+D GENES KO
#
KEGG Orthology (KO) - Facklamia hominis
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:fhm00010]
D R0V13_05275 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D R0V13_04235 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D R0V13_02325 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D R0V13_02315 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D R0V13_02320 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D R0V13_01875 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D R0V13_04435 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D R0V13_02330 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D R0V13_09910 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D R0V13_06600 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D R0V13_06595 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D R0V13_06590 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D R0V13_06585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R0V13_06960 aldose epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D R0V13_10075 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:fhm00020]
D R0V13_06585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R0V13_09185 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D R0V13_06600 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D R0V13_06595 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D R0V13_06590 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:fhm00030]
D R0V13_03990 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D R0V13_02820 lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D R0V13_04070 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D R0V13_05440 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D R0V13_09490 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D R0V13_03730 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D R0V13_05035 PfkB family carbohydrate kinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D R0V13_05250 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D R0V13_10075 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D R0V13_01140 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D R0V13_04235 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D R0V13_05275 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:fhm00040]
D R0V13_05045 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D R0V13_04960 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D R0V13_04965 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D R0V13_05440 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:fhm00051]
D R0V13_05275 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D R0V13_04235 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D R0V13_02325 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:fhm00052]
D R0V13_06960 aldose epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D R0V13_06955 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D R0V13_06950 galT; UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D R0V13_01955 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D R0V13_04960 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D R0V13_04965 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D R0V13_10075 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D R0V13_08605 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D R0V13_05275 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism [PATH:fhm00053]
D R0V13_05045 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D R0V13_03570 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D R0V13_03565 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D R0V13_03560 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
C 00500 Starch and sucrose metabolism [PATH:fhm00500]
D R0V13_04960 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D R0V13_04965 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D R0V13_10125 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D R0V13_10130 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D R0V13_02615 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D R0V13_02620 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D R0V13_02625 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D R0V13_02610 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D R0V13_06105 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D R0V13_10075 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:fhm00520]
D R0V13_00355 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D R0V13_06970 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D R0V13_00335 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D R0V13_01135 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D R0V13_00995 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D R0V13_05990 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D R0V13_09525 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D R0V13_01985 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D R0V13_10075 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D R0V13_04960 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D R0V13_04965 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D R0V13_05045 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D R0V13_06955 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D R0V13_06950 galT; UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D R0V13_01955 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D R0V13_02615 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D R0V13_02620 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:fhm00620]
D R0V13_06600 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D R0V13_06595 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D R0V13_06590 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D R0V13_06585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R0V13_05790 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D R0V13_09550 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D R0V13_02600 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D R0V13_00400 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D R0V13_07245 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D R0V13_09185 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D R0V13_09910 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D R0V13_00070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:fhm00630]
D R0V13_00070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R0V13_07270 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D R0V13_00090 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R0V13_06015 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D R0V13_02030 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D R0V13_02035 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D R0V13_02020 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D R0V13_06585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R0V13_02025 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00640 Propanoate metabolism [PATH:fhm00640]
D R0V13_05790 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D R0V13_09550 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D R0V13_06585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00650 Butanoate metabolism [PATH:fhm00650]
D R0V13_00070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R0V13_06000 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D R0V13_02075 2,3-butanediol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism
D R0V13_09220 RraA family protein K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
C 00562 Inositol phosphate metabolism [PATH:fhm00562]
D R0V13_06575 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D R0V13_02325 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:fhm00190]
D R0V13_04990 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D R0V13_04995 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D R0V13_05005 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D R0V13_04970 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D R0V13_04980 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D R0V13_04975 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D R0V13_09665 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D R0V13_09660 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D R0V13_09675 V-type ATPase subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D R0V13_09655 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D R0V13_09680 hypothetical protein K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D R0V13_09670 V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D R0V13_09695 V-type ATPase 116kDa subunit family protein K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D R0V13_09685 V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D R0V13_04555 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:fhm00680]
D R0V13_06015 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D R0V13_02330 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D R0V13_04235 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D R0V13_05275 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D R0V13_05790 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D R0V13_09550 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D R0V13_01875 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D R0V13_04435 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D R0V13_02470 corrinoid protein K16179 mtbC; dimethylamine corrinoid protein
C 00910 Nitrogen metabolism [PATH:fhm00910]
D R0V13_08515 ABC transporter ATP-binding protein K15579 nrtD; nitrate/nitrite transport system ATP-binding protein
D R0V13_06850 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D R0V13_00090 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R0V13_03790 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D R0V13_08205 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D R0V13_09225 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:fhm00920]
D R0V13_08170 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D R0V13_08520 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D R0V13_08165 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein
D R0V13_08330 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D R0V13_08510 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein
D R0V13_08160 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D R0V13_08335 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D R0V13_07000 NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D R0V13_03980 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D R0V13_07905 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D R0V13_08315 epsC; serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D R0V13_08345 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D R0V13_08545 cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis
D R0V13_05405 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:fhm00071]
D R0V13_00070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R0V13_08320 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D R0V13_08525 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:fhm00561]
D R0V13_05410 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D R0V13_04525 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D R0V13_03950 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D R0V13_02245 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00564 Glycerophospholipid metabolism [PATH:fhm00564]
D R0V13_10085 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D R0V13_04525 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D R0V13_03950 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D R0V13_06520 alpha/beta fold hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D R0V13_04315 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D R0V13_06505 hypothetical protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D R0V13_05345 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D R0V13_01090 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
D R0V13_08605 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:fhm00230]
D R0V13_05880 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D R0V13_05250 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D R0V13_10075 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D R0V13_01140 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D R0V13_07365 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D R0V13_07375 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D R0V13_07345 phosphoribosylformylglycinamidine synthase subunit PurQ K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D R0V13_07380 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D R0V13_01820 ATP-grasp domain-containing protein K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D R0V13_07355 purK; 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D R0V13_07360 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D R0V13_07350 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D R0V13_08120 lyase family protein K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D R0V13_07370 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D R0V13_03925 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D R0V13_01735 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D R0V13_04460 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D R0V13_01055 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D R0V13_09960 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D R0V13_07845 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D R0V13_02885 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D R0V13_05810 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D R0V13_09445 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D R0V13_05485 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D R0V13_01005 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D R0V13_09575 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D R0V13_02195 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D R0V13_01680 bifunctional UDP-sugar hydrolase/5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D R0V13_09625 metallophosphoesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D R0V13_09795 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D R0V13_09215 allD; ureidoglycolate dehydrogenase K00073 allD; ureidoglycolate dehydrogenase (NAD+) [EC:1.1.1.350]
D R0V13_03790 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D R0V13_08205 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D R0V13_09225 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:fhm00240]
D R0V13_00600 dihydroorotate oxidase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D R0V13_09270 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D R0V13_09275 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D R0V13_04300 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D R0V13_02775 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D R0V13_05210 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D R0V13_05720 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D R0V13_01735 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D R0V13_06010 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D R0V13_05785 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D R0V13_01680 bifunctional UDP-sugar hydrolase/5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D R0V13_09625 metallophosphoesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D R0V13_06085 pseudouridine-5'-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D R0V13_09485 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D R0V13_02595 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D R0V13_02795 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D R0V13_07395 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D R0V13_01005 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D R0V13_08875 ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D R0V13_00105 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D R0V13_06035 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D R0V13_05050 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D R0V13_07995 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:fhm00250]
D R0V13_05575 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D R0V13_04935 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D R0V13_05590 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D R0V13_02860 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D R0V13_08120 lyase family protein K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D R0V13_06850 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D R0V13_00090 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R0V13_06970 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
C 00260 Glycine, serine and threonine metabolism [PATH:fhm00260]
D R0V13_06015 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D R0V13_01875 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D R0V13_04435 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D R0V13_06075 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D R0V13_02030 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D R0V13_02035 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D R0V13_02020 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D R0V13_06585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R0V13_02025 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D R0V13_06505 hypothetical protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D R0V13_07465 aldehyde dehydrogenase family protein K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D R0V13_07050 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00270 Cysteine and methionine metabolism [PATH:fhm00270]
D R0V13_08315 epsC; serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D R0V13_08345 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D R0V13_08545 cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D R0V13_08540 PLP-dependent aspartate aminotransferase family protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D R0V13_06300 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D R0V13_06315 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D R0V13_05865 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D R0V13_01055 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D R0V13_09370 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D R0V13_06530 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D R0V13_01560 gshAB; bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D R0V13_07905 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D R0V13_07050 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00280 Valine, leucine and isoleucine degradation [PATH:fhm00280]
D R0V13_06585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R0V13_08320 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D R0V13_08525 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D R0V13_00070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R0V13_06000 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis
C 00300 Lysine biosynthesis [PATH:fhm00300]
D R0V13_00260 ArgE/DapE family deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D R0V13_04910 M20/M25/M40 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D R0V13_00910 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00841 patA; aminotransferase [EC:2.6.1.-]
D R0V13_05955 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
C 00310 Lysine degradation [PATH:fhm00310]
D R0V13_06585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R0V13_00070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:fhm00220]
D R0V13_03775 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D R0V13_08220 hypothetical protein K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D R0V13_03770 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D R0V13_00090 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R0V13_03790 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D R0V13_08205 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D R0V13_09225 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D R0V13_06850 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
C 00330 Arginine and proline metabolism [PATH:fhm00330]
D R0V13_02795 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D R0V13_07395 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D R0V13_08215 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D R0V13_02785 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D R0V13_08620 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D R0V13_09230 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D R0V13_04835 alpha/beta fold hydrolase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D R0V13_03030 glycine/sarcosine/betaine reductase selenoprotein B family protein K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1]
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
C 00360 Phenylalanine metabolism
D R0V13_02785 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D R0V13_08620 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D R0V13_09230 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:fhm00380]
D R0V13_06585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R0V13_00070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R0V13_02785 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D R0V13_08620 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D R0V13_09230 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:fhm00400]
D R0V13_03370 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D R0V13_03375 hypothetical protein K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D R0V13_06775 chorismate mutase K04516 AROA1; chorismate mutase [EC:5.4.99.5]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D R0V13_07995 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
C 00430 Taurine and hypotaurine metabolism [PATH:fhm00430]
D R0V13_02860 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D R0V13_09550 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D R0V13_05790 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:fhm00450]
D R0V13_08540 PLP-dependent aspartate aminotransferase family protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D R0V13_06300 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D R0V13_00815 SufS family cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D R0V13_10080 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D R0V13_03110 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D R0V13_03125 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D R0V13_10015 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:fhm00460]
D R0V13_04935 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D R0V13_06015 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:fhm00470]
D R0V13_00395 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D R0V13_02880 racE; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D R0V13_05945 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D R0V13_05575 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D R0V13_03030 glycine/sarcosine/betaine reductase selenoprotein B family protein K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1]
C 00480 Glutathione metabolism [PATH:fhm00480]
D R0V13_01560 gshAB; bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D R0V13_04070 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D R0V13_03990 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:fhm00511]
D R0V13_08605 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:fhm00542]
D R0V13_01160 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:fhm00541]
D R0V13_04960 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D R0V13_04965 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D R0V13_01955 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D R0V13_05045 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D R0V13_01135 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D R0V13_04635 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D R0V13_01985 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
C 00550 Peptidoglycan biosynthesis [PATH:fhm00550]
D R0V13_00995 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D R0V13_05990 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D R0V13_09525 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D R0V13_05945 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D R0V13_05955 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D R0V13_03880 diacylglycerol kinase family protein K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D R0V13_04310 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D R0V13_06925 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D R0V13_05950 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D R0V13_05155 penicillin-binding transpeptidase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D R0V13_02630 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D R0V13_05960 penicillin-binding protein 2 K08724 pbpB; penicillin-binding protein 2B
D R0V13_04015 penicillin-binding protein 2 K21465 pbpA; penicillin-binding protein A
D R0V13_02145 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D R0V13_10240 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D R0V13_01990 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D R0V13_06040 Mur ligase family protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D R0V13_03600 transglycosylase domain-containing protein K03693 pbp1b; penicillin-binding protein 1B
C 00552 Teichoic acid biosynthesis [PATH:fhm00552]
D R0V13_06925 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D R0V13_01160 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D R0V13_04955 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D R0V13_02245 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D R0V13_01860 glycosyltransferase family 4 protein K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D R0V13_04635 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:fhm00543]
D R0V13_01160 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D R0V13_08315 epsC; serine O-acetyltransferase EpsC K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:fhm00730]
D R0V13_04160 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D R0V13_05770 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D R0V13_05445 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D R0V13_03070 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D R0V13_05435 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D R0V13_09795 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:fhm00740]
D R0V13_04250 Cof-type HAD-IIB family hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D R0V13_04370 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D R0V13_07000 NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D R0V13_05880 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:fhm00750]
D R0V13_06625 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
C 00760 Nicotinate and nicotinamide metabolism [PATH:fhm00760]
D R0V13_02745 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D R0V13_01150 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D R0V13_04460 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D R0V13_01735 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D R0V13_02275 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D R0V13_04175 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D R0V13_02200 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D R0V13_08000 isochorismatase family protein K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107]
C 00770 Pantothenate and CoA biosynthesis [PATH:fhm00770]
D R0V13_09450 coaA; type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D R0V13_01535 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D R0V13_06545 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D R0V13_02105 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D R0V13_00390 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D R0V13_03390 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D R0V13_07995 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
C 00780 Biotin metabolism [PATH:fhm00780]
D R0V13_00310 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:fhm00785]
D R0V13_00265 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D R0V13_06935 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D R0V13_08095 biotin/lipoate A/B protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D R0V13_00960 hypothetical protein K18821 lipL; lipoyl amidotransferase [EC:2.3.1.200]
D R0V13_06585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R0V13_06600 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D R0V13_06595 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D R0V13_06590 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D R0V13_02030 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D R0V13_02035 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D R0V13_02020 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D R0V13_02025 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:fhm00790]
D R0V13_05535 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D R0V13_03070 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D R0V13_05525 NUDIX domain-containing protein K19965 folQ; dihydroneopterin triphosphate pyrophosphohydrolase [EC:3.6.1.67]
D R0V13_05545 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D R0V13_05540 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D R0V13_05550 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D R0V13_04450 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D R0V13_04185 folylpolyglutamate synthase/dihydrofolate synthase family protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D R0V13_05530 Mur ligase family protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
C 00670 One carbon pool by folate [PATH:fhm00670]
D R0V13_04450 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D R0V13_02005 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D R0V13_02010 tetrahydrofolate dehydrogenase/cyclohydrolase catalytic domain-containing protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D R0V13_02015 cyclodeaminase/cyclohydrolase family protein K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D R0V13_06015 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D R0V13_07375 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D R0V13_07370 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D R0V13_02020 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D R0V13_05050 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D R0V13_04410 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:fhm00860]
D R0V13_02490 uroporphyrinogen decarboxylase family protein K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D R0V13_02495 uroporphyrinogen decarboxylase family protein K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D R0V13_03535 uroporphyrinogen decarboxylase family protein K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:fhm00900]
D R0V13_00070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R0V13_06000 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D R0V13_06005 hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D R0V13_09455 mvk; mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D R0V13_09460 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D R0V13_09480 fni; type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D R0V13_06660 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D R0V13_04310 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures [PATH:fhm01054]
D R0V13_05575 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:fhm01053]
D R0V13_03420 amino acid adenylation domain-containing protein K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69]
D R0V13_03400 AMP-binding protein K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-]
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D R0V13_07820 linear amide C-N hydrolase K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:fhm00521]
D R0V13_10075 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D R0V13_06575 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D R0V13_05405 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D R0V13_06315 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:fhm00362]
D R0V13_09220 RraA family protein K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D R0V13_00070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D R0V13_02785 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D R0V13_08620 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D R0V13_09230 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:fhm00643]
D R0V13_02785 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D R0V13_08620 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D R0V13_09230 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:fhm03020]
D R0V13_10175 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D R0V13_10170 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D R0V13_09770 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D R0V13_05480 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D R0V13_00980 rpoE; DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:fhm03010]
D R0V13_05205 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D R0V13_04290 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D R0V13_09870 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D R0V13_04140 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D R0V13_09815 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D R0V13_00035 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D R0V13_09940 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D R0V13_09830 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D R0V13_00580 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D R0V13_09905 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D R0V13_09775 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D R0V13_09945 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D R0V13_09780 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D R0V13_09835 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D R0V13_05515 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D R0V13_04120 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D R0V13_09855 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D R0V13_00045 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D R0V13_09880 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D R0V13_05560 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D R0V13_03855 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D R0V13_10215 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D R0V13_09885 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D R0V13_09900 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D R0V13_09840 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D R0V13_09825 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D R0V13_10205 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D R0V13_00055 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D R0V13_10210 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D R0V13_10220 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D R0V13_00575 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D R0V13_09850 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D R0V13_09805 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D R0V13_09865 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D R0V13_09765 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D R0V13_09820 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D R0V13_04230 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D R0V13_02185 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D R0V13_04215 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D R0V13_09875 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D R0V13_09890 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D R0V13_09845 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D R0V13_06830 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D R0V13_04225 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D R0V13_05430 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D R0V13_09860 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D R0V13_09810 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D R0V13_01045 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D R0V13_02305 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D R0V13_04030 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D R0V13_10235 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D R0V13_10310 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D R0V13_02180 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D R0V13_09785 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:fhm00970]
D R0V13_06345 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D R0V13_00120 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D R0V13_01845 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D R0V13_01850 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D R0V13_01840 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D R0V13_05745 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D R0V13_07925 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D R0V13_03765 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D R0V13_05165 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D R0V13_03895 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D R0V13_03900 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D R0V13_02135 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D R0V13_06815 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D R0V13_03125 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D R0V13_00270 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D R0V13_10015 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D R0V13_04180 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D R0V13_06280 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D R0V13_09950 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D R0V13_03810 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D R0V13_00510 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D R0V13_03160 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D R0V13_03165 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D R0V13_02045 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:fhm03060]
D R0V13_09800 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D R0V13_10230 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D R0V13_06765 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D R0V13_03965 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D R0V13_04085 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D R0V13_10300 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D R0V13_01195 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D R0V13_04115 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D R0V13_05355 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D R0V13_07715 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D R0V13_00505 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D R0V13_04790 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:fhm04122]
D R0V13_04160 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D R0V13_05770 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D R0V13_07905 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D R0V13_05760 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D R0V13_02935 rhodanese-like domain-containing protein K21028 ynjE; molybdopterin synthase sulfurtransferase [EC:2.8.1.11]
D R0V13_06295 rhodanese-like domain-containing protein K21028 ynjE; molybdopterin synthase sulfurtransferase [EC:2.8.1.11]
D R0V13_08385 rhodanese-like domain-containing protein K21028 ynjE; molybdopterin synthase sulfurtransferase [EC:2.8.1.11]
C 03050 Proteasome
C 03018 RNA degradation [PATH:fhm03018]
D R0V13_02330 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D R0V13_06755 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D R0V13_00385 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D R0V13_01870 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D R0V13_01000 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D R0V13_05330 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D R0V13_05505 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D R0V13_05275 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D R0V13_04385 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D R0V13_00555 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:fhm03030]
D R0V13_05280 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D R0V13_00830 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D R0V13_00855 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D R0V13_05565 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D R0V13_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D R0V13_00060 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D R0V13_05125 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D R0V13_00040 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R0V13_10055 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R0V13_03690 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D R0V13_02835 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D R0V13_01830 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:fhm03410]
D R0V13_04805 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D R0V13_04415 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D R0V13_07020 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D R0V13_02100 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D R0V13_00880 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D R0V13_01830 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:fhm03420]
D R0V13_09985 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D R0V13_10110 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D R0V13_05555 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D R0V13_01830 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:fhm03430]
D R0V13_05320 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D R0V13_02850 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D R0V13_05310 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D R0V13_06670 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D R0V13_06665 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D R0V13_00040 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R0V13_10055 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R0V13_05280 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D R0V13_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D R0V13_00830 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D R0V13_05565 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D R0V13_00855 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D R0V13_01830 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:fhm03440]
D R0V13_00040 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R0V13_10055 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R0V13_00020 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D R0V13_03890 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D R0V13_05300 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D R0V13_05295 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D R0V13_04755 helix-turn-helix domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D R0V13_05415 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D R0V13_05755 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D R0V13_05280 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D R0V13_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D R0V13_00830 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D R0V13_05565 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D R0V13_00855 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D R0V13_05475 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:fhm02010]
D R0V13_08515 ABC transporter ATP-binding protein K15579 nrtD; nitrate/nitrite transport system ATP-binding protein
D R0V13_08170 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D R0V13_08520 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D R0V13_08165 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein
D R0V13_08330 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D R0V13_08510 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein
D R0V13_08160 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D R0V13_08335 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D R0V13_01740 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D R0V13_06250 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D R0V13_01745 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D R0V13_06260 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D R0V13_01750 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D R0V13_06255 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D R0V13_09510 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D R0V13_09515 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D R0V13_02955 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D R0V13_09520 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D R0V13_06140 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R0V13_08575 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R0V13_08595 extracellular solute-binding protein K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D R0V13_08590 sugar ABC transporter permease K10189 lacF; lactose/L-arabinose transport system permease protein
D R0V13_08585 carbohydrate ABC transporter permease K10190 lacG; lactose/L-arabinose transport system permease protein
D R0V13_06215 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D R0V13_06090 BMP family protein K07335 bmpA; basic membrane protein A and related proteins
D R0V13_04100 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D R0V13_04095 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D R0V13_02515 galactose ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D R0V13_02505 beta-methylgalactoside transporter K10541 mglC; methyl-galactoside transport system permease protein
D R0V13_02510 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D R0V13_01525 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D R0V13_01230 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D R0V13_01235 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D R0V13_01240 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D R0V13_05640 PhnD/SsuA/transferrin family substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D R0V13_09605 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D R0V13_05655 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D R0V13_09620 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D R0V13_05645 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D R0V13_09610 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D R0V13_08140 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D R0V13_08135 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D R0V13_08130 ATP-binding cassette domain-containing protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D R0V13_08430 transporter substrate-binding domain-containing protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D R0V13_08495 transporter substrate-binding domain-containing protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D R0V13_08425 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D R0V13_08420 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D R0V13_09710 ABC transporter permease subunit K17073 lysX1; putative lysine transport system substrate-binding protein
D R0V13_09705 amino acid ABC transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D R0V13_09735 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R0V13_09730 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R0V13_09725 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D R0V13_09720 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R0V13_00925 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D R0V13_05015 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D R0V13_05030 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D R0V13_07150 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D R0V13_07585 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D R0V13_08380 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D R0V13_00920 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D R0V13_07145 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D R0V13_07590 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D R0V13_08375 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D R0V13_00915 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D R0V13_07140 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D R0V13_07595 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D R0V13_08370 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D R0V13_02550 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D R0V13_02695 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D R0V13_03800 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D R0V13_02555 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D R0V13_02700 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D R0V13_02560 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D R0V13_02705 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D R0V13_02565 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D R0V13_06795 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D R0V13_08460 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D R0V13_02570 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D R0V13_03595 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D R0V13_06790 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D R0V13_08455 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D R0V13_01125 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D R0V13_01120 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D R0V13_07900 zinc ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D R0V13_07890 metal ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein
D R0V13_07885 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein
D R0V13_07895 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D R0V13_04860 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D R0V13_03440 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D R0V13_09750 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D R0V13_09760 energy-coupling factor ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D R0V13_09755 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D R0V13_07440 ABC transporter permease K20461 nukG; lantibiotic transport system permease protein
D R0V13_07430 ATP-binding cassette domain-containing protein K20459 nukF; lantibiotic transport system ATP-binding protein
D R0V13_09285 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein
D R0V13_09290 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein
D R0V13_09280 lantibiotic protection ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D R0V13_07505 ABC transporter permease K19084 braE; bacitracin transport system permease protein
D R0V13_01210 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D R0V13_01205 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D R0V13_03455 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D R0V13_07800 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D R0V13_03460 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D R0V13_07795 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D R0V13_09035 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D R0V13_03940 ABC transporter transmembrane domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D R0V13_03945 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D R0V13_01050 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D R0V13_03815 ABC transporter ATP-binding protein K18216 steA; ATP-binding cassette, subfamily B, tetracycline resistant protein
D R0V13_03820 ABC transporter ATP-binding protein K18217 steB; ATP-binding cassette, subfamily B, tetracycline resistant protein
D R0V13_05825 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D R0V13_07010 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D R0V13_07005 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D R0V13_08755 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D R0V13_08685 peptide cleavage/export ABC transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D R0V13_02765 ATP-binding cassette domain-containing protein K18231 msr; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:fhm02060]
D R0V13_02235 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D R0V13_02230 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D R0V13_10125 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D R0V13_10130 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D R0V13_03570 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D R0V13_03565 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D R0V13_03560 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
C 03070 Bacterial secretion system [PATH:fhm03070]
D R0V13_10230 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D R0V13_06765 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D R0V13_09800 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D R0V13_03965 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D R0V13_04085 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D R0V13_10300 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D R0V13_01195 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D R0V13_05355 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D R0V13_04115 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D R0V13_03250 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:fhm02020]
D R0V13_01220 histidine kinase dimerization/phospho-acceptor domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D R0V13_01215 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D R0V13_03070 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D R0V13_01525 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D R0V13_00425 histidine kinase dimerization/phospho-acceptor domain-containing protein K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D R0V13_00420 yycF; response regulator YycF K07668 vicR; two-component system, OmpR family, response regulator VicR
D R0V13_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D R0V13_07505 ABC transporter permease K19084 braE; bacitracin transport system permease protein
D R0V13_07515 hypothetical protein K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D R0V13_01990 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D R0V13_04080 ATP-binding protein K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D R0V13_04075 response regulator transcription factor K18941 arlR; two-component system, OmpR family, response regulator ArlR
D R0V13_09300 HAMP domain-containing sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D R0V13_09295 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D R0V13_09280 lantibiotic protection ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D R0V13_09285 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein
D R0V13_09290 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein
D R0V13_08690 GHKL domain-containing protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D R0V13_08695 LytTR family DNA-binding domain-containing protein K07707 agrA; two-component system, LytTR family, response regulator AgrA
D R0V13_04880 serine hydrolase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D R0V13_05705 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D R0V13_05700 response regulator transcription factor K11618 liaR; two-component system, NarL family, response regulator LiaR
D R0V13_05710 liaF; cell wall-active antibiotics response protein LiaF K11622 liaF; lia operon protein LiaF
D R0V13_08785 response regulator transcription factor K14989 salR; two-component system, NarL family, secretion system response regulator SalR
D R0V13_00090 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R0V13_00070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R0V13_01095 RNA polymerase subunit sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D R0V13_08255 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:fhm02024]
D R0V13_06530 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D R0V13_05070 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D R0V13_02950 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D R0V13_05080 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D R0V13_02945 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D R0V13_05085 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D R0V13_09735 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R0V13_09730 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R0V13_09725 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D R0V13_09720 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R0V13_08255 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D R0V13_08690 GHKL domain-containing protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D R0V13_08695 LytTR family DNA-binding domain-containing protein K07707 agrA; two-component system, LytTR family, response regulator AgrA
D R0V13_02550 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D R0V13_02695 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D R0V13_03800 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D R0V13_02555 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D R0V13_02700 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D R0V13_02560 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D R0V13_02705 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D R0V13_02565 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D R0V13_06795 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D R0V13_08460 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D R0V13_02570 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D R0V13_03595 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D R0V13_06790 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D R0V13_08455 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D R0V13_09650 helix-turn-helix transcriptional regulator K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D R0V13_08685 peptide cleavage/export ABC transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D R0V13_03575 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R0V13_05380 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R0V13_06810 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R0V13_08475 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R0V13_03580 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D R0V13_05390 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D R0V13_08470 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D R0V13_03585 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R0V13_05385 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R0V13_06800 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R0V13_08465 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R0V13_03590 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D R0V13_05400 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D R0V13_05395 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D R0V13_04085 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D R0V13_10300 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D R0V13_10230 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D R0V13_06765 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D R0V13_09800 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D R0V13_03965 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D R0V13_01195 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D R0V13_05355 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D R0V13_04115 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D R0V13_09300 HAMP domain-containing sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D R0V13_09295 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D R0V13_09280 lantibiotic protection ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D R0V13_09285 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein
D R0V13_09290 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D R0V13_02515 galactose ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:fhm02040]
D R0V13_08140 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D R0V13_05120 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D R0V13_01095 RNA polymerase subunit sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D R0V13_02330 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:fhm01501]
D R0V13_04880 serine hydrolase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D R0V13_02550 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D R0V13_02695 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D R0V13_03800 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D R0V13_02555 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D R0V13_02700 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D R0V13_02560 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D R0V13_02705 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D R0V13_02565 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D R0V13_06795 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D R0V13_08460 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D R0V13_02570 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D R0V13_03595 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D R0V13_06790 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D R0V13_08455 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D R0V13_01050 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D R0V13_05155 penicillin-binding transpeptidase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D R0V13_03600 transglycosylase domain-containing protein K03693 pbp1b; penicillin-binding protein 1B
D R0V13_02630 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:fhm01502]
D R0V13_00395 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D R0V13_05950 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D R0V13_01990 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:fhm01503]
D R0V13_03750 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:fhm01000]
C 01001 Protein kinases [BR:fhm01001]
D R0V13_05450 PASTA domain-containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D R0V13_00945 CpsD/CapB family tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D R0V13_01220 histidine kinase dimerization/phospho-acceptor domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D R0V13_00425 histidine kinase dimerization/phospho-acceptor domain-containing protein K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D R0V13_07515 hypothetical protein K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D R0V13_04080 ATP-binding protein K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D R0V13_09300 HAMP domain-containing sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D R0V13_05705 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D R0V13_08690 GHKL domain-containing protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:fhm01009]
D R0V13_05275 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D R0V13_05460 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:fhm01002]
D R0V13_04790 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D R0V13_10165 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D R0V13_02365 C1 family peptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D R0V13_09445 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D R0V13_08685 peptide cleavage/export ABC transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D R0V13_10025 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D R0V13_06970 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D R0V13_05590 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D R0V13_07820 linear amide C-N hydrolase K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D R0V13_00500 class A sortase K07284 srtA; sortase A [EC:3.4.22.70]
D R0V13_00485 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D R0V13_03795 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D R0V13_04440 type II CAAX endopeptidase family protein K07052 K07052; CAAX protease family protein
D R0V13_08075 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D R0V13_04210 M13-type metalloendopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D R0V13_01990 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D R0V13_05620 insulinase family protein K06972 PITRM1; presequence protease [EC:3.4.24.-]
D R0V13_00260 ArgE/DapE family deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D R0V13_04910 M20/M25/M40 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D R0V13_01700 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D R0V13_05105 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D R0V13_01930 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D R0V13_00315 Xaa-Pro peptidase family protein K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D R0V13_06700 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D R0V13_07965 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D R0V13_04325 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D R0V13_02070 P1 family peptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D R0V13_02145 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D R0V13_10240 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D R0V13_02310 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D R0V13_07095 CocE/NonD family hydrolase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D R0V13_07215 CocE/NonD family hydrolase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D R0V13_00505 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D R0V13_04835 alpha/beta fold hydrolase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D R0V13_04470 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D R0V13_03180 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D R0V13_04035 rhomboid family intramembrane serine protease K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
D R0V13_04500 hslV; HslU--HslV peptidase proteolytic subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D R0V13_06780 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:fhm01003]
D R0V13_02245 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D R0V13_01860 glycosyltransferase family 4 protein K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D R0V13_02625 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D R0V13_05155 penicillin-binding transpeptidase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D R0V13_03600 transglycosylase domain-containing protein K03693 pbp1b; penicillin-binding protein 1B
D R0V13_02630 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D R0V13_01160 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:fhm01005]
D R0V13_02090 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D R0V13_01160 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:fhm01011]
D R0V13_00995 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D R0V13_05990 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D R0V13_09525 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D R0V13_05945 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D R0V13_05955 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D R0V13_00395 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D R0V13_02880 racE; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D R0V13_05950 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D R0V13_06925 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D R0V13_05155 penicillin-binding transpeptidase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D R0V13_03600 transglycosylase domain-containing protein K03693 pbp1b; penicillin-binding protein 1B
D R0V13_02630 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D R0V13_05960 penicillin-binding protein 2 K08724 pbpB; penicillin-binding protein 2B
D R0V13_04015 penicillin-binding protein 2 K21465 pbpA; penicillin-binding protein A
D R0V13_02145 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D R0V13_10240 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D R0V13_01990 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D R0V13_10025 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D R0V13_00500 class A sortase K07284 srtA; sortase A [EC:3.4.22.70]
D R0V13_05725 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D R0V13_03750 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:fhm01004]
D R0V13_05410 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D R0V13_04525 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D R0V13_03950 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:fhm01008]
D R0V13_03400 AMP-binding protein K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-]
D R0V13_03420 amino acid adenylation domain-containing protein K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69]
D R0V13_05575 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:fhm01006]
D R0V13_06660 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D R0V13_04310 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D R0V13_06640 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:fhm01007]
D R0V13_00120 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D R0V13_02045 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D R0V13_00270 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D R0V13_03810 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D R0V13_10015 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D R0V13_04180 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D R0V13_06280 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D R0V13_09950 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D R0V13_03765 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D R0V13_05165 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D R0V13_03895 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D R0V13_03900 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D R0V13_06815 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D R0V13_00510 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D R0V13_02135 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D R0V13_05745 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D R0V13_07925 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D R0V13_03160 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D R0V13_03165 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D R0V13_00910 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00841 patA; aminotransferase [EC:2.6.1.-]
D R0V13_06075 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D R0V13_06300 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:fhm00194]
D R0V13_05005 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D R0V13_04995 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D R0V13_04990 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D R0V13_04980 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D R0V13_04975 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D R0V13_04970 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:fhm03000]
D R0V13_09370 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D R0V13_09915 helix-turn-helix transcriptional regulator K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D R0V13_02910 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D R0V13_07285 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D R0V13_00085 MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D R0V13_05680 merR; Hg(II)-responsive transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D R0V13_03850 Fur family transcriptional regulator K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D R0V13_02040 Fur family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D R0V13_08255 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D R0V13_03825 Crp/Fnr family transcriptional regulator K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator
D R0V13_07725 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D R0V13_00345 metalloregulator ArsR/SmtB family transcription factor K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D R0V13_09015 metalloregulator ArsR/SmtB family transcription factor K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D R0V13_07865 metalloregulator ArsR/SmtB family transcription factor K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D R0V13_03355 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D R0V13_05835 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D R0V13_00310 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D R0V13_09650 helix-turn-helix transcriptional regulator K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D R0V13_01130 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D R0V13_00545 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D R0V13_07125 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D R0V13_07495 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D R0V13_07610 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D R0V13_07705 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D R0V13_08835 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D R0V13_08985 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D R0V13_09340 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D R0V13_08230 helix-turn-helix domain-containing protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D R0V13_09255 PucR family transcriptional regulator ligand-binding domain-containing protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D R0V13_04375 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D R0V13_00680 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D R0V13_05785 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D R0V13_02110 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D R0V13_05975 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:fhm03021]
D R0V13_09770 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D R0V13_10175 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D R0V13_10170 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D R0V13_00980 rpoE; DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D R0V13_05480 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D R0V13_05120 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D R0V13_00290 sigma-70 family RNA polymerase sigma factor K27000 sigH; RNA polymerase sigma-H factor
D R0V13_01095 RNA polymerase subunit sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D R0V13_04340 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D R0V13_06690 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D R0V13_10225 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D R0V13_05715 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D R0V13_01000 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:fhm03019]
D R0V13_05375 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D R0V13_05505 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D R0V13_05330 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D R0V13_06755 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D R0V13_02645 HD domain-containing protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D R0V13_00385 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D R0V13_03995 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D R0V13_01870 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D R0V13_02330 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D R0V13_01000 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D R0V13_05275 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D R0V13_04385 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D R0V13_00555 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D R0V13_10070 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:fhm03011]
D R0V13_05205 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D R0V13_04290 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D R0V13_09870 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D R0V13_04140 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D R0V13_09815 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D R0V13_00035 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D R0V13_09940 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D R0V13_09830 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D R0V13_00580 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D R0V13_09905 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D R0V13_09775 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D R0V13_09945 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D R0V13_09780 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D R0V13_09835 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D R0V13_05515 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D R0V13_04120 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D R0V13_09855 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D R0V13_00045 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D R0V13_09880 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D R0V13_05560 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D R0V13_03855 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D R0V13_10215 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D R0V13_09885 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D R0V13_09900 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D R0V13_09840 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D R0V13_09825 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D R0V13_00055 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D R0V13_10210 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D R0V13_10220 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D R0V13_10205 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D R0V13_00575 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D R0V13_09850 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D R0V13_09805 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D R0V13_09865 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D R0V13_09765 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D R0V13_09820 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D R0V13_04230 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D R0V13_02185 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D R0V13_04215 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D R0V13_09875 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D R0V13_09890 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D R0V13_09845 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D R0V13_04225 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D R0V13_05430 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D R0V13_09860 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D R0V13_09810 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D R0V13_01045 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D R0V13_02305 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D R0V13_04030 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D R0V13_10235 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D R0V13_10310 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D R0V13_02180 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D R0V13_09785 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D R0V13_06830 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:fhm03009]
D R0V13_05375 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D R0V13_03885 era; GTPase Era K03595 era; GTPase
D R0V13_03905 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D R0V13_04340 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D R0V13_06690 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D R0V13_10225 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D R0V13_06265 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D R0V13_10000 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D R0V13_05465 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D R0V13_10180 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D R0V13_03720 RsmE family RNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D R0V13_10270 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D R0V13_05970 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D R0V13_00875 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D R0V13_06655 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D R0V13_00280 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D R0V13_00470 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D R0V13_01785 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D R0V13_00885 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D R0V13_07810 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D R0V13_09110 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D R0V13_05225 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D R0V13_02205 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D R0V13_04795 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D R0V13_08010 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D R0V13_00175 erm(B); 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D R0V13_00520 GNAT family N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D R0V13_00525 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D R0V13_04130 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D R0V13_03715 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D R0V13_05735 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D R0V13_00275 ribonuclease III domain-containing protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D R0V13_00385 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D R0V13_03995 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D R0V13_05445 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D R0V13_05200 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D R0V13_02265 yqeH; ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase
D R0V13_06020 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D R0V13_04360 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D R0V13_04335 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D R0V13_00015 yaaA; S4 domain-containing protein YaaA K14761 rlbA; ribosome-associated protein
D R0V13_02285 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D R0V13_03875 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D R0V13_02270 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D R0V13_01185 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D R0V13_10250 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D R0V13_02300 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:fhm03016]
D R0V13_03915 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D R0V13_05180 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D R0V13_00510 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D R0V13_06280 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D R0V13_10015 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D R0V13_03810 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D R0V13_09950 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D R0V13_03765 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D R0V13_05745 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D R0V13_07925 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D R0V13_05165 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D R0V13_02135 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D R0V13_06815 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D R0V13_00270 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D R0V13_04180 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D R0V13_03160 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D R0V13_03165 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D R0V13_02045 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D R0V13_03740 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D R0V13_02660 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D R0V13_09745 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D R0V13_04365 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D R0V13_04160 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D R0V13_05770 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D R0V13_06020 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D R0V13_06640 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D R0V13_10275 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D R0V13_03110 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D R0V13_10305 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D R0V13_03895 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D R0V13_03900 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D R0V13_00120 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D R0V13_07860 aminoacyl-tRNA deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D R0V13_02805 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D R0V13_08005 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D R0V13_00695 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D R0V13_04135 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D R0V13_05115 class I SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D R0V13_06820 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D R0V13_03140 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D R0V13_05760 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D R0V13_05290 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D R0V13_06825 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D R0V13_06930 mnmH; tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D R0V13_03960 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D R0V13_09965 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D R0V13_00515 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D R0V13_00530 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D R0V13_09535 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D R0V13_08025 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D R0V13_02295 nucleotidyltransferase family protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D R0V13_06755 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
C 03012 Translation factors [BR:fhm03012]
D R0V13_04355 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D R0V13_02175 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D R0V13_04295 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D R0V13_09930 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D R0V13_09935 fusA; elongation factor G K02355 fusA; elongation factor G
D R0V13_03120 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D R0V13_06030 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D R0V13_04305 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D R0V13_06025 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D R0V13_09990 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D R0V13_09790 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D R0V13_06620 efp; elongation factor P K02356 efp; elongation factor P
D R0V13_01200 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D R0V13_02225 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:fhm03110]
D R0V13_04265 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D R0V13_00685 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D R0V13_05135 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D R0V13_04505 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D R0V13_04385 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D R0V13_00555 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D R0V13_04390 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D R0V13_04380 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D R0V13_00550 co-chaperone GroES K04078 groES; chaperonin GroES
D R0V13_04970 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
C 04131 Membrane trafficking [BR:fhm04131]
D R0V13_07715 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D R0V13_02315 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D R0V13_01875 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:fhm03032]
D R0V13_03690 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D R0V13_09370 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D R0V13_05195 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D R0V13_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D R0V13_00060 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D R0V13_03235 ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D R0V13_05125 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D R0V13_02120 DnaD domain protein K03346 dnaB; replication initiation and membrane attachment protein
D R0V13_02125 dnaI; primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D R0V13_00040 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R0V13_10055 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R0V13_05280 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D R0V13_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D R0V13_05565 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D R0V13_00855 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D R0V13_00830 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D R0V13_02835 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D R0V13_01830 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D R0V13_00030 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D R0V13_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D R0V13_04540 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D R0V13_03315 DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:fhm03036]
D R0V13_09370 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D R0V13_05375 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D R0V13_05195 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D R0V13_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D R0V13_05370 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D R0V13_05235 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D R0V13_05230 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D R0V13_05925 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D R0V13_09975 septum formation initiator family protein K13052 divIC; cell division protein DivIC
D R0V13_01205 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D R0V13_04090 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D R0V13_05930 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ
D R0V13_06560 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D R0V13_01210 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D R0V13_05920 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D R0V13_02840 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA
D R0V13_03750 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D R0V13_02220 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein
D R0V13_05900 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein
D R0V13_04195 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D R0V13_05985 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D R0V13_04200 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D R0V13_04205 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D R0V13_05595 FtsW/RodA/SpoVE family cell cycle protein K05837 rodA; rod shape determining protein RodA
D R0V13_10265 AAA family ATPase K03496 parA; chromosome partitioning protein
D R0V13_04540 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D R0V13_10275 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D R0V13_10270 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D R0V13_04495 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D R0V13_05255 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D R0V13_05130 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
D R0V13_10060 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:fhm03400]
D R0V13_07260 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D R0V13_04415 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D R0V13_07020 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D R0V13_04805 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D R0V13_10280 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D R0V13_00105 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D R0V13_00880 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D R0V13_02100 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D R0V13_01830 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D R0V13_10110 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D R0V13_05555 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D R0V13_10175 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D R0V13_10170 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D R0V13_09770 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D R0V13_00980 rpoE; DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D R0V13_05480 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D R0V13_09985 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D R0V13_05320 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D R0V13_02850 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D R0V13_05310 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D R0V13_06670 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D R0V13_06665 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D R0V13_05280 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D R0V13_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D R0V13_05565 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D R0V13_00855 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D R0V13_00830 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D R0V13_00040 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R0V13_10055 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R0V13_05755 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D R0V13_05300 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D R0V13_05295 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D R0V13_05475 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D R0V13_00020 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D R0V13_04755 helix-turn-helix domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D R0V13_05415 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D R0V13_03890 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D R0V13_06650 AAA family ATPase K03631 recN; DNA repair protein RecN (Recombination protein N)
D R0V13_05145 recU; Holliday junction resolvase RecU K03700 recU; recombination protein U
D R0V13_05095 addA; helicase-exonuclease AddAB subunit AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D R0V13_05100 PD-(D/E)XK nuclease family protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D R0V13_00030 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D R0V13_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D R0V13_05195 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D R0V13_01870 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D R0V13_04925 Y-family DNA polymerase K03502 umuC; DNA polymerase V
D R0V13_07030 RecX family transcriptional regulator K03565 recX; regulatory protein
D R0V13_03980 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:fhm03029]
D R0V13_04355 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D R0V13_02175 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D R0V13_04295 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D R0V13_09930 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D R0V13_09935 fusA; elongation factor G K02355 fusA; elongation factor G
D R0V13_03885 era; GTPase Era K03595 era; GTPase
D R0V13_06280 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D R0V13_03765 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D R0V13_03810 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D R0V13_01845 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D R0V13_01850 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D R0V13_01840 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D R0V13_00040 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R0V13_10055 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R0V13_04385 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D R0V13_04380 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D R0V13_00555 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D R0V13_00550 co-chaperone GroES K04078 groES; chaperonin GroES
D R0V13_04390 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D R0V13_04160 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D R0V13_05770 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D R0V13_04085 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D R0V13_10300 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:fhm02000]
D R0V13_03455 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D R0V13_07800 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D R0V13_03460 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D R0V13_07795 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D R0V13_09035 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D R0V13_03940 ABC transporter transmembrane domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D R0V13_03945 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D R0V13_01050 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D R0V13_05825 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D R0V13_07010 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D R0V13_07005 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D R0V13_08755 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D R0V13_03815 ABC transporter ATP-binding protein K18216 steA; ATP-binding cassette, subfamily B, tetracycline resistant protein
D R0V13_03820 ABC transporter ATP-binding protein K18217 steB; ATP-binding cassette, subfamily B, tetracycline resistant protein
D R0V13_08685 peptide cleavage/export ABC transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D R0V13_09645 ABC transporter ATP-binding protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D R0V13_02765 ATP-binding cassette domain-containing protein K18231 msr; macrolide transport system ATP-binding/permease protein
D R0V13_04445 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D R0V13_08515 ABC transporter ATP-binding protein K15579 nrtD; nitrate/nitrite transport system ATP-binding protein
D R0V13_08170 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D R0V13_08520 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D R0V13_08165 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein
D R0V13_08330 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D R0V13_08510 ABC transporter permease subunit K15554 ssuC; sulfonate transport system permease protein
D R0V13_08160 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D R0V13_08335 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D R0V13_01740 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D R0V13_06250 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D R0V13_01745 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D R0V13_06260 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D R0V13_01750 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D R0V13_06255 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D R0V13_09510 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D R0V13_09515 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D R0V13_02955 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D R0V13_09520 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D R0V13_05070 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D R0V13_02950 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D R0V13_05080 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D R0V13_02945 ABC transporter permease subunit K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D R0V13_05085 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D R0V13_08325 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D R0V13_06140 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R0V13_08575 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R0V13_06215 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D R0V13_08595 extracellular solute-binding protein K10188 lacE; lactose/L-arabinose transport system substrate-binding protein
D R0V13_08590 sugar ABC transporter permease K10189 lacF; lactose/L-arabinose transport system permease protein
D R0V13_08585 carbohydrate ABC transporter permease K10190 lacG; lactose/L-arabinose transport system permease protein
D R0V13_02515 galactose ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D R0V13_02505 beta-methylgalactoside transporter K10541 mglC; methyl-galactoside transport system permease protein
D R0V13_02510 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D R0V13_06090 BMP family protein K07335 bmpA; basic membrane protein A and related proteins
D R0V13_04100 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D R0V13_04095 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D R0V13_06055 fetB; iron export ABC transporter permease subunit FetB K02069 STAR2; UDP-glucose/iron transport system permease protein
D R0V13_06050 ATP-binding cassette domain-containing protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D R0V13_06155 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D R0V13_06220 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D R0V13_06150 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D R0V13_06145 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D R0V13_01525 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D R0V13_01230 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D R0V13_01235 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D R0V13_01240 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D R0V13_05640 PhnD/SsuA/transferrin family substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D R0V13_09605 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D R0V13_05655 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D R0V13_09620 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D R0V13_05645 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D R0V13_09610 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D R0V13_08140 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D R0V13_08135 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D R0V13_08130 ATP-binding cassette domain-containing protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D R0V13_09735 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R0V13_09730 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R0V13_09725 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D R0V13_09720 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R0V13_00925 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D R0V13_05015 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D R0V13_05030 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D R0V13_07150 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D R0V13_07585 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D R0V13_08380 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D R0V13_00920 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D R0V13_07145 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D R0V13_07590 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D R0V13_08375 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D R0V13_00915 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D R0V13_07140 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D R0V13_07595 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D R0V13_08370 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D R0V13_04570 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D R0V13_04575 ATP-binding cassette domain-containing protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D R0V13_09710 ABC transporter permease subunit K17073 lysX1; putative lysine transport system substrate-binding protein
D R0V13_09705 amino acid ABC transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D R0V13_08430 transporter substrate-binding domain-containing protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D R0V13_08495 transporter substrate-binding domain-containing protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D R0V13_08425 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D R0V13_08420 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D R0V13_02550 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D R0V13_02695 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D R0V13_03800 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D R0V13_02555 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D R0V13_02700 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D R0V13_02560 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D R0V13_02705 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D R0V13_02565 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D R0V13_06795 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D R0V13_08460 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D R0V13_02570 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D R0V13_03595 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D R0V13_06790 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D R0V13_08455 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D R0V13_03575 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R0V13_05380 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R0V13_06810 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R0V13_08475 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R0V13_03580 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D R0V13_05390 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D R0V13_08470 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D R0V13_03585 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R0V13_05385 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R0V13_06800 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R0V13_08465 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R0V13_03590 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D R0V13_05400 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D R0V13_05395 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D R0V13_01085 iron chelate uptake ABC transporter family permease subunit K25283 yclO; iron-siderophore transport system permease protein
D R0V13_03830 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D R0V13_03835 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D R0V13_03840 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D R0V13_01125 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D R0V13_01120 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D R0V13_07900 zinc ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D R0V13_07890 metal ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein
D R0V13_07885 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein
D R0V13_07895 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D R0V13_04860 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D R0V13_03450 MptD family putative ECF transporter S component K16926 htsT; energy-coupling factor transport system substrate-specific component
D R0V13_09055 MptD family putative ECF transporter S component K16926 htsT; energy-coupling factor transport system substrate-specific component
D R0V13_03440 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D R0V13_09750 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D R0V13_09760 energy-coupling factor ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D R0V13_09755 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D R0V13_03445 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D R0V13_09045 energy-coupling factor ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D R0V13_07430 ATP-binding cassette domain-containing protein K20459 nukF; lantibiotic transport system ATP-binding protein
D R0V13_07440 ABC transporter permease K20461 nukG; lantibiotic transport system permease protein
D R0V13_09285 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit K20491 nisE; lantibiotic transport system permease protein
D R0V13_09290 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein
D R0V13_09280 lantibiotic protection ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D R0V13_07505 ABC transporter permease K19084 braE; bacitracin transport system permease protein
D R0V13_01210 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D R0V13_01205 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D R0V13_01545 ABC transporter permease K25157 ecsB; ABC-2 type transport system permease protein
D R0V13_01540 ABC transporter ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein
D R0V13_02875 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D R0V13_00775 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D R0V13_02870 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D R0V13_03505 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D R0V13_07675 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D R0V13_08850 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D R0V13_09395 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D R0V13_00630 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D R0V13_04060 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D R0V13_06910 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D R0V13_06920 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D R0V13_08200 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D R0V13_08940 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D R0V13_09330 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D R0V13_08915 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D R0V13_00620 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D R0V13_04055 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D R0V13_06915 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D R0V13_08195 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D R0V13_08920 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D R0V13_08945 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D R0V13_08965 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D R0V13_09325 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D R0V13_00825 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D R0V13_00675 cation:proton antiporter K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
D R0V13_06770 SLC13 family permease K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D R0V13_08235 SLC13 family permease K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D R0V13_08245 SLC13 family permease K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D R0V13_00635 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D R0V13_03465 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D R0V13_07230 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D R0V13_07835 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D R0V13_09030 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D R0V13_09170 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D R0V13_08615 MFS transporter K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D R0V13_02235 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D R0V13_02230 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D R0V13_10125 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D R0V13_10130 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D R0V13_03570 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D R0V13_03565 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D R0V13_03560 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D R0V13_00890 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D R0V13_04885 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D R0V13_02210 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D R0V13_05850 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D R0V13_00410 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D R0V13_02740 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D R0V13_01890 CidA/LrgA family protein K06518 cidA; holin-like protein
D R0V13_03970 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D R0V13_08735 BCCT family transporter K05020 opuD; glycine betaine transporter
D R0V13_02065 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D R0V13_03530 potassium transporter TrkG K03498 trkH; trk/ktr system potassium uptake protein
D R0V13_05635 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D R0V13_03525 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D R0V13_05630 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D R0V13_07400 codB; cytosine permease K10974 codB; cytosine permease
D R0V13_01105 solute carrier family 23 protein K02824 uraA; uracil permease
D R0V13_02395 ClC family H(+)/Cl(-) exchange transporter K03281 clcA; chloride channel protein, CIC family
D R0V13_01995 chromate transporter K07240 chrA; chromate transporter
D R0V13_02000 chromate transporter K07240 chrA; chromate transporter
D R0V13_09640 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D R0V13_07715 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D R0V13_07085 AEC family transporter K24180 mleP; malate permease and related proteins
D R0V13_07210 AEC family transporter K24180 mleP; malate permease and related proteins
D R0V13_02545 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D R0V13_05220 ECF transporter S component K23675 fmnP; riboflavin transporter
D R0V13_00295 thiT; energy-coupled thiamine transporter ThiT K16789 thiT; thiamine transporter
D R0V13_03145 hypothetical protein K16788 niaX; niacin transporter
D R0V13_02790 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D R0V13_06560 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D R0V13_03035 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D R0V13_00945 CpsD/CapB family tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D R0V13_00940 Wzz/FepE/Etk N-terminal domain-containing protein K19420 epsA; protein tyrosine kinase modulator
D R0V13_08175 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:fhm02044]
D R0V13_10165 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D R0V13_05910 YggT family protein K02221 yggT; YggT family protein
D R0V13_06540 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D R0V13_08875 ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D R0V13_06535 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D R0V13_01175 helicase-related protein K02240 comFA; competence protein ComFA
D R0V13_01180 ComF family protein K02242 comFC; competence protein ComFC
D R0V13_06715 comGA; competence type IV pilus ATPase ComGA K02243 comGA; competence protein ComGA
D R0V13_06720 type II secretion system F family protein K02244 comGB; competence protein ComGB
D R0V13_06725 comGC; competence type IV pilus major pilin ComGC K02245 comGC; competence protein ComGC
D R0V13_06730 comGD; competence type IV pilus minor pilin ComGD K02246 comGD; competence protein ComGD
D R0V13_06740 competence type IV pilus minor pilin ComGF K02248 comGF; competence protein ComGF
D R0V13_03250 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D R0V13_01195 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D R0V13_10230 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D R0V13_06765 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D R0V13_09800 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D R0V13_04115 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D R0V13_05355 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D R0V13_03965 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D R0V13_04085 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D R0V13_10300 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:fhm02042]
D R0V13_00410 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D R0V13_02740 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D R0V13_01040 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:fhm02022]
D R0V13_01220 histidine kinase dimerization/phospho-acceptor domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D R0V13_01215 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D R0V13_00425 histidine kinase dimerization/phospho-acceptor domain-containing protein K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D R0V13_00420 yycF; response regulator YycF K07668 vicR; two-component system, OmpR family, response regulator VicR
D R0V13_07515 hypothetical protein K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D R0V13_04080 ATP-binding protein K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D R0V13_04075 response regulator transcription factor K18941 arlR; two-component system, OmpR family, response regulator ArlR
D R0V13_09300 HAMP domain-containing sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D R0V13_09295 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D R0V13_05705 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D R0V13_05700 response regulator transcription factor K11618 liaR; two-component system, NarL family, response regulator LiaR
D R0V13_08785 response regulator transcription factor K14989 salR; two-component system, NarL family, secretion system response regulator SalR
D R0V13_08690 GHKL domain-containing protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D R0V13_08695 LytTR family DNA-binding domain-containing protein K07707 agrA; two-component system, LytTR family, response regulator AgrA
C 02035 Bacterial motility proteins [BR:fhm02035]
D R0V13_08140 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D R0V13_10165 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C 03037 Cilium and associated proteins [BR:fhm03037]
D R0V13_00675 cation:proton antiporter K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
C 04812 Cytoskeleton proteins [BR:fhm04812]
D R0V13_04195 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D R0V13_05985 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D R0V13_05920 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D R0V13_05925 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D R0V13_10265 AAA family ATPase K03496 parA; chromosome partitioning protein
C 04147 Exosome [BR:fhm04147]
D R0V13_02330 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D R0V13_02315 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D R0V13_02320 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D R0V13_00555 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D R0V13_04385 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D R0V13_07845 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D R0V13_09930 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D R0V13_02660 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D R0V13_00070 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R0V13_09795 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D R0V13_03925 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D R0V13_07995 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D R0V13_06955 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D R0V13_02610 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D R0V13_00090 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R0V13_03070 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D R0V13_07370 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D R0V13_06585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R0V13_03990 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D R0V13_02325 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D R0V13_01875 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:fhm02048]
D R0V13_07535 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D R0V13_07540 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D R0V13_07555 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D R0V13_07560 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D R0V13_09370 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D R0V13_01380 HNH endonuclease signature motif containing protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D R0V13_07635 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D R0V13_07640 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D R0V13_08365 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D R0V13_08390 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D R0V13_08395 type II toxin-antitoxin system Phd/YefM family antitoxin K19159 yefM; antitoxin YefM
D R0V13_05920 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D R0V13_04195 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D R0V13_05985 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D R0V13_04540 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D R0V13_04160 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D R0V13_05770 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:fhm01504]
D R0V13_03815 ABC transporter ATP-binding protein K18216 steA; ATP-binding cassette, subfamily B, tetracycline resistant protein
D R0V13_03820 ABC transporter ATP-binding protein K18217 steB; ATP-binding cassette, subfamily B, tetracycline resistant protein
D R0V13_00190 tet(M); tetracycline resistance ribosomal protection protein Tet(M) K18220 tetM; ribosomal protection tetracycline resistance protein
D R0V13_00175 erm(B); 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D R0V13_02765 ATP-binding cassette domain-containing protein K18231 msr; macrolide transport system ATP-binding/permease protein
D R0V13_01990 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D R0V13_01050 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:fhm00537]
D R0V13_03070 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:fhm03100]
D R0V13_06345 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D R0V13_05305 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D R0V13_05805 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D R0V13_08350 glutathione S-transferase C-terminal domain-containing protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D R0V13_08410 glutathione S-transferase C-terminal domain-containing protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D R0V13_07315 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D R0V13_05675 merA; mercury(II) reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D R0V13_06475 NAD(P)/FAD-dependent oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D R0V13_02520 ArsC/Spx/MgsR family protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D R0V13_06240 grdA; glycine/sarcosine/betaine reductase complex selenoprotein A K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D R0V13_06165 glycine/sarcosine/betaine reductase component B subunit K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D R0V13_07980 glycine/sarcosine/betaine reductase component B subunit K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D R0V13_06160 grdB; glycine reductase complex selenoprotein B K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D R0V13_07975 glycine/betaine/sarcosine/D-proline family reductase selenoprotein B K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D R0V13_06230 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha K21576 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D R0V13_06235 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta K21577 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D R0V13_01010 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D R0V13_03675 pflA; pyruvate formate-lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D R0V13_03695 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D R0V13_02995 glutaminyl-peptide cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D R0V13_03955 glutaminyl-peptide cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D R0V13_10090 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D R0V13_02815 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D R0V13_05420 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D R0V13_03845 pyruvate, water dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D R0V13_09920 pyruvate, water dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D R0V13_01320 DNA polymerase K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]
D R0V13_00325 cdaA; diadenylate cyclase CdaA K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D R0V13_10095 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D R0V13_06900 HAMP domain-containing sensor histidine kinase K10819 E2.7.13.3; histidine kinase [EC:2.7.13.3]
D R0V13_06760 alpha/beta fold hydrolase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D R0V13_00935 CpsB/CapC family capsule biosynthesis tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D R0V13_02255 hypothetical protein K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D R0V13_00050 DHH family phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D R0V13_03865 HDIG domain-containing protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D R0V13_08020 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D R0V13_10010 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D R0V13_10005 rnmV; ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D R0V13_00300 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D R0V13_04170 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D R0V13_07070 NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D R0V13_07195 NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D R0V13_02650 peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D R0V13_05585 carboxylate--amine ligase K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D R0V13_07660 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D R0V13_07875 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D R0V13_09715 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D R0V13_00810 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
D R0V13_01170 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D R0V13_07075 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D R0V13_07200 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D R0V13_00660 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D R0V13_06110 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D R0V13_05240 hypothetical protein K02859 ribT; riboflavin biosynthesis RibT protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D R0V13_02380 barstar family protein K03623 yhcO; ribonuclease inhibitor
D R0V13_06115 cold-shock protein K03704 cspA; cold shock protein
D R0V13_02050 spxA; transcriptional regulator SpxA K16509 spxA; regulatory protein spx
D R0V13_01690 Tex family protein K06959 tex; protein Tex
C 99974 Translation
D R0V13_06460 CvfD/Ygs/GSP13 family RNA-binding post-transcriptional regulator K07570 GSP13; general stress protein 13
D R0V13_09970 S1 domain-containing RNA-binding protein K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D R0V13_05140 tig; trigger factor K03545 tig; trigger factor
D R0V13_06750 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D R0V13_00645 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D R0V13_02055 adaptor protein MecA K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D R0V13_04190 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D R0V13_00870 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D R0V13_04485 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D R0V13_05160 DnaD domain protein K02086 dnaD; DNA replication protein
D R0V13_00235 mobT; MobT family relaxase K07467 nicK; putative DNA relaxase
D R0V13_05775 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D R0V13_04705 IS256 family transposase K07493 K07493; putative transposase
D R0V13_04710 transposase K07493 K07493; putative transposase
D R0V13_00095 IS3 family transposase K07497 K07497; putative transposase
D R0V13_01710 IS3 family transposase K07497 K07497; putative transposase
D R0V13_01760 IS3 family transposase K07497 K07497; putative transposase
D R0V13_02580 IS3 family transposase K07497 K07497; putative transposase
D R0V13_03000 IS3 family transposase K07497 K07497; putative transposase
D R0V13_03380 IS3 family transposase K07497 K07497; putative transposase
D R0V13_03745 IS3 family transposase K07497 K07497; putative transposase
D R0V13_05055 IS3 family transposase K07497 K07497; putative transposase
D R0V13_07055 IS3 family transposase K07497 K07497; putative transposase
D R0V13_07180 IS3 family transposase K07497 K07497; putative transposase
D R0V13_07235 IS3 family transposase K07497 K07497; putative transposase
D R0V13_07340 IS3 family transposase K07497 K07497; putative transposase
D R0V13_07630 IS3 family transposase K07497 K07497; putative transposase
D R0V13_07740 IS3 family transposase K07497 K07497; putative transposase
D R0V13_09160 IS3 family transposase K07497 K07497; putative transposase
D R0V13_09545 IS3 family transposase K07497 K07497; putative transposase
D R0V13_10020 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D R0V13_00835 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D R0V13_07460 hypothetical protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D R0V13_01765 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D R0V13_01770 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D R0V13_02060 alanine/glycine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D R0V13_09635 alanine/glycine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D R0V13_02720 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D R0V13_07265 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D R0V13_09200 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D R0V13_10295 jag; RNA-binding cell elongation regulator Jag/EloR K06346 jag; spoIIIJ-associated protein
D R0V13_03490 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D R0V13_03495 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
C 99993 Cell motility
C 99995 Signaling proteins
D R0V13_06570 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D R0V13_03860 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D R0V13_00615 biotin/lipoyl-binding protein K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D R0V13_01245 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D R0V13_08050 DUF4479 domain-containing protein K06878 K06878; tRNA-binding protein
D R0V13_00820 SufD family Fe-S cluster assembly protein K09015 sufD; Fe-S cluster assembly protein SufD
D R0V13_05600 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D R0V13_06840 LemA family protein K03744 lemA; LemA protein
D R0V13_05625 phage holin family protein K08972 K08972; putative membrane protein
D R0V13_02585 DUF368 domain-containing protein K08974 K08974; putative membrane protein
C 99997 Function unknown
D R0V13_00955 HD domain-containing protein K06885 K06885; uncharacterized protein
D R0V13_03155 HD domain-containing protein K06950 K06950; uncharacterized protein
D R0V13_08305 dicarboxylate/amino acid:cation symporter K06956 K06956; uncharacterized protein
D R0V13_04125 KH domain-containing protein K06960 K06960; uncharacterized protein
D R0V13_00285 NYN domain-containing protein K06962 K06962; uncharacterized protein
D R0V13_01110 zinc metallopeptidase K06973 K06973; uncharacterized protein
D R0V13_04940 N-acetyltransferase K06975 K06975; uncharacterized protein
D R0V13_07910 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D R0V13_07450 nucleotidyltransferase domain-containing protein K07074 K07074; uncharacterized protein
D R0V13_04530 nitroreductase family protein K07078 K07078; uncharacterized protein
D R0V13_02890 metallophosphoesterase K07095 K07095; uncharacterized protein
D R0V13_03150 transcription repressor NadR K07105 K07105; uncharacterized protein
D R0V13_04930 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein
D R0V13_02830 DUF554 domain-containing protein K07150 K07150; uncharacterized protein
D R0V13_00320 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D R0V13_06470 divergent PAP2 family protein K09775 K09775; uncharacterized protein
D R0V13_04110 sigma factor-like helix-turn-helix DNA-binding protein K09787 K09787; uncharacterized protein
D R0V13_05260 hypothetical protein K00243 K00243; uncharacterized protein
D R0V13_00640 YaaA family protein K09861 K09861; uncharacterized protein
D R0V13_03935 YneF family protein K09976 K09976; uncharacterized protein
D R0V13_04220 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein
D R0V13_06990 DUF402 domain-containing protein K07586 ygaC; uncharacterized protein
D R0V13_04345 YlxR family protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 3, 2024