; CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_0407 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_2598 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_3468 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_3057 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_3242 putative alkaline phosphatase synthesis transcriptional regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_3246 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_1947 putative response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DGI_0024 cheB; CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DGI_3471 cheB; putative response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DGI_3249 putative chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DGI_1244 putative MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DGI_2438 putative MCP methyltransferase/methylesterase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DGI_3352 putative PAS:CheB methylesterase:MCP methyltransferase, CheR-type K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DGI_2712 putative MCP methyltransferase/methylesterase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DGI_1073 putative response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D DGI_1606 putative response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D DGI_2595 putative phytochrome-like protein Cph1 family protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D DGI_0552 putative PAS/PAC sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D DGI_1256 putative response regulator receiver K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D DGI_1653 putative Fis family two component sigma-54 specific transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D DGI_0541 putative response regulator K15012 regA; two-component system, response regulator RegA D DGI_1441 putative PAS sensor protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D DGI_2292 putative two-component hybrid sensor and regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D DGI_0984 putative multi-sensor hybrid histidine kinase K20972 retS; two-component system, sensor histidine kinase RetS D DGI_0815 putative two-component hybrid sensor and regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D DGI_0817 putative two-component hybrid sensor and regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D DGI_1313 putative Hpt sensor hybrid histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D DGI_2965 putative PAS sensor protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:dgg02035] D DGI_1946 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_0018 cheA; CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_0401 putative chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_2994 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_2995 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_3469 cheA; putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_3078 putative CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_3241 cheA; putative chemotaxis protein histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_3245 putative chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D DGI_1665 putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D DGI_1942 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DGI_0020 cheW; CheW K03408 cheW; purine-binding chemotaxis protein CheW D DGI_0399 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DGI_0423 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DGI_2604 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DGI_3080 cheW; putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D DGI_3083 cheW; putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D DGI_3244 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW D DGI_3251 putative CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D DGI_1143 putative chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW D DGI_1231 putative CheC domain protein K03409 cheX; chemotaxis protein CheX D DGI_2979 putative CheC domain protein K03409 cheX; chemotaxis protein CheX D DGI_0821 cheC; putative CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D DGI_1950 putative CheD family protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D DGI_2597 putative CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D DGI_2639 putative CheD-like chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D DGI_3271 putative MCP proteins methylation stimulator CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D DGI_3056 putative chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D DGI_3250 putative chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D DGI_1943 putative CheR-type MCP methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DGI_0022 cheR; CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DGI_3470 cheR-1; putative chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DGI_3247 putative chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D DGI_1947 putative response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DGI_0024 cheB; CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DGI_3471 cheB; putative response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DGI_3249 putative chemotaxis-specific methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D DGI_1244 putative MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DGI_2438 putative MCP methyltransferase/methylesterase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DGI_3352 putative PAS:CheB methylesterase:MCP methyltransferase, CheR-type K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DGI_2712 putative MCP methyltransferase/methylesterase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D DGI_1535 putative response regulator receiver protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_1233 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_1979 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_0573 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_0019 cheY; CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_0407 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_2598 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_3468 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_3057 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_3242 putative alkaline phosphatase synthesis transcriptional regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_3246 putative response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D DGI_2780 putative chemotaxis protein K03414 cheZ; chemotaxis protein CheZ D DGI_1073 putative response regulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D DGI_1606 putative response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D DGI_2263 putative methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D DGI_0986 putative chemotaxis sensory transducer protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_1240 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_1382 putative chemotaxis sensory transducer protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_1490 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_1602 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_1693 putative methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D DGI_0276 putative HAMP domain protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_0381 putative methyl-accepting chemotaxis sensory transducer protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_0398 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_0422 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_0498 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_0582 putative HAMP domain protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_0662 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_2675 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_2707 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_2714 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_2743 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_3081 mcp; putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_3084 mcp; putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_3240 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_3252 putative Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_3422 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D DGI_2605 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D DGI_0503 hypothetical protein K02411 fliH; flagellar assembly protein FliH D DGI_0502 putative flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D DGI_1177 putative flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D DGI_0888 putative flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D DGI_0889 fliP; putative flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP D DGI_0890 fliQ; putative flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D DGI_1085 putative flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D DGI_1083 putative flagellar biosynthesis protein K02400 flhA; flagellar biosynthesis protein FlhA D DGI_1084 putative flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D DGI_0504 putative flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D DGI_1925 putative flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D DGI_0887 fliN; putative flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D DGI_0505 fliF; putative flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D DGI_0519 putative flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI D DGI_0521 putative FlgA family protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D DGI_0520 putative flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D DGI_0886 putative flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D DGI_1079 putative flagellar basal body protein K02415 fliL; flagellar protein FliL D DGI_0506 fliE; putative flagellar basal body component FliE K02408 fliE; flagellar hook-basal body complex protein FliE D DGI_0110 putative Flagellar hook-length control protein-like protein K02414 fliK; flagellar hook-length control protein FliK D DGI_0508 flgB; putative flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D DGI_0507 flgC; putative flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D DGI_0111 putative basal-body rod modification protein FlgD, flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D DGI_0523 putative flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF D DGI_0522 putative flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D DGI_0518 putative peptidase M23 K02395 flgJ; peptidoglycan hydrolase FlgJ D DGI_1629 putative flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D DGI_0112 putative flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D DGI_0516 putative flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D DGI_0515 putative flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D DGI_2078 putative flagellin domain-containing protein K02406 fliC; flagellin D DGI_1174 hypothetical protein K02406 fliC; flagellin D DGI_0113 putative bacterial flagellin family protein K02406 fliC; flagellin D DGI_3403 putative flagellin domain-containing protein K02406 fliC; flagellin D DGI_3534 putative flagellin K02406 fliC; flagellin D DGI_3404 putative flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2 D DGI_3405 putative flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D DGI_1080 putative RNA polymerase sigma 28 subunit K02405 fliA; RNA polymerase sigma factor FliA D DGI_0883 putative MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D DGI_0106 putative MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D DGI_3439 motA-2; putative MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D DGI_0884 putative OmpA/MotB domain-containing protein K02557 motB; chemotaxis protein MotB D DGI_0885 putative OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D DGI_0107 putative OmpA/MotB domain-containing protein K02557 motB; chemotaxis protein MotB D DGI_2609 putative OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D DGI_3440 putative OmpA/MotB domain-containing protein K02557 motB; chemotaxis protein MotB D DGI_0391 putative Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D DGI_1653 putative Fis family two component sigma-54 specific transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D DGI_0513 putative fliW family protein K13626 fliW; flagellar assembly factor FliW D DGI_1489 putative anti-sigma-28 factor, FlgM family protein K02398 flgM; negative regulator of flagellin synthesis FlgM D DGI_1082 putative GTP-binding signal recognition particle SRP54 G-domain-containing protein K02404 flhF; flagellar biosynthesis protein FlhF D DGI_1081 putative flagellar synthesis regulator K04562 flhG; flagellar biosynthesis protein FlhG D DGI_2757 putative flagellar synthesis regulator FleN K04562 flhG; flagellar biosynthesis protein FlhG D DGI_2579 putative twitching motility protein K02669 pilT; twitching motility protein PilT D DGI_2580 putative twitching motility protein K02669 pilT; twitching motility protein PilT D DGI_2167 putative general secretion pathway protein E K02652 pilB; type IV pilus assembly protein PilB D DGI_0992 putative type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D DGI_0439 putative type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D DGI_0030 putative type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D DGI_0127 putative type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D DGI_0608 putative type II/IV secretion system family protein K02652 pilB; type IV pilus assembly protein PilB D DGI_3000 putative type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D DGI_0072 putative type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D DGI_0188 putative peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D DGI_0074 putative bacterial type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:dgg04812] D DGI_0393 hypothetical protein K06990 MEMO1; MEMO1 family protein D DGI_2254 putative rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D DGI_0660 putative rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D DGI_0336 putative rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D DGI_0339 putative cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D DGI_0341 putative cell division protein FtsA K03590 ftsA; cell division protein FtsA D DGI_3156 minC; putative septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D DGI_3157 minD; putative septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D DGI_3158 minE; putative cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D DGI_1617 soj; putative Soj K03496 parA; chromosome partitioning protein D DGI_0021 parA; ParA family protein K03496 parA; chromosome partitioning protein D DGI_0862 putative cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D DGI_3097 putative Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D DGI_3099 putative chromosomal partitioning ATPase ParA K03496 parA; chromosome partitioning protein D DGI_4025 soj; Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D DGI_3343 hypothetical protein K03496 parA; chromosome partitioning protein D DGI_2075 putative ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DGI_0860 putative parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:dgg04147] D DGI_0704 eno; putative phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DGI_2188 gap; putative type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DGI_2546 gap1; putative glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DGI_1347 pgk; putative phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D DGI_0179 pyk; putative pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D DGI_3518 prxU; putative peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D DGI_3019 putative chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DGI_3208 dnaK; putative molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D DGI_2341 gpi; putative glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D DGI_2200 quaB; putative inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D DGI_1765 putative translation elongation factor Tu K02358 tuf; elongation factor Tu D DGI_0637 putative histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D DGI_2242 putative fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DGI_3014 putative acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DGI_2476 putative Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D DGI_1104 putative S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D DGI_2567 ak; putative Adenylate Kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D DGI_2746 putative adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D DGI_2160 putative argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D DGI_2161 argG; putative Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D DGI_2524 fbp; putative fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D DGI_2304 putative glycogen branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D DGI_1150 putative glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DGI_1257 putative Glutamate--putrescine ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DGI_0792 glnN; putative glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2] D DGI_2629 putative Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D DGI_2137 putative alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D DGI_1217 putative phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D DGI_1688 putative FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DGI_1481 etfA; putative Electron transfer flavoprotein alpha/beta-subunit K03522 fixB; electron transfer flavoprotein alpha subunit D DGI_1385 zwf; putative glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D DGI_0332 tpi; putative triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D DGI_1753 gpmA; putative phosphoglycerate mutase 1 family K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:dgg02048] D DGI_1866 cas1; putative CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D DGI_2448 cas3; putative CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D DGI_1867 cas3; putative CRISPR-associated helicase Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D DGI_1868 csy1; putative CRISPR-associated protein, Csy1 family K19127 csy1; CRISPR-associated protein Csy1 D DGI_1869 csy2; putative CRISPR-associated protein Csy2 family K19128 csy2; CRISPR-associated protein Csy2 D DGI_1870 csy3; putative CRISPR-associated Csy3 family protein K19129 csy3; CRISPR-associated protein Csy3 D DGI_1871 csy4; putative CRISPR-associated protein, Csy4 family K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-] D DGI_2450 csb1; putative CRISPR-associated protein K19131 csb1; CRISPR-associated protein Csb1 D DGI_2449 csb2; putative CRISPR-associated protein K19132 csb2; CRISPR-associated protein Csb2 D DGI_1301 hypothetical protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D DGI_1299 putative restriction modification system DNA specificity subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D DGI_1296 putative N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D DGI_2361 putative D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D DGI_0969 putative DNA methylase N-4/N-6 domain-containing protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D DGI_0935 putative cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DGI_2020 putative DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DGI_2028 putative DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DGI_0478 putative DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DGI_2058 putative HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D DGI_2187 putative restriction endonuclease K07448 mrr; restriction system protein D DGI_2019 hypothetical protein K19155 yhaV; toxin YhaV [EC:3.1.-.-] D DGI_2018 putative AbrB family transcriptional regulator K19156 prlF; antitoxin PrlF D DGI_3166 hypothetical protein K06218 relE; mRNA interferase RelE/StbE D DGI_3338 putative HipA N-terminal domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D DGI_3339 putative helix-hairpin-helix DNA-binding motif-containing protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D DGI_1485 putative phage shock protein K03973 pspC; phage shock protein C D DGI_1298 putative death-on-curing family protein K07341 doc; death on curing protein D DGI_3232 putative plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1 D DGI_0005 putative plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1 D DGI_0004 putative XRE family transcriptional regulator K21498 higA-1; antitoxin HigA-1 D DGI_3233 putative DNA-binding protein K21498 higA-1; antitoxin HigA-1 D DGI_0339 putative cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D DGI_2254 putative rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D DGI_0660 putative rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D DGI_0336 putative rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D DGI_1837 putative glutamyl/glutaminyl-tRNA synthetase catalytic domain-containing protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DGI_3520 gltX; putative glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DGI_2347 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:dgg01504] D DGI_4034 chloramphenicol acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-] D DGI_2235 putative chloramphenicol acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28] D DGI_3051 putative D-Ala-D-Ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D DGI_0551 putative efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D DGI_0467 putative acrA Membrane Fusion Protein K03585 acrA; membrane fusion protein, multidrug efflux system D DGI_0468 putative acrB RND-type permease K18138 acrB; multidrug efflux pump D DGI_0182 putative outer membrane efflux protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:dgg00537] D DGI_2137 putative alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins [BR:dgg03200] C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:dgg03100] D DGI_2359 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DGI_3256 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DGI_3162 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DGI_1185 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DGI_0469 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DGI_1239 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DGI_1863 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DGI_3421 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DGI_3231 trnN; tRNA-Asn K14220 tRNA-Asn; tRNA Asn D DGI_0361 trnD; tRNA-Asp K14221 tRNA-Asp; tRNA Asp D DGI_1677 trnC; tRNA-Cys K14222 tRNA-Cys; tRNA Cys D DGI_1109 trnQ; tRNA-Gln K14223 tRNA-Gln; tRNA Gln D DGI_3391 trnQ; tRNA-Gln K14223 tRNA-Gln; tRNA Gln D DGI_1110 trnE; tRNA-Glu K14224 tRNA-Glu; tRNA Glu D DGI_1762 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DGI_1678 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DGI_1565 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DGI_1676 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DGI_0449 trnH; tRNA-His K14226 tRNA-His; tRNA His D DGI_1184 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile D DGI_0330 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DGI_0530 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DGI_2125 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DGI_1022 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DGI_2173 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DGI_2266 trnK; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D DGI_3170 trnK; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D DGI_0056 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met D DGI_1735 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met D DGI_2782 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met D DGI_0972 trnF; tRNA-Phe K14231 tRNA-Phe; tRNA Phe D DGI_0025 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DGI_2095 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DGI_3369 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DGI_3105 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DGI_2424 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DGI_3278 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DGI_0406 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DGI_3298 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DGI_1760 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DGI_1763 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DGI_3382 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DGI_1767 trnW; tRNA-Trp K14235 tRNA-Trp; tRNA Trp D DGI_1761 trnY; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D DGI_0068 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val D DGI_0360 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val D DGI_1361 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val D DGI_0303 trnU; tRNA-Sec K14238 tRNA-Sec; tRNA Sec D DGI_1183 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DGI_1186 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DGI_1187 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D DGI_2469 putative Carbon-monoxide dehydrogenase (acceptor) K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D DGI_0082 iorA; putative indolepyruvate ferredoxin oxidoreductase subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D DGI_0081 putative Indolepyruvate ferredoxin oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D DGI_0902 mop; Aldehyde oxidoreductase K07469 mop; aldehyde oxidoreductase [EC:1.2.99.7] D DGI_1479 putative electron-transferring-flavoprotein dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D DGI_1951 putative ACP phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D DGI_0308 putative methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D DGI_1930 hypothetical protein K17892 FTRC; ferredoxin-thioredoxin reductase catalytic chain [EC:1.8.7.2] D DGI_0328 putative redoxin domain-containing protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D DGI_1684 putative alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D DGI_2261 hydB; NiFe hydrogenase large subunit K00437 hydB; [NiFe] hydrogenase large subunit [EC:1.12.2.1] D DGI_2262 hydA; NiFe hydrogenase small subunit K18008 hydA; [NiFe] hydrogenase small subunit [EC:1.12.2.1] D DGI_3082 nlr; putative Superoxide dismutase K05919 dfx; superoxide reductase [EC:1.15.1.2] D DGI_1715 putative ferroxidase K02217 ftnA; ferritin [EC:1.16.3.2] D DGI_1690 nfnA; putative ferredoxin-NADP(+) reductase subunit alpha K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D DGI_1309 putative protein-tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D DGI_2981 putative protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D DGI_0909 putative Radical SAM domain protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5] D DGI_1235 putative Anaerobic ribonucleoside-triphosphate reductase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D DGI_3195 putative Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D DGI_0133 qrcA; putative cytochrome C K23300 qrcA; menaquinone reductase, multiheme cytochrome c subunit [EC:1.97.-.-] D DGI_2533 pcm; putative protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D DGI_1744 putative Carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D DGI_2754 putative apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D DGI_1995 putative acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D DGI_1534 putative glutamine cyclotransferase superfamily K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D DGI_3477 aat; putative Leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D DGI_0729 hypothetical protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D DGI_1717 putative deoxyhypusine synthase-like protein K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D DGI_1651 putative 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143] D DGI_1221 putative prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D DGI_1425 rnfF; putative ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D DGI_3394 putative Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D DGI_2698 putative thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D DGI_2635 putative PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D DGI_2720 putative metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D DGI_0816 putative response regulator receiver protein K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D DGI_1312 putative response regulator receiver modulated metal dependent phosphohydrolase K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D DGI_2966 putative response regulator/phosphatase K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D DGI_1066 hypothetical protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D DGI_0199 putative TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D DGI_2339 putative D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D DGI_0850 putative peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D DGI_2588 putative polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D DGI_0976 putative endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D DGI_0727 putative ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D DGI_1504 putative protein of unknown function K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D DGI_2498 putative carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D DGI_2110 putative polysaccharide lyase family 8 K19049 cslA; chondroitin AC lyase [EC:4.2.2.5] D DGI_0773 putative 4-aminobutyrate aminotransferase family protein K26913 pbfA; (R)-1-hydroxy-2-aminoethylphosphonate ammonia-lyase [EC:4.3.1.33] D DGI_1164 hypothetical protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D DGI_2650 hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D DGI_1311 putative coA-substrate-specific enzyme activase, putative domain protein K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9] D DGI_1430 rnfD; putative RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D DGI_1431 rnfC; putative 4Fe-4S ferredoxin K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D DGI_1426 rnfB; putative 4Fe-4S ferredoxin K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D DGI_0208 putative ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] C 99981 Carbohydrate metabolism D DGI_0879 putative sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A D DGI_2240 putative CBS domain containing membrane protein K04767 acuB; acetoin utilization protein AcuB D DGI_2607 hypothetical protein K04767 acuB; acetoin utilization protein AcuB D DGI_1417 putative Lactate utilization protein B/C K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D DGI_0760 fdhD; putative formate dehydrogenase subunit FdhD K02379 fdhD; FdhD protein D DGI_0418 putative Ferredoxin II K05337 fer; ferredoxin D DGI_1429 rnfG; putative RnfABCDGE type electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D DGI_1428 rnfE; putative RnfABCDGE type electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D DGI_1427 rnfA; putative RnfABCDGE type electron transport complex subunit A K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D DGI_1271 putative nitrogenase cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB D DGI_1275 putative nitrogenase cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB D DGI_1272 putative Nitrogenase K02592 nifN; nitrogenase molybdenum-iron protein NifN D DGI_1273 putative nitrogenase MoFe cofactor biosynthesis protein K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE D DGI_0456 qmoA; putative adenylylsulfate reductase-associated electron transfer protein QmoA K16885 qmoA; quinone-modifying oxidoreductase, subunit QmoA D DGI_0455 qmoB; putative methyl-viologen-reducing hydrogenase subunit delta K16886 qmoB; quinone-modifying oxidoreductase, subunit QmoB D DGI_0454 qmoC; putative quinone-interacting membrane-bound oxidoreductase complex subunit C K16887 qmoC; quinone-modifying oxidoreductase, subunit QmoC D DGI_2765 putative quinone-interacting membrane-bound oxidoreductase complex subunit C K16887 qmoC; quinone-modifying oxidoreductase, subunit QmoC D DGI_1615 fld; putative Flavodoxin K03839 fldA; flavodoxin I D DGI_0034 echA; EchA K14086 echA; ech hydrogenase subunit A D DGI_0035 echB; EchB K14087 echB; ech hydrogenase subunit B D DGI_0036 echC; EchC K14088 echC; ech hydrogenase subunit C D DGI_0037 echD; EchD K14089 echD; ech hydrogenase subunit D D DGI_0038 echE; EchE K14090 echE; ech hydrogenase subunit E D DGI_0039 echF; EchF K14091 echF; ech hydrogenase subunit F D DGI_2846 hypothetical protein K14113 ehbD; energy-converting hydrogenase B subunit D D DGI_2269 putative 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K02574 napH; ferredoxin-type protein NapH D DGI_1480 etfB; putative Electron transfer flavoprotein beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit D DGI_1681 dsrC; putative dissimilatory sulfite reductase, gamma subunit K23077 dsrC; dissimilatory sulfite reductase related protein C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D DGI_0881 hypothetical protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D DGI_0364 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D DGI_1543 putative ABC-1 domain-containing protein K03688 ubiB; ubiquinone biosynthesis protein D DGI_2290 putative molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism D DGI_0369 putative poly (3-hydroxybutyrate) depolymerase protein K03932 lpqC; polyhydroxybutyrate depolymerase C 99999 Others D DGI_0571 acsA; putative acetyltransferase family protein K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D DGI_2967 hypothetical protein K03704 cspA; cold shock protein D DGI_1279 putative nitrogen regulatory protein P-II K02589 nifHD1; nitrogen regulatory protein PII 1 D DGI_1278 putative nitrogen regulatory protein P-II K02590 nifHD2; nitrogen regulatory protein PII 2 D DGI_0589 putative nitrogen regulatory P-II family protein K04752 glnK; nitrogen regulatory protein P-II 2 D DGI_3216 hypothetical protein K09777 remA; extracellular matrix regulatory protein A C 99974 Translation D DGI_0043 ysh1; putative beta-lactamase fold exonuclease K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D DGI_3474 putative ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D DGI_2126 tig; putative trigger factor K03545 tig; trigger factor D DGI_0759 fdhE; putative formate dehydrogenase accessory protein K02380 fdhE; FdhE protein D DGI_3336 fdhE1; putative formate dehydrogenase, formation protein FdhE1 K02380 fdhE; FdhE protein D DGI_3111 ptsH; putative SsrA-binding protein K03664 smpB; SsrA-binding protein D DGI_2259 hynD; hynD K04653 hypC; hydrogenase expression/formation protein HypC D DGI_1098 hypD; putative hydrogenase expression/formation protein K04654 hypD; hydrogenase expression/formation protein HypD D DGI_1099 hypE; putative hydrogenase expression/formation protein K04655 hypE; hydrogenase expression/formation protein HypE D DGI_0896 hypF; putative (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D DGI_1929 putative glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH D DGI_1060 putative glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH D DGI_1783 putative Mg chelatase subunit ChlI K07391 comM; magnesium chelatase family protein D DGI_0911 putative XshC-Cox1-family protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D DGI_1899 putative DNA repair protein RadC K03630 radC; DNA repair protein RadC D DGI_2728 putative HhH-GPD family protein K07457 K07457; endonuclease III related protein D DGI_0483 putative exonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D DGI_3116 hypothetical protein K07460 yraN; putative endonuclease D DGI_0014 putative DNA protecting protein DprA K04096 smf; DNA processing protein D DGI_2298 hypothetical protein K07478 ycaJ; putative ATPase D DGI_0486 hypothetical protein K06919 K06919; putative DNA primase/helicase D DGI_2003 hypothetical protein K07501 K07501; 3'-5' exonuclease D DGI_2446 putative transposase IS4 family protein K07481 K07481; transposase, IS5 family D DGI_1115 hypothetical protein K07484 K07484; transposase D DGI_1368 putative transposase K07488 K07488; transposase D DGI_3331 putative transposase K07488 K07488; transposase D DGI_0900 putative Sigma-70 region 4 type 2 K07488 K07488; transposase D DGI_0917 putative Transposase-like Mu K07497 K07497; putative transposase D DGI_2025 putative integrase catalytic subunit K07497 K07497; putative transposase D DGI_2394 putative integrase catalytic region K07497 K07497; putative transposase D DGI_2457 putative transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D DGI_1483 putative phage shock protein PspA K03969 pspA; phage shock protein A D DGI_0798 putative phage shock protein PspA (IM30) K03969 pspA; phage shock protein A D DGI_0932 hypothetical protein K07504 K07504; predicted type IV restriction endonuclease D DGI_0202 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D DGI_2143 putative phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D DGI_3101 putative Na+ dependent nucleoside transporter domain-containing protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D DGI_2560 putative CgeB family protein K06320 cgeB; spore maturation protein CgeB D DGI_0108 putative CgeB family protein K06320 cgeB; spore maturation protein CgeB D DGI_2986 hypothetical protein K06346 jag; spoIIIJ-associated protein D DGI_2727 putative peptidase M23 K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D DGI_2100 putative GTP-binding protein TypA K06207 typA; GTP-binding protein D DGI_2534 putative CBS domain pair family protein K07168 K07168; CBS domain-containing membrane protein D DGI_2721 putative PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D DGI_2903 putative PhoH family protein K07175 phoH2; PhoH-like ATPase D DGI_2433 putative thioredoxin-like protein K08481 kaiB; circadian clock protein KaiB D DGI_2434 putative KaiB-like protein 1 K08481 kaiB; circadian clock protein KaiB D DGI_2435 putative circadian clock protein KaiC K08482 kaiC; circadian clock protein KaiC D DGI_3186 putative nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D DGI_0049 lolA; putative outer membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein D DGI_2324 putative VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D DGI_0434 putative outer membrane chaperone Skp K06142 hlpA; outer membrane protein D DGI_4061 kpsS; Capsule polysaccharide biosynthesis K07265 kpsS; capsular polysaccharide export protein D DGI_4058 kpsC; Capsule polysaccharide biosynthesis protein K07266 kpsC; capsular polysaccharide export protein D DGI_2651 putative A/G-specific adenine glycosylase K07289 asmA; AsmA protein D DGI_0229 hypothetical protein K07340 ybbJ; inner membrane protein D DGI_2691 putative secretion protein HlyD family protein K01993 ABC-2.TX; HlyD family secretion protein D DGI_3129 putative RND family efflux transporter MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D DGI_2710 putative RND family efflux transporter MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D DGI_2216 ccmE; putative cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D DGI_1669 putative XRE family transcriptional regulator K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D DGI_1804 putative phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D DGI_1880 putative phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D DGI_0289 putative phosphate uptake regulator PhoU K02039 phoU; phosphate transport system protein D DGI_1609 putative CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein D DGI_0413 putative hemerythrin-like metal-binding protein K07216 hr; hemerythrin D DGI_2220 putative methyl-accepting chemotaxis sensory transducer K07216 hr; hemerythrin D DGI_0644 putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D DGI_2096 hypothetical protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur D DGI_3368 putative DsrE family protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur B B 09194 Poorly characterized C 99996 General function prediction only D DGI_3025 putative colicin V production family protein K03558 cvpA; membrane protein required for colicin V production D DGI_2366 putative baseplate assembly protein W K03791 K03791; putative chitinase D DGI_3354 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein D DGI_0874 putative protein of unknown function DUF1998 K06877 K06877; DEAD/DEAH box helicase domain-containing protein D DGI_1033 putative export-related chaperone CsaA K06878 K06878; tRNA-binding protein D DGI_3269 putative haloacid dehalogenase domain-containing protein hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D DGI_3529 putative ABC-type transport system involved in Fe-S cluster assembly, permease component K09014 sufB; Fe-S cluster assembly protein SufB D DGI_0119 putative ribonuclease BN K07058 K07058; membrane protein D DGI_1922 putative FxsA cytoplasmic membrane protein K07113 fxsA; UPF0716 protein FxsA D DGI_3103 putative LemA family protein K03744 lemA; LemA protein D DGI_1593 putative PhnA protein K06193 phnA; protein PhnA C 99997 Function unknown D DGI_0118 putative DRTGG domai protein K06873 K06873; uncharacterized protein D DGI_1635 putative protein of unknown function DUF255 K06888 K06888; uncharacterized protein D DGI_2549 hypothetical protein K06890 K06890; uncharacterized protein D DGI_2183 putative coenzyme A binding protein K06929 K06929; uncharacterized protein D DGI_3395 hypothetical protein K06934 K06934; uncharacterized protein D DGI_2184 hypothetical protein K06940 K06940; uncharacterized protein D DGI_1331 hypothetical protein K06940 K06940; uncharacterized protein D DGI_2764 hypothetical protein K06950 K06950; uncharacterized protein D DGI_3122 hypothetical protein K06960 K06960; uncharacterized protein D DGI_1156 putative hydrolase CocE/NonD family protein K06978 K06978; uncharacterized protein D DGI_0382 putative Glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein D DGI_0694 putative pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K07005 K07005; uncharacterized protein D DGI_2964 putative 4-vinyl reductase 4VR K07013 K07013; uncharacterized protein D DGI_2156 putative lactoylglutathione lyase K07032 K07032; uncharacterized protein D DGI_0706 putative GPR1/FUN34/yaaH family protein K07034 K07034; uncharacterized protein D DGI_1932 putative amidohydrolase K07045 K07045; uncharacterized protein D DGI_3363 putative metal-dependent hydrolase superfamily protein K07045 K07045; uncharacterized protein D DGI_3273 hypothetical protein K07071 K07071; uncharacterized protein D DGI_3348 putative nucleotidyltransferase family protein K07075 K07075; uncharacterized protein D DGI_1171 putative permease K07089 K07089; uncharacterized protein D DGI_1460 putative permease K07089 K07089; uncharacterized protein D DGI_1726 hypothetical protein K07090 K07090; uncharacterized protein D DGI_1792 hypothetical protein K07090 K07090; uncharacterized protein D DGI_0256 nuoP; putative permease K07090 K07090; uncharacterized protein D DGI_0548 putative protein of unknown function DUF81 K07090 K07090; uncharacterized protein D DGI_3037 hypothetical protein K07090 K07090; uncharacterized protein D DGI_2856 hypothetical protein K07090 K07090; uncharacterized protein D DGI_0465 putative phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein D DGI_1530 hypothetical protein K07096 K07096; uncharacterized protein D DGI_1544 hypothetical protein K07098 K07098; uncharacterized protein D DGI_3516 putative protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein D DGI_3517 putative protein of unknown function DUF395, YeeE/YedE K07112 K07112; uncharacterized protein D DGI_3209 hypothetical protein K07121 K07121; uncharacterized protein D DGI_0206 putative FAD dependent oxidoreductase K07137 K07137; uncharacterized protein D DGI_1449 putative 4Fe-4S ferredoxin iron-sulfur binding domain protein K07138 K07138; uncharacterized protein D DGI_0661 putative Radical SAM domain protein K07139 K07139; uncharacterized protein D DGI_2172 hypothetical protein K07150 K07150; uncharacterized protein D DGI_2784 hypothetical protein K07164 K07164; uncharacterized protein D DGI_2988 hypothetical protein K08998 K08998; uncharacterized protein D DGI_1833 putative protein of unknown function DUF151 K08999 K08999; uncharacterized protein D DGI_2511 hypothetical protein K09117 K09117; uncharacterized protein D DGI_3505 hypothetical protein K09131 K09131; uncharacterized protein D DGI_2771 putative protein of unknown function K09133 K09133; uncharacterized protein D DGI_1674 putative protein of unknown function K09138 K09138; uncharacterized protein D DGI_1645 putative AMMECR1 domain protein K09141 K09141; uncharacterized protein D DGI_0852 putative protein of unknown function DUF116 K09729 K09729; uncharacterized protein D DGI_3453 putative ApbE family lipoprotein K09740 K09740; uncharacterized protein D DGI_0105 hypothetical protein K09749 K09749; uncharacterized protein D DGI_3434 hypothetical protein K09749 K09749; uncharacterized protein D DGI_1663 putative protein of unknown function DUF309 K09763 K09763; uncharacterized protein D DGI_1558 hypothetical protein K09764 K09764; uncharacterized protein D DGI_0452 hypothetical protein K09791 K09791; uncharacterized protein D DGI_0193 putative membrane protein K09793 K09793; uncharacterized protein D DGI_2725 putative divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein D DGI_0237 hypothetical protein K09803 K09803; uncharacterized protein D DGI_0735 hypothetical protein K09857 K09857; uncharacterized protein D DGI_0580 hypothetical protein K09922 K09922; uncharacterized protein D DGI_2516 hypothetical protein K09928 K09928; uncharacterized protein D DGI_0696 hypothetical protein K09931 K09931; uncharacterized protein D DGI_1400 putative Protein of unknown function DUF2065 K09937 K09937; uncharacterized protein D DGI_1601 putative GumN family protein K09973 K09973; uncharacterized protein D DGI_2883 hypothetical protein K01163 K01163; uncharacterized protein D DGI_0814 hypothetical protein K07502 yprB; uncharacterized protein D DGI_2144 putative phosphate transport regulator K07220 K07220; uncharacterized protein D DGI_1561 hypothetical protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 6, 2024