+D GENES KO #

  KEGG Orthology (KO) - Gimibacter soli

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:gso00010] D PH603_00685 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D PH603_16235 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D PH603_05110 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PH603_11225 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D PH603_15465 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D PH603_10415 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PH603_15480 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PH603_15475 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PH603_15215 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D PH603_10375 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PH603_15670 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PH603_14725 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D PH603_04360 hypothetical protein K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PH603_10365 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D PH603_10360 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D PH603_10355 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PH603_10350 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_15830 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_16115 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PH603_16110 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PH603_05755 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PH603_06955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PH603_03180 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PH603_12755 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PH603_12865 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PH603_15415 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D PH603_00300 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:gso00020] D PH603_10470 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D PH603_12035 citryl-CoA lyase K01647 CS; citrate synthase [EC:2.3.3.1] D PH603_01760 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D PH603_09235 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PH603_15840 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D PH603_15835 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PH603_10350 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_15830 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_16115 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PH603_16110 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PH603_15845 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PH603_15850 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PH603_15900 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PH603_15895 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PH603_15910 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PH603_15905 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D PH603_13650 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D PH603_16345 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D PH603_15855 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PH603_00300 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D PH603_04360 hypothetical protein K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PH603_10365 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D PH603_10360 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D PH603_10355 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:gso00030] D PH603_05110 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PH603_16155 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D PH603_16150 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D PH603_02625 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D PH603_15485 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PH603_15300 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D PH603_10655 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D PH603_06950 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D PH603_14315 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D PH603_05305 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PH603_16145 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D PH603_16140 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D PH603_13150 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D PH603_14980 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D PH603_09825 DUF4147 domain-containing protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D PH603_15465 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D PH603_11225 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] C 00040 Pentose and glucuronate interconversions [PATH:gso00040] D PH603_14970 kduI; 5-dehydro-4-deoxy-D-glucuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D PH603_14975 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D PH603_02135 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PH603_10955 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PH603_05105 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PH603_02625 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D PH603_05945 SDR family NAD(P)-dependent oxidoreductase K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175] D PH603_05940 SMP-30/gluconolactonase/LRE family protein K14274 xylC; xylono-1,5-lactonase [EC:3.1.1.110] D PH603_05935 dihydroxy-acid dehydratase family protein K22186 xylD; xylonate dehydratase [EC:4.2.1.82] D PH603_05950 aldehyde dehydrogenase family protein K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-] C 00051 Fructose and mannose metabolism [PATH:gso00051] D PH603_06070 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D PH603_12910 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D PH603_05100 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D PH603_07965 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D PH603_11225 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D PH603_15465 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D PH603_10415 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PH603_10655 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D PH603_00275 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:gso00052] D PH603_15415 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D PH603_05020 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PH603_10945 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PH603_05105 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PH603_00685 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D PH603_16235 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D PH603_00710 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D PH603_08700 glycoside hydrolase family 97 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:gso00053] D PH603_02135 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PH603_10955 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PH603_14500 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D PH603_06955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:gso00500] D PH603_00710 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D PH603_08700 glycoside hydrolase family 97 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D PH603_05105 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PH603_05910 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_05915 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_05960 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_06060 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_13140 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_16320 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_05790 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6] D PH603_05795 glycosyl hydrolase family 65 protein K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64] D PH603_00685 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D PH603_16235 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D PH603_05110 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PH603_06070 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D PH603_12910 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:gso00520] D PH603_11330 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D PH603_16210 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D PH603_16170 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D PH603_06070 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D PH603_12910 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D PH603_05130 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PH603_16165 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PH603_14670 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D PH603_05135 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D PH603_09535 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D PH603_06525 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D PH603_00240 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D PH603_03700 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PH603_06735 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D PH603_10905 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D PH603_14275 glycoside hydrolase family 43 protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D PH603_00685 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D PH603_16235 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D PH603_05105 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PH603_02135 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PH603_10955 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PH603_05020 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PH603_10945 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PH603_14500 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D PH603_00275 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D PH603_05110 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PH603_07965 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D PH603_05100 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] C 00620 Pyruvate metabolism [PATH:gso00620] D PH603_03180 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PH603_12755 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PH603_16115 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PH603_16110 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PH603_04360 hypothetical protein K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PH603_10365 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D PH603_10360 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D PH603_10355 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PH603_10350 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_15830 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_12400 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D PH603_05755 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PH603_15670 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PH603_00170 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D PH603_09455 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D PH603_09450 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PH603_03795 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D PH603_07860 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D PH603_06955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PH603_12865 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PH603_06165 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D PH603_04550 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D PH603_14395 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D PH603_06800 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D PH603_01990 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D PH603_15855 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PH603_13650 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D PH603_16345 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D PH603_00300 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D PH603_14725 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D PH603_01020 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D PH603_03835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_08915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_09375 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_13515 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:gso00630] D PH603_01025 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D PH603_03180 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PH603_12755 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PH603_01020 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D PH603_15855 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PH603_10470 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D PH603_12035 citryl-CoA lyase K01647 CS; citrate synthase [EC:2.3.3.1] D PH603_01760 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D PH603_03835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_08915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_09375 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_06875 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D PH603_04430 MaoC family dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D PH603_08615 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D PH603_07850 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D PH603_07840 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D PH603_10550 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D PH603_10555 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D PH603_00435 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D PH603_06800 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D PH603_07825 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D PH603_10715 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D PH603_02965 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_08440 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_11175 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_11195 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_14910 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_10650 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PH603_13850 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D PH603_13845 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D PH603_13860 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PH603_10350 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_15830 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_13855 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D PH603_09825 DUF4147 domain-containing protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D PH603_16140 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D PH603_14405 kynB; arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9] D PH603_13220 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D PH603_14825 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] C 00640 Propanoate metabolism [PATH:gso00640] D PH603_03180 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PH603_12755 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PH603_12865 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PH603_10350 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_15830 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_09370 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D PH603_01155 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D PH603_03830 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PH603_00170 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D PH603_09455 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D PH603_09450 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PH603_03795 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D PH603_02750 acetyl ornithine aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PH603_16330 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PH603_11155 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D PH603_07850 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D PH603_07840 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D PH603_08615 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D PH603_10550 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D PH603_10555 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D PH603_15850 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PH603_15845 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PH603_05170 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PH603_02790 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:gso00650] D PH603_03835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_08915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_09375 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_04240 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D PH603_13325 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D PH603_03830 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PH603_01155 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D PH603_09370 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D PH603_12400 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D PH603_04430 MaoC family dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D PH603_04145 alpha/beta fold hydrolase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D PH603_11240 phaC; class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D PH603_06180 phaZ; polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D PH603_06875 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D PH603_02740 hypothetical protein K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D PH603_02745 hypothetical protein K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D PH603_15900 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PH603_15895 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PH603_15910 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PH603_15905 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D PH603_02750 acetyl ornithine aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PH603_16330 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PH603_12700 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PH603_16260 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PH603_16115 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PH603_16110 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PH603_12000 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D PH603_14925 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D PH603_14075 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D PH603_14070 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D PH603_06175 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D PH603_12450 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PH603_13535 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PH603_15775 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PH603_13530 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:gso00660] D PH603_12450 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PH603_13535 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PH603_15775 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PH603_13530 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PH603_15850 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PH603_15845 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PH603_12820 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D PH603_15960 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PH603_15955 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D PH603_15950 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:gso00562] D PH603_12125 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PH603_14885 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PH603_15430 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PH603_12130 phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8] D PH603_15010 phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8] D PH603_12140 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D PH603_12160 iolE; myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44] D PH603_12155 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D PH603_12145 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D PH603_12150 iolC; 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D PH603_05170 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PH603_10415 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:gso00190] D PH603_08530 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D PH603_08535 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D PH603_08540 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D PH603_08545 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D PH603_08550 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D PH603_08555 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D PH603_08560 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D PH603_08565 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D PH603_08570 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D PH603_08575 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D PH603_08580 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D PH603_08585 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D PH603_08590 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D PH603_08595 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D PH603_15900 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PH603_15895 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PH603_15910 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PH603_15905 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D PH603_13745 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D PH603_13740 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D PH603_13735 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D PH603_14025 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D PH603_14010 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D PH603_14030 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D PH603_14035 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D PH603_14015 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D PH603_09770 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D PH603_16060 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D PH603_16055 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D PH603_16050 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D PH603_16045 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D PH603_01035 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D PH603_01040 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D PH603_01210 cytochrome c family protein K08738 CYC; cytochrome c D PH603_11110 cytochrome c family protein K08738 CYC; cytochrome c D PH603_15270 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D PH603_15260 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D PH603_15265 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D PH603_15275 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D PH603_15255 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D PH603_07040 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D PH603_07050 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D PH603_07055 ATP F0F1 synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D PH603_07045 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D PH603_14095 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D PH603_09700 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:gso00710] D PH603_15475 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PH603_15480 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PH603_15465 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D PH603_11225 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D PH603_15485 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D PH603_10655 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D PH603_10415 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D PH603_02625 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D PH603_15300 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D PH603_00300 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D PH603_14725 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D PH603_01990 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D PH603_15855 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:gso00720] D PH603_14725 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D PH603_15855 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PH603_13650 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D PH603_16345 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D PH603_15900 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D PH603_15895 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D PH603_15910 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D PH603_15905 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D PH603_15845 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D PH603_15850 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D PH603_03835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_08915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_09375 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_16115 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D PH603_16110 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D PH603_09235 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PH603_01760 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D PH603_00170 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D PH603_09455 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D PH603_09450 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PH603_03795 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D PH603_08615 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D PH603_10550 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D PH603_10555 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D PH603_01535 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D PH603_07130 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D PH603_03180 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PH603_12755 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:gso00680] D PH603_05755 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PH603_05750 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D PH603_10650 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PH603_09825 DUF4147 domain-containing protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D PH603_10375 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PH603_15855 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PH603_15465 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D PH603_11225 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D PH603_02775 NAD(P)-binding protein K00317 dmd-tmd; dimethylamine/trimethylamine dehydrogenase [EC:1.5.8.1 1.5.8.2] D PH603_12725 methylamine dehydrogenase light chain K15228 mauA; methylamine dehydrogenase light chain [EC:1.4.9.1] D PH603_12710 amine dehydrogenase large subunit K15229 mauB; methylamine dehydrogenase heavy chain [EC:1.4.9.1] D PH603_11580 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1] D PH603_03180 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PH603_12755 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PH603_15215 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D PH603_14630 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PH603_14635 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D PH603_13545 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:gso00910] D PH603_07250 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D PH603_12525 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D PH603_12520 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D PH603_07255 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D PH603_07260 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D PH603_07270 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D PH603_12540 molybdopterin-dependent oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D PH603_12530 nirB; nitrite reductase large subunit NirB K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4] D PH603_12535 nirD; nitrite reductase small subunit NirD K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4] D PH603_13760 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D PH603_15160 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D PH603_02710 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D PH603_02965 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_08440 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_11175 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_11195 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_14910 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_01795 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D PH603_01800 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D PH603_07280 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D PH603_13730 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D PH603_00350 carbonic anhydrase family protein K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:gso00920] D PH603_12250 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D PH603_04960 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D PH603_04955 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D PH603_06305 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D PH603_04510 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D PH603_04520 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D PH603_06135 TIGR01244 family sulfur transferase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D PH603_11480 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PH603_00860 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D PH603_00855 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D PH603_08965 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D PH603_04170 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D PH603_05360 alpha/beta fold hydrolase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D PH603_02155 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D PH603_05605 AMP-binding protein K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D PH603_14575 long-chain fatty acid--CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D PH603_03840 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D PH603_08775 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:gso00061] D PH603_00170 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D PH603_09455 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D PH603_09450 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D PH603_03795 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D PH603_09590 acyl carrier protein K02078 acpP; acyl carrier protein D PH603_09580 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D PH603_09595 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PH603_09585 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PH603_10475 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D PH603_08830 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D PH603_00075 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D PH603_02720 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PH603_07455 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PH603_08940 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:gso00071] D PH603_03835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_08915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_09375 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_03830 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PH603_01155 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D PH603_13325 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D PH603_09370 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D PH603_08900 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D PH603_07915 acyl-CoA dehydrogenase family protein K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8] D PH603_13290 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D PH603_02720 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PH603_07455 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PH603_08940 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PH603_02935 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D PH603_07145 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D PH603_05755 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PH603_06955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:gso00561] D PH603_09825 DUF4147 domain-containing protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D PH603_06955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PH603_07460 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D PH603_09880 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D PH603_12260 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D PH603_10585 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D PH603_08050 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D PH603_00865 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PH603_04815 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] C 00564 Glycerophospholipid metabolism [PATH:gso00564] D PH603_03230 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D PH603_00735 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D PH603_07445 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D PH603_12245 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D PH603_08050 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D PH603_00865 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D PH603_04735 alpha/beta hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5] D PH603_09395 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D PH603_10275 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D PH603_08675 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D PH603_09260 phosphatidylcholine/phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D PH603_09255 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D PH603_06780 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D PH603_10330 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D PH603_01670 phospholipase D-like domain-containing protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:gso00600] D PH603_16210 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids [PATH:gso01040] D PH603_03935 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D PH603_08885 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D PH603_13455 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:gso00230] D PH603_14315 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D PH603_05305 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D PH603_10535 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D PH603_14145 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D PH603_09675 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D PH603_01005 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D PH603_08375 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D PH603_08385 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D PH603_08380 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D PH603_09680 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D PH603_15315 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D PH603_15320 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D PH603_08390 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D PH603_13250 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D PH603_02635 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D PH603_11290 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PH603_14340 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D PH603_05310 polyphenol oxidase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D PH603_04210 phosphoribosyltransferase family protein K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D PH603_09300 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D PH603_09670 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PH603_02215 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D PH603_09720 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PH603_09610 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D PH603_00165 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PH603_09425 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PH603_00160 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D PH603_11345 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D PH603_08215 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D PH603_09290 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D PH603_09705 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D PH603_14620 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D PH603_15510 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D PH603_07770 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D PH603_10280 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D PH603_04960 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D PH603_04955 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D PH603_15085 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] C 00240 Pyrimidine metabolism [PATH:gso00240] D PH603_05440 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PH603_10980 ATP-grasp domain-containing protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PH603_05445 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PH603_08060 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D PH603_15070 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D PH603_08055 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D PH603_14705 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D PH603_14805 D-aminoacylase K01465 URA4; dihydroorotase [EC:3.5.2.3] D PH603_02100 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D PH603_08220 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D PH603_03125 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D PH603_08660 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D PH603_09670 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PH603_10280 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D PH603_02335 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D PH603_03665 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D PH603_10405 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D PH603_03105 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D PH603_11290 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PH603_14330 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D PH603_15510 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D PH603_14325 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D PH603_03710 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D PH603_00165 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PH603_09425 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PH603_00160 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D PH603_10005 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D PH603_01185 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PH603_14320 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D PH603_08475 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D PH603_13625 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:gso00250] D PH603_11705 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PH603_01485 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D PH603_08980 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D PH603_08955 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D PH603_15065 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PH603_08975 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D PH603_01555 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PH603_04225 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PH603_14620 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D PH603_13250 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D PH603_08060 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D PH603_15070 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D PH603_02750 acetyl ornithine aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PH603_16330 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PH603_12700 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PH603_16260 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PH603_01795 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D PH603_01800 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D PH603_02710 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D PH603_02735 aldehyde dehydrogenase family protein K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D PH603_14785 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D PH603_02965 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_08440 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_11175 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_11195 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_14910 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_05440 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PH603_10980 ATP-grasp domain-containing protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PH603_05445 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PH603_08380 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D PH603_05130 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PH603_16165 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PH603_10535 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:gso00260] D PH603_00080 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PH603_15945 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PH603_11230 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D PH603_13920 thrB; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D PH603_13995 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D PH603_10650 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PH603_06800 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D PH603_09825 DUF4147 domain-containing protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D PH603_15215 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D PH603_14630 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PH603_14635 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D PH603_13545 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D PH603_10670 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D PH603_09320 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D PH603_13850 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D PH603_13845 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D PH603_13860 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PH603_10350 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_15830 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_13855 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D PH603_09260 phosphatidylcholine/phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D PH603_01010 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D PH603_09105 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PH603_11145 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PH603_01000 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D PH603_03800 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D PH603_03805 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:gso00270] D PH603_00860 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D PH603_00855 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D PH603_08965 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D PH603_11485 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PH603_07140 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D PH603_00255 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PH603_00215 acyl-homoserine-lactone synthase K22955 traI; acyl homoserine lactone synthase [EC:2.3.1.184] D PH603_05310 polyphenol oxidase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D PH603_06865 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D PH603_06190 cystathionine gamma-synthase family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D PH603_06160 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D PH603_03645 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PH603_00260 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D PH603_00080 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PH603_15945 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PH603_11230 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D PH603_04170 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D PH603_05360 alpha/beta fold hydrolase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D PH603_02155 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D PH603_13720 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PH603_14115 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D PH603_02240 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D PH603_11705 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PH603_11480 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PH603_01000 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D PH603_15855 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D PH603_01010 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D PH603_14630 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PH603_14635 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:gso00280] D PH603_13720 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PH603_09050 Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D PH603_10350 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_15830 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_09370 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D PH603_08900 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D PH603_09065 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D PH603_16420 acyl-CoA dehydrogenase family protein K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D PH603_01155 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D PH603_03830 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PH603_07850 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D PH603_07840 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D PH603_08615 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D PH603_10550 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D PH603_10555 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D PH603_05195 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D PH603_08300 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D PH603_05170 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D PH603_06955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PH603_11155 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D PH603_09070 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D PH603_09080 carboxyl transferase domain-containing protein K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D PH603_09075 enoyl-CoA hydratase-related protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D PH603_12000 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D PH603_14925 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D PH603_14075 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D PH603_14070 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D PH603_03835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_08915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_09375 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:gso00290] D PH603_09105 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PH603_11145 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D PH603_15960 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D PH603_15955 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D PH603_15950 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D PH603_12450 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PH603_13535 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PH603_15775 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PH603_13530 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PH603_13525 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D PH603_11380 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D PH603_13720 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PH603_09050 Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D PH603_13515 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:gso00300] D PH603_11230 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D PH603_00080 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PH603_15945 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PH603_08155 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PH603_02400 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D PH603_04050 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D PH603_03340 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D PH603_04055 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D PH603_16000 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D PH603_04215 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D PH603_05635 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D PH603_06700 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D PH603_02060 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D PH603_06705 Mur ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:gso00310] D PH603_15780 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D PH603_15835 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PH603_10350 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_15830 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_13290 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D PH603_01155 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D PH603_03830 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PH603_03835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_08915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_09375 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_01000 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D PH603_12700 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PH603_16260 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PH603_14545 CaiB/BaiF CoA-transferase family protein K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-] D PH603_16275 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D PH603_06955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:gso00220] D PH603_03345 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D PH603_01555 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PH603_04225 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PH603_08380 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D PH603_02965 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_08440 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_11175 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_11195 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_14910 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_05440 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PH603_10980 ATP-grasp domain-containing protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D PH603_05445 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D PH603_02710 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D PH603_11705 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PH603_00130 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D PH603_04030 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D PH603_09845 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D PH603_03340 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:gso00330] D PH603_11995 hydantoinase/oxoprolinase family protein K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D PH603_11990 hydantoinase B/oxoprolinase family protein K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D PH603_11385 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D PH603_03585 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D PH603_15240 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D PH603_06360 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D PH603_12695 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D PH603_07080 FAD-dependent oxidoreductase K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6] D PH603_06955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PH603_09320 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D PH603_05210 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D PH603_05220 astB; N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D PH603_05215 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D PH603_11170 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D PH603_11180 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D PH603_05335 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D PH603_14785 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D PH603_02735 aldehyde dehydrogenase family protein K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D PH603_15190 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D PH603_15195 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D PH603_04080 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D PH603_11705 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PH603_16275 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00340 Histidine metabolism [PATH:gso00340] D PH603_03690 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D PH603_14625 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D PH603_02545 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D PH603_04575 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D PH603_02555 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D PH603_02560 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D PH603_02550 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D PH603_02565 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D PH603_04175 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PH603_04740 hisN; histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D PH603_03685 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D PH603_14830 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D PH603_14835 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D PH603_14850 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D PH603_14845 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13] D PH603_14825 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] D PH603_06955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PH603_09320 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] C 00350 Tyrosine metabolism [PATH:gso00350] D PH603_11705 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PH603_04175 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PH603_08995 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D PH603_09010 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D PH603_09005 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D PH603_16065 aminotransferase class V-fold PLP-dependent enzyme K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D PH603_09320 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D PH603_05755 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PH603_12850 Gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] D PH603_09820 5-carboxymethyl-2-hydroxymuconate Delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D PH603_12700 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PH603_16260 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PH603_12460 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] D PH603_13340 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] C 00360 Phenylalanine metabolism [PATH:gso00360] D PH603_09015 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D PH603_16065 aminotransferase class V-fold PLP-dependent enzyme K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D PH603_09320 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D PH603_10510 enoyl-CoA hydratase-related protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D PH603_13300 pcaF; 3-oxoadipyl-CoA thiolase K02615 paaJ; 3-oxo-5,6-didehydrosuberyl-CoA/3-oxoadipyl-CoA thiolase [EC:2.3.1.223 2.3.1.174] D PH603_01155 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D PH603_04240 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D PH603_11705 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PH603_04175 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PH603_08995 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D PH603_07355 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D PH603_16275 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D PH603_00970 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D PH603_01265 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D PH603_02935 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D PH603_07145 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D PH603_12405 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D PH603_14965 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D PH603_12395 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D PH603_12400 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00380 Tryptophan metabolism [PATH:gso00380] D PH603_14400 tryptophan 2,3-dioxygenase family protein K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D PH603_14405 kynB; arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9] D PH603_06075 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D PH603_12440 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D PH603_12380 nbaC; 3-hydroxyanthranilate 3,4-dioxygenase K00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6] D PH603_12375 amidohydrolase family protein K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45] D PH603_02970 aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D PH603_12410 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D PH603_12385 RidA family protein K15067 amnD; 2-aminomuconate deaminase [EC:3.5.99.5] D PH603_15835 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PH603_10350 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_15830 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_13290 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D PH603_01155 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D PH603_03830 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PH603_03835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_08915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_09375 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_16065 aminotransferase class V-fold PLP-dependent enzyme K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D PH603_09320 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D PH603_06955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PH603_00970 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D PH603_01265 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:gso00400] D PH603_10710 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PH603_00200 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D PH603_09460 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D PH603_02340 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D PH603_00195 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D PH603_03095 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D PH603_08825 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D PH603_10425 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D PH603_10435 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D PH603_10440 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D PH603_03810 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D PH603_10445 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D PH603_03800 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D PH603_03805 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D PH603_14755 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5] D PH603_04180 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D PH603_01205 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D PH603_11705 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PH603_04175 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PH603_09015 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:gso00410] D PH603_11370 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D PH603_02750 acetyl ornithine aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PH603_16330 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PH603_07080 FAD-dependent oxidoreductase K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6] D PH603_06955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PH603_07945 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D PH603_11155 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D PH603_01155 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D PH603_03830 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PH603_09370 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D PH603_05170 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:gso00430] D PH603_06555 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PH603_14180 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PH603_08975 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D PH603_02710 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] C 00440 Phosphonate and phosphinate metabolism D PH603_10025 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:gso00450] D PH603_11485 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D PH603_07140 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D PH603_06190 cystathionine gamma-synthase family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D PH603_03285 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D PH603_05350 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D PH603_04960 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D PH603_04955 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D PH603_03610 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D PH603_10015 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:gso00460] D PH603_05910 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_05915 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_05960 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_06060 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_13140 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_16320 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_06555 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PH603_14180 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PH603_08980 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D PH603_08955 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D PH603_10650 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:gso00470] D PH603_16275 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D PH603_02050 hypothetical protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PH603_01000 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D PH603_08380 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D PH603_15605 aspartate/glutamate racemase family protein K01776 murI; glutamate racemase [EC:5.1.1.3] D PH603_06715 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D PH603_00910 DUF1611 domain-containing protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312] D PH603_00915 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D PH603_05645 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D PH603_05705 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D PH603_06080 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D PH603_16000 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D PH603_04215 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D PH603_05635 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D PH603_04745 FAD-binding oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6] D PH603_13600 4-hydroxyproline epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8] D PH603_13605 dihydrodipicolinate synthase family protein K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22] D PH603_07355 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:gso00480] D PH603_06555 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PH603_14180 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PH603_06590 hydantoinase B/oxoprolinase family protein K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9] D PH603_14115 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D PH603_02240 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D PH603_01230 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D PH603_09635 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D PH603_10765 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D PH603_00875 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PH603_00985 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PH603_01790 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PH603_04235 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PH603_09030 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PH603_09905 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PH603_12300 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PH603_14565 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PH603_15425 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PH603_16120 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D PH603_09235 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D PH603_16155 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D PH603_06975 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D PH603_07075 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D PH603_15760 redoxin domain-containing protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D PH603_13970 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D PH603_03585 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D PH603_15240 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:gso00511] D PH603_16210 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00540 Lipopolysaccharide biosynthesis [PATH:gso00540] D PH603_04970 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D PH603_04930 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D PH603_04935 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D PH603_04940 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D PH603_13820 lipid A deacylase LpxR family protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] C 00542 O-Antigen repeat unit biosynthesis [PATH:gso00542] D PH603_12655 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:gso00541] D PH603_05105 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D PH603_05020 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PH603_10945 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D PH603_02135 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PH603_10955 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D PH603_14500 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D PH603_05075 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PH603_05085 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D PH603_05090 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D PH603_05080 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D PH603_05100 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D PH603_07965 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D PH603_05135 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D PH603_10905 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] C 00550 Peptidoglycan biosynthesis [PATH:gso00550] D PH603_03700 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PH603_06735 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D PH603_06730 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D PH603_06715 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D PH603_06700 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D PH603_02050 hypothetical protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PH603_02060 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D PH603_06705 Mur ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D PH603_08670 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D PH603_01805 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D PH603_06710 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D PH603_06725 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D PH603_00595 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PH603_09490 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PH603_13485 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D PH603_06695 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D PH603_10000 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:gso00552] D PH603_01805 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D PH603_12655 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:gso00543] D PH603_12655 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D PH603_11650 hypothetical protein K19294 algI; alginate O-acetyltransferase complex protein AlgI D PH603_11610 undecaprenyl-phosphate glucose phosphotransferase K20997 pslA; polysaccharide biosynthesis protein PslA D PH603_00860 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D PH603_03365 acyltransferase K16560 exoH; succinoglycan biosynthesis protein ExoH B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:gso00730] D PH603_08325 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D PH603_14665 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D PH603_09545 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PH603_09550 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PH603_08795 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D PH603_09465 thiS; sulfur carrier protein ThiS K03149 thiG; thiazole synthase [EC:2.8.1.10] D PH603_02465 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D PH603_15460 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D PH603_10615 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D PH603_13385 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D PH603_11055 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PH603_07770 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:gso00740] D PH603_02450 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D PH603_10630 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D PH603_12255 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D PH603_10640 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D PH603_10625 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D PH603_10635 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D PH603_04435 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D PH603_12250 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D PH603_15345 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:gso00750] D PH603_08845 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D PH603_14635 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D PH603_09620 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D PH603_08230 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D PH603_13995 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:gso00760] D PH603_01485 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D PH603_12325 DUF108 domain-containing protein K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21] D PH603_12365 aspartate dehydrogenase K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21] D PH603_06830 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D PH603_06825 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D PH603_14340 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D PH603_11290 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D PH603_15200 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D PH603_10280 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D PH603_03970 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D PH603_10700 NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D PH603_10335 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D PH603_03945 cobB; NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D PH603_11885 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D PH603_15580 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D PH603_15585 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D PH603_15575 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D PH603_02990 aldehyde dehydrogenase family protein K19700 sap; 3-succinoylsemialdehyde-pyridine dehydrogenase [EC:1.2.1.83] D PH603_12700 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D PH603_16260 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:gso00770] D PH603_12450 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PH603_13535 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PH603_15775 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D PH603_13530 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D PH603_13525 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D PH603_11380 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D PH603_09725 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D PH603_07945 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D PH603_08605 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D PH603_01180 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D PH603_10280 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D PH603_09960 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D PH603_02345 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D PH603_04925 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D PH603_13720 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PH603_11370 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D PH603_06955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:gso00780] D PH603_09595 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PH603_09585 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PH603_10475 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D PH603_08830 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D PH603_03900 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D PH603_11800 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D PH603_03910 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D PH603_03895 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D PH603_08600 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:gso00785] D PH603_07875 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D PH603_10345 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D PH603_10350 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_15830 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_04360 hypothetical protein K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D PH603_10365 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D PH603_10360 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D PH603_10355 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D PH603_15840 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D PH603_15835 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D PH603_13850 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D PH603_13845 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D PH603_13860 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PH603_13855 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:gso00790] D PH603_04580 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D PH603_11055 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PH603_06790 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D PH603_08205 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D PH603_14675 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D PH603_13585 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D PH603_03790 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D PH603_02450 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D PH603_10630 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D PH603_12255 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D PH603_04355 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D PH603_03950 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D PH603_09015 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D PH603_11460 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D PH603_11455 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D PH603_11470 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D PH603_06110 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D PH603_07240 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D PH603_10450 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D PH603_06770 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D PH603_06105 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D PH603_07290 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D PH603_12550 molybdopterin-binding protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D PH603_14930 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D PH603_11770 NTP transferase domain-containing protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D PH603_07305 NTP transferase domain-containing protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:gso00670] D PH603_13585 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D PH603_01535 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D PH603_10650 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D PH603_09675 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D PH603_02635 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D PH603_01960 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D PH603_13860 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D PH603_07140 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D PH603_13625 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D PH603_13220 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D PH603_07130 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D PH603_15505 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:gso00860] D PH603_10670 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D PH603_10465 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PH603_10695 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PH603_10680 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D PH603_03240 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D PH603_03245 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D PH603_02325 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D PH603_13755 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D PH603_08400 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D PH603_02320 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D PH603_04000 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D PH603_04530 cysG; siroheme synthase CysG K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D PH603_12545 cysG; siroheme synthase CysG K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D PH603_14025 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D PH603_09770 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D PH603_01745 cobS; cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D PH603_01740 cobT; cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2] D PH603_04255 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D PH603_00620 hypothetical protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D PH603_10755 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D PH603_03415 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:gso00130] D PH603_14100 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D PH603_14860 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D PH603_15345 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D PH603_00085 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D PH603_02420 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D PH603_01170 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D PH603_04280 demethoxyubiquinone hydroxylase family protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D PH603_12045 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D PH603_08995 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:gso00900] D PH603_08795 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D PH603_08680 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D PH603_10325 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] D PH603_14505 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D PH603_00060 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D PH603_13915 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D PH603_03835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_08915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_09375 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_15345 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D PH603_08790 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D PH603_14770 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D PH603_08670 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:gso00906] D PH603_09860 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:gso00903] D PH603_06955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D PH603_06930 alpha/beta hydrolase fold domain-containing protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] C 00907 Pinene, camphor and geraniol degradation [PATH:gso00907] D PH603_01155 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D PH603_03830 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PH603_16450 SDR family oxidoreductase K13774 atuB; citronellol/citronellal dehydrogenase D PH603_07450 NAD(P)-dependent oxidoreductase K13775 atuG; citronellol/citronellal dehydrogenase D PH603_16440 acyl-CoA dehydrogenase family protein K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-] D PH603_16430 biotin carboxylase N-terminal domain-containing protein K13777 atuF; geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5] D PH603_16445 acyl-CoA carboxylase subunit beta K13778 atuC; geranyl-CoA carboxylase beta subunit [EC:6.4.1.5] D PH603_16435 enoyl-CoA hydratase-related protein K13779 atuE; isohexenylglutaconyl-CoA hydratase [EC:4.2.1.57] D PH603_12000 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D PH603_14925 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D PH603_15485 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:gso00523] D PH603_05075 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PH603_05085 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D PH603_05090 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D PH603_05080 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D PH603_08930 NDP-hexose 2,3-dehydratase family protein K16435 evaA; dTDP-4-dehydro-6-deoxy-alpha-D-glucopyranose 2,3-dehydratase [EC:4.2.1.159] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D PH603_09875 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21] C 01055 Biosynthesis of vancomycin group antibiotics [PATH:gso01055] D PH603_05085 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D PH603_08930 NDP-hexose 2,3-dehydratase family protein K16435 evaA; dTDP-4-dehydro-6-deoxy-alpha-D-glucopyranose 2,3-dehydratase [EC:4.2.1.159] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:gso00946] D PH603_05910 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_05915 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_05960 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_06060 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_13140 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_16320 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids [PATH:gso00996] D PH603_12870 p-hydroxycinnamoyl CoA hydratase/lyase K18383 ferB; feruloyl-CoA hydratase/lyase [EC:4.1.2.61] C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis [PATH:gso00311] D PH603_08290 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11] D PH603_08950 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:gso00332] D PH603_15190 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D PH603_15195 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:gso00261] D PH603_04960 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D PH603_04955 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D PH603_00080 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D PH603_15945 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D PH603_08155 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D PH603_02400 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:gso00521] D PH603_00685 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D PH603_16235 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D PH603_12125 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PH603_14885 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PH603_15430 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D PH603_12140 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D PH603_05075 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PH603_05085 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D PH603_05090 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D PH603_05080 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D PH603_00685 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D PH603_16235 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:gso00525] D PH603_05075 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D PH603_05085 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:gso00401] D PH603_04180 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D PH603_11705 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PH603_04175 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis D PH603_00690 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D PH603_01310 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D PH603_02810 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D PH603_06040 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D PH603_13095 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D PH603_13100 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D PH603_16220 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] C 00405 Phenazine biosynthesis D PH603_10425 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D PH603_10435 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D PH603_09580 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D PH603_09585 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PH603_08830 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D PH603_09590 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:gso00999] D PH603_00255 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D PH603_02340 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D PH603_05910 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_05915 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_05960 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_06060 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_13140 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D PH603_16320 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:gso00362] D PH603_12405 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D PH603_14965 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D PH603_12395 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D PH603_12400 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D PH603_02970 aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D PH603_12410 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D PH603_05425 tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D PH603_12390 fumarylacetoacetate hydrolase family protein K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D PH603_12840 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D PH603_12845 class III extradiol dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] D PH603_12850 Gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] D PH603_12810 amidohydrolase family protein K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57] D PH603_12815 4-oxalomesaconate tautomerase K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8] D PH603_12835 amidohydrolase family protein K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83] D PH603_12820 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D PH603_02935 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D PH603_07145 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D PH603_01235 2Fe-2S iron-sulfur cluster-binding protein K04755 fdx; ferredoxin, 2Fe-2S D PH603_02930 2Fe-2S iron-sulfur cluster-binding protein K04755 fdx; ferredoxin, 2Fe-2S D PH603_09555 2Fe-2S iron-sulfur cluster-binding protein K04755 fdx; ferredoxin, 2Fe-2S D PH603_12855 pobA; 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D PH603_03830 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PH603_13325 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D PH603_13290 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D PH603_01155 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D PH603_04240 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D PH603_03835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_08915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_09375 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:gso00627] D PH603_07860 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D PH603_15345 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D PH603_12420 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein K15058 amnA; 2-aminophenol/2-amino-5-chlorophenol 1,6-dioxygenase subunit alpha D PH603_12425 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein K15059 amnB; 2-aminophenol/2-amino-5-chlorophenol 1,6-dioxygenase subunit beta [EC:1.13.11.74 1.13.11.76] D PH603_12895 aromatic ring-hydroxylating dioxygenase subunit alpha K03862 vanA; vanillate monooxygenase [EC:1.14.13.82] D PH603_12840 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D PH603_12845 class III extradiol dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] D PH603_12850 Gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] D PH603_12810 amidohydrolase family protein K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57] D PH603_01155 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:gso00364] D PH603_02285 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:gso00625] D PH603_05755 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D PH603_06955 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:gso00361] D PH603_02285 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:gso00623] D PH603_02285 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:gso00622] D PH603_02970 aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D PH603_12410 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D PH603_05425 tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D PH603_12390 fumarylacetoacetate hydrolase family protein K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D PH603_12405 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D PH603_14965 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D PH603_12395 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D PH603_12400 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:gso00643] D PH603_09010 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D PH603_09005 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D PH603_02740 hypothetical protein K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D PH603_02745 hypothetical protein K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] C 00791 Atrazine degradation C 00930 Caprolactam degradation [PATH:gso00930] D PH603_02500 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D PH603_06930 alpha/beta hydrolase fold domain-containing protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D PH603_01155 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D PH603_03830 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D PH603_12665 P1 family peptidase K19963 nylC; 6-aminohexanoate-oligomer endohydrolase [EC:3.5.1.117] C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:gso00621] D PH603_05425 tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D PH603_12390 fumarylacetoacetate hydrolase family protein K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D PH603_12405 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D PH603_14965 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D PH603_12395 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D PH603_12400 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00626 Naphthalene degradation [PATH:gso00626] D PH603_05755 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D PH603_12840 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] D PH603_12845 class III extradiol dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] C 00365 Furfural degradation C 00984 Steroid degradation D PH603_03620 AMP-binding protein K18687 fadD3; HIP---CoA ligase [EC:6.2.1.41] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:gso03020] D PH603_07630 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D PH603_07635 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PH603_07785 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:gso03010] D PH603_03110 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D PH603_08650 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D PH603_07695 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D PH603_08310 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D PH603_09575 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D PH603_07645 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D PH603_07735 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D PH603_09795 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D PH603_07660 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D PH603_07780 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D PH603_07640 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D PH603_07775 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D PH603_07730 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D PH603_00470 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D PH603_15980 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D PH603_07710 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D PH603_09570 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D PH603_07685 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D PH603_01150 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D PH603_15790 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D PH603_07615 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D PH603_07680 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D PH603_07670 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D PH603_07725 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D PH603_07740 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D PH603_07625 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D PH603_09565 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D PH603_07620 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D PH603_07610 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D PH603_09790 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D PH603_07715 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D PH603_07760 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D PH603_07700 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D PH603_07790 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D PH603_07745 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D PH603_15965 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D PH603_03155 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D PH603_15175 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D PH603_07690 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D PH603_04855 hypothetical protein K02892 RP-L23; large subunit ribosomal protein L23 D PH603_07675 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D PH603_07720 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D PH603_05285 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D PH603_15180 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D PH603_01730 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D PH603_07705 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D PH603_07755 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D PH603_15390 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D PH603_06805 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D PH603_08025 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D PH603_00790 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D PH603_03150 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D PH603_15685 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 C 00970 Aminoacyl-tRNA biosynthesis [PATH:gso00970] D PH603_01690 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PH603_01475 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PH603_11425 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PH603_14495 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PH603_13405 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PH603_07885 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PH603_03650 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D PH603_11745 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PH603_14775 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PH603_09945 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D PH603_10465 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PH603_10695 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PH603_08085 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D PH603_08090 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D PH603_08080 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D PH603_09220 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PH603_09715 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PH603_14735 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D PH603_14730 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D PH603_02685 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PH603_11295 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PH603_10690 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PH603_10015 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PH603_01960 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D PH603_11400 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PH603_02480 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PH603_04450 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PH603_02195 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D PH603_11340 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PH603_08625 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PH603_00055 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PH603_03160 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PH603_03165 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PH603_09530 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PH603_02010 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:gso03060] D PH603_07765 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PH603_07600 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D PH603_10410 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D PH603_11265 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D PH603_11270 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D PH603_00805 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PH603_00135 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PH603_02505 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D PH603_15985 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PH603_16010 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D PH603_11310 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D PH603_11305 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D PH603_11300 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D PH603_02360 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D PH603_04455 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:gso04122] D PH603_09545 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PH603_09550 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PH603_11480 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D PH603_03885 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D PH603_06445 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D PH603_06770 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D PH603_06110 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D PH603_07240 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D PH603_06775 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein D PH603_01190 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D PH603_10450 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D PH603_06105 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] C 03050 Proteasome C 03018 RNA degradation [PATH:gso03018] D PH603_15235 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D PH603_09480 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12] D PH603_10375 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PH603_00465 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D PH603_01775 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D PH603_08470 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D PH603_08035 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D PH603_14555 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D PH603_02315 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D PH603_08610 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D PH603_02365 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D PH603_13805 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PH603_10290 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D PH603_09700 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D PH603_13770 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:gso03030] D PH603_02350 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PH603_08640 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PH603_03980 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PH603_10010 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PH603_02490 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PH603_09640 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D PH603_01140 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PH603_09560 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PH603_05465 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D PH603_09355 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PH603_13925 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D PH603_07000 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D PH603_01500 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D PH603_13700 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:gso03410] D PH603_02650 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PH603_07010 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D PH603_01165 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D PH603_03475 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D PH603_10395 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D PH603_08195 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D PH603_14520 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D PH603_02440 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D PH603_11360 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D PH603_01500 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D PH603_11220 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PH603_13700 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:gso03420] D PH603_11865 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D PH603_09340 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D PH603_11695 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D PH603_06785 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D PH603_13680 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PH603_01500 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D PH603_13700 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:gso03430] D PH603_01995 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D PH603_04465 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D PH603_13680 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PH603_14140 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D PH603_08785 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D PH603_11220 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PH603_09355 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PH603_08640 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PH603_01140 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PH603_03980 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PH603_02490 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PH603_10010 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PH603_02350 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PH603_09640 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D PH603_13700 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PH603_01120 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:gso03440] D PH603_11220 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PH603_09355 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PH603_01135 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D PH603_08245 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D PH603_03995 recR; recombination mediator RecR K06187 recR; recombination protein RecR D PH603_09215 recA; recombinase RecA K03553 recA; recombination protein RecA D PH603_01500 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D PH603_06255 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D PH603_06260 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D PH603_06250 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D PH603_11850 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D PH603_08640 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PH603_01140 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PH603_03980 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PH603_02490 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PH603_10010 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PH603_02350 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PH603_09640 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D PH603_15295 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:gso02010] D PH603_12525 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D PH603_12520 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D PH603_06840 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D PH603_11490 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D PH603_11495 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D PH603_11115 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D PH603_04115 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D PH603_09435 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D PH603_04105 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D PH603_10515 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D PH603_04110 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D PH603_10520 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D PH603_10725 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D PH603_10730 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D PH603_10735 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D PH603_10740 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D PH603_03550 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein D PH603_04985 hypothetical protein K10107 kpsE; capsular polysaccharide transport system permease protein D PH603_04975 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein D PH603_04980 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D PH603_08630 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D PH603_08635 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D PH603_01650 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D PH603_01655 heme ABC transporter permease K02195 ccmC; heme exporter protein C D PH603_01660 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D PH603_01665 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D PH603_06505 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein D PH603_11820 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D PH603_11825 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D PH603_01930 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D PH603_04195 hypothetical protein K09811 ftsX; cell division transport system permease protein D PH603_04200 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D PH603_16180 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D PH603_02660 peptidase domain-containing ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D PH603_02665 ABC transporter transmembrane domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D PH603_05035 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D PH603_11535 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase C 02060 Phosphotransferase system (PTS) [PATH:gso02060] D PH603_00270 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D PH603_00275 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D PH603_00070 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D PH603_01945 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:gso03070] D PH603_11410 TolC family outer membrane protein K12340 tolC; outer membrane protein D PH603_14430 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D PH603_14425 type II secretion system protein N K02452 gspC; general secretion pathway protein C D PH603_14440 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D PH603_14445 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D PH603_14450 prepilin-type N-terminal cleavage/methylation domain-containing protein K02457 gspH; general secretion pathway protein H D PH603_14455 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I D PH603_14460 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J D PH603_14465 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K D PH603_14470 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D PH603_14475 type II secretion system protein M K02462 gspM; general secretion pathway protein M D PH603_14435 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D PH603_11265 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D PH603_07600 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D PH603_10410 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D PH603_07765 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PH603_11270 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D PH603_00805 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PH603_00135 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PH603_16010 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D PH603_02505 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D PH603_15985 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PH603_11310 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D PH603_11305 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D PH603_11300 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:gso02020] D PH603_10720 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D PH603_10750 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D PH603_11055 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PH603_10725 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D PH603_13560 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D PH603_15550 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D PH603_12760 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D PH603_12765 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein D PH603_03785 flagellin K02406 fliC; flagellin D PH603_05485 hypothetical protein K02406 fliC; flagellin D PH603_05490 flagellin K02406 fliC; flagellin D PH603_10895 flagellin K02406 fliC; flagellin D PH603_11005 flagellin K02406 fliC; flagellin D PH603_11010 flagellin K02406 fliC; flagellin D PH603_11015 flagellin K02406 fliC; flagellin D PH603_14125 flagellin K02406 fliC; flagellin D PH603_06400 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D PH603_09840 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D PH603_09770 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D PH603_01145 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D PH603_00290 stimulus-sensing domain-containing protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D PH603_00295 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI D PH603_03455 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PH603_12265 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PH603_15935 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D PH603_07255 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D PH603_07260 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D PH603_07270 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D PH603_07265 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D PH603_12120 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D PH603_14655 serine hydrolase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D PH603_00120 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D PH603_04700 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D PH603_04690 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D PH603_04685 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D PH603_04675 cellulose synthase operon protein YhjQ/BcsQ K02282 cpaE; pilus assembly protein CpaE D PH603_04670 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D PH603_04665 type II secretion system F family protein K12510 tadB; tight adherence protein B D PH603_04660 type II secretion system F family protein K12511 tadC; tight adherence protein C D PH603_02000 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D PH603_08445 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D PH603_10170 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D PH603_10315 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D PH603_10310 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D PH603_02965 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_08440 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_11175 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_11195 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_14910 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_10305 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D PH603_10300 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D PH603_03835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_08915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_09375 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_01935 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D PH603_06335 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D PH603_00750 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D PH603_01840 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PH603_03015 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PH603_03440 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PH603_04790 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PH603_06480 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PH603_09920 HAMP domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PH603_06320 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D PH603_06315 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PH603_04425 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PH603_06325 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PH603_06330 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D PH603_04440 HAMP domain-containing sensor histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D PH603_11205 HAMP domain-containing sensor histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D PH603_15940 HAMP domain-containing sensor histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D PH603_08020 PleD family two-component system response regulator K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D PH603_08015 response regulator K11443 divK; two-component system, cell cycle response regulator DivK D PH603_09205 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D PH603_06310 histidine phosphotransferase family protein K13588 chpT; histidine phosphotransferase ChpT D PH603_06345 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA D PH603_00825 Hpt domain-containing protein K10911 luxU; two-component system, phosphorelay protein LuxU D PH603_00625 ActS/PrrB/RegB family redox-sensitive histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D PH603_00630 ActR/PrrA/RegA family redox response regulator transcription factor K15012 regA; two-component system, response regulator RegA D PH603_13745 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D PH603_13740 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D PH603_13735 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D PH603_01210 cytochrome c family protein K08738 CYC; cytochrome c D PH603_11110 cytochrome c family protein K08738 CYC; cytochrome c D PH603_16060 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D PH603_16055 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D PH603_16050 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D PH603_16045 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D PH603_01035 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D PH603_01040 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D PH603_11410 TolC family outer membrane protein K12340 tolC; outer membrane protein D PH603_11545 SLBB domain-containing protein K01991 wza; polysaccharide biosynthesis/export protein D PH603_12640 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D PH603_11730 FecR domain-containing protein K07165 fecR; transmembrane sensor D PH603_06170 ATP-binding protein K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:gso04148] D PH603_03585 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D PH603_15240 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D PH603_13745 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:gso02024] D PH603_00825 Hpt domain-containing protein K10911 luxU; two-component system, phosphorelay protein LuxU D PH603_10290 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D PH603_10425 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D PH603_10435 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D PH603_10710 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D PH603_06220 autoinducer binding domain-containing protein K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1 D PH603_00215 acyl-homoserine-lactone synthase K22955 traI; acyl homoserine lactone synthase [EC:2.3.1.184] D PH603_02720 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PH603_07455 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PH603_08940 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PH603_13475 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D PH603_02450 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D PH603_10640 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D PH603_00805 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PH603_07600 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D PH603_10410 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D PH603_07765 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PH603_11270 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D PH603_00135 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PH603_16010 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D PH603_02505 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D PH603_15985 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:gso02030] D PH603_00750 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D PH603_01840 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PH603_03015 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PH603_03440 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PH603_04790 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PH603_06480 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PH603_09920 HAMP domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PH603_06315 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PH603_06320 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D PH603_04425 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PH603_06325 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PH603_06330 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D PH603_06335 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D PH603_06415 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D PH603_10830 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D PH603_06405 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D PH603_07880 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D PH603_06400 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D PH603_09840 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D PH603_08285 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D PH603_10805 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D PH603_15405 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:gso02040] D PH603_09185 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D PH603_06420 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF D PH603_06415 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D PH603_06410 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH D PH603_06350 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D PH603_06355 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D PH603_10610 hypothetical protein K02415 fliL; flagellar protein FliL D PH603_10835 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D PH603_10830 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D PH603_06405 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D PH603_07880 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D PH603_09165 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D PH603_09160 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D PH603_09190 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D PH603_09195 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D PH603_06390 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D PH603_09200 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D PH603_09175 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D PH603_09180 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D PH603_06435 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD D PH603_06430 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE D PH603_10840 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF D PH603_10845 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D PH603_10855 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D PH603_10880 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D PH603_10885 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ D PH603_11915 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D PH603_11910 flagellin K02397 flgL; flagellar hook-associated protein 3 FlgL D PH603_03785 flagellin K02406 fliC; flagellin D PH603_05485 hypothetical protein K02406 fliC; flagellin D PH603_05490 flagellin K02406 fliC; flagellin D PH603_10895 flagellin K02406 fliC; flagellin D PH603_11005 flagellin K02406 fliC; flagellin D PH603_11010 flagellin K02406 fliC; flagellin D PH603_11015 flagellin K02406 fliC; flagellin D PH603_14125 flagellin K02406 fliC; flagellin D PH603_06400 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D PH603_09840 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D PH603_08285 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D PH603_10805 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D PH603_15405 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB D PH603_03550 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein D PH603_05475 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D PH603_01935 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D PH603_10375 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:gso04980] D PH603_04255 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D PH603_10545 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-] D PH603_10550 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D PH603_10555 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D PH603_07140 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:gso01501] D PH603_02610 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D PH603_11330 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D PH603_14655 serine hydrolase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D PH603_08950 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D PH603_05520 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PH603_09090 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PH603_05525 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D PH603_09095 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D PH603_11410 TolC family outer membrane protein K12340 tolC; outer membrane protein D PH603_00595 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PH603_09490 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PH603_13485 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D PH603_06695 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:gso01502] D PH603_03455 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PH603_12265 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PH603_02050 hypothetical protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PH603_02060 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D PH603_06705 Mur ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D PH603_06710 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D PH603_06725 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:gso01503] D PH603_11520 M10 family metallopeptidase C-terminal domain-containing protein K01406 prtC; serralysin [EC:3.4.24.40] D PH603_09485 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PH603_13560 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D PH603_05520 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PH603_09090 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PH603_05525 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D PH603_09095 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D PH603_11410 TolC family outer membrane protein K12340 tolC; outer membrane protein B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:gso01000] C 01001 Protein kinases [BR:gso01001] D PH603_12635 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D PH603_11555 polysaccharide biosynthesis tyrosine autokinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D PH603_10720 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D PH603_00290 stimulus-sensing domain-containing protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D PH603_10315 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D PH603_10305 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D PH603_06315 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PH603_04440 HAMP domain-containing sensor histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D PH603_11205 HAMP domain-containing sensor histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D PH603_15940 HAMP domain-containing sensor histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D PH603_09205 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D PH603_00625 ActS/PrrB/RegB family redox-sensitive histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D PH603_06170 ATP-binding protein K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:gso01009] D PH603_00260 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D PH603_03780 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D PH603_13545 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:gso01002] D PH603_04455 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D PH603_14410 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D PH603_04695 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D PH603_09720 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D PH603_11190 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase D PH603_10535 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D PH603_01795 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D PH603_05130 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PH603_16165 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D PH603_15065 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D PH603_02500 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103] D PH603_01560 sortase K07284 srtA; sortase A [EC:3.4.22.70] D PH603_05300 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D PH603_10765 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D PH603_00975 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D PH603_11500 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D PH603_11520 M10 family metallopeptidase C-terminal domain-containing protein K01406 prtC; serralysin [EC:3.4.24.40] D PH603_08180 M13 family peptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D PH603_03455 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PH603_12265 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PH603_05175 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D PH603_01230 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D PH603_09635 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D PH603_05965 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D PH603_14300 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D PH603_05205 hydrolase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D PH603_04055 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D PH603_16125 M20/M25/M40 family metallo-hydrolase K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-] D PH603_14220 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B D PH603_15085 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] D PH603_13270 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D PH603_14750 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D PH603_03445 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D PH603_14680 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D PH603_02875 htpX; zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D PH603_08685 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D PH603_13560 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D PH603_04545 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D PH603_09130 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D PH603_03450 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D PH603_10000 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PH603_08480 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D PH603_08490 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D PH603_10455 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D PH603_02360 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D PH603_04080 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D PH603_07085 alpha/beta hydrolase K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-] D PH603_15225 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D PH603_08290 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11] D PH603_14375 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D PH603_05665 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D PH603_04845 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease D PH603_02570 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D PH603_08955 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D PH603_06555 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PH603_14180 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D PH603_07225 U32 family peptidase K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV D PH603_07220 U32 family peptidase K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU D PH603_14880 TldD/PmbA family protein K03592 pmbA; PmbA protein D PH603_14040 tldD; metalloprotease TldD K03568 tldD; TldD protein D PH603_13570 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D PH603_13575 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:gso01003] D PH603_03535 glycosyltransferase family 2 protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D PH603_04815 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] D PH603_00595 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PH603_09490 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PH603_12655 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01005 Lipopolysaccharide biosynthesis proteins [BR:gso01005] D PH603_13820 lipid A deacylase LpxR family protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D PH603_04930 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D PH603_04940 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D PH603_04935 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D PH603_04970 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D PH603_12655 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:gso01011] D PH603_03700 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D PH603_06735 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D PH603_06730 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D PH603_06715 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D PH603_06700 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D PH603_02050 hypothetical protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D PH603_15605 aspartate/glutamate racemase family protein K01776 murI; glutamate racemase [EC:5.1.1.3] D PH603_05665 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D PH603_06710 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D PH603_06725 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D PH603_01805 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D PH603_02005 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D PH603_00595 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PH603_09490 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D PH603_13485 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D PH603_06695 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D PH603_10000 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D PH603_03455 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PH603_12265 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PH603_01560 sortase K07284 srtA; sortase A [EC:3.4.22.70] D PH603_02520 MltA domain-containing protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D PH603_09990 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D PH603_09600 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D PH603_09995 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D PH603_09485 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:gso01004] D PH603_09580 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D PH603_09595 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D PH603_09585 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D PH603_10475 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D PH603_08830 SDR family oxidoreductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D PH603_00075 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D PH603_03935 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D PH603_08885 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D PH603_13455 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D PH603_03180 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PH603_12755 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D PH603_12865 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D PH603_02720 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PH603_07455 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PH603_08940 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PH603_11785 fatty acyl-AMP ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D PH603_12745 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D PH603_10585 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D PH603_08050 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D PH603_00865 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:gso01006] D PH603_08790 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D PH603_14770 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D PH603_08670 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D PH603_09860 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D PH603_13540 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D PH603_14100 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D PH603_14025 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:gso01007] D PH603_02195 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D PH603_10465 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PH603_10695 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PH603_04265 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D PH603_09530 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PH603_02010 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PH603_10690 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PH603_11340 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PH603_10015 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PH603_04450 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PH603_11400 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PH603_02480 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PH603_09715 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PH603_00055 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PH603_14735 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D PH603_14730 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D PH603_11295 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PH603_08625 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PH603_02685 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PH603_09220 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PH603_03160 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PH603_03165 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PH603_11705 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D PH603_11235 LL-diaminopimelate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D PH603_04175 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D PH603_10670 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D PH603_03900 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D PH603_11800 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D PH603_11155 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D PH603_03340 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D PH603_02750 acetyl ornithine aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PH603_16330 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D PH603_06360 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D PH603_12695 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D PH603_03910 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D PH603_16275 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D PH603_13720 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D PH603_04355 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D PH603_14635 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 [BR:gso00199] C 00194 Photosynthesis proteins [BR:gso00194] D PH603_15255 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D PH603_15260 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D PH603_15265 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D PH603_15270 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D PH603_15275 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D PH603_07050 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D PH603_07055 ATP F0F1 synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D PH603_07045 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D PH603_07040 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D PH603_07035 AtpZ/AtpI family protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:gso03000] D PH603_03645 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PH603_14800 ada; bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D PH603_04505 gcvA; transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PH603_05460 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PH603_10220 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D PH603_04655 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D PH603_13890 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D PH603_12825 LysR family transcriptional regulator K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway D PH603_05925 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PH603_06055 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PH603_06065 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PH603_12230 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PH603_13135 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PH603_14935 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PH603_16240 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PH603_16325 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D PH603_05545 LacI family DNA-binding transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D PH603_13115 LacI family DNA-binding transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D PH603_14840 UTRA domain-containing protein K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D PH603_16160 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D PH603_00345 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D PH603_12900 GntR family transcriptional regulator K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator D PH603_09045 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D PH603_06665 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D PH603_16455 TetR/AcrR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D PH603_05820 CerR family C-terminal domain-containing protein K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D PH603_00325 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PH603_05680 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PH603_14780 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PH603_10770 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D PH603_15150 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D PH603_06220 autoinducer binding domain-containing protein K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1 D PH603_00210 LuxR C-terminal-related transcriptional regulator K21697 vjbR; LuxR family transcriptional regulator, quorum-sensing system regulator VjbR D PH603_01910 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D PH603_13365 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D PH603_03960 MerR family transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D PH603_00550 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D PH603_13475 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D PH603_02730 IclR family transcriptional regulator C-terminal domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D PH603_12025 IclR family transcriptional regulator C-terminal domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D PH603_05990 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D PH603_08755 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D PH603_11940 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D PH603_15705 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D PH603_01015 short-chain fatty acyl-CoA regulator family protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D PH603_08600 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D PH603_13425 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D PH603_09415 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D PH603_14785 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D PH603_01750 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D PH603_02245 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PH603_01710 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D PH603_02205 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D PH603_11120 ACT domain-containing protein K03567 gcvR; glycine cleavage system transcriptional repressor D PH603_00395 pspF; phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator D PH603_00375 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D PH603_12690 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator D PH603_13980 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D PH603_10870 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D PH603_10645 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D PH603_06680 hypothetical protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:gso03021] D PH603_07785 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PH603_07630 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D PH603_07635 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PH603_05475 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D PH603_00820 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D PH603_02110 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D PH603_02130 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D PH603_14605 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D PH603_01935 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D PH603_00495 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D PH603_10620 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D PH603_07605 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D PH603_10870 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D PH603_05415 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D PH603_02315 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:gso03019] D PH603_09480 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12] D PH603_03660 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-] D PH603_08235 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D PH603_08610 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D PH603_08035 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D PH603_01775 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D PH603_08470 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D PH603_14555 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D PH603_10375 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PH603_00465 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D PH603_02315 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D PH603_02365 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D PH603_13805 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PH603_10290 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D PH603_09700 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D PH603_13770 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D PH603_15235 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D PH603_04160 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A D PH603_00280 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ D PH603_14245 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:gso03011] D PH603_03110 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D PH603_08650 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D PH603_07695 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D PH603_08310 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D PH603_09575 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D PH603_07645 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D PH603_07735 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D PH603_09795 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D PH603_07660 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D PH603_07780 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D PH603_07640 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D PH603_07775 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D PH603_07730 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D PH603_00470 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D PH603_15980 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D PH603_07710 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D PH603_09570 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D PH603_07685 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D PH603_01150 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D PH603_15790 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D PH603_07615 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D PH603_07680 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D PH603_07670 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D PH603_07725 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D PH603_07740 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D PH603_09565 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D PH603_07620 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D PH603_07610 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D PH603_07625 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D PH603_09790 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D PH603_07715 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D PH603_07760 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D PH603_07700 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D PH603_07790 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D PH603_07745 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D PH603_15965 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D PH603_03155 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D PH603_15175 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D PH603_07690 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D PH603_04855 hypothetical protein K02892 RP-L23; large subunit ribosomal protein L23 D PH603_07675 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D PH603_07720 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D PH603_15180 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D PH603_01730 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D PH603_07705 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D PH603_07755 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D PH603_15390 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D PH603_06805 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D PH603_08025 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D PH603_00790 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D PH603_03150 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D PH603_15685 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D PH603_05285 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 C 03009 Ribosome biogenesis [BR:gso03009] D PH603_08235 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D PH603_08240 era; GTPase Era K03595 era; GTPase D PH603_15185 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D PH603_10870 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D PH603_00495 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D PH603_10620 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D PH603_07605 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D PH603_09615 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D PH603_02620 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D PH603_09305 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D PH603_04470 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D PH603_14105 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D PH603_02255 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D PH603_06685 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D PH603_02230 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D PH603_08800 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D PH603_07575 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D PH603_09295 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D PH603_15210 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D PH603_06885 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D PH603_14045 rlmJ; 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D PH603_01580 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D PH603_08805 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D PH603_10705 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D PH603_04475 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D PH603_07820 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D PH603_14600 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D PH603_11935 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D PH603_00565 GNAT family N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D PH603_15975 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D PH603_16070 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D PH603_13685 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D PH603_09480 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12] D PH603_03660 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-] D PH603_08065 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D PH603_13385 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D PH603_09745 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D PH603_10285 hflX; GTPase HflX K03665 hflX; GTPase D PH603_08770 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D PH603_08215 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D PH603_00480 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D PH603_00500 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D PH603_15205 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D PH603_00530 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D PH603_01940 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D PH603_05275 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:gso03016] D PH603_15015 MBL fold metallo-hydrolase K00784 rnz; ribonuclease Z [EC:3.1.26.11] D PH603_10465 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PH603_10695 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PH603_08625 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D PH603_04450 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D PH603_02480 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PH603_10015 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D PH603_11340 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PH603_09715 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PH603_09220 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D PH603_02685 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D PH603_11295 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D PH603_10690 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D PH603_11400 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D PH603_00055 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D PH603_03160 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D PH603_03165 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D PH603_09530 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PH603_02010 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D PH603_02580 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D PH603_00510 tRNA (guanine(46)-N(7))-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D PH603_01955 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D PH603_00475 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D PH603_09545 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PH603_09550 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PH603_08770 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D PH603_13540 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D PH603_02270 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D PH603_02260 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D PH603_03610 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D PH603_06305 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D PH603_00795 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D PH603_02210 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D PH603_01915 ribonuclease H-like domain-containing protein K03684 rnd; ribonuclease D [EC:3.1.13.5] D PH603_09710 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D PH603_03940 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D PH603_02195 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D PH603_14735 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D PH603_14730 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D PH603_04265 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D PH603_01080 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D PH603_00980 YbaK/EbsC family protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D PH603_02855 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D PH603_04480 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D PH603_10320 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D PH603_00540 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D PH603_16005 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D PH603_10685 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D PH603_09315 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D PH603_15970 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D PH603_13750 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D PH603_14915 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D PH603_10705 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D PH603_06445 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D PH603_03885 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D PH603_03275 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D PH603_14710 hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ D PH603_08740 mnmC; FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D PH603_09970 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D PH603_11455 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D PH603_11460 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D PH603_11470 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D PH603_01785 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D PH603_03615 mnmH; tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D PH603_09975 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D PH603_14685 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D PH603_00570 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D PH603_03235 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D PH603_00245 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D PH603_08035 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D PH603_00465 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:gso03012] D PH603_00485 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D PH603_02690 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D PH603_00755 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D PH603_09665 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D PH603_08655 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D PH603_07590 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D PH603_07655 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D PH603_07650 fusA; elongation factor G K02355 fusA; elongation factor G D PH603_08735 elongation factor G K02355 fusA; elongation factor G D PH603_00050 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D PH603_08665 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D PH603_00045 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D PH603_05280 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D PH603_03670 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D PH603_15435 efp; elongation factor P K02356 efp; elongation factor P D PH603_09495 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D PH603_09140 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D PH603_13885 arfB; alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:gso03110] D PH603_07975 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D PH603_00035 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D PH603_08485 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D PH603_02575 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D PH603_03780 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D PH603_02365 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D PH603_13805 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PH603_02370 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D PH603_06635 DnaJ family molecular chaperone K05801 djlA; DnaJ like chaperone protein D PH603_03350 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D PH603_02200 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D PH603_15385 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA D PH603_01720 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D PH603_13810 groES; co-chaperone GroES K04078 groES; chaperonin GroES D PH603_13560 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D PH603_14680 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D PH603_07040 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D PH603_02505 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D PH603_04075 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D PH603_16210 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D PH603_10420 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D PH603_00835 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D PH603_09625 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D PH603_00225 trxA; thioredoxin K03671 TXN; thioredoxin D PH603_07400 trxC; thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D PH603_02860 co-chaperone YbbN K05838 ybbN; putative thioredoxin D PH603_00100 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3 D PH603_08350 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D PH603_01635 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:gso04131] D PH603_09670 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D PH603_11365 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D PH603_15480 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PH603_15670 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PH603_03780 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:gso03051] D PH603_03780 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:gso03032] D PH603_13925 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D PH603_03645 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PH603_08495 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PH603_10580 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D PH603_03115 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D PH603_01145 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D PH603_09560 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D PH603_05465 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D PH603_09355 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PH603_08640 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PH603_01140 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PH603_09640 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D PH603_02490 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PH603_10010 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PH603_02350 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PH603_03980 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PH603_07000 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D PH603_01500 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D PH603_13700 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PH603_01120 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PH603_09950 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D PH603_01130 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D PH603_08250 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D PH603_10495 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D PH603_08040 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:gso03036] D PH603_03645 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PH603_08235 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D PH603_08495 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PH603_10580 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D PH603_03115 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D PH603_01145 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D PH603_11135 hspQ; heat shock protein HspQ K11940 hspQ; heat shock protein HspQ D PH603_11475 hspQ; heat shock protein HspQ K11940 hspQ; heat shock protein HspQ D PH603_11715 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D PH603_10290 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D PH603_13890 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D PH603_00325 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PH603_05680 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PH603_14780 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D PH603_07030 AAA family ATPase K03529 smc; chromosome segregation protein D PH603_11320 ScpA family protein K05896 scpA; segregation and condensation protein A D PH603_11315 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D PH603_06745 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D PH603_04200 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D PH603_06695 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D PH603_02425 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D PH603_06690 hypothetical protein K03586 ftsL; cell division protein FtsL D PH603_06740 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ D PH603_06720 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D PH603_04195 hypothetical protein K09811 ftsX; cell division transport system permease protein D PH603_06750 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D PH603_15495 cell division protein ZapA K09888 zapA; cell division protein ZapA D PH603_15880 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE D PH603_09485 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PH603_05520 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PH603_09090 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PH603_13500 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D PH603_13495 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D PH603_13480 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D PH603_02250 AAA family ATPase K03496 parA; chromosome partitioning protein D PH603_07955 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein D PH603_02245 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D PH603_08250 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D PH603_10495 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D PH603_02260 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D PH603_02255 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D PH603_09315 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D PH603_15800 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D PH603_00180 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D PH603_13580 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D PH603_00810 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:gso03400] D PH603_02280 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D PH603_15815 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D PH603_06855 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D PH603_07010 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D PH603_02650 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D PH603_15310 S1/P1 nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1] D PH603_00115 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D PH603_14210 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D PH603_01185 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D PH603_14800 ada; bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D PH603_14790 alkB; DNA oxidative demethylase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D PH603_08195 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D PH603_14520 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D PH603_03475 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D PH603_10395 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D PH603_01165 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D PH603_02440 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D PH603_11360 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D PH603_11220 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D PH603_13700 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D PH603_01500 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D PH603_09340 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D PH603_11695 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D PH603_06785 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D PH603_13680 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D PH603_07630 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D PH603_07635 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D PH603_07785 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D PH603_11865 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D PH603_01995 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D PH603_04465 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D PH603_14140 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D PH603_08785 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D PH603_08640 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D PH603_01140 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D PH603_09640 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D PH603_02490 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D PH603_10010 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D PH603_02350 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D PH603_03980 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D PH603_09355 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PH603_01120 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PH603_09215 recA; recombinase RecA K03553 recA; recombination protein RecA D PH603_06255 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D PH603_06260 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D PH603_06250 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D PH603_15295 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D PH603_10525 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D PH603_01135 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D PH603_11850 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D PH603_08245 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D PH603_03995 recR; recombination mediator RecR K06187 recR; recombination protein RecR D PH603_13705 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D PH603_00230 addA; double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D PH603_00235 addB; double-strand break repair protein AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D PH603_09950 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D PH603_01130 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D PH603_08040 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D PH603_08495 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D PH603_10580 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D PH603_03115 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D PH603_14555 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D PH603_01425 hypothetical protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D PH603_08000 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D PH603_10455 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D PH603_02820 hypothetical protein K14160 imuA; protein ImuA D PH603_02825 DNA polymerase Y family protein K14161 imuB; protein ImuB D PH603_02830 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D PH603_11775 RecX family transcriptional regulator K03565 recX; regulatory protein D PH603_02190 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D PH603_00165 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PH603_09425 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D PH603_00160 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:gso03029] D PH603_13740 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D PH603_00485 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D PH603_02690 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D PH603_08655 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D PH603_07590 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D PH603_07655 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D PH603_07650 fusA; elongation factor G K02355 fusA; elongation factor G D PH603_08735 elongation factor G K02355 fusA; elongation factor G D PH603_10595 ubiquinol-cytochrome C chaperone family protein K17662 CBP3; cytochrome b pre-mRNA-processing protein 3 D PH603_01725 helicase-related protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6] D PH603_08240 era; GTPase Era K03595 era; GTPase D PH603_09530 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D PH603_02480 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D PH603_09715 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D PH603_11340 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D PH603_08085 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D PH603_08090 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D PH603_08080 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D PH603_09355 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D PH603_08690 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D PH603_02365 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D PH603_02200 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D PH603_13805 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PH603_13810 groES; co-chaperone GroES K04078 groES; chaperonin GroES D PH603_02370 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D PH603_09545 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PH603_09550 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PH603_08350 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D PH603_13580 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D PH603_14025 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D PH603_14015 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D PH603_09770 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D PH603_00805 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PH603_14000 hypothetical protein K14998 SURF1; surfeit locus 1 family protein D PH603_00610 SCO family protein K07152 SCO1; protein SCO1 D PH603_03780 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:gso02000] D PH603_16180 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D PH603_15395 ABC transporter transmembrane domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D PH603_02660 peptidase domain-containing ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D PH603_02665 ABC transporter transmembrane domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D PH603_05035 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D PH603_11535 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D PH603_06230 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D PH603_06840 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D PH603_11490 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D PH603_11495 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D PH603_12525 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D PH603_12520 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D PH603_09750 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D PH603_12350 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D PH603_09760 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D PH603_12340 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D PH603_09755 ATP-binding cassette domain-containing protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D PH603_12335 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D PH603_04115 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D PH603_09435 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D PH603_04105 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D PH603_10515 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D PH603_04110 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D PH603_10520 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D PH603_04120 ABC-type transport auxiliary lipoprotein family protein K18480 linN; cholesterol transport system auxiliary component D PH603_11115 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D PH603_10725 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D PH603_10730 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D PH603_10735 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D PH603_10740 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D PH603_03550 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein D PH603_03075 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D PH603_03625 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D PH603_05290 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D PH603_06870 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D PH603_09020 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D PH603_14050 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D PH603_15420 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D PH603_15890 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D PH603_13355 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D PH603_16090 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D PH603_13350 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D PH603_13345 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D PH603_04975 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein D PH603_04985 hypothetical protein K10107 kpsE; capsular polysaccharide transport system permease protein D PH603_04980 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D PH603_06505 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein D PH603_11820 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D PH603_11825 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D PH603_01930 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D PH603_03765 ABC transporter permease subunit K25151 gldF; gliding motility-associated transport system permease protein D PH603_03760 ABC transporter ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D PH603_03770 Gldg family protein K25153 gldG; gliding motility-associatede transport system auxiliary component D PH603_08630 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D PH603_08635 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D PH603_01650 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D PH603_01655 heme ABC transporter permease K02195 ccmC; heme exporter protein C D PH603_01660 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D PH603_01665 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D PH603_04195 hypothetical protein K09811 ftsX; cell division transport system permease protein D PH603_04200 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D PH603_03335 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D PH603_05805 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D PH603_07560 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D PH603_01490 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PH603_05810 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PH603_07555 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D PH603_00725 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D PH603_03925 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D PH603_06895 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D PH603_06900 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D PH603_15715 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D PH603_15720 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D PH603_15725 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D PH603_15730 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D PH603_00720 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PH603_03930 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PH603_06905 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PH603_15735 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D PH603_03295 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D PH603_15995 SLC13 family permease K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D PH603_03495 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D PH603_02140 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D PH603_15785 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D PH603_05930 sugar porter family MFS transporter K08139 HXT; MFS transporter, SP family, sugar:H+ symporter D PH603_12215 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D PH603_12455 MFS transporter K26744 vanK; MFS transporter, AAHS family, vanillate permease D PH603_12880 MFS transporter K26744 vanK; MFS transporter, AAHS family, vanillate permease D PH603_12120 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D PH603_07250 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D PH603_02610 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D PH603_07895 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D PH603_00070 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D PH603_00270 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D PH603_00275 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D PH603_01945 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D PH603_09890 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family D PH603_00875 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PH603_00985 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PH603_01790 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PH603_04235 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PH603_09030 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PH603_09905 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PH603_12300 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PH603_14565 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PH603_15425 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D PH603_01565 marine proteobacterial sortase target protein K07114 yfbK; Ca-activated chloride channel homolog D PH603_09060 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D PH603_02725 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D PH603_13450 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein D PH603_07925 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D PH603_06400 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D PH603_09840 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D PH603_08285 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D PH603_10805 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D PH603_15405 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB D PH603_04335 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D PH603_04340 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D PH603_04325 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D PH603_04330 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D PH603_06270 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D PH603_06275 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D PH603_13295 CorA family divalent cation transporter K16074 zntB; zinc transporter D PH603_07815 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D PH603_10115 mercuric transporter MerT family protein K08363 merT; mercuric ion transport protein D PH603_10120 cation transporter K08364 merP; periplasmic mercuric ion binding protein D PH603_00205 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D PH603_13835 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D PH603_13505 porin family protein K16079 omp31; outer membrane immunogenic protein D PH603_13510 porin family protein K16079 omp31; outer membrane immunogenic protein D PH603_09910 porin K07221 oprO_P; phosphate-selective porin OprO and OprP D PH603_13795 porin K07221 oprO_P; phosphate-selective porin OprO and OprP D PH603_11430 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D PH603_13875 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor D PH603_08170 TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein D PH603_16100 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D PH603_15635 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D PH603_16395 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D PH603_01320 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D PH603_13830 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D PH603_00675 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D PH603_00695 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_03000 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_05595 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_06000 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_06485 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_07365 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_07470 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_09120 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_09655 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_11160 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_11980 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_12040 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_12075 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_12090 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_12220 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_12685 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_12740 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_12890 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_12945 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_13815 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_13905 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_15060 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_15610 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_16230 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D PH603_11410 TolC family outer membrane protein K12340 tolC; outer membrane protein D PH603_05855 efflux transporter outer membrane subunit K18300 oprN; outer membrane protein, multidrug efflux system D PH603_11545 SLBB domain-containing protein K01991 wza; polysaccharide biosynthesis/export protein D PH603_12640 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D PH603_08690 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D PH603_13710 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D PH603_05895 autotransporter assembly complex protein TamA K07278 tamA; translocation and assembly module TamA D PH603_01925 LptA/OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA D PH603_00525 hemolysin family protein K06189 corC; hemolysin (HlyC) family protein D PH603_07060 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF D PH603_10165 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D PH603_15120 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D PH603_12765 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein D PH603_05525 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D PH603_09095 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D PH603_09265 efflux RND transporter permease subunit K18989 vexF; multidrug efflux pump D PH603_05740 multidrug efflux SMR transporter K03297 emrE; small multidrug resistance pump D PH603_09930 SMR family transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE D PH603_10135 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein D PH603_16360 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D PH603_16315 cation acetate symporter K14393 actP; cation/acetate symporter D PH603_01680 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D PH603_11760 nhaB; sodium/proton antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family D PH603_02765 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D PH603_05675 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump D PH603_06085 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump D PH603_14150 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter D PH603_00145 monovalent cation:proton antiporter-2 (CPA2) family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D PH603_01075 monovalent cation:proton antiporter-2 (CPA2) family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D PH603_03270 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D PH603_10295 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D PH603_06945 hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease D PH603_13675 chloride channel protein K03281 clcA; chloride channel protein, CIC family D PH603_09150 chrA; chromate efflux transporter K07240 chrA; chromate transporter D PH603_06130 sulP; sulfate permease K03321 TC.SULP; sulfate permease, SulP family D PH603_08710 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D PH603_16370 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D PH603_07345 TRAP transporter large permease K21393 yiaN; TRAP-type transport system large permease protein D PH603_07340 dctP; TRAP transporter substrate-binding protein DctP K21395 yiaO; TRAP-type transport system periplasmic protein D PH603_16380 Na/Pi symporter K03324 yjbB; phosphate:Na+ symporter D PH603_01870 DUF4040 domain-containing protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D PH603_01865 cation:proton antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D PH603_01845 Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D PH603_01860 monovalent cation/H+ antiporter subunit D family protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D PH603_01885 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D PH603_01880 monovalent cation/H+ antiporter complex subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D PH603_01875 mnhG; monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D PH603_02005 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D PH603_01550 AEC family transporter K13936 mdcF; malonate transporter and related proteins D PH603_13895 LysE/ArgO family amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D PH603_06720 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D PH603_11365 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D PH603_10180 cytochrome c/FTR1 family iron permease K07243 FTR; high-affinity iron transporter D PH603_04310 energy transducer TonB K03832 tonB; periplasmic protein TonB D PH603_04320 TonB family protein K03832 tonB; periplasmic protein TonB D PH603_14695 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D PH603_06285 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D PH603_10605 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D PH603_07255 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D PH603_07260 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D PH603_07270 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D PH603_07900 efflux RND transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system D PH603_05040 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system D PH603_11530 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system D PH603_10160 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D PH603_15125 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D PH603_12760 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D PH603_02655 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D PH603_05970 efflux RND transporter periplasmic adaptor subunit K18298 mexE; membrane fusion protein, multidrug efflux system D PH603_05520 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PH603_09090 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PH603_09270 efflux RND transporter periplasmic adaptor subunit K18990 vexE; membrane fusion protein, multidrug efflux system D PH603_05845 efflux RND transporter periplasmic adaptor subunit K19586 oqxA; membrane fusion protein, multidrug efflux system D PH603_15550 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D PH603_12635 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D PH603_11555 polysaccharide biosynthesis tyrosine autokinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D PH603_11550 Wzz/FepE/Etk N-terminal domain-containing protein K25590 epsF; protein tyrosine kinase modulator D PH603_14290 FeoA family protein K04758 feoA; ferrous iron transport protein A D PH603_14295 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B D PH603_08185 entericidin A/B family lipoprotein K16348 ecnB; entericidin B D PH603_08190 entericidin A/B family lipoprotein K16348 ecnB; entericidin B D PH603_01640 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF D PH603_00410 MipA/OmpV family protein K07274 mipA; MipA family protein D PH603_03490 MipA/OmpV family protein K07274 mipA; MipA family protein D PH603_05535 MipA/OmpV family protein K07274 mipA; MipA family protein C 02044 Secretion system [BR:gso02044] D PH603_11410 TolC family outer membrane protein K12340 tolC; outer membrane protein D PH603_05035 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D PH603_11535 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D PH603_05040 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system D PH603_11530 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system D PH603_02660 peptidase domain-containing ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D PH603_02665 ABC transporter transmembrane domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D PH603_02655 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D PH603_14425 type II secretion system protein N K02452 gspC; general secretion pathway protein C D PH603_14430 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D PH603_14435 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D PH603_14440 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D PH603_14445 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D PH603_14450 prepilin-type N-terminal cleavage/methylation domain-containing protein K02457 gspH; general secretion pathway protein H D PH603_14455 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I D PH603_14460 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J D PH603_14465 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K D PH603_14470 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D PH603_14475 type II secretion system protein M K02462 gspM; general secretion pathway protein M D PH603_14480 gspN; type II secretion system protein N K02463 gspN; general secretion pathway protein N D PH603_14410 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D PH603_04695 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D PH603_04690 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D PH603_04685 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D PH603_04675 cellulose synthase operon protein YhjQ/BcsQ K02282 cpaE; pilus assembly protein CpaE D PH603_04670 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D PH603_04665 type II secretion system F family protein K12510 tadB; tight adherence protein B D PH603_04660 type II secretion system F family protein K12511 tadC; tight adherence protein C D PH603_00120 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D PH603_04700 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D PH603_01525 YggT family protein K02221 yggT; YggT family protein D PH603_06390 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D PH603_09200 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D PH603_09170 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein D PH603_06420 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF D PH603_06410 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH D PH603_06350 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D PH603_06405 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D PH603_07880 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D PH603_09165 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D PH603_09160 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D PH603_09190 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D PH603_09195 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D PH603_00135 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D PH603_02505 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D PH603_11265 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D PH603_07600 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D PH603_10410 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D PH603_07765 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D PH603_15985 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D PH603_16010 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D PH603_11270 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D PH603_00805 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D PH603_11310 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D PH603_11305 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D PH603_11300 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:gso02042] D PH603_00205 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D PH603_13835 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D PH603_06890 hemolysin III family protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:gso02022] D PH603_10720 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D PH603_10750 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D PH603_00290 stimulus-sensing domain-containing protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D PH603_00295 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI D PH603_01895 response regulator K02483 K02483; two-component system, OmpR family, response regulator D PH603_05880 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D PH603_06540 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D PH603_05725 LytTR family DNA-binding domain-containing protein K02477 K02477; two-component system, LytTR family, response regulator D PH603_10315 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D PH603_10310 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D PH603_10305 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D PH603_10300 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D PH603_06315 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PH603_04425 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PH603_06325 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PH603_06330 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D PH603_04440 HAMP domain-containing sensor histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D PH603_11205 HAMP domain-containing sensor histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D PH603_15940 HAMP domain-containing sensor histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D PH603_08020 PleD family two-component system response regulator K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D PH603_08015 response regulator K11443 divK; two-component system, cell cycle response regulator DivK D PH603_09205 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D PH603_06345 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA D PH603_00825 Hpt domain-containing protein K10911 luxU; two-component system, phosphorelay protein LuxU D PH603_00625 ActS/PrrB/RegB family redox-sensitive histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D PH603_00630 ActR/PrrA/RegA family redox response regulator transcription factor K15012 regA; two-component system, response regulator RegA D PH603_06170 ATP-binding protein K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] D PH603_12505 CmpA/NrtA family ABC transporter substrate-binding protein K22067 nasS; two-component system, oxyanion-binding sensor D PH603_12510 ANTAR domain-containing protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator C 02035 Bacterial motility proteins [BR:gso02035] D PH603_06315 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D PH603_06320 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D PH603_06335 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D PH603_06330 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D PH603_04425 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PH603_06325 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D PH603_00750 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D PH603_01840 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PH603_03015 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PH603_03440 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PH603_04790 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PH603_06480 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PH603_09920 HAMP domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D PH603_06410 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH D PH603_06350 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D PH603_06355 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D PH603_09165 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D PH603_09160 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D PH603_09190 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D PH603_09195 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D PH603_06390 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D PH603_09200 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D PH603_06415 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D PH603_10830 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D PH603_06405 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D PH603_07880 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D PH603_06420 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF D PH603_10880 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D PH603_10855 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D PH603_10610 hypothetical protein K02415 fliL; flagellar protein FliL D PH603_10835 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D PH603_09185 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D PH603_09175 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D PH603_09180 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D PH603_06435 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD D PH603_10840 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF D PH603_10845 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D PH603_10885 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ D PH603_06430 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE D PH603_11915 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D PH603_11910 flagellin K02397 flgL; flagellar hook-associated protein 3 FlgL D PH603_03785 flagellin K02406 fliC; flagellin D PH603_05485 hypothetical protein K02406 fliC; flagellin D PH603_05490 flagellin K02406 fliC; flagellin D PH603_10895 flagellin K02406 fliC; flagellin D PH603_11005 flagellin K02406 fliC; flagellin D PH603_11010 flagellin K02406 fliC; flagellin D PH603_11015 flagellin K02406 fliC; flagellin D PH603_14125 flagellin K02406 fliC; flagellin D PH603_06400 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D PH603_09840 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D PH603_08285 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D PH603_10805 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D PH603_15405 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB D PH603_03550 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein D PH603_11000 flaF; flagellar biosynthesis regulator FlaF K06602 flaF; flagellar biosynthesis activator protein FlaF D PH603_11020 flagellar protein FlaG K06603 flaG; flagellar protein FlaG D PH603_10995 flbT; flagellar biosynthesis repressor FlbT K06601 flbT; flagellar biosynthesis repressor protein FlbT D PH603_06385 hypothetical protein K02404 flhF; flagellar biosynthesis protein FlhF D PH603_06380 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG D PH603_14410 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D PH603_00120 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D PH603_04700 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D PH603_04695 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D PH603_04690 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D PH603_04685 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D PH603_04675 cellulose synthase operon protein YhjQ/BcsQ K02282 cpaE; pilus assembly protein CpaE D PH603_04670 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:gso04812] D PH603_13500 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D PH603_06750 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D PH603_06745 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D PH603_02250 AAA family ATPase K03496 parA; chromosome partitioning protein D PH603_07955 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein D PH603_02245 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:gso04147] D PH603_03780 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D PH603_10375 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D PH603_15480 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D PH603_15475 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D PH603_15670 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D PH603_05965 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D PH603_14300 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D PH603_05385 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D PH603_13805 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D PH603_02365 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D PH603_05110 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D PH603_09130 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D PH603_09300 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D PH603_07590 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D PH603_07655 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D PH603_02580 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D PH603_02720 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PH603_07455 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PH603_08940 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D PH603_03835 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_08915 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_09375 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D PH603_00975 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D PH603_00260 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D PH603_07770 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D PH603_04225 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D PH603_01555 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D PH603_16065 aminotransferase class V-fold PLP-dependent enzyme K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D PH603_07460 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D PH603_09880 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D PH603_12260 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D PH603_02965 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_08440 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_11175 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_11195 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_14910 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D PH603_10680 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D PH603_08995 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D PH603_03950 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D PH603_11055 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PH603_14630 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D PH603_02635 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D PH603_10350 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_15830 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D PH603_04245 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit D PH603_16155 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D PH603_10415 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:gso02048] D PH603_01120 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D PH603_07005 site-specific DNA-methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72] D PH603_03645 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D PH603_07545 antitoxin K18923 stbD; antitoxin StbD D PH603_13185 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D PH603_13180 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J D PH603_00375 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D PH603_00380 pspB; envelope stress response membrane protein PspB K03970 pspB; phage shock protein B D PH603_06750 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D PH603_13500 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D PH603_08250 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D PH603_10495 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D PH603_10465 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PH603_10695 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D PH603_09545 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D PH603_09550 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:gso04090] D PH603_09130 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D PH603_00975 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] C 01504 Antimicrobial resistance genes [BR:gso01504] D PH603_05675 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump D PH603_06085 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump D PH603_00505 CatB-related O-acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-] D PH603_08950 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D PH603_03455 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PH603_12265 M15 family metallopeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D PH603_05520 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PH603_09090 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D PH603_05525 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D PH603_09095 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D PH603_05970 efflux RND transporter periplasmic adaptor subunit K18298 mexE; membrane fusion protein, multidrug efflux system D PH603_05855 efflux transporter outer membrane subunit K18300 oprN; outer membrane protein, multidrug efflux system D PH603_06665 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D PH603_11410 TolC family outer membrane protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:gso00537] D PH603_11055 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D PH603_05965 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D PH603_14300 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:gso03100] D PH603_01690 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PH603_01475 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D PH603_11425 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D PH603_14495 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D PH603_13405 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D PH603_07885 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D PH603_03650 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D PH603_11745 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PH603_14775 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D PH603_09945 tRNA-Ser K14233 tRNA-Ser; tRNA Ser # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D PH603_12235 aldo/keto reductase K26057 smoB; 6-dehydroglucose reductase [EC:1.1.1.432] D PH603_03310 thiamine pyrophosphate-dependent enzyme K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-] D PH603_03315 transketolase C-terminal domain-containing protein K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] D PH603_01285 GMC family oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11] D PH603_03855 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D PH603_08855 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D PH603_09055 indolepyruvate ferredoxin oxidoreductase family protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D PH603_05765 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D PH603_06205 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D PH603_13375 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D PH603_16485 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D PH603_05770 molybdopterin-dependent oxidoreductase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D PH603_06210 molybdopterin-dependent oxidoreductase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D PH603_13380 molybdopterin-dependent oxidoreductase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D PH603_16480 molybdopterin-dependent oxidoreductase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D PH603_14515 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D PH603_02295 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D PH603_08920 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D PH603_09785 NADP-dependent oxidoreductase K00359 qorA; NADPH:quinone reductase [EC:1.6.5.5] D PH603_10215 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D PH603_14385 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D PH603_01250 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D PH603_13465 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D PH603_14380 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D PH603_03190 glutathione S-transferase N-terminal domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D PH603_15030 glutathione S-transferase N-terminal domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D PH603_05230 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D PH603_12110 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D PH603_12780 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D PH603_09515 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D PH603_01245 ahpC; alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D PH603_13360 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D PH603_02705 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D PH603_05745 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D PH603_14110 cysteine dioxygenase family protein K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91] D PH603_00025 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K22616 olsC; ornithine lipid ester-linked acyl 2-hydroxylase [EC:1.14.11.58] D PH603_13870 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D PH603_16255 2OG-Fe(II) oxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D PH603_12240 LLM class flavin-dependent oxidoreductase K26058 smoC; sulfoquinovose monooxygenase [EC:1.14.14.181] D PH603_10125 merA; mercury(II) reductase K00520 merA; mercuric reductase [EC:1.16.1.1] D PH603_01065 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D PH603_14355 FAD-dependent oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D PH603_02145 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D PH603_15700 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D PH603_11415 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D PH603_12475 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D PH603_07425 THUMP domain-containing protein K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D PH603_06625 beta-ketoacyl-ACP synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D PH603_06630 beta-ketoacyl-ACP synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D PH603_00520 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D PH603_00545 lysophospholipid acyltransferase family protein K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270] D PH603_08985 GNAT family N-acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-] D PH603_00450 GNAT family N-acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-] D PH603_09445 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D PH603_08280 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D PH603_02605 GNAT family N-acetyltransferase K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30] D PH603_13125 hypothetical protein K18786 E2.4.1.321; cellobionic acid phosphorylase [EC:2.4.1.321] D PH603_05320 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D PH603_02330 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D PH603_09520 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D PH603_04600 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D PH603_05055 Stf0 family sulfotransferase K21014 stf0; trehalose 2-sulfotransferase [EC:2.8.2.37] D PH603_12005 CoA transferase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20] D PH603_05900 sialate O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D PH603_05590 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D PH603_05600 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D PH603_12940 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D PH603_14985 carboxylesterase/lipase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D PH603_06265 hotdog domain-containing protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D PH603_08865 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D PH603_15885 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D PH603_03200 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D PH603_06925 alkyl sulfatase dimerization domain-containing protein K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21] D PH603_10020 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D PH603_14660 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-] D PH603_05905 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D PH603_04920 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D PH603_05920 alpha-glucuronidase family glycosyl hydrolase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139] D PH603_12225 alpha-glucosidase K15922 yihQ; sulfoquinovosidase [EC:3.2.1.199] D PH603_07325 DUF2961 domain-containing protein K27494 exoMA1; D-arabinan exo alpha-(1,3)/(1,5)-arabinofuranosidase (non-reducing end) [EC:3.2.1.225] D PH603_01295 ygjK; alpha-glucosidase K03931 ygjK; glucosidase [EC:3.2.1.-] D PH603_06645 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D PH603_01965 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D PH603_14225 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D PH603_00175 penicillin acylase family protein K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97] D PH603_00580 proline iminopeptidase-family hydrolase K18457 laaA; L-proline amide hydrolase [EC:3.5.1.101] D PH603_00095 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D PH603_00990 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D PH603_07375 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D PH603_08455 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D PH603_08895 class I adenylate-forming enzyme family protein K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-] D PH603_12580 2Fe-2S iron-sulfur cluster-binding protein K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D PH603_16030 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] C 99981 Carbohydrate metabolism D PH603_13275 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A D PH603_09225 substrate-binding domain-containing protein K11930 torT; periplasmic protein TorT D PH603_01290 gluconate 2-dehydrogenase subunit 3 family protein K26060 gtd2; glucoside 3-dehydrogenase (cytochrome c) hitch-hiker subunit C 99982 Energy metabolism D PH603_01715 ferredoxin family protein K05524 fdxA; ferredoxin D PH603_04250 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D PH603_10380 isovaleryl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D PH603_02585 EI24 domain-containing protein K06203 cysZ; CysZ protein D PH603_12370 VOC family protein K08234 yaeR; glyoxylase I family protein D PH603_02460 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism C 99987 Cofactor metabolism D PH603_03255 heme biosynthesis HemY N-terminal domain-containing protein K02498 hemY; HemY protein D PH603_01175 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D PH603_07215 SCP2 sterol-binding domain-containing protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT D PH603_15795 COQ9 family protein K18587 COQ9; ubiquinone biosynthesis protein COQ9 D PH603_10340 type II toxin-antitoxin system RatA family toxin K18588 COQ10; coenzyme Q-binding protein COQ10 C 99988 Secondary metabolism D PH603_12305 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D PH603_01090 DoxX family protein K15977 K15977; putative oxidoreductase D PH603_10775 DoxX family protein K15977 K15977; putative oxidoreductase D PH603_15440 DoxX family protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D PH603_03405 cold-shock protein K03704 cspA; cold shock protein D PH603_06460 cold-shock protein K03704 cspA; cold shock protein D PH603_11755 cold-shock protein K03704 cspA; cold shock protein D PH603_09895 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2 C 99974 Translation D PH603_16375 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D PH603_07970 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D PH603_08465 tig; trigger factor K03545 tig; trigger factor D PH603_05235 sulfoxide reductase heme-binding subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D PH603_08160 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D PH603_02535 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein D PH603_07420 proteasome-type protease K07395 K07395; putative proteasome-type protease D PH603_03425 OsmC family protein K07397 yhfA; putative redox protein D PH603_11765 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D PH603_00995 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D PH603_13265 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D PH603_06985 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D PH603_02235 YraN family protein K07460 yraN; putative endonuclease D PH603_15330 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D PH603_08045 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein D PH603_07805 replication-associated recombination protein A K07478 ycaJ; putative ATPase D PH603_07505 Mu transposase C-terminal domain-containing protein K07497 K07497; putative transposase D PH603_10075 Mu transposase C-terminal domain-containing protein K07497 K07497; putative transposase D PH603_10190 IS3 family transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D PH603_00385 pspA; phage shock protein PspA K03969 pspA; phage shock protein A D PH603_03985 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D PH603_06050 glycoside-pentoside-hexuronide (GPH):cation symporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D PH603_13130 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D PH603_03525 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D PH603_12070 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D PH603_04630 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D PH603_06470 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D PH603_12675 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D PH603_01510 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D PH603_00700 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D PH603_06475 sodium/sugar symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D PH603_12175 solute:sodium symporter family transporter K03307 TC.SSS; solute:Na+ symporter, SSS family D PH603_15075 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family D PH603_00360 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D PH603_12435 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D PH603_11105 alanine/glycine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D PH603_12320 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family D PH603_14890 bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D PH603_13665 nucleoside transporter C-terminal domain-containing protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D PH603_01610 septation protein A K06190 ispZ; intracellular septation protein D PH603_07230 ytfE; iron-sulfur cluster repair protein YtfE K07322 ytfE; regulator of cell morphogenesis and NO signaling D PH603_10960 hypothetical protein K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF D PH603_15220 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D PH603_04775 typA; translational GTPase TypA K06207 typA; GTP-binding protein D PH603_02115 ChrR family anti-sigma-E factor K07167 chrR; putative transcriptional regulator D PH603_10865 HPP family protein K07168 K07168; CBS domain-containing membrane protein D PH603_00535 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D PH603_07120 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D PH603_08105 glycine zipper domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB D PH603_04965 capsular biosynthesis protein K07265 kpsS; capsular polysaccharide export protein D PH603_04945 hypothetical protein K07266 kpsC; capsular polysaccharide export protein D PH603_03470 outer membrane beta-barrel protein K07275 ompW; outer membrane protein D PH603_02905 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein D PH603_13960 NfeD family protein K07340 ybbJ; inner membrane protein D PH603_05815 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein D PH603_00730 HlyD family efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein D PH603_15740 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein D PH603_01645 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D PH603_01625 ccmI; c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH D PH603_01630 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH C 99994 Others D PH603_10745 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D PH603_03410 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin D PH603_09775 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein D PH603_14560 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein D PH603_02160 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D PH603_12190 NAD(P)-binding domain-containing protein K07222 K07222; putative flavoprotein involved in K+ transport D PH603_12575 copper resistance protein B K07233 pcoB; copper resistance protein B D PH603_07295 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO B B 09194 Poorly characterized C 99996 General function prediction only D PH603_10530 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D PH603_07950 glucosaminidase domain-containing protein K03796 bax; Bax protein D PH603_03570 group 1 truncated hemoglobin K06886 glbN; hemoglobin D PH603_09100 group III truncated hemoglobin K06886 glbN; hemoglobin D PH603_09765 group 1 truncated hemoglobin K06886 glbN; hemoglobin D PH603_09365 patatin-like phospholipase family protein K07001 K07001; NTE family protein D PH603_13430 patatin-like phospholipase family protein K07001 K07001; NTE family protein D PH603_04045 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily D PH603_10970 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D PH603_15680 HAD family phosphatase K07025 K07025; putative hydrolase of the HAD superfamily D PH603_11355 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D PH603_03300 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D PH603_03290 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D PH603_07195 metal-dependent hydrolase K07038 K07038; inner membrane protein D PH603_08835 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D PH603_02510 FxsA family protein K07113 fxsA; UPF0716 protein FxsA D PH603_00370 SufE family protein K02426 sufE; cysteine desulfuration protein SufE D PH603_03420 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D PH603_03595 SlyX family protein K03745 slyX; SlyX protein D PH603_10400 zinc ribbon domain-containing protein YjdM K06193 phnA; protein PhnA C 99997 Function unknown D PH603_00615 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein D PH603_03920 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein D PH603_12995 GPW/gp25 family protein K06903 W; Bacteriophage baseplate protein W D PH603_11275 ATP-binding protein K06923 K06923; uncharacterized protein D PH603_00150 CocE/NonD family hydrolase K06978 K06978; uncharacterized protein D PH603_04010 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein D PH603_06510 cupin domain-containing protein K06995 K06995; uncharacterized protein D PH603_00885 VOC family protein K06996 K06996; uncharacterized protein D PH603_00340 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein D PH603_05120 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein D PH603_09540 alpha/beta hydrolase K07018 K07018; uncharacterized protein D PH603_03875 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D PH603_05980 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D PH603_14900 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D PH603_11930 DUF839 domain-containing protein K07093 K07093; uncharacterized protein D PH603_14335 phosphoribosyltransferase family protein K07101 K07101; uncharacterized protein D PH603_06150 YeeE/YedE family protein K07112 K07112; uncharacterized protein D PH603_06155 YeeE/YedE family protein K07112 K07112; uncharacterized protein D PH603_08115 hypothetical protein K07126 K07126; uncharacterized protein D PH603_14585 hypothetical protein K07126 K07126; uncharacterized protein D PH603_04365 MAPEG family protein K07136 K07136; uncharacterized protein D PH603_13085 MAPEG family protein K07136 K07136; uncharacterized protein D PH603_12060 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein D PH603_02865 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein D PH603_00800 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D PH603_11750 DUF192 domain-containing protein K09005 K09005; uncharacterized protein D PH603_05450 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D PH603_01530 DUF167 domain-containing protein K09131 K09131; uncharacterized protein D PH603_00605 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D PH603_12470 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein D PH603_07570 cupin domain-containing protein K09705 K09705; uncharacterized protein D PH603_10040 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D PH603_03225 YciI family protein K09780 K09780; uncharacterized protein D PH603_02870 Trm112 family protein K09791 K09791; uncharacterized protein D PH603_06765 SIMPL domain-containing protein K09797 K09797; uncharacterized protein D PH603_10430 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein D PH603_15230 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein D PH603_06200 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein D PH603_03655 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D PH603_07980 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein D PH603_15380 DMT family protein K09922 K09922; uncharacterized protein D PH603_08225 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein D PH603_01100 DUF692 domain-containing protein K09930 K09930; uncharacterized protein D PH603_10785 DUF692 domain-containing protein K09930 K09930; uncharacterized protein D PH603_13565 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein D PH603_15660 DUF1244 domain-containing protein K09948 K09948; uncharacterized protein D PH603_01260 DUF2218 domain-containing protein K09956 K09956; uncharacterized protein D PH603_05125 nuclear transport factor 2 family protein K09958 K09958; uncharacterized protein D PH603_06880 DUF2239 family protein K09965 K09965; uncharacterized protein D PH603_03140 TraB/GumN family protein K09973 K09973; uncharacterized protein D PH603_13930 HutD family protein K09975 K09975; uncharacterized protein D PH603_15280 DUF1272 domain-containing protein K09984 K09984; uncharacterized protein D PH603_13645 ClpXP protease specificity-enhancing factor SspB K09985 K09985; uncharacterized protein D PH603_13785 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein D PH603_15355 DUF1013 domain-containing protein K09987 K09987; uncharacterized protein D PH603_11030 VWA domain-containing protein K09989 K09989; uncharacterized protein D PH603_14795 2OG-Fe(II) oxygenase K09990 K09990; uncharacterized protein D PH603_11405 DUF2497 domain-containing protein K09991 K09991; uncharacterized protein D PH603_00490 DUF448 domain-containing protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 16, 2024