+E	Messenger RNA Biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Messenger RNA Biogenesis - Eurypyga helias (sunbittern)</h2>
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A<b>Eukaryotic type</b>
B  mRNA processing factors
C    5' end processing
D      Capping factors
E        104504359 RNMT; mRNA cap guanine-N7 methyltransferase	K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] 
E        104507118 cyclin-dependent kinase 7-like	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        104513900 CMTR1; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1	K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57] 
E        104502653 CMTR2; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2	K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296] 
E        104505330 FAM103A1; RNMT-activating mini protein	K18708 FAM103A1; RNMT-activating mini protein 
D      Cap binding complex
E        104513320 NCBP2; nuclear cap-binding protein subunit 2	K12883 NCBP2; nuclear cap-binding protein subunit 2 
E        104516003 LOW QUALITY PROTEIN: nuclear cap-binding protein subunit 2-like	K12883 NCBP2; nuclear cap-binding protein subunit 2 
C    3' end processing
D      Pre-mRNA cleavage factor Im (CFIm)
E        104516211 NUDT21; cleavage and polyadenylation specificity factor subunit 5	K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 
E        104504756 CPSF6; cleavage and polyadenylation specificity factor subunit 6	K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7 
D      Pre-mRNA cleavage factor IIm (CFIIm)
E        104503648 PCF11; pre-mRNA cleavage complex 2 protein Pcf11	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
D      Cleavage and polyadenylation specificity factor (CPSF) complex
E        104508740 CPSF2; cleavage and polyadenylation specificity factor subunit 2	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        104502961 CPSF3; cleavage and polyadenylation specificity factor subunit 3	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        104513122 CPSF4; cleavage and polyadenylation specificity factor subunit 4	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        104513410 FIP1L1; pre-mRNA 3'-end-processing factor FIP1	K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 
E        104516435 WDR33; pre-mRNA 3' end processing protein WDR33 isoform X1	K15542 PFS2; polyadenylation factor subunit 2 
E        104509341 WDR82; WD repeat-containing protein 82	K14962 WDR82; COMPASS component SWD2 
E        104512926 LOW QUALITY PROTEIN: serine/threonine-protein phosphatase PP1-gamma catalytic subunit-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        104513988 PPP1CB; serine/threonine-protein phosphatase PP1-beta catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        104515685 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
D      Cleavage stimulation factor (CSTF) complex
E        104508900 CSTF1; cleavage stimulation factor subunit 1	K14406 CSTF1; cleavage stimulation factor subunit 1 
E        104515712 LOW QUALITY PROTEIN: cleavage stimulation factor subunit 2-like	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        104516966 CSTF3; cleavage stimulation factor subunit 3	K14408 CSTF3; cleavage stimulation factor subunit 3 
D      U7-dependent histone pre-mRNA processing factors
E        104503781 small nuclear ribonucleoprotein-associated protein B'	K11086 SNRPB; small nuclear ribonucleoprotein B and B' 
E        104505028 SNRPD3; small nuclear ribonucleoprotein Sm D3	K11088 SNRPD3; small nuclear ribonucleoprotein D3 
E        104517158 LSM10; LOW QUALITY PROTEIN: U7 snRNA-associated Sm-like protein LSm10	K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10 
E        104508740 CPSF2; cleavage and polyadenylation specificity factor subunit 2	K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 
E        104502961 CPSF3; cleavage and polyadenylation specificity factor subunit 3	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        104515712 LOW QUALITY PROTEIN: cleavage stimulation factor subunit 2-like	K14407 CSTF2; cleavage stimulation factor subunit 2 
E        104509253 histone RNA hairpin-binding protein-like	K18710 SLBP; histone RNA hairpin-binding protein 
E        104515915 SLBP; histone RNA hairpin-binding protein	K18710 SLBP; histone RNA hairpin-binding protein 
E        104513530 CASP8AP2; CASP8-associated protein 2	K25593 CASP8AP2; CASP8-associated protein 2 
D      DRB sensitivity inducing factor (DSIF) complex
E        104508639 SUPT4H1; transcription elongation factor SPT4	K15171 SUPT4H1; transcription elongation factor SPT4 
D      N6-methyltransferase complex
E        104503352 METTL14; N6-adenosine-methyltransferase subunit METTL14	K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit 
E        104516295 METTL4; methyltransferase-like protein 4	K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72] 
E        104505578 LOW QUALITY PROTEIN: methyltransferase-like protein 16	K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] 
E        104504890 WTAP; pre-mRNA-splicing regulator WTAP	K22824 WTAP; pre-mRNA-splicing regulator WTAP 
E        104511915 KIAA1429; protein virilizer homolog	K22910 VIRMA; protein virilizer 
E        104516855 RBM15B; putative RNA-binding protein 15B	K13190 RBM15; RNA-binding protein 15 
E        104510494 ZC3H13; LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 13	K22909 ZC3H13; zinc finger CCCH domain-containing protein 13 
E        104513943 CBLL1; E3 ubiquitin-protein ligase Hakai	K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27] 
D      Poly(A) addition factors
E        104502623 poly(A) polymerase alpha	K14376 PAP; poly(A) polymerase [EC:2.7.7.19] 
E        104512542 PAPD4; poly(A) RNA polymerase GLD2	K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19] 
D      Negative regulators of mRNA 3' end processing
E        104506317 BARD1; LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1	K10683 BARD1; BRCA1-associated RING domain protein 1 
E        104510419 RBM26; RNA-binding protein 26	K13192 RBM26; RNA-binding protein 26 
E        104514042 FTO; alpha-ketoglutarate-dependent dioxygenase FTO	K19469 FTO; mRNA N6-methyladenine demethylase [EC:1.14.11.53] 
E        104504501 ALKBH5; RNA demethylase ALKBH5	K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53] 
E        104506388 TARDBP; LOW QUALITY PROTEIN: TAR DNA-binding protein 43	K23600 TARDBP; TAR DNA-binding protein 43 
C    Other processing factors
D      104502975 DHX40; probable ATP-dependent RNA helicase DHX40	K18711 DHX40; ATP-dependent RNA helicase DHX40 [EC:5.6.2.6] 
D      104502857 KIN; DNA/RNA-binding protein KIN17	K13102 KIN; DNA/RNA-binding protein KIN17 
D      104514303 METTL8; methyltransferase-like protein 8	K24975 METTL8; mRNA N(3)-methylcytidine methyltransferase METTL8 [EC:2.1.1.-] 
D      104511581 METTL22; methyltransferase-like protein 22	K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] 
D      104507400 FAM46A; protein FAM46A	K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-] 
D      104508073 FAM46C; protein FAM46C	K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19] 
D      104505371 protein FAM46C-like	K23035 TENT5D; terminal nucleotidyltransferase 5D [EC:2.7.7.19] 
D      104502940 ZC3H14; zinc finger CCCH domain-containing protein 14	K23038 ZC3H14; zinc finger CCCH domain-containing protein 14 
B  mRNA surveillance and transport factors
C    Transport factors
D      EJC complex
E        104517117 protein mago nashi homolog	K12877 MAGOH; protein mago nashi 
E        104503672 EIF4A3; eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        104503849 CCDC174; coiled-coil domain-containing protein 174	K25178 CCDC174; coiled-coil domain-containing protein 174 
E        104505926 CASC3; LOW QUALITY PROTEIN: protein CASC3	K14323 CASC3; protein CASC3 
E        104504443 SAP18; histone deacetylase complex subunit SAP18	K14324 SAP18; histone deacetylase complex subunit SAP18 
E        104511004 PNN; pinin	K13114 PNN; pinin 
E        104504645 RNPS1; RNA-binding protein with serine-rich domain 1	K14325 RNPS1; RNA-binding protein with serine-rich domain 1 
E        104505458 SRRM1; serine/arginine repetitive matrix protein 1	K13171 SRRM1; serine/arginine repetitive matrix protein 1 
D      TREX complex
E        104502524 THOC1; THO complex subunit 1	K12878 THOC1; THO complex subunit 1 
E        104509820 THOC2; THO complex subunit 2	K12879 THOC2; THO complex subunit 2 
E        104505593 THOC3; THO complex subunit 3	K12880 THOC3; THO complex subunit 3 
E        104505626 THOC5; THO complex subunit 5 homolog	K13174 THOC5; THO complex subunit 5 
E        104515677 THOC7; THO complex subunit 7 homolog isoform X1	K13176 THOC7; THO complex subunit 7 
D      TREX-2 complex
E        104505677 PCID2; PCI domain-containing protein 2	K23801 PCID2; nuclear mRNA export protein PCID2/THP1 
E        104512922 SHFM1; 26S proteasome complex subunit DSS1	K10881 SHFM1; 26 proteasome complex subunit DSS1 
E        104514329 ENY2; transcription and mRNA export factor ENY2	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        104514888 LOW QUALITY PROTEIN: centrin-2-like	K10840 CETN2; centrin-2 
E        104515020 centrin-3-like	K16466 CETN3; centrin-3 
E        104515653 MCM3AP; germinal-center associated nuclear protein	K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48] 
D      Nuclear pore complex
E        104507837 TPR; nucleoprotein TPR	K09291 TPR; nucleoprotein TPR 
E        104503000 RAE1; mRNA export factor	K14298 RAE1; mRNA export factor 
E        104516552 SEC13; protein SEC13 homolog	K14004 SEC13; protein transport protein SEC13 
E        104511538 NUP37; nucleoporin Nup37	K14302 NUP37; nuclear pore complex protein Nup37 
E        104503276 NUP85; nuclear pore complex protein Nup85	K14304 NUP85; nuclear pore complex protein Nup85 
E        104503782 NUP43; nucleoporin Nup43	K14305 NUP43; nuclear pore complex protein Nup43 
E        104513052 NUP50; nuclear pore complex protein Nup50	K14295 NUP50; nuclear pore complex protein Nup50 
E        104506343 NUP54; LOW QUALITY PROTEIN: nucleoporin p54	K14308 NUP54; nuclear pore complex protein Nup54 
E        104514281 NUP88; nuclear pore complex protein Nup88	K14318 NUP88; nuclear pore complex protein Nup88 
E        104509797 NUP93; nuclear pore complex protein Nup93	K14309 NUP93; nuclear pore complex protein Nup93 
E        104503074 NUP107; nuclear pore complex protein Nup107	K14301 NUP107; nuclear pore complex protein Nup107 
E        104512373 NUP188; nucleoporin NUP188 homolog	K14311 NUP188; nuclear pore complex protein Nup188 
E        104512944 nuclear pore complex protein Nup153-like	K14296 NUP153; nuclear pore complex protein Nup153 
E        104513218 NUP155; nuclear pore complex protein Nup155 isoform X1	K14312 NUP155; nuclear pore complex protein Nup155 
E        104516811 NUP160; nuclear pore complex protein Nup160	K14303 NUP160; nuclear pore complex protein Nup160 
E        104510439 LOW QUALITY PROTEIN: nucleoporin NUP53-like	K14313 NUP35; nuclear pore complex protein Nup53 
E        104506369 NUP35; nucleoporin NUP53	K14313 NUP35; nuclear pore complex protein Nup53 
E        104506072 NUP205; nuclear pore complex protein Nup205	K14310 NUP205; nuclear pore complex protein Nup205 
E        104502510 NUP210; nuclear pore membrane glycoprotein 210	K14314 NUP210; nuclear pore complex protein Nup210 
E        104515354 NUP214; nuclear pore complex protein Nup214	K14317 NUP214; nuclear pore complex protein Nup214 
E        104515090 NUPL2; nucleoporin-like protein 2	K14321 NUPL2; nucleoporin-like protein 2 
E        104503414 NDC1; nucleoporin NDC1	K14315 NDC1; nucleoporin NDC1 
E        104503706 SEH1L; nucleoporin SEH1	K14299 SEH1; nucleoporin SEH1 
E        104509010 RANBP2; E3 SUMO-protein ligase RanBP2	K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-] 
E        104509033 sentrin-specific protease 2-like	K03345 SENP2; sentrin-specific protease 2 (axin associating molecule) [EC:3.4.22.68] 
E        104515020 centrin-3-like	K16466 CETN3; centrin-3 
E        104506756 GLE1; nucleoporin GLE1	K18723 GLE1; nucleoporin GLE1 
E        104502893 NTF2-related export protein 2	K14285 NXT1_2; NTF2-related export protein 1/2 
D      Ran-mediated transport factors
E        104508362 RAN; GTP-binding nuclear protein Ran	K07936 RAN; GTP-binding nuclear protein Ran 
E        104504606 acidic leucine-rich nuclear phosphoprotein 32 family member B isoform X1	K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B 
E        104514157 ELAVL1; ELAV-like protein 1	K13088 ELAVL1; ELAV-like protein 1 
E        104514917 ELAVL4; ELAV-like protein 4 isoform X1	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        104515613 ELAVL2; ELAV-like protein 2 isoform X1	K13208 ELAVL2_3_4; ELAV like protein 2/3/4 
E        104506799 FAF2; FAS-associated factor 2	K18726 FAF2; FAS-associated factor 2 
E        104502621 VCP; transitional endoplasmic reticulum ATPase	K13525 VCP; transitional endoplasmic reticulum ATPase 
E        104516658 XPO1; exportin-1	K14290 XPO1; exportin-1 
E        104517098 XPO7; exportin-7	K18460 XPO7; exportin-7 
E        104503426 ran-binding protein 17-like	K24115 RANBP17; Ran-binding protein 17 
E        104515193 RANGAP1; ran GTPase-activating protein 1	K14319 RANGAP1; Ran GTPase-activating protein 1 
E        104503690 TAF15; TATA-binding protein-associated factor 2N	K14651 TAF15; transcription initiation factor TFIID subunit 15 
D      eIF4F and regulatory proteins
E        104505005 EIF4E; eukaryotic translation initiation factor 4E	K03259 EIF4E; translation initiation factor 4E 
E        104504189 EIF4E2; eukaryotic translation initiation factor 4E type 2	K03259 EIF4E; translation initiation factor 4E 
E        104503003 eukaryotic translation initiation factor 4E-like	K03259 EIF4E; translation initiation factor 4E 
E        104509461 EIF4A2; eukaryotic initiation factor 4A-II	K03257 EIF4A; translation initiation factor 4A 
E        104517254 EIF4G3; eukaryotic translation initiation factor 4 gamma 3	K03260 EIF4G; translation initiation factor 4G 
E        104503601 EIF4G2; eukaryotic translation initiation factor 4 gamma 2	K03260 EIF4G; translation initiation factor 4G 
E        104511840 EIF4G1; LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4 gamma 1	K03260 EIF4G; translation initiation factor 4G 
E        104507025 EIF4H; eukaryotic translation initiation factor 4H	K24086 EIF4H; translation initiation factor 4H 
E        104508995 EIF4EBP1; eukaryotic translation initiation factor 4E-binding protein 1	K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1 
E        104505673 EIF4ENIF1; LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4E transporter	K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter 
E        104508838 ANGEL2; protein angel homolog 2 isoform X1	K18729 ANGEL; protein angel 
E        104504342 ANGEL1; protein angel homolog 1	K18729 ANGEL; protein angel 
E        104506141 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X1	K15516 FMR; fragile X mental retardation protein 
E        104513706 cytoplasmic FMR1-interacting protein 2	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        104511481 GEMIN5; LOW QUALITY PROTEIN: gem-associated protein 5	K13133 GEMIN5; gem associated protein 5 
E        104510803 TACC3; transforming acidic coiled-coil-containing protein 3	K14283 TACC3; transforming acidic coiled-coil-containing protein 3 
E        104517347 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        104505467 CPEB4; cytoplasmic polyadenylation element-binding protein 4	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        104511949 ATP-dependent RNA helicase DDX3X	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        104509376 GIGYF2; LOW QUALITY PROTEIN: PERQ amino acid-rich with GYF domain-containing protein 2	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        104512389 PABPC1; polyadenylate-binding protein 1	K13126 PABPC; polyadenylate-binding protein 
E        104506119 PABPC4; polyadenylate-binding protein 4 isoform X1	K13126 PABPC; polyadenylate-binding protein 
E        104505325 PAIP2; polyadenylate-binding protein-interacting protein 2	K27470 PAIP2; polyadenylate-binding protein-interacting protein 2 
E        104506005 PAIP2B; polyadenylate-binding protein-interacting protein 2B	K27470 PAIP2; polyadenylate-binding protein-interacting protein 2 
E        104515243 DEAF1; deformed epidermal autoregulatory factor 1 homolog	K23041 DEAF1; deformed epidermal autoregulatory factor 1 
E        104504252 MCTS1; malignant T-cell-amplified sequence 1	K07575 MCTS; malignant T-cell-amplified sequence 
E        104504433 DENR; density-regulated protein	K24272 DENR; density-regulated protein 
D      APOBEC1-ACF complex
E        104513938 C->U-editing enzyme APOBEC-1-like	K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36] 
E        104515546 C->U-editing enzyme APOBEC-1-like	K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36] 
E        104510863 A1CF; APOBEC1 complementation factor isoform X1	K24978 A1CF; APOBEC1 complementation factor 
D      Other transport factors
E        104508928 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        104509217 DAZAP1; DAZ-associated protein 1	K14411 MSI; RNA-binding protein Musashi 
E        104504892 LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog 1-like	K14411 MSI; RNA-binding protein Musashi 
E        104512628 uncharacterized protein LOC104512628	K14416 HBS1; elongation factor 1 alpha-like protein 
E        104503952 HBS1L; HBS1-like protein	K14416 HBS1; elongation factor 1 alpha-like protein 
E        104508207 PELO; protein pelota homolog	K06965 PELO; protein pelota 
E        104508370 embryonic polyadenylate-binding protein 2-B-like	K14396 PABPN1; polyadenylate-binding protein 2 
E        104507973 ATP-dependent RNA helicase DDX19B isoform X1	K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] 
E        104512468 LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX25-like	K18656 DDX25; ATP-dependent RNA helicase DDX25 [EC:5.6.2.7] 
E        104511746 RCC1; LOW QUALITY PROTEIN: regulator of chromosome condensation	K11493 RCC1; regulator of chromosome condensation 
E        104505381 LARP6; la-related protein 6	K18733 LARP6; la-related protein 6 
E        104509833 la-related protein 6-like	K18733 LARP6; la-related protein 6 
E        104504510 POLDIP3; LOW QUALITY PROTEIN: polymerase delta-interacting protein 3	K22414 POLDIP3; polymerase delta-interacting protein 3 
E        104507227 zinc finger CCCH domain-containing protein 11A-like	K22415 ZC3H11; zinc finger CCCH domain-containing protein 11 
E        104504179 protein PAT1 homolog 2-like	K24823 PATL2; protein PAT1 homolog 2 
C    Surveillance factors
D      Surveillance complex
E        104506442 ETF1; eukaryotic peptide chain release factor subunit 1	K03265 ETF1; peptide chain release factor subunit 1 
E        104503670 eukaryotic peptide chain release factor GTP-binding subunit ERF3A	K03267 ERF3; peptide chain release factor subunit 3 
E        104503574 UPF1; regulator of nonsense transcripts 1	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        104505432 UPF2; regulator of nonsense transcripts 2	K14327 UPF2; regulator of nonsense transcripts 2 
E        104504192 UPF3B; regulator of nonsense transcripts 3B	K14328 UPF3; regulator of nonsense transcripts 3 
E        104515263 UPF3A; regulator of nonsense transcripts 3A	K14328 UPF3; regulator of nonsense transcripts 3 
D      Protein phosphatase 2A
E        104512390 PPP2CA; serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        104504972 serine/threonine-protein phosphatase 2A catalytic subunit beta isoform-like	K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] 
E        104508102 LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform-like	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        104511010 PPP2R2A; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        104506437 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform	K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B 
E        104508243 PPP2R3B; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        104514796 PPP2R3A; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        104503425 PPP2R3C; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma	K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' 
E        104509127 PPP2R5A; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        104514576 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
E        104510255 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform	K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' 
D      Other surveillance factors
E        104506906 SMG1; serine/threonine-protein kinase SMG1	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        104512853 SMG6; LOW QUALITY PROTEIN: telomerase-binding protein EST1A	K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
E        104513882 SMG7; LOW QUALITY PROTEIN: protein SMG7	K14409 SMG7; protein SMG7 
E        104506850 SMG8; protein SMG8	K18734 SMG8; protein SMG8 
E        104509376 GIGYF2; LOW QUALITY PROTEIN: PERQ amino acid-rich with GYF domain-containing protein 2	K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
E        104505845 SECISBP2; selenocysteine insertion sequence-binding protein 2	K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2 
E        104513967 SECISBP2L; selenocysteine insertion sequence-binding protein 2-like	K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2 
E        104514750 GTPBP1; GTP-binding protein 1	K24887 GTPBP1; GTP-binding protein 1 
C    Factors involved in mRNA localization
D      Cargo complex
E        104512234 pumilio domain-containing protein KIAA0020 homolog	K14844 PUF6; pumilio homology domain family member 6 
E        104507296 unconventional myosin-Vb-like	K10357 MYO5; myosin V 
E        104513638 MYO5A; unconventional myosin-Va	K10357 MYO5; myosin V 
E        104513284 BICD2; protein bicaudal D homolog 2	K18739 BICD; protein bicaudal D 
E        104511953 BICD1; protein bicaudal D homolog 1	K18739 BICD; protein bicaudal D 
D      Factors that have mRNA localization signals
E        104505299 actin, cytoplasmic type 5 isoform X1	K05692 ACTB_G1; actin beta/gamma 1 
E        104515004 MBP; myelin basic protein isoform X1	K17269 MBP; myelin basic protein 
E        104516806 VIM; vimentin	K07606 VIM; vimentin 
E        104503569 GDF3; growth/differentiation factor 3	K05495 GDF1; growth differentiation factor 1 
E        104517368 T-box-containing protein TBX6L	K10180 TBX6; T-box protein 6 
D      Trans-acting binding proteins
E        104513204 FUBP1; far upstream element-binding protein 1	K13210 FUBP; far upstream element-binding protein 
E        104502841 FUBP3; far upstream element-binding protein 3	K13210 FUBP; far upstream element-binding protein 
E        104504385 EEF1A2; elongation factor 1-alpha 2	K03231 EEF1A; elongation factor 1-alpha 
E        104508715 EEF1A1; elongation factor 1-alpha 1	K03231 EEF1A; elongation factor 1-alpha 
E        104503961 HNRNPA2B1; heterogeneous nuclear ribonucleoproteins A2/B1	K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1 
E        104504399 AGFG1; arf-GAP domain and FG repeat-containing protein 1	K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1 
E        104513567 STAU1; double-stranded RNA-binding protein Staufen homolog 1 isoform X1	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        104510664 double-stranded RNA-binding protein Staufen homolog 2-like	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        104513825 PTBP1; polypyrimidine tract-binding protein 1	K13218 PTBP1; polypyrimidine tract-binding protein 1 
E        104517347 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        104505467 CPEB4; cytoplasmic polyadenylation element-binding protein 4	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
D      Other mRNA localization factors
E        104506141 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X1	K15516 FMR; fragile X mental retardation protein 
E        104513706 cytoplasmic FMR1-interacting protein 2	K05749 CYFIP; cytoplasmic FMR1 interacting protein 
E        104508487 poly(rC)-binding protein 3-like	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        104508616 PCBP3; poly(rC)-binding protein 3	K21444 PCBP3_4; poly(rC)-binding protein 3/4 
E        104510970 caprin-1-like	K18743 CAPRIN1; caprin-1 
E        104503298 CAPRIN2; caprin-2 isoform X1	K18744 CAPRIN2; caprin-2 
C    mRNA cycle factors
D      Common to processing body (P body) and stress granule
E        104505815 XRN1; 5'-3' exoribonuclease 1	K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
E        104512770 protein argonaute-1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        104509760 LOW QUALITY PROTEIN: protein argonaute-2-like	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        104510424 AGO3; protein argonaute-3 isoform X1	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        104503532 AGO4; protein argonaute-4	K11593 ELF2C; eukaryotic translation initiation factor 2C 
E        104505005 EIF4E; eukaryotic translation initiation factor 4E	K03259 EIF4E; translation initiation factor 4E 
E        104504189 EIF4E2; eukaryotic translation initiation factor 4E type 2	K03259 EIF4E; translation initiation factor 4E 
E        104503003 eukaryotic translation initiation factor 4E-like	K03259 EIF4E; translation initiation factor 4E 
E        104503574 UPF1; regulator of nonsense transcripts 1	K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
E        104511949 ATP-dependent RNA helicase DDX3X	K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
E        104515461 DDX6; probable ATP-dependent RNA helicase DDX6	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        104505752 LOW QUALITY PROTEIN: RNA-binding E3 ubiquitin-protein ligase MEX3C-like	K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
E        104506493 LSM14B; protein LSM14 homolog B	K18749 LSM14; protein LSM14 
E        104503728 LSM14A; protein LSM14 homolog A	K18749 LSM14; protein LSM14 
E        104513938 C->U-editing enzyme APOBEC-1-like	K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36] 
E        104515546 C->U-editing enzyme APOBEC-1-like	K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36] 
E        104505177 PNRC2; proline-rich nuclear receptor coactivator 2	K18751 PNRC2; proline-rich nuclear receptor coactivator 2 
E        104506906 SMG1; serine/threonine-protein kinase SMG1	K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
E        104512853 SMG6; LOW QUALITY PROTEIN: telomerase-binding protein EST1A	K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
E        104513882 SMG7; LOW QUALITY PROTEIN: protein SMG7	K14409 SMG7; protein SMG7 
E        104512123 protein lin-28 homolog A-like	K18754 LIN28; protein lin-28 
E        104517236 LOW QUALITY PROTEIN: protein lin-28 homolog B-like	K18754 LIN28; protein lin-28 
E        104509107 HTT; huntingtin	K04533 HD; huntingtin 
E        104514158 IPO8; importin-8	K18755 IPO8; importin-8 
E        104512988 BICC1; protein bicaudal C homolog 1	K18756 BICC1; protein bicaudal C 
E        104508928 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3	K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
E        104506854 cAMP-dependent protein kinase catalytic subunit beta	K04345 PKA; protein kinase A [EC:2.7.11.11] 
E        104517265 LARP1; LOW QUALITY PROTEIN: la-related protein 1	K18757 LARP1; la-related protein 1 
E        104503958 LARP1B; LOW QUALITY PROTEIN: la-related protein 1B	K18757 LARP1; la-related protein 1 
E        104516649 ATXN2; ataxin-2	K23625 ATXN2_2L; ataxin 2/2L 
D      P-body specific factors
E        104516461 DCP2; m7GpppN-mRNA hydrolase	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        104508226 DCP1A; LOW QUALITY PROTEIN: mRNA-decapping enzyme 1A	K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-] 
E        104507683 DCP1B; LOW QUALITY PROTEIN: mRNA-decapping enzyme 1B	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        104514389 LSM1; U6 snRNA-associated Sm-like protein LSm1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        104508839 LSM3; U6 snRNA-associated Sm-like protein LSm3	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        104506367 LSM4; U6 snRNA-associated Sm-like protein LSm4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        104503250 LSM5; U6 snRNA-associated Sm-like protein LSm5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        104505319 LSM6; U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        104516118 LSM7; U6 snRNA-associated Sm-like protein LSm7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        104505199 LSM8; LSM8 homolog, U6 small nuclear RNA associated	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
E        104514316 KLC1; kinesin light chain 1 isoform X1	K10407 KLC; kinesin light chain 
E        104514672 kinesin light chain 1-like	K10407 KLC; kinesin light chain 
E        104507296 unconventional myosin-Vb-like	K10357 MYO5; myosin V 
E        104513638 MYO5A; unconventional myosin-Va	K10357 MYO5; myosin V 
E        104504589 tubulin alpha-8 chain	K07374 TUBA; tubulin alpha 
E        104514915 TUBA8; tubulin alpha-8 chain isoform X1	K07374 TUBA; tubulin alpha 
E        104504454 tubulin alpha-3 chain	K07374 TUBA; tubulin alpha 
E        104517347 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X1	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        104505467 CPEB4; cytoplasmic polyadenylation element-binding protein 4	K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
E        104511481 GEMIN5; LOW QUALITY PROTEIN: gem-associated protein 5	K13133 GEMIN5; gem associated protein 5 
E        104510803 TACC3; transforming acidic coiled-coil-containing protein 3	K14283 TACC3; transforming acidic coiled-coil-containing protein 3 
E        104503966 TNRC6C; trinucleotide repeat-containing gene 6C protein	K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
E        104514987 TNRC6A; trinucleotide repeat-containing gene 6A protein	K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
E        104516335 LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 6B protein-like	K18412 TNRC6; trinucleotide repeat-containing gene 6 protein 
E        104505678 LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1-like	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        104515457 CNOT2; CCR4-NOT transcription complex subunit 2	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        104506199 CNOT4; CCR4-NOT transcription complex subunit 4 isoform X1	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        104503809 CNOT6; CCR4-NOT transcription complex subunit 6	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        104503143 CNOT6L; CCR4-NOT transcription complex subunit 6-like isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        104514466 CNOT7; CCR4-NOT transcription complex subunit 7	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        104511482 CNOT8; CCR4-NOT transcription complex subunit 8 isoform X1	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        104517348 uncharacterized protein KIAA0355 homolog	K26671 GARRE1; granule associated Rac and RHOG effector protein 1 
E        104506040 DIS3L2; DIS3-like exonuclease 2	K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] 
E        104510512 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit PAN2	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
E        104512517 TOB1; protein Tob1	K14443 TOB; protein Tob/BTG 
E        104512826 BTG4; protein BTG4	K14443 TOB; protein Tob/BTG 
E        104502851 BTG1; protein BTG1	K14443 TOB; protein Tob/BTG 
E        104508676 BTG2; protein BTG2	K14443 TOB; protein Tob/BTG 
E        104502861 protein BTG1-like	K14443 TOB; protein Tob/BTG 
E        104516815 TOB2; protein Tob2	K14443 TOB; protein Tob/BTG 
E        104505673 EIF4ENIF1; LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4E transporter	K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter 
E        104515805 EDC3; enhancer of mRNA-decapping protein 3	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        104514656 EDC4; enhancer of mRNA-decapping protein 4	K12616 EDC4; enhancer of mRNA-decapping protein 4 
E        104505432 UPF2; regulator of nonsense transcripts 2	K14327 UPF2; regulator of nonsense transcripts 2 
E        104504192 UPF3B; regulator of nonsense transcripts 3B	K14328 UPF3; regulator of nonsense transcripts 3 
E        104515263 UPF3A; regulator of nonsense transcripts 3A	K14328 UPF3; regulator of nonsense transcripts 3 
E        104510380 TRIM71; LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM71	K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] 
E        104506985 EIF2AK2; interferon-induced, double-stranded RNA-activated protein kinase	K16195 EIF2AK2; eukaryotic translation initiation factor 2-alpha kinase 2 [EC:2.7.11.1] 
E        104504619 ZAR1L; ZAR1-like protein	K18762 ZAR1; zygote arrest protein 1 
E        104505152 YTHDF3; YTH domain-containing family protein 3 isoform X1	K20102 YTHDF; YTH domain-containing family protein 
E        104505088 YTHDF1; YTH domain-containing family protein 1	K20102 YTHDF; YTH domain-containing family protein 
D      Stress granule specific factors
E        104503844 nucleolysin TIAR	K13201 TIA1; nucleolysin TIA-1/TIAR 
E        104512389 PABPC1; polyadenylate-binding protein 1	K13126 PABPC; polyadenylate-binding protein 
E        104506119 PABPC4; polyadenylate-binding protein 4 isoform X1	K13126 PABPC; polyadenylate-binding protein 
E        104513567 STAU1; double-stranded RNA-binding protein Staufen homolog 1 isoform X1	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        104510664 double-stranded RNA-binding protein Staufen homolog 2-like	K17597 STAU; double-stranded RNA-binding protein Staufen 
E        104506141 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X1	K15516 FMR; fragile X mental retardation protein 
E        104514157 ELAVL1; ELAV-like protein 1	K13088 ELAVL1; ELAV-like protein 1 
E        104506596 G3BP1; ras GTPase-activating protein-binding protein 1 isoform X1	K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3] 
E        104503538 ras GTPase-activating protein-binding protein 2-like	K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
E        104506099 EIF2A; eukaryotic translation initiation factor 2A	K15026 EIF2A; translation initiation factor 2A 
E        104503827 EIF3B; eukaryotic translation initiation factor 3 subunit B	K03253 EIF3B; translation initiation factor 3 subunit B 
E        104509461 EIF4A2; eukaryotic initiation factor 4A-II	K03257 EIF4A; translation initiation factor 4A 
E        104503672 EIF4A3; eukaryotic initiation factor 4A-III	K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
E        104517254 EIF4G3; eukaryotic translation initiation factor 4 gamma 3	K03260 EIF4G; translation initiation factor 4G 
E        104503601 EIF4G2; eukaryotic translation initiation factor 4 gamma 2	K03260 EIF4G; translation initiation factor 4G 
E        104511840 EIF4G1; LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4 gamma 1	K03260 EIF4G; translation initiation factor 4G 
E        104507004 RPS6KA2; ribosomal protein S6 kinase alpha-2	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        104507490 RPS6KA1; ribosomal protein S6 kinase alpha-1	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        104506377 RPS6KA6; ribosomal protein S6 kinase alpha-6	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        104511743 RPS6KA3; ribosomal protein S6 kinase alpha-3 isoform X1	K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
E        104516843 guanine nucleotide-binding protein subunit beta-2-like 1	K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein 
E        104513443 TRAF2; TNF receptor-associated factor 2 isoform X1	K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27] 
E        104509850 LARP4; LOW QUALITY PROTEIN: la-related protein 4	K18763 LARP4; la-related protein 4 
B  mRNA degradation factors
C    5'-3' decay
D      Decapping complex
E        104508226 DCP1A; LOW QUALITY PROTEIN: mRNA-decapping enzyme 1A	K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-] 
E        104507683 DCP1B; LOW QUALITY PROTEIN: mRNA-decapping enzyme 1B	K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-] 
E        104516461 DCP2; m7GpppN-mRNA hydrolase	K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] 
E        104515461 DDX6; probable ATP-dependent RNA helicase DDX6	K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
E        104515805 EDC3; enhancer of mRNA-decapping protein 3	K12615 EDC3; enhancer of mRNA-decapping protein 3 
E        104514656 EDC4; enhancer of mRNA-decapping protein 4	K12616 EDC4; enhancer of mRNA-decapping protein 4 
D      Lsm complex
E        104514389 LSM1; U6 snRNA-associated Sm-like protein LSm1	K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 
E        104508839 LSM3; U6 snRNA-associated Sm-like protein LSm3	K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 
E        104506367 LSM4; U6 snRNA-associated Sm-like protein LSm4	K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 
E        104503250 LSM5; U6 snRNA-associated Sm-like protein LSm5	K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 
E        104505319 LSM6; U6 snRNA-associated Sm-like protein LSm6	K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 
E        104516118 LSM7; U6 snRNA-associated Sm-like protein LSm7	K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 
E        104505199 LSM8; LSM8 homolog, U6 small nuclear RNA associated	K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 
D      5' exonucleases
E        104505815 XRN1; 5'-3' exoribonuclease 1	K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
E        104510050 XRN2; 5'-3' exoribonuclease 2	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
D      Other 5'-3' decay factors
E        104516455 DCPS; m7GpppX diphosphatase	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
E        104515581 HELZ; probable helicase with zinc finger domain	K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] 
C    3'-5' decay
D      Core exosome factors
E        104503178 EXOSC2; exosome complex component RRP4	K03679 RRP4; exosome complex component RRP4 
E        104517184 EXOSC7; exosome complex component RRP42	K12589 RRP42; exosome complex component RRP42 
E        104511113 EXOSC8; exosome complex component RRP43	K12586 RRP43; exosome complex component RRP43 
E        104502974 EXOSC9; exosome complex component RRP45	K03678 RRP45; exosome complex component RRP45 
D      Exosome cofactors
E        104514892 DIS3; exosome complex exonuclease RRP44	K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] 
E        104507419 DIS3L; DIS3-like exonuclease 1	K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-] 
E        104512392 EXOSC10; exosome component 10	K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] 
E        104503124 C1D; nuclear nucleic acid-binding protein C1D	K12592 C1D; exosome complex protein LRP1 
E        104513555 MPHOSPH6; M-phase phosphoprotein 6	K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type 
E        104507692 LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX60	K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7] 
D      TRAMP complex
E        104510993 PAPD7; non-canonical poly(A) RNA polymerase PAPD7 isoform X1	K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] 
E        104516820 PAPD5; non-canonical poly(A) RNA polymerase PAPD5	K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] 
D      Ski complex
E        104512548 TTC37; tetratricopeptide repeat protein 37	K12600 SKI3; superkiller protein 3 
E        104515831 WDR61; WD repeat-containing protein 61	K12602 WDR61; WD repeat-containing protein 61 
D      Ccr4-NOT complex
E        104503809 CNOT6; CCR4-NOT transcription complex subunit 6	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        104503143 CNOT6L; CCR4-NOT transcription complex subunit 6-like isoform X1	K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] 
E        104505678 LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1-like	K12604 CNOT1; CCR4-NOT transcription complex subunit 1 
E        104515457 CNOT2; CCR4-NOT transcription complex subunit 2	K12605 CNOT2; CCR4-NOT transcription complex subunit 2 
E        104506199 CNOT4; CCR4-NOT transcription complex subunit 4 isoform X1	K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] 
E        104514466 CNOT7; CCR4-NOT transcription complex subunit 7	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        104511482 CNOT8; CCR4-NOT transcription complex subunit 8 isoform X1	K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 
E        104509631 RQCD1; cell differentiation protein RCD1 homolog	K12606 RCD1; CCR4-NOT transcription complex subunit 9 
E        104502530 CNOT10; CCR4-NOT transcription complex subunit 10	K12607 CNOT10; CCR4-NOT transcription complex subunit 10 
D      Pan complex
E        104510512 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit PAN2	K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] 
D      Other 3'-5' decay factors
E        104503037 PNLDC1; poly(A)-specific ribonuclease PARN-like domain-containing protein 1	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        104510140 PARN; poly(A)-specific ribonuclease PARN	K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] 
E        104513012 DHX36; ATP-dependent RNA helicase DHX36	K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] 
E        104512517 TOB1; protein Tob1	K14443 TOB; protein Tob/BTG 
E        104512826 BTG4; protein BTG4	K14443 TOB; protein Tob/BTG 
E        104502851 BTG1; protein BTG1	K14443 TOB; protein Tob/BTG 
E        104508676 BTG2; protein BTG2	K14443 TOB; protein Tob/BTG 
E        104502861 protein BTG1-like	K14443 TOB; protein Tob/BTG 
E        104516815 TOB2; protein Tob2	K14443 TOB; protein Tob/BTG 
E        104509053 CCRN4L; nocturnin	K18764 NOCT; nocturnin [EC:3.1.3.108] 
E        104511740 ERI1; 3'-5' exoribonuclease 1	K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-] 
E        104509182 ERI2; ERI1 exoribonuclease 2	K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-] 
E        104516455 DCPS; m7GpppX diphosphatase	K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] 
E        104503466 PDE12; 2',5'-phosphodiesterase 12	K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] 
E        104517206 IREB2; iron-responsive element-binding protein 2	K22416 IREB2; iron-responsive element-binding protein 2 
E        104515581 HELZ; probable helicase with zinc finger domain	K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-] 
E        104507684 HELZ2; helicase with zinc finger domain 2	K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6] 
E        104510566 protein NRDE2 homolog	K26109 NRDE2; nuclear exosome regulator NRDE2 
E        104512732 SAMD4A; protein Smaug homolog 1	K27396 SMG; protein Smaug 
C    Other degradation factors
D      RNases
E        104507009 ribonuclease ZC3H12A-like	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
E        104505065 ZC3H12C; probable ribonuclease ZC3H12C	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
E        104514986 ZC3H12B; probable ribonuclease ZC3H12B	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
E        104505974 ZC3H12D; probable ribonuclease ZC3H12D	K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] 
#
A<b>Prokaryotic type</b>
B  Bacterial mRNA degradation factors
C    RNA degradosome components
D      Ribonucreases
E        104507213 DROSHA; ribonuclease 3	K03685 rnc; ribonuclease III [EC:3.1.26.3] 
E        104507083 REXO2; oligoribonuclease, mitochondrial	K13288 orn; oligoribonuclease [EC:3.1.-.-] 
D      Helicases
D      Other RNA degradosome components
E        104504150 ENO1; alpha-enolase isoform X1	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        104516419 gamma-enolase isoform X1	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] 
E        104503147 PNPT1; polyribonucleotide nucleotidyltransferase 1, mitochondrial	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 
E        104517395 ATP-dependent 6-phosphofructokinase, liver type	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
E        104506621 PFKP; LOW QUALITY PROTEIN: ATP-dependent 6-phosphofructokinase, platelet type	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] 
C    Other RNA degradation factors
D      Chaperones
E        104512137 HSPA9; stress-70 protein, mitochondrial	K04043 dnaK; molecular chaperone DnaK 
E        104503627 HSPD1; 60 kDa heat shock protein, mitochondrial	K04077 groEL; chaperonin GroEL [EC:5.6.1.7] 
D      Others
D      Bacterial Small RNA Regulators
B  Archeal mRNA degradation factors
C    Exosome components
D      Core exosome
E        104503178 EXOSC2; exosome complex component RRP4	K03679 RRP4; exosome complex component RRP4 
D      Cofactors
E        104517184 EXOSC7; exosome complex component RRP42	K12589 RRP42; exosome complex component RRP42 
D      Others
!
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#Last updated: April 25, 2024