+E Transcription factors KO #

  Transcription Factors - Haemophilus influenzae Rd KW20 (serotype d)

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D HI_1041 modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D HI_1052 transcriptional regulator, araC family, putative K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE C LysR family D HI_1194 glycine cleavage system transcriptional activator (gcvA) K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D HI_0681 transcriptional activator (ilvY) K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D HI_1739 transcriptional activator (metR) K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D HI_0571 hydrogen peroxide-inducible genes activator (oxyR) K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D HI_1200 cys regulon transcriptional activator (cysB) K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator C DeoR family D HI_0619 glycerol-3-phosphate regulon repressor (glpR) K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D HI_0615 L-fucose operon activator (fucR) K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator C LacI family D HI_0506 rbs repressor (rbsR) K02529 galR; LacI family transcriptional regulator, galactose operon repressor D HI_0821 galactose operon repressor (galR) K02529 galR; LacI family transcriptional regulator, galactose operon repressor D HI_1106 xylose operon regluatory protein (xylR) K02529 galR; LacI family transcriptional regulator, galactose operon repressor D HI_1635 purine nucleotide synthesis repressor (purR) K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor C GntR family D HI_0426 fatty acid metabolism regulator protein (fadR) K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D HI_0054 uxu operon regulator (uxuR) K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor C TetR/AcrR family D HI_0893 transcriptional repressor (Bm3R1) K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor D HI_0955 transcriptional regulator (ttk) K05501 slmA; TetR/AcrR family transcriptional regulator D HI_0570 conserved hypothetical protein K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator C Lrp/AsnC family D HI_0563 transcriptional regulatory protein (asnC) K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D HI_0224 transcriptional regulator, putative K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D HI_1596 leucine responsive regulatory protein (lrp) K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family C MarR family C MerR family D HI_0293 transcriptional regulator, merR family, putative K19591 cueR; MerR family transcriptional regulator, copper efflux regulator C Fur family D HI_0190 ferric uptake regulation protein (fur) K03711 fur; Fur family transcriptional regulator, ferric uptake regulator C IclR family D HI_1032 transcriptional regulator, putative K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor C CRP/FNR family D HI_0957 catabolite gene activator (crp) K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D HI_1425 fumarate (and nitrate) reduction regulatory protein (fnr) K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein C Rrf2 family D HI_0379 conserved hypothetical protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor C ArsR family C XRE family C PadR family C Other families D HI_0220.1 biotin operon repressor/biotin acetyl coenzyme A carboxylase synthetase (birA) K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D HI_0980 Hin recombinational enhancer binding protein (fis) K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D HI_0830 trp operon repressor (trpR) K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D HI_1477 DNA-binding protein (ner) K07724 ner; Ner family transcriptional regulator D HI_0763 transcriptional regulator (nadR) K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D HI_0093 conserved hypothetical protein K02647 cdaR; carbohydrate diacid regulator D HI_1694 molybdenum transport protein (modE) K02019 modE; molybdate transport system regulatory protein B Ribbon-helix-helix C CopG family C Other families D HI_0294 met repressor (metJ) K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor B Other transcription factors C BglG family C Others D HI_0163 transcriptional regulator, putative (bolA) K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D HI_1209 arginine repressor (argR) K03402 argR; transcriptional regulator of arginine metabolism D HI_0358 transcriptional activator, putative K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D HI_0410 transcriptional regulatory protein (tyrR) K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D HI_0459 pyrimidine operon regulatory protein (pyrR) K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D HI_0304 conserved hypothetical protein K07735 algH; putative transcriptional regulator D HI_0062 dnaK suppressor protein (dksA) K06204 dksA; RNA polymerase-binding transcription factor D HI_0943 conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR D HI_1129 conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024 #
Classification taken and modified from TRANSFAC 7.0