+E	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Messenger RNA Biogenesis - Eurytemora affinis</h2>
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A<b>Eukaryotic type</b>
B  mRNA processing factors
C    5' end processing
D      Capping factors
E        111714547 mRNA cap guanine-N7 methyltransferase-like	K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] 
E        111706330 mRNA-capping enzyme-like	K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74] 
E        111710955 cyclin-dependent kinase 7-like	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        111706647 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1-like	K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57] 
E        111701188 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2-like	K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296] 
E        111708578 uncharacterized protein LOC111708578	K18708 FAM103A1; RNMT-activating mini protein 
D      Cap binding complex
E        111707575 nuclear cap-binding protein subunit 1-like	K12882 NCBP1; nuclear cap-binding protein subunit 1 
E        111714572 nuclear cap-binding protein subunit 2-like	K12883 NCBP2; nuclear cap-binding protein subunit 2 
C    3' end processing
D      Pre-mRNA cleavage factor Im (CFIm)
E        111706264 cleavage and polyadenylation specificity factor subunit 5-like	K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 
E        111717204 cleavage and polyadenylation specificity factor subunit 6-like	K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 
E        111701824 cleavage and polyadenylation specificity factor subunit 6-like	K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 
D      Pre-mRNA cleavage factor IIm (CFIIm)
E        111701702 polyribonucleotide 5'-hydroxyl-kinase Clp1-like	K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] 
E        111708169 LOW QUALITY PROTEIN: uncharacterized protein LOC111708169	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
D      Cleavage and polyadenylation specificity factor (CPSF) complex
E        111700958 cleavage and polyadenylation specificity factor subunit 1-like	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        111699050 LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 2-like	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        111704067 cleavage and polyadenylation specificity factor 73-like	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        111709752 cleavage and polyadenylation specificity factor subunit 4-like	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        111707560 pre-mRNA 3' end processing protein WDR33-like	K15542 PFS2; polyadenylation factor subunit 2 
E        111707566 pre-mRNA 3' end processing protein WDR33-like	K15542 PFS2; polyadenylation factor subunit 2 
E        111704724 WD repeat-containing protein 82-like	K14962 WDR82; COMPASS component SWD2 
E        111712853 WD repeat-containing protein 82-like isoform X1	K14962 WDR82; COMPASS component SWD2 
E        111703370 serine/threonine-protein phosphatase PP1-beta catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        111702541 serine/threonine-protein phosphatase alpha-2 isoform	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        111697763 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like isoform X1	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        111701984 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
D      Cleavage stimulation factor (CSTF) complex
E        111705121 cleavage stimulation factor subunit 1-like	K14406 CSTF1; cleavage stimulation factor subunit 1 
E        111703672 cleavage stimulation factor subunit 2-like	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        111710168 protein suppressor of forked-like	K14408 CSTF3; cleavage stimulation factor subunit 3 
E        111702817 symplekin-like	K06100 SYMPK; symplekin 
D      U7-dependent histone pre-mRNA processing factors
E        111713930 small nuclear ribonucleoprotein-associated protein B-like	K11086 SNRPB; small nuclear ribonucleoprotein B and B' 
E        111717513 small nuclear ribonucleoprotein-associated protein B-like	K11086 SNRPB; small nuclear ribonucleoprotein B and B' 
E        111715656 small nuclear ribonucleoprotein Sm D3-like	K11088 SNRPD3; small nuclear ribonucleoprotein D3 
E        111699818 small nuclear ribonucleoprotein Sm D3-like	K11088 SNRPD3; small nuclear ribonucleoprotein D3 
E        111715083 small nuclear ribonucleoprotein E-like	K11097 SNRPE; small nuclear ribonucleoprotein E 
E        111708128 U7 snRNA-associated Sm-like protein LSm10	K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10 
E        111703902 U7 snRNA-associated Sm-like protein LSm11	K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11 
E        111699050 LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 2-like	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        111704067 cleavage and polyadenylation specificity factor 73-like	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        111703672 cleavage stimulation factor subunit 2-like	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        111702817 symplekin-like	K06100 SYMPK; symplekin 
D      DRB sensitivity inducing factor (DSIF) complex
E        111701779 transcription elongation factor SPT4-A-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        111710053 transcription elongation factor SPT5-like	K15172 SUPT5H; transcription elongation factor SPT5 
D      N6-methyltransferase complex
E        111710437 LOW QUALITY PROTEIN: N6-adenosine-methyltransferase subunit METTL3-like	K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348] 
E        111704822 N6-adenosine-methyltransferase non-catalytic subunit-like	K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit 
E        111706847 methyltransferase-like protein 4 isoform X1	K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72] 
E        111709284 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase-like	K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] 
E        111699431 pre-mRNA-splicing regulator WTAP-like isoform X1	K22824 WTAP; pre-mRNA-splicing regulator WTAP 
E        111699716 protein virilizer-like	K22910 VIRMA; protein virilizer 
E        111714283 putative RNA-binding protein 15 isoform X1	K13190 RBM15; RNA-binding protein 15 
E        111714139 calponin homology domain-containing protein DDB_G0272472-like	K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 
E        111695836 trichohyalin-like	K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 
E        111695896 uncharacterized protein LOC111695896	K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 
E        111712811 uncharacterized protein LOC111712811	K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 
D      Poly(A) addition factors
E        111703579 poly(A) polymerase alpha-like isoform X1	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        111700834 poly(A) polymerase type 3-like	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        111698654 poly(A) RNA polymerase gld-2 homolog A-like	K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19] 
E        111711030 speckle targeted PIP5K1A-regulated poly(A) polymerase-like isoform X1	K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52] 
D      Negative regulators of mRNA 3' end processing
E        111705609 BRCA1-associated RING domain protein 1-like isoform X1	K10683 BARD1; BRCA1-associated RING domain protein 1 
E        111708126 RNA-binding protein 26-like isoform X1	K13192 RBM26; RNA-binding protein 26 
E        111697122 RNA demethylase ALKBH5-like	K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] 
E        111705164 TAR DNA-binding protein 43-like	K23600 TARDBP; TAR DNA-binding protein 43 
E        111707564 TAR DNA-binding protein 43-like	K23600 TARDBP; TAR DNA-binding protein 43 
E        111708846 TAR DNA-binding protein 43-like	K23600 TARDBP; TAR DNA-binding protein 43 
E        111700335 TAR DNA-binding protein 43-like	K23600 TARDBP; TAR DNA-binding protein 43 
C    Other processing factors
D      111696166 DNA/RNA-binding protein KIN17-like	K13102 KIN; DNA/RNA-binding protein KIN17 
D      111705344 methyltransferase-like protein 22 isoform X1	K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] 
D      111710229 methyltransferase-like protein 22 isoform X1	K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] 
D      111695020 glutamic acid-rich protein-like isoform X1	K23038 ZC3H14; zinc finger CCCH domain-containing protein 14 
D      111705265 serrate RNA effector molecule homolog isoform X1	K27103 SRRT; serrate RNA effector molecule 
B  mRNA surveillance and transport factors
C    Transport factors
D      EJC complex
E        111705502 RNA-binding protein 8A-like	K12876 RBM8A; RNA-binding protein 8A 
E        111706263 protein mago nashi homolog	K12877 MAGOH; protein mago nashi 
E        111707626 protein mago nashi homolog	K12877 MAGOH; protein mago nashi 
E        111704498 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        111704633 THO complex subunit 4-like isoform X1	K12881 THOC4; THO complex subunit 4 
E        111703416 spliceosome RNA helicase DDX39B-like	K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] 
E        111707924 spliceosome RNA helicase DDX39B-like	K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] 
E        111701272 eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        111713473 coiled-coil domain-containing protein 174-like	K25178 CCDC174; coiled-coil domain-containing protein 174 
E        111717196 protein CASC3-like	K14323 CASC3; protein CASC3 
E        111706526 probable histone deacetylase complex subunit SAP18 isoform X1	K14324 SAP18; histone deacetylase complex subunit SAP18 
E        111707397 myb-like protein X	K13114 PNN; pinin 
E        111696600 RNA-binding protein with serine-rich domain 1-A-like	K14325 RNPS1; RNA-binding protein with serine-rich domain 1 
E        111696913 serine/arginine repetitive matrix protein 1-like	K13171 SRRM1; serine/arginine repetitive matrix protein 1 
E        111698621 serine/arginine repetitive matrix protein 1-like isoform X1	K13171 SRRM1; serine/arginine repetitive matrix protein 1 
D      TREX complex
E        111716489 THO complex subunit 1-like	K12878 THOC1; THO complex subunit 1 
E        111699718 THO complex subunit 2-like	K12879 THOC2; THO complex subunit 2 
E        111699422 THO complex subunit 3-like	K12880 THOC3; THO complex subunit 3 
E        111704498 THO complex subunit 4-like	K12881 THOC4; THO complex subunit 4 
E        111704633 THO complex subunit 4-like isoform X1	K12881 THOC4; THO complex subunit 4 
E        111716491 THO complex subunit 5 homolog B-like	K13174 THOC5; THO complex subunit 5 
E        111716493 THO complex subunit 5 homolog	K13174 THOC5; THO complex subunit 5 
E        111695253 THO complex subunit 6 homolog	K13175 THOC6; THO complex subunit 6 
E        111701597 THO complex subunit 7 homolog	K13176 THOC7; THO complex subunit 7 
D      TREX-2 complex
E        111701389 PCI domain-containing protein 2-like isoform X1	K23801 PCID2; nuclear mRNA export protein PCID2/THP1 
E        111698210 uncharacterized protein LOC111698210 isoform X1	K10881 SHFM1; 26 proteasome complex subunit DSS1 
E        111695927 transcription and mRNA export factor ENY2-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        111706909 transcription and mRNA export factor ENY2-1-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
D      Nuclear pore complex
E        111704783 nucleoprotein TPR-like	K09291 TPR; nucleoprotein TPR 
E        111713590 mRNA export factor-like	K14298 RAE1; mRNA export factor 
E        111710848 protein SEC13 homolog	K14004 SEC13; protein transport protein SEC13 
E        111713454 nuclear pore complex protein Nup85-like	K14304 NUP85; nuclear pore complex protein Nup85 
E        111707273 nucleoporin Nup43-like isoform X1	K14305 NUP43; nuclear pore complex protein Nup43 
E        111694877 nuclear pore complex protein Nup50-like	K14295 NUP50; nuclear pore complex protein Nup50 
E        111709392 probable nucleoporin Nup54	K14308 NUP54; nuclear pore complex protein Nup54 
E        111715272 nuclear pore glycoprotein p62-like	K14306 NUP62; nuclear pore complex protein Nup62 
E        111698979 nuclear pore complex protein Nup88-like	K14318 NUP88; nuclear pore complex protein Nup88 
E        111696452 nuclear pore complex protein Nup93-like	K14309 NUP93; nuclear pore complex protein Nup93 
E        111707399 nuclear pore complex protein Nup98-Nup96-like	K14297 NUP98; nuclear pore complex protein Nup98-Nup96 
E        111697070 nuclear pore complex protein Nup107-like	K14301 NUP107; nuclear pore complex protein Nup107 
E        111707199 nuclear pore complex protein Nup133-like	K14300 NUP133; nuclear pore complex protein Nup133 
E        111715801 nucleoporin NUP188 homolog isoform X1	K14311 NUP188; nuclear pore complex protein Nup188 
E        111697259 nuclear pore complex protein Nup155-like	K14312 NUP155; nuclear pore complex protein Nup155 
E        111696960 nucleoporin NUP53-like isoform X1	K14313 NUP35; nuclear pore complex protein Nup53 
E        111705375 nuclear pore complex protein Nup205-like	K14310 NUP205; nuclear pore complex protein Nup205 
E        111709523 nuclear pore membrane glycoprotein 210-like	K14314 NUP210; nuclear pore complex protein Nup210 
E        111702403 nuclear pore complex protein Nup214-like	K14317 NUP214; nuclear pore complex protein Nup214 
E        111698544 ice-structuring glycoprotein-like	K14316 POM121; nuclear pore complex protein Nup121 
E        111707919 nucleoporin NDC1-like isoform X1	K14315 NDC1; nucleoporin NDC1 
E        111718138 nucleoporin SEH1-A-like	K14299 SEH1; nucleoporin SEH1 
E        111717028 E3 SUMO-protein ligase RanBP2-like isoform X1	K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-] 
E        111696399 aladin-like	K14320 AAAS; aladin 
E        111700737 nucleoporin-like protein 2	K18716 NUP42; nucleoporin NUP42 
E        111714777 nucleoporin GLE1-like	K18723 GLE1; nucleoporin GLE1 
E        111709757 nuclear RNA export factor 1-like	K14284 NXF; nuclear RNA export factor 
E        111714456 NTF2-related export protein 2-like	K14285 NXT1_2; NTF2-related export protein 1/2 
D      Ran-mediated transport factors
E        111713246 GTP-binding nuclear protein Ran-like	K07936 RAN; GTP-binding nuclear protein Ran 
E        111694848 GTP-binding nuclear protein Ran	K07936 RAN; GTP-binding nuclear protein Ran 
E        111702918 acidic leucine-rich nuclear phosphoprotein 32 family member B-like	K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D 
E        111709862 uncharacterized protein LOC111709862	K05475 TNFSF13; tumor necrosis factor ligand superfamily member 13 
E        111714072 ELAV-like protein 3 isoform X1	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        111695076 FAS-associated factor 2-like	K18726 FAF2; FAS-associated factor 2 
E        111715003 transitional endoplasmic reticulum ATPase isoform X1	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        111694731 protein-lysine methyltransferase METTL21D-like isoform X1	K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] 
E        111708328 exportin-1-like	K14290 XPO1; exportin-1 
E        111710923 exportin-7-like	K18460 XPO7; exportin-7 
D      eIF4F and regulatory proteins
E        111704030 eukaryotic translation initiation factor 4E-like	K03259 EIF4E; translation initiation factor 4E 
E        111706771 eukaryotic translation initiation factor 4E-1A-like	K03259 EIF4E; translation initiation factor 4E 
E        111698286 eukaryotic translation initiation factor 4E type 2-like isoform X1	K03259 EIF4E; translation initiation factor 4E 
E        111706269 eukaryotic initiation factor 4A-I-like	K03257 EIF4A; translation initiation factor 4A 
E        111697256 eukaryotic translation initiation factor 4 gamma 1-like	K03260 EIF4G; translation initiation factor 4G 
E        111706890 eukaryotic translation initiation factor 4 gamma 3-like	K03260 EIF4G; translation initiation factor 4G 
E        111699722 eukaryotic translation initiation factor 4 gamma 2-like	K03260 EIF4G; translation initiation factor 4G 
E        111695345 eukaryotic translation initiation factor 4B-like isoform X1	K03258 EIF4B; translation initiation factor 4B 
E        111714173 eukaryotic translation initiation factor 4H-like	K24086 EIF4H; translation initiation factor 4H 
E        111698080 eukaryotic translation initiation factor 4E-binding protein 3-like	K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2 
E        111706520 eukaryotic translation initiation factor 4E transporter-like isoform X1	K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter 
E        111716590 protein angel homolog 2-like isoform X1	K18729 ANGEL; protein angel 
E        111716593 uncharacterized protein LOC111716593	K18729 ANGEL; protein angel 
E        111704895 synaptic functional regulator FMR1-like	K15516 FMR; fragile X mental retardation protein 
E        111712226 cytoplasmic FMR1-interacting protein-like isoform X1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        111704886 gem-associated protein 5-like	K13133 GEMIN5; gem associated protein 5 
E        111703576 uncharacterized protein LOC111703576	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        111696463 cytoplasmic polyadenylation element-binding protein 1-like	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        111718408 cytoplasmic polyadenylation element-binding protein 2-like	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        111714340 ATP-dependent RNA helicase DDX3X-like	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        111713110 GRB10-interacting GYF protein 1-like isoform X1	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        111714583 polyadenylate-binding protein-like	K13126 PABPC; polyadenylate-binding protein 
E        111714587 polyadenylate-binding protein 4-like	K13126 PABPC; polyadenylate-binding protein 
E        111698193 polyadenylate-binding protein 1-A-like	K13126 PABPC; polyadenylate-binding protein 
E        111712400 polyadenylate-binding protein-interacting protein 1-like	K14322 PAIP1; polyadenylate-binding protein-interacting protein 1 
E        111710505 LOW QUALITY PROTEIN: helicase SKI2W-like	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        111705687 eukaryotic translation initiation factor 2D-like	K07575 MCTS; malignant T-cell-amplified sequence 
E        111716462 LOW QUALITY PROTEIN: malignant T-cell-amplified sequence 1-like	K07575 MCTS; malignant T-cell-amplified sequence 
E        111705672 eukaryotic translation initiation factor 2D-like	K24272 DENR; density-regulated protein 
E        111705946 density-regulated protein homolog	K24272 DENR; density-regulated protein 
D      APOBEC1-ACF complex
E        111713348 APOBEC1 complementation factor-like	K24978 A1CF; APOBEC1 complementation factor 
D      Other transport factors
E        111705685 partner of Y14 and mago-like	K14294 WIBG; partner of Y14 and mago 
E        111706371 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        111699253 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        111710357 glycine-rich RNA-binding protein 2-like	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        111695223 RNA-binding protein Musashi homolog Rbp6-like	K14411 MSI; RNA-binding protein Musashi 
E        111715411 RNA-binding protein Musashi homolog 1-like	K14411 MSI; RNA-binding protein Musashi 
E        111706621 RNA-binding protein Musashi homolog Rbp6-like	K14411 MSI; RNA-binding protein Musashi 
E        111717859 RNA-binding protein Musashi homolog Rbp6-like isoform X1	K14411 MSI; RNA-binding protein Musashi 
E        111717873 RNA-binding protein Musashi homolog Rbp6-like	K14411 MSI; RNA-binding protein Musashi 
E        111707517 heterogeneous nuclear ribonucleoprotein 27C-like	K14411 MSI; RNA-binding protein Musashi 
E        111702490 polyadenylate-binding protein RBP45-like	K14411 MSI; RNA-binding protein Musashi 
E        111714483 HBS1-like protein	K14416 HBS1; elongation factor 1 alpha-like protein 
E        111702900 protein pelota-like isoform X1	K06965 PELO; protein pelota 
E        111707743 polyadenylate-binding protein 2-B-like	K14396 PABPN1; polyadenylate-binding protein 2 
E        111716735 DEAD-box helicase Dbp80-like	K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] 
E        111698978 pre-mRNA-splicing factor SYF1-like	K12867 SYF1; pre-mRNA-splicing factor SYF1 
E        111699751 SAP domain-containing ribonucleoprotein-like	K18732 SARNP; SAP domain-containing ribonucleoprotein 
E        111712196 regulator of chromosome condensation-like	K11493 RCC1; regulator of chromosome condensation 
E        111711085 la-related protein 6-like	K18733 LARP6; la-related protein 6 
E        111713100 transcriptional activator protein Pur-beta-A-like	K21772 PURA; transcriptional activator protein Pur-alpha 
E        111698967 transcriptional activator protein Pur-alpha-like	K21772 PURA; transcriptional activator protein Pur-alpha 
E        111710605 nuclear localization sequence-binding protein-like	K22414 POLDIP3; polymerase delta-interacting protein 3 
E        111709869 leukocyte receptor cluster member 8 homolog	K23802 LENG8; SAC3 family protein LENG8/THP3 
C    Surveillance factors
D      Surveillance complex
E        111703600 eukaryotic peptide chain release factor subunit 1	K03265 ETF1; peptide chain release factor subunit 1 
E        111716297 eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like	K03267 ERF3; peptide chain release factor subunit 3 
E        111694883 LOW QUALITY PROTEIN: regulator of nonsense transcripts 1 homolog	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        111704888 LOW QUALITY PROTEIN: regulator of nonsense transcripts 2-like	K14327 UPF2; regulator of nonsense transcripts 2 
E        111717256 regulator of nonsense transcripts 3A-like	K14328 UPF3; regulator of nonsense transcripts 3 
D      Protein phosphatase 2A
E        111708654 serine/threonine-protein phosphatase 2A catalytic subunit beta isoform-like isoform X1	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        111709432 serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        111703469 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform-like isoform X1	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        111701969 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform-like	K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A 
E        111695995 protein phosphatase PP2A 55 kDa regulatory subunit-like	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        111703074 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta-like	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        111715370 uncharacterized protein LOC111715370	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        111701059 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        111714552 uncharacterized protein LOC111714552 isoform X1	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        111709040 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform-like isoform X1	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        111710138 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like isoform X1	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
D      Other surveillance factors
E        111704601 serine/threonine-protein kinase SMG1-like	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        111704604 serine/threonine-protein kinase SMG1-like	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        111698556 protein SMG5-like	K11125 SMG5; protein SMG5 
E        111709746 telomerase-binding protein EST1A-like	K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
E        111710744 protein SMG7-like	K14409 SMG7; protein SMG7 
E        111713761 protein SMG8-like	K18734 SMG8; protein SMG8 
E        111702120 protein SMG9-like	K18735 SMG9; protein SMG9 
E        111713110 GRB10-interacting GYF protein 1-like isoform X1	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        111714612 selenocysteine insertion sequence-binding protein 2-like	K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2 
E        111696770 probable ATP-dependent RNA helicase DHX34	K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6] 
E        111700697 GTP-binding protein 1-like	K24887 GTPBP1; GTP-binding protein 1 
C    Factors involved in mRNA localization
D      Cargo complex
E        111708819 pumilio homolog 3-like	K14844 PUF6; pumilio homology domain family member 6 
E        111715138 unconventional myosin-Va-like	K10357 MYO5; myosin V 
E        111713322 protein bicaudal D-like	K18739 BICD; protein bicaudal D 
E        111707986 piRNA biogenesis protein EXD1-like isoform X1	K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 
E        111708861 LOW QUALITY PROTEIN: uncharacterized protein LOC111708861	K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 
E        111699617 uncharacterized protein LOC111699617	K18740 EXD1; exonuclease 3'-5' domain-containing protein 1 
D      Factors that have mRNA localization signals
E        111713604 actin-5C-like isoform X1	K05692 ACTB_G1; actin beta/gamma 1 
E        111714159 actin-5C-like isoform X1	K05692 ACTB_G1; actin beta/gamma 1 
E        111695310 actin-5C-like	K05692 ACTB_G1; actin beta/gamma 1 
E        111695448 actin-5C-like	K05692 ACTB_G1; actin beta/gamma 1 
E        111695450 actin-5C-like	K05692 ACTB_G1; actin beta/gamma 1 
E        111695889 actin-5C-like	K05692 ACTB_G1; actin beta/gamma 1 
E        111705646 actin, clone 403	K05692 ACTB_G1; actin beta/gamma 1 
E        111698281 actin-5C-like	K05692 ACTB_G1; actin beta/gamma 1 
E        111711181 actin-5C-like	K05692 ACTB_G1; actin beta/gamma 1 
E        111711299 actin, clone 403-like	K05692 ACTB_G1; actin beta/gamma 1 
E        111711517 actin-5C-like	K05692 ACTB_G1; actin beta/gamma 1 
E        111712953 myc protein-like	K04377 MYC; Myc proto-oncogene protein 
E        111698550 transcriptional regulator Myc-like	K04377 MYC; Myc proto-oncogene protein 
E        111698610 myc proto-oncogene protein-like	K04377 MYC; Myc proto-oncogene protein 
E        111695509 enhancer of split mgamma protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        111695510 enhancer of split mbeta protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        111701798 enhancer of split mbeta protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        111701799 enhancer of split mdelta protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        111701800 enhancer of split mbeta protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        111701801 enhancer of split mbeta protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        111701803 enhancer of split mbeta protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        111701806 enhancer of split mbeta protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        111701808 enhancer of split mgamma protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
E        111701821 enhancer of split mgamma protein-like	K09090 HESN; hairy and enhancer of split, invertebrate 
D      Trans-acting binding proteins
E        111695804 far upstream element-binding protein 2-like	K13210 FUBP; far upstream element-binding protein 
E        111710029 far upstream element-binding protein 1-like	K13210 FUBP; far upstream element-binding protein 
E        111697183 elongation factor 1-alpha-like	K03231 EEF1A; elongation factor 1-alpha 
E        111697261 elongation factor 1-alpha	K03231 EEF1A; elongation factor 1-alpha 
E        111698504 elongation factor 1-gamma-like	K03233 EEF1G; elongation factor 1-gamma 
E        111697766 arf-GAP domain and FG repeat-containing protein 1-like isoform X1	K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1 
E        111716129 double-stranded RNA-binding protein Staufen homolog 2-like	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        111699655 double-stranded RNA-binding protein Staufen homolog 2-like isoform X1	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        111700007 polypyrimidine tract-binding protein 1-like	K13218 PTBP1; polypyrimidine tract-binding protein 1 
E        111702746 RNA-binding protein squid-like isoform X1	K03102 SQD; squid 
E        111706023 RNA-binding protein squid-like	K03102 SQD; squid 
E        111696937 RNA-binding protein squid-like	K03102 SQD; squid 
E        111709487 RNA-binding protein squid-like isoform X1	K03102 SQD; squid 
E        111702058 RNA-binding protein squid-like isoform X1	K03102 SQD; squid 
E        111703576 uncharacterized protein LOC111703576	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        111696463 cytoplasmic polyadenylation element-binding protein 1-like	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        111718408 cytoplasmic polyadenylation element-binding protein 2-like	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
D      Other mRNA localization factors
E        111704895 synaptic functional regulator FMR1-like	K15516 FMR; fragile X mental retardation protein 
E        111712226 cytoplasmic FMR1-interacting protein-like isoform X1	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        111713898 poly(rC)-binding protein 3-like isoform X1	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        111698120 poly(rC)-binding protein 3-like	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        111699794 poly(rC)-binding protein 3-like	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        111711977 poly(rC)-binding protein 2-like	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        111712777 poly(rC)-binding protein 3-like	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        111703270 Y-box factor homolog	K09276 YBX1; Y-box-binding protein 1 
E        111706331 sex-lethal homolog	K18747 SXL; protein sex-lethal 
C    mRNA cycle factors
D      Common to processing body (P body) and stress granule
E        111702847 5'-3' exoribonuclease 1-like	K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
E        111704341 protein argonaute-2-like	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        111715445 protein argonaute-4-like isoform X1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        111705704 protein argonaute-2-like	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        111711586 protein argonaute-2-like	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        111704030 eukaryotic translation initiation factor 4E-like	K03259 EIF4E; translation initiation factor 4E 
E        111706771 eukaryotic translation initiation factor 4E-1A-like	K03259 EIF4E; translation initiation factor 4E 
E        111698286 eukaryotic translation initiation factor 4E type 2-like isoform X1	K03259 EIF4E; translation initiation factor 4E 
E        111694883 LOW QUALITY PROTEIN: regulator of nonsense transcripts 1 homolog	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        111714340 ATP-dependent RNA helicase DDX3X-like	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        111701094 putative ATP-dependent RNA helicase me31b	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        111714494 RNA-binding protein MEX3B-like	K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
E        111708771 protein LSM14 homolog B-like isoform X1	K18749 LSM14; protein LSM14 
E        111703270 Y-box factor homolog	K09276 YBX1; Y-box-binding protein 1 
E        111710106 LIM domain-containing protein jub-like	K16682 AJUBA; LIM domain-containing protein 
E        111700704 putative helicase MOV-10 isoform X1	K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
E        111712315 transportin-1-like	K18752 TNPO1; transportin-1 
E        111704601 serine/threonine-protein kinase SMG1-like	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        111704604 serine/threonine-protein kinase SMG1-like	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        111698556 protein SMG5-like	K11125 SMG5; protein SMG5 
E        111709746 telomerase-binding protein EST1A-like	K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
E        111710744 protein SMG7-like	K14409 SMG7; protein SMG7 
E        111695369 uncharacterized protein LOC111695369	K15308 TTP; tristetraprolin 
E        111708742 uncharacterized protein LOC111708742 isoform X1	K18753 ZFP36L; butyrate response factor 
E        111702702 mRNA decay activator protein ZFP36L2-like	K18753 ZFP36L; butyrate response factor 
E        111706293 uncharacterized protein LOC111706293	K18754 LIN28; protein lin-28 
E        111707916 huntingtin-like	K04533 HD; huntingtin 
E        111698166 protein bicaudal C homolog 1-A-like	K18756 BICC1; protein bicaudal C 
E        111700891 LOW QUALITY PROTEIN: protein bicaudal C homolog 1-like	K18756 BICC1; protein bicaudal C 
E        111706371 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        111699253 heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        111710357 glycine-rich RNA-binding protein 2-like	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        111701604 cAMP-dependent protein kinase catalytic subunit isoform X1	K04345 PKA; protein kinase A [EC:2.7.11.11] 
E        111702584 la-related protein 1-like	K18757 LARP1; la-related protein 1 
E        111702600 la-related protein 1-like	K18757 LARP1; la-related protein 1 
E        111707829 ataxin-2 homolog	K23625 ATXN2_2L; ataxin 2/2L 
D      P-body specific factors
E        111708005 m7GpppN-mRNA hydrolase-like isoform X1	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        111711807 mRNA-decapping enzyme-like protein	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        111696381 U6 snRNA-associated Sm-like protein LSm1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        111713025 U6 snRNA-associated Sm-like protein LSm2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        111705457 U6 snRNA-associated Sm-like protein LSm3	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        111700975 U6 snRNA-associated Sm-like protein LSm4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        111695155 U6 snRNA-associated Sm-like protein LSm5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        111706818 U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        111714035 U6 snRNA-associated Sm-like protein LSm8	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
E        111699201 kinesin light chain-like	K10407 KLC; kinesin light chain 
E        111715138 unconventional myosin-Va-like	K10357 MYO5; myosin V 
E        111713149 tubulin alpha chain-like	K07374 TUBA; tubulin alpha 
E        111703976 tubulin alpha chain-like	K07374 TUBA; tubulin alpha 
E        111703993 tubulin alpha chain-like	K07374 TUBA; tubulin alpha 
E        111715258 tubulin alpha-3 chain-like	K07374 TUBA; tubulin alpha 
E        111697806 tubulin alpha-1 chain-like isoform X1	K07374 TUBA; tubulin alpha 
E        111697939 tubulin alpha chain-like	K07374 TUBA; tubulin alpha 
E        111698413 tubulin alpha chain-like	K07374 TUBA; tubulin alpha 
E        111698418 tubulin alpha chain-like	K07374 TUBA; tubulin alpha 
E        111698702 tubulin alpha-2 chain-like	K07374 TUBA; tubulin alpha 
E        111708457 tubulin alpha-1 chain	K07374 TUBA; tubulin alpha 
E        111709132 tubulin alpha-3 chain-like	K07374 TUBA; tubulin alpha 
E        111709134 tubulin alpha-3 chain-like	K07374 TUBA; tubulin alpha 
E        111700284 tubulin alpha chain-like	K07374 TUBA; tubulin alpha 
E        111710302 tubulin alpha-1 chain-like	K07374 TUBA; tubulin alpha 
E        111711356 tubulin alpha-3 chain-like	K07374 TUBA; tubulin alpha 
E        111703576 uncharacterized protein LOC111703576	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        111696463 cytoplasmic polyadenylation element-binding protein 1-like	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        111718408 cytoplasmic polyadenylation element-binding protein 2-like	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        111704886 gem-associated protein 5-like	K13133 GEMIN5; gem associated protein 5 
E        111699516 protein Gawky-like	K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
E        111717931 LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1-like	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        111704953 CCR4-NOT transcription complex subunit 2-like	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        111700596 uncharacterized protein LOC111700596	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        111700429 CCR4-NOT transcription complex subunit 3-like isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        111700151 CCR4-NOT transcription complex subunit 4-like isoform X1	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        111703682 LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 6-like	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        111699206 CCR4-NOT transcription complex subunit 7-like	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        111710119 CCR4-NOT transcription complex subunit 7-like	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        111697318 DIS3-like exonuclease 2	K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] 
E        111699738 PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
E        111718200 PAN2-PAN3 deadenylation complex subunit pan3-like isoform X1	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
E        111703597 protein BTG2-like	K14443 TOB; protein Tob/BTG 
E        111700245 protein Tob1-like	K14443 TOB; protein Tob/BTG 
E        111706520 eukaryotic translation initiation factor 4E transporter-like isoform X1	K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter 
E        111708903 uncharacterized protein LOC111708903	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
E        111711292 enhancer of mRNA-decapping protein 3-like	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        111698004 enhancer of mRNA-decapping protein 4-like	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        111704888 LOW QUALITY PROTEIN: regulator of nonsense transcripts 2-like	K14327 UPF2; regulator of nonsense transcripts 2 
E        111717256 regulator of nonsense transcripts 3A-like	K14328 UPF3; regulator of nonsense transcripts 3 
E        111713802 RING finger protein nhl-1-like	K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] 
E        111694766 E3 ubiquitin-protein ligase TRIM71-like isoform X1	K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] 
E        111694806 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        111713373 YTH domain-containing family protein 2-like	K20102 YTHDF; YTH domain-containing family protein 
D      Stress granule specific factors
E        111697972 nucleolysin TIA-1-like isoform X1	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        111708928 nucleolysin TIA-1-like isoform X1	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        111714583 polyadenylate-binding protein-like	K13126 PABPC; polyadenylate-binding protein 
E        111714587 polyadenylate-binding protein 4-like	K13126 PABPC; polyadenylate-binding protein 
E        111698193 polyadenylate-binding protein 1-A-like	K13126 PABPC; polyadenylate-binding protein 
E        111716129 double-stranded RNA-binding protein Staufen homolog 2-like	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        111699655 double-stranded RNA-binding protein Staufen homolog 2-like isoform X1	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        111704895 synaptic functional regulator FMR1-like	K15516 FMR; fragile X mental retardation protein 
E        111703714 ras GTPase-activating protein-binding protein 2-like	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        111709316 eukaryotic translation initiation factor 2A-like	K15026 EIF2A; translation initiation factor 2A 
E        111700655 eukaryotic translation initiation factor 3 subunit B-like	K03253 EIF3B; translation initiation factor 3 subunit B 
E        111706269 eukaryotic initiation factor 4A-I-like	K03257 EIF4A; translation initiation factor 4A 
E        111701272 eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        111695345 eukaryotic translation initiation factor 4B-like isoform X1	K03258 EIF4B; translation initiation factor 4B 
E        111697256 eukaryotic translation initiation factor 4 gamma 1-like	K03260 EIF4G; translation initiation factor 4G 
E        111706890 eukaryotic translation initiation factor 4 gamma 3-like	K03260 EIF4G; translation initiation factor 4G 
E        111699722 eukaryotic translation initiation factor 4 gamma 2-like	K03260 EIF4G; translation initiation factor 4G 
E        111714471 ribosomal protein S6 kinase 2 beta-like	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        111710865 LOW QUALITY PROTEIN: guanine nucleotide-binding protein subunit beta-like protein	K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein 
E        111709757 nuclear RNA export factor 1-like	K14284 NXF; nuclear RNA export factor 
E        111712264 histone deacetylase 6-like	K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] 
B  mRNA degradation factors
C    5'-3' decay
D      Decapping complex
E        111711807 mRNA-decapping enzyme-like protein	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        111708005 m7GpppN-mRNA hydrolase-like isoform X1	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        111701094 putative ATP-dependent RNA helicase me31b	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        111711292 enhancer of mRNA-decapping protein 3-like	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        111698004 enhancer of mRNA-decapping protein 4-like	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        111708903 uncharacterized protein LOC111708903	K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 
D      Lsm complex
E        111696381 U6 snRNA-associated Sm-like protein LSm1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        111713025 U6 snRNA-associated Sm-like protein LSm2	K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 
E        111705457 U6 snRNA-associated Sm-like protein LSm3	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        111700975 U6 snRNA-associated Sm-like protein LSm4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        111695155 U6 snRNA-associated Sm-like protein LSm5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        111706818 U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        111714035 U6 snRNA-associated Sm-like protein LSm8	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
D      5' exonucleases
E        111702847 5'-3' exoribonuclease 1-like	K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
E        111701376 5'-3' exoribonuclease 2 homolog	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        111711945 U8 snoRNA-decapping enzyme-like isoform X1	K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64] 
D      Other 5'-3' decay factors
E        111711782 uncharacterized protein LOC111711782	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
E        111711195 probable helicase with zinc finger domain isoform X1	K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] 
C    3'-5' decay
D      Core exosome factors
E        111704870 exosome complex component CSL4-like	K07573 CSL4; exosome complex component CSL4 
E        111697448 exosome complex component RRP4-like	K03679 RRP4; exosome complex component RRP4 
E        111701958 exosome complex component RRP40-like	K03681 RRP40; exosome complex component RRP40 
E        111704575 exosome complex component RRP41-like	K11600 RRP41; exosome complex component RRP41 
E        111696758 exosome complex component RRP46-like isoform X1	K12590 RRP46; exosome complex component RRP46 
E        111696759 exosome complex component RRP46-like	K12590 RRP46; exosome complex component RRP46 
E        111717610 exosome complex component MTR3-like	K12587 MTR3; exosome complex component MTR3 
E        111707401 exosome complex component MTR3-like	K12587 MTR3; exosome complex component MTR3 
E        111699448 exosome complex exonuclease RRP42-like	K12589 RRP42; exosome complex component RRP42 
E        111696390 exosome complex component RRP43-like	K12586 RRP43; exosome complex component RRP43 
E        111704209 uncharacterized protein LOC111704209	K03678 RRP45; exosome complex component RRP45 
D      Exosome cofactors
E        111706488 DIS3-like exonuclease 1	K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-] 
E        111700919 exosome component 10-like	K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] 
E        111710558 nuclear nucleic acid-binding protein C1D-like	K12592 C1D; exosome complex protein LRP1 
E        111706455 M-phase phosphoprotein 6-like	K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type 
E        111707807 probable ATP-dependent RNA helicase DDX60	K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7] 
D      TRAMP complex
E        111702754 non-canonical poly(A) RNA polymerase PAPD5-like	K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] 
E        111698938 superkiller viralicidic activity 2-like 2 isoform X1	K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] 
D      Ski complex
E        111710505 LOW QUALITY PROTEIN: helicase SKI2W-like	K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
E        111698765 tetratricopeptide repeat protein 37-like	K12600 SKI3; superkiller protein 3 
E        111698402 WD repeat-containing protein 61-like	K12602 WDR61; WD repeat-containing protein 61 
D      Ccr4-NOT complex
E        111703682 LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 6-like	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        111717931 LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1-like	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        111704953 CCR4-NOT transcription complex subunit 2-like	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        111700596 uncharacterized protein LOC111700596	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        111700429 CCR4-NOT transcription complex subunit 3-like isoform X1	K12580 CNOT3; CCR4-NOT transcription complex subunit 3 
E        111700151 CCR4-NOT transcription complex subunit 4-like isoform X1	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        111699206 CCR4-NOT transcription complex subunit 7-like	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        111710119 CCR4-NOT transcription complex subunit 7-like	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        111708510 CCR4-NOT transcription complex subunit 9-like	K12606 RCD1; CCR4-NOT transcription complex subunit 9 
E        111695097 CCR4-NOT transcription complex subunit 10-like	K12607 CNOT10; CCR4-NOT transcription complex subunit 10 
D      Pan complex
E        111699738 PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
E        111718200 PAN2-PAN3 deadenylation complex subunit pan3-like isoform X1	K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 
D      Other 3'-5' decay factors
E        111700215 poly(A)-specific ribonuclease PARN-like	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        111706958 ATP-dependent RNA helicase DHX36-like	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        111698870 ATP-dependent RNA helicase DHX36-like	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        111703597 protein BTG2-like	K14443 TOB; protein Tob/BTG 
E        111700245 protein Tob1-like	K14443 TOB; protein Tob/BTG 
E        111714947 nocturnin-like	K18764 NOCT; nocturnin [EC:3.1.3.108] 
E        111713483 3'-5' exoribonuclease 1-like	K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-] 
E        111700707 ERI1 exoribonuclease 2-like isoform X1	K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-] 
E        111711782 uncharacterized protein LOC111711782	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
E        111703207 2',5'-phosphodiesterase 12-like	K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] 
E        111711195 probable helicase with zinc finger domain isoform X1	K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] 
E        111715736 protein NRDE2 homolog	K26109 NRDE2; nuclear exosome regulator NRDE2 
E        111707795 focadhesin-like isoform X1	K27498 FOCAD; focadhesin 
C    Other degradation factors
D      RNases
E        111705628 uncharacterized protein LOC111705628	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
E        111696391 NEDD4-binding protein 1-like	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
#
A<b>Prokaryotic type</b>
B  Bacterial mRNA degradation factors
C    RNA degradosome components
D      Ribonucreases
E        111713157 ribonuclease 3-like isoform X1	K03685 rnc; ribonuclease III [EC:3.1.26.3] 
E        111706797 probable oligoribonuclease isoform X1	K13288 orn; oligoribonuclease [EC:3.1.-.-] 
D      Helicases
D      Other RNA degradosome components
E        111703831 enolase-like	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        111701109 polyribonucleotide nucleotidyltransferase 2, mitochondrial-like	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 
E        111715208 ATP-dependent 6-phosphofructokinase-like isoform X1	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
C    Other RNA degradation factors
D      Chaperones
E        111715061 heat shock 70 kDa protein cognate 5-like	K04043 dnaK; molecular chaperone DnaK 
E        111710630 60 kDa heat shock protein, mitochondrial-like	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
D      Others
D      Bacterial Small RNA Regulators
B  Archeal mRNA degradation factors
C    Exosome components
D      Core exosome
E        111697448 exosome complex component RRP4-like	K03679 RRP4; exosome complex component RRP4 
E        111704870 exosome complex component CSL4-like	K07573 CSL4; exosome complex component CSL4 
D      Cofactors
E        111704575 exosome complex component RRP41-like	K11600 RRP41; exosome complex component RRP41 
E        111699448 exosome complex exonuclease RRP42-like	K12589 RRP42; exosome complex component RRP42 
D      Others
!
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#Last updated: April 25, 2024