+E Messenger RNA Biogenesis KO
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Messenger RNA Biogenesis - Lipotes vexillifer (Yangtze River dolphin)
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AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 103084436 RNMT; mRNA cap guanine-N7 methyltransferase isoform X1 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 103068904 CDK7; cyclin-dependent kinase 7 isoform X1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 103084086 CMTR1; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 isoform X1 K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57]
E 103086480 CMTR2; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296]
E 103070990 FAM103A1; RNMT-activating mini protein K18708 FAM103A1; RNMT-activating mini protein
D Cap binding complex
E 103076205 nuclear cap-binding protein subunit 1-like K12882 NCBP1; nuclear cap-binding protein subunit 1
E 103076695 uncharacterized protein LOC103076695 K12883 NCBP2; nuclear cap-binding protein subunit 2
E 103081357 NCBP2; nuclear cap-binding protein subunit 2 K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 103068721 NUDT21; cleavage and polyadenylation specificity factor subunit 5 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 103086286 CPSF7; cleavage and polyadenylation specificity factor subunit 7 isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E 103087766 CPSF6; cleavage and polyadenylation specificity factor subunit 6 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 103089865 CLP1; polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1 K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 103079148 CPSF1; cleavage and polyadenylation specificity factor subunit 1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 103082208 CPSF2; cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 103087288 CPSF3; cleavage and polyadenylation specificity factor subunit 3 isoform X1 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 103090390 CPSF4L; LOW QUALITY PROTEIN: putative cleavage and polyadenylation specificity factor subunit 4-like protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 103090101 CPSF4; cleavage and polyadenylation specificity factor subunit 4 isoform X1 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 103072484 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 isoform X1 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1
E 103081606 WDR33; pre-mRNA 3' end processing protein WDR33 isoform X1 K15542 PFS2; polyadenylation factor subunit 2
E 103085962 WDR82; WD repeat-containing protein 82 K14962 WDR82; COMPASS component SWD2
E 103086084 LOW QUALITY PROTEIN: serine/threonine-protein phosphatase PP1-gamma catalytic subunit B-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 103072994 PPP1CC; serine/threonine-protein phosphatase PP1-gamma catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 103074387 PPP1CA; serine/threonine-protein phosphatase PP1-alpha catalytic subunit isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 103080471 PPP1CB; serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 103090190 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E 103086572 putative RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like protein 1-like K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 103080794 CSTF1; cleavage stimulation factor subunit 1 K14406 CSTF1; cleavage stimulation factor subunit 1
E 103088241 CSTF2; cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 103071093 CSTF2T; cleavage stimulation factor subunit 2 tau variant isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 103080085 CSTF3; cleavage stimulation factor subunit 3 K14408 CSTF3; cleavage stimulation factor subunit 3
E 103070921 SYMPK; symplekin K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 103071512 SNRPB; small nuclear ribonucleoprotein-associated protein B' isoform X1 K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 103075143 SNRPD3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 103077263 small nuclear ribonucleoprotein E-like K11097 SNRPE; small nuclear ribonucleoprotein E
E 103091090 SNRPE; small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
E 103072935 SNRPF; small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 103091099 SNRPG; small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 103076442 LSM10; U7 snRNA-associated Sm-like protein LSm10 K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10
E 103089728 LSM11; U7 snRNA-associated Sm-like protein LSm11 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11
E 103082208 CPSF2; cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 103087288 CPSF3; cleavage and polyadenylation specificity factor subunit 3 isoform X1 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 103088241 CSTF2; cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 103071093 CSTF2T; cleavage stimulation factor subunit 2 tau variant isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 103070921 SYMPK; symplekin K06100 SYMPK; symplekin
E 103088148 SLBP; histone RNA hairpin-binding protein K18710 SLBP; histone RNA hairpin-binding protein
E 103088746 oocyte-specific histone RNA stem-loop-binding protein 2-like isoform X1 K18710 SLBP; histone RNA hairpin-binding protein
E 103087783 CASP8AP2; CASP8-associated protein 2 K25593 CASP8AP2; CASP8-associated protein 2
D DRB sensitivity inducing factor (DSIF) complex
E 103083915 SUPT4H1; transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4
E 103090900 SUPT5H; transcription elongation factor SPT5 isoform X1 K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 103077878 METTL3; N6-adenosine-methyltransferase 70 kDa subunit K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 103078027 METTL14; N6-adenosine-methyltransferase subunit METTL14 K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 103086548 METTL4; methyltransferase-like protein 4 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72]
E 103079111 METTL16; methyltransferase-like protein 16 K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 103068547 WTAP; pre-mRNA-splicing regulator WTAP isoform X1 K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 103073776 pre-mRNA-splicing regulator WTAP-like K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 103086065 KIAA1429; protein virilizer homolog K22910 VIRMA; protein virilizer
E 103075235 RBM15; putative RNA-binding protein 15 isoform X1 K13190 RBM15; RNA-binding protein 15
E 103070614 RBM15B; putative RNA-binding protein 15B K13190 RBM15; RNA-binding protein 15
E 103082169 ZC3H13; zinc finger CCCH domain-containing protein 13 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 103083312 CBLL1; E3 ubiquitin-protein ligase Hakai isoform X1 K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 103083243 PAPOLG; poly(A) polymerase gamma K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 103087509 PAPOLA; poly(A) polymerase alpha isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 103082667 PAPD4; poly(A) RNA polymerase GLD2 isoform X1 K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 103079879 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52]
D Negative regulators of mRNA 3' end processing
E 103085060 BARD1; BRCA1-associated RING domain protein 1 isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 103071612 RBM26; RNA-binding protein 26 isoform X1 K13192 RBM26; RNA-binding protein 26
E 103073039 FTO; alpha-ketoglutarate-dependent dioxygenase FTO isoform X1 K19469 FTO; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 103074549 ALKBH5; RNA demethylase ALKBH5 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 103075476 TARDBP; TAR DNA-binding protein 43 K23600 TARDBP; TAR DNA-binding protein 43
C Other processing factors
D 103088070 DHX40; probable ATP-dependent RNA helicase DHX40 isoform X1 K18711 DHX40; ATP-dependent RNA helicase DHX40 [EC:5.6.2.6]
D 103087681 KIN; DNA/RNA-binding protein KIN17 K13102 KIN; DNA/RNA-binding protein KIN17
D 103074171 METTL8; methyltransferase-like protein 8 K24975 METTL8; mRNA N(3)-methylcytidine methyltransferase METTL8 [EC:2.1.1.-]
D 103076965 METTL22; methyltransferase-like protein 22 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 103091236 FAM46A; protein FAM46A-like isoform X1 K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 103083326 FAM46B; protein FAM46B K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 103087487 FAM46C; protein FAM46C K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19]
D 103084852 protein FAM46D-like K23035 TENT5D; terminal nucleotidyltransferase 5D [EC:2.7.7.19]
D 103078689 ZC3H14; zinc finger CCCH domain-containing protein 14 isoform X1 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14
D 103070522 SRRT; serrate RNA effector molecule homolog isoform X1 K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 103090932 RBM8A; RNA-binding protein 8A isoform X1 K12876 RBM8A; RNA-binding protein 8A
E 103082198 MAGOH; protein mago nashi homolog isoform X1 K12877 MAGOH; protein mago nashi
E 103074663 MAGOHB; protein mago nashi homolog 2 K12877 MAGOH; protein mago nashi
E 103077382 ALYREF; THO complex subunit 4 K12881 THOC4; THO complex subunit 4
E 103084702 DDX39B; spliceosome RNA helicase DDX39B isoform X1 K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 103090422 EIF4A3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 103068916 CCDC174; coiled-coil domain-containing protein 174 K25178 CCDC174; coiled-coil domain-containing protein 174
E 103080802 CASC3; LOW QUALITY PROTEIN: cancer susceptibility candidate 3 K14323 CASC3; protein CASC3
E 103069211 SAP18; histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18
E 103082885 PNN; pinin isoform X1 K13114 PNN; pinin
E 103086038 ACIN1; apoptotic chromatin condensation inducer in the nucleus isoform X1 K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 103084592 RNPS1; RNA-binding protein with serine-rich domain 1 K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 103069469 serine/arginine repetitive matrix protein 1-like K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 103083639 THOC1; THO complex subunit 1 K12878 THOC1; THO complex subunit 1
E 103085374 THOC2; THO complex subunit 2 K12879 THOC2; THO complex subunit 2
E 103088572 THOC3; THO complex subunit 3 K12880 THOC3; THO complex subunit 3
E 103077382 ALYREF; THO complex subunit 4 K12881 THOC4; THO complex subunit 4
E 103083961 THOC5; THO complex subunit 5 homolog K13174 THOC5; THO complex subunit 5
E 103077450 THOC6; THO complex subunit 6 homolog isoform X1 K13175 THOC6; THO complex subunit 6
E 103074166 THOC7; THO complex subunit 7 homolog isoform X1 K13176 THOC7; THO complex subunit 7
D TREX-2 complex
E 103073629 PCID2; PCI domain-containing protein 2 K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 103080626 ENY2; transcription and mRNA export factor ENY2 isoform X1 K11368 ENY2; enhancer of yellow 2 transcription factor
E 103086355 CETN2; centrin-2 K10840 CETN2; centrin-2
E 103079642 CETN3; centrin-3 K16466 CETN3; centrin-3
E 103076978 MCM3AP; germinal-center associated nuclear protein K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48]
D Nuclear pore complex
E 103090894 TPR; nucleoprotein TPR K09291 TPR; nucleoprotein TPR
E 103082098 RAE1; mRNA export factor K14298 RAE1; mRNA export factor
E 103075696 LOW QUALITY PROTEIN: protein SEC13 homolog K14004 SEC13; protein transport protein SEC13
E 103074005 NUP37; nucleoporin Nup37 K14302 NUP37; nuclear pore complex protein Nup37
E 103081497 NUP85; nuclear pore complex protein Nup85 isoform X1 K14304 NUP85; nuclear pore complex protein Nup85
E 103072583 NUP43; nucleoporin Nup43 K14305 NUP43; nuclear pore complex protein Nup43
E 103086810 NUP50; LOW QUALITY PROTEIN: nuclear pore complex protein Nup50 K14295 NUP50; nuclear pore complex protein Nup50
E 103072846 NUP54; nuclear pore complex protein Nup54 isoform X1 K14308 NUP54; nuclear pore complex protein Nup54
E 103085427 nuclear pore glycoprotein p62-like K14306 NUP62; nuclear pore complex protein Nup62
E 103076389 NUP62; nuclear pore glycoprotein p62 K14306 NUP62; nuclear pore complex protein Nup62
E 103069254 NUP88; nuclear pore complex protein Nup88 K14318 NUP88; nuclear pore complex protein Nup88
E 103076323 NUP93; nuclear pore complex protein Nup93 isoform X1 K14309 NUP93; nuclear pore complex protein Nup93
E 103084249 NUP98; nuclear pore complex protein Nup98-Nup96 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 103083147 NUP107; nuclear pore complex protein Nup107 K14301 NUP107; nuclear pore complex protein Nup107
E 103078699 NUP133; nuclear pore complex protein Nup133 K14300 NUP133; nuclear pore complex protein Nup133
E 103075438 NUP188; nucleoporin NUP188 homolog K14311 NUP188; nuclear pore complex protein Nup188
E 103090058 NUP153; nuclear pore complex protein Nup153 isoform X1 K14296 NUP153; nuclear pore complex protein Nup153
E 103081546 NUP155; nuclear pore complex protein Nup155 isoform X1 K14312 NUP155; nuclear pore complex protein Nup155
E 103070913 NUP160; nuclear pore complex protein Nup160 K14303 NUP160; nuclear pore complex protein Nup160
E 103090917 NUP35; nucleoporin NUP53 K14313 NUP35; nuclear pore complex protein Nup53
E 103069225 NUP205; nuclear pore complex protein Nup205 K14310 NUP205; nuclear pore complex protein Nup205
E 103084693 NUP210L; nuclear pore membrane glycoprotein 210-like isoform X1 K14314 NUP210; nuclear pore complex protein Nup210
E 103090145 NUP210; nuclear pore membrane glycoprotein 210-like K14314 NUP210; nuclear pore complex protein Nup210
E 103082863 nuclear pore membrane glycoprotein 210-like K14314 NUP210; nuclear pore complex protein Nup210
E 103070544 NUP214; nuclear pore complex protein Nup214 K14317 NUP214; nuclear pore complex protein Nup214
E 103078467 LOW QUALITY PROTEIN: POM121-like protein 2-like K14316 POM121; nuclear pore complex protein Nup121
E 103082004 POM121C; nuclear envelope pore membrane protein POM 121C K14316 POM121; nuclear pore complex protein Nup121
E 103089249 NUPL1; nucleoporin p58/p45 K14307 NUPL1; nucleoporin p58/p45
E 103082890 NUPL2; nucleoporin-like protein 2 K14321 NUPL2; nucleoporin-like protein 2
E 103080840 NDC1; nucleoporin NDC1 isoform X1 K14315 NDC1; nucleoporin NDC1
E 103085439 SEH1L; nucleoporin SEH1 isoform X1 K14299 SEH1; nucleoporin SEH1
E 103071752 RANBP2; E3 SUMO-protein ligase RanBP2 isoform X1 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 103071918 SENP2; sentrin-specific protease 2 isoform X1 K03345 SENP2; sentrin-specific protease 2 (axin associating molecule) [EC:3.4.22.68]
E 103080899 AAAS; aladin K14320 AAAS; aladin
E 103079642 CETN3; centrin-3 K16466 CETN3; centrin-3
E 103070998 GLE1; nucleoporin GLE1 K18723 GLE1; nucleoporin GLE1
E 103069667 nuclear RNA export factor 3-like K14284 NXF; nuclear RNA export factor
E 103078847 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
E 103068724 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
E 103072768 NXF1; nuclear RNA export factor 1 isoform X1 K14284 NXF; nuclear RNA export factor
E 103090438 nuclear RNA export factor 3-like K14284 NXF; nuclear RNA export factor
E 103086178 NXT1; NTF2-related export protein 1 K14285 NXT1_2; NTF2-related export protein 1/2
E 103069206 NXT2; NTF2-related export protein 2 K14285 NXT1_2; NTF2-related export protein 1/2
D Ran-mediated transport factors
E 103082587 RAN; GTP-binding nuclear protein Ran isoform X1 K07936 RAN; GTP-binding nuclear protein Ran
E 103070167 GTP-binding nuclear protein Ran-like K07936 RAN; GTP-binding nuclear protein Ran
E 103075184 acidic leucine-rich nuclear phosphoprotein 32 family member A-like K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
E 103074524 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B
E 103085615 TNFSF13; tumor necrosis factor ligand superfamily member 13 isoform X1 K05475 TNFSF13; tumor necrosis factor ligand superfamily member 13
E 103069565 ELAVL1; ELAV-like protein 1 K13088 ELAVL1; ELAV-like protein 1
E 103089697 ELAV-like protein 2-like isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 103075926 ELAVL4; ELAV-like protein 4 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 103069105 ELAVL3; ELAV-like protein 3 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 103075382 FAF2; FAS-associated factor 2 K18726 FAF2; FAS-associated factor 2
E 103080303 VCP; transitional endoplasmic reticulum ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
E 103081355 VCPKMT; protein-lysine methyltransferase METTL21D isoform X1 K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 103086513 TNPO2; transportin-2 K18727 TNPO2; transportin-2
E 103080880 XPO1; exportin-1 K14290 XPO1; exportin-1
E 103087985 XPO7; exportin-7 K18460 XPO7; exportin-7
E 103070674 RANBP17; ran-binding protein 17 K24115 RANBP17; Ran-binding protein 17
E 103078177 RANGAP1; ran GTPase-activating protein 1 K14319 RANGAP1; Ran GTPase-activating protein 1
E 103090611 TAF15; TATA-binding protein-associated factor 2N K14651 TAF15; transcription initiation factor TFIID subunit 15
D eIF4F and regulatory proteins
E 103085727 EIF4E2; eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 103089643 EIF4E1B; eukaryotic translation initiation factor 4E type 1B K03259 EIF4E; translation initiation factor 4E
E 103086573 EIF4E; eukaryotic translation initiation factor 4E K03259 EIF4E; translation initiation factor 4E
E 103086924 EIF4A1; eukaryotic initiation factor 4A-I isoform X1 K03257 EIF4A; translation initiation factor 4A
E 103077428 EIF4A2; eukaryotic initiation factor 4A-II isoform X1 K03257 EIF4A; translation initiation factor 4A
E 103086318 EIF4G1; eukaryotic translation initiation factor 4 gamma 1 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 103074768 EIF4G2; eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 103081992 EIF4B; eukaryotic translation initiation factor 4B K03258 EIF4B; translation initiation factor 4B
E 103076149 EIF4H; eukaryotic translation initiation factor 4H isoform X1 K24086 EIF4H; translation initiation factor 4H
E 103074746 EIF4EBP1; eukaryotic translation initiation factor 4E-binding protein 1 K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1
E 103076467 EIF4EBP3; eukaryotic translation initiation factor 4E-binding protein 3 K18645 EIF4EBP3; eukaryotic translation initiation factor 4E binding protein 3
E 103085696 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 103068785 ANGEL2; protein angel homolog 2 K18729 ANGEL; protein angel
E 103088297 ANGEL1; protein angel homolog 1 K18729 ANGEL; protein angel
E 103088381 FXR2; fragile X mental retardation syndrome-related protein 2 K15516 FMR; fragile X mental retardation protein
E 103081379 FMR1; fragile X mental retardation protein 1 homolog isoform X1 K15516 FMR; fragile X mental retardation protein
E 103075133 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 103091518 CYFIP2; cytoplasmic FMR1-interacting protein 2 isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 103077568 CYFIP1; cytoplasmic FMR1-interacting protein 1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 103073657 GEMIN5; gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5
E 103087603 TACC3; transforming acidic coiled-coil-containing protein 3 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 103068326 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103073491 CPEB3; cytoplasmic polyadenylation element-binding protein 3 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103074205 cytoplasmic polyadenylation element-binding protein 2-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103080989 CPEB4; cytoplasmic polyadenylation element-binding protein 4 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103082221 DDX3X; ATP-dependent RNA helicase DDX3X-like isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 103071812 GIGYF1; PERQ amino acid-rich with GYF domain-containing protein 1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 103087108 GIGYF2; LOW QUALITY PROTEIN: PERQ amino acid-rich with GYF domain-containing protein 2 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 103088623 PABPC4; polyadenylate-binding protein 4 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 103075279 PABPC5; polyadenylate-binding protein 5 K13126 PABPC; polyadenylate-binding protein
E 103086490 PABPC1; polyadenylate-binding protein 1 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 103078587 PABPC1L; polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 103084530 PAIP1; polyadenylate-binding protein-interacting protein 1 isoform X1 K14322 PAIP1; polyadenylate-binding protein-interacting protein 1
E 103070482 PAIP2; LOW QUALITY PROTEIN: polyadenylate-binding protein-interacting protein 2 K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 103088360 PAIP2B; polyadenylate-binding protein-interacting protein 2B K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 103070845 SKIV2L; helicase SKI2W isoform X1 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 103078037 DEAF1; deformed epidermal autoregulatory factor 1 homolog K23041 DEAF1; deformed epidermal autoregulatory factor 1
E 103069493 malignant T-cell-amplified sequence 1-like K07575 MCTS; malignant T-cell-amplified sequence
E 103087034 MCTS1; malignant T-cell-amplified sequence 1 isoform X1 K07575 MCTS; malignant T-cell-amplified sequence
E 103074939 DENR; density-regulated protein K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
E 103079923 APOBEC1; c->U-editing enzyme APOBEC-1 K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 103072368 A1CF; APOBEC1 complementation factor isoform X1 K24978 A1CF; APOBEC1 complementation factor
D Other transport factors
E 103090710 WIBG; partner of Y14 and mago K14294 WIBG; partner of Y14 and mago
E 103076816 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103076769 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103078712 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103070809 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103078733 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103080712 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103068544 DAZAP1; DAZ-associated protein 1 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 103079990 MSI1; RNA-binding protein Musashi homolog 1 K14411 MSI; RNA-binding protein Musashi
E 103068472 MSI2; RNA-binding protein Musashi homolog 2 K14411 MSI; RNA-binding protein Musashi
E 103070620 HBS1L; HBS1-like protein isoform X1 K14416 HBS1; elongation factor 1 alpha-like protein
E 103086267 PELO; protein pelota homolog K06965 PELO; protein pelota
E 103069240 PABPN1L; embryonic polyadenylate-binding protein 2 K14396 PABPN1; polyadenylate-binding protein 2
E 103069427 polyadenylate-binding protein 2-like K14396 PABPN1; polyadenylate-binding protein 2
E 103088959 PABPN1; LOW QUALITY PROTEIN: poly(A) binding protein, nuclear 1 K14396 PABPN1; polyadenylate-binding protein 2
E 103082339 DDX19B; ATP-dependent RNA helicase DDX19B-like isoform X1 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 103083515 ATP-dependent RNA helicase DDX19A-like isoform X1 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 103076123 DDX25; ATP-dependent RNA helicase DDX25 K18656 DDX25; ATP-dependent RNA helicase DDX25 [EC:5.6.2.7]
E 103088473 XAB2; pre-mRNA-splicing factor SYF1 K12867 SYF1; pre-mRNA-splicing factor SYF1
E 103069509 SARNP; SAP domain-containing ribonucleoprotein K18732 SARNP; SAP domain-containing ribonucleoprotein
E 103080790 RCC1; regulator of chromosome condensation-like isoform X1 K11493 RCC1; regulator of chromosome condensation
E 103076679 LARP6; la-related protein 6 K18733 LARP6; la-related protein 6
E 103073600 PURA; transcriptional activator protein Pur-alpha isoform X1 K21772 PURA; transcriptional activator protein Pur-alpha
E 103080250 PURB; transcriptional activator protein Pur-beta K21799 PURB; transcriptional activator protein Pur-beta
E 103070279 POLDIP3; polymerase delta-interacting protein 3 isoform X1 K22414 POLDIP3; polymerase delta-interacting protein 3
E 103090821 ZC3H11A; zinc finger CCCH domain-containing protein 11A K22415 ZC3H11; zinc finger CCCH domain-containing protein 11
E 103087243 LENG8; leukocyte receptor cluster member 8 homolog K23802 LENG8; SAC3 family protein LENG8/THP3
E 103076229 PATL2; protein PAT1 homolog 2 K24823 PATL2; protein PAT1 homolog 2
C Surveillance factors
D Surveillance complex
E 103090771 ETF1; eukaryotic peptide chain release factor subunit 1 isoform X1 K03265 ETF1; peptide chain release factor subunit 1
E 103068973 eukaryotic peptide chain release factor GTP-binding subunit ERF3B-like isoform X1 K03267 ERF3; peptide chain release factor subunit 3
E 103086478 GSPT1; eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1 K03267 ERF3; peptide chain release factor subunit 3
E 103082780 UPF1; regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 103069173 UPF2; regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2
E 103075430 UPF3B; regulator of nonsense transcripts 3B isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 103075114 UPF3A; regulator of nonsense transcripts 3A K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 103086967 PPP2CB; serine/threonine-protein phosphatase 2A catalytic subunit beta isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 103074714 PPP2CA; serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 103082213 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform-like isoform X1 K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 103068746 PPP2R1B; serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X1 K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 103075527 PPP2R2B; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 103090378 PPP2R2D; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 103070944 PPP2R2C; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 103085298 PPP2R2A; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 103086552 PPP2R3A; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 103087752 PPP2R3B; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 103090518 PPP2R3C; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 103077162 PPP2R5A; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 103069560 PPP2R5E; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 103087914 PPP2R5C; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 103079037 PPP2R5D; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 103074623 PPP2R5B; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 103068946 SMG1; serine/threonine-protein kinase SMG1 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 103078668 SMG5; protein SMG5 K11125 SMG5; protein SMG5
E 103080119 SMG6; telomerase-binding protein EST1A K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 103090809 SMG7; protein SMG7 isoform X1 K14409 SMG7; protein SMG7
E 103087050 SMG8; protein SMG8 K18734 SMG8; protein SMG8
E 103086465 SMG9; protein SMG9 K18735 SMG9; protein SMG9
E 103071812 GIGYF1; PERQ amino acid-rich with GYF domain-containing protein 1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 103087108 GIGYF2; LOW QUALITY PROTEIN: PERQ amino acid-rich with GYF domain-containing protein 2 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 103078693 SECISBP2; selenocysteine insertion sequence-binding protein 2 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 103088184 SECISBP2L; selenocysteine insertion sequence-binding protein 2-like isoform X1 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 103086742 DHX34; probable ATP-dependent RNA helicase DHX34 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6]
E 103087364 GTPBP1; GTP-binding protein 1 K24887 GTPBP1; GTP-binding protein 1
C Factors involved in mRNA localization
D Cargo complex
E 103080978 pumilio domain-containing protein KIAA0020 homolog K14844 PUF6; pumilio homology domain family member 6
E 103089568 MYO5B; LOW QUALITY PROTEIN: unconventional myosin-Vb K10357 MYO5; myosin V
E 103089376 MYO5C; unconventional myosin-Vc K10357 MYO5; myosin V
E 103091126 MYO5A; unconventional myosin-Va K10357 MYO5; myosin V
E 103080644 BICD2; protein bicaudal D homolog 2 isoform X1 K18739 BICD; protein bicaudal D
E 103081028 BICD1; protein bicaudal D homolog 1 isoform X1 K18739 BICD; protein bicaudal D
E 103071211 EXD1; exonuclease 3'-5' domain-containing protein 1 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
E 103086383 ACTG1; actin, cytoplasmic 2 K05692 ACTB_G1; actin beta/gamma 1
E 103077223 ACTB; actin, cytoplasmic 1 K05692 ACTB_G1; actin beta/gamma 1
E 103083649 MBP; myelin basic protein isoform X1 K17269 MBP; myelin basic protein
E 103080964 VIM; vimentin K07606 VIM; vimentin
E 103075570 metallothionein-1E-like K14739 MT1_2; metallothionein 1/2
E 103069839 metallothionein-1X-like K14739 MT1_2; metallothionein 1/2
E 103070111 metallothionein-1E-like K14739 MT1_2; metallothionein 1/2
E 103070640 metallothionein-1E-like K14739 MT1_2; metallothionein 1/2
E 103079656 metallothionein-1E-like K14739 MT1_2; metallothionein 1/2
E 103089962 MYC; myc proto-oncogene protein isoform X1 K04377 MYC; Myc proto-oncogene protein
E 103083062 GDF1; embryonic growth/differentiation factor 1 K05495 GDF1; growth differentiation factor 1
E 103074685 TBX6; T-box transcription factor TBX6 K10180 TBX6; T-box protein 6
E 103072641 NANOS1; nanos homolog 1 K18741 NANOS1; protein nanos 1
D Trans-acting binding proteins
E 103087702 ZBP1; LOW QUALITY PROTEIN: z-DNA-binding protein 1 K12965 ZBP1; Z-DNA binding protein 1
E 103072833 FUBP3; far upstream element-binding protein 3 K13210 FUBP; far upstream element-binding protein
E 103082416 FUBP1; far upstream element-binding protein 1 isoform X1 K13210 FUBP; far upstream element-binding protein
E 103078109 KHSRP; far upstream element-binding protein 2 K13210 FUBP; far upstream element-binding protein
E 103087561 elongation factor 1-alpha 1-like K03231 EEF1A; elongation factor 1-alpha
E 103083682 EEF1A1; elongation factor 1-alpha 1 K03231 EEF1A; elongation factor 1-alpha
E 103084801 EEF1A2; elongation factor 1-alpha 2 K03231 EEF1A; elongation factor 1-alpha
E 103080420 EEF1G; elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma
E 103089048 heterogeneous nuclear ribonucleoproteins A2/B1-like K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1
E 103076317 HNRNPA2B1; heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1 K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1
E 103079312 HAX1; HCLS1-associated protein X-1 isoform X1 K16220 HAX1; HCLS1-associated protein X-1
E 103077145 AGFG1; arf-GAP domain and FG repeat-containing protein 1 isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 103090251 STAU1; double-stranded RNA-binding protein Staufen homolog 1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 103072837 STAU2; double-stranded RNA-binding protein Staufen homolog 2 K17597 STAU; double-stranded RNA-binding protein Staufen
E 103083713 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3 isoform X1 K13197 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3
E 103075088 PTBP1; polypyrimidine tract-binding protein 1 isoform X1 K13218 PTBP1; polypyrimidine tract-binding protein 1
E 103068326 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103073491 CPEB3; cytoplasmic polyadenylation element-binding protein 3 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103074205 cytoplasmic polyadenylation element-binding protein 2-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103080989 CPEB4; cytoplasmic polyadenylation element-binding protein 4 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
D Other mRNA localization factors
E 103088381 FXR2; fragile X mental retardation syndrome-related protein 2 K15516 FMR; fragile X mental retardation protein
E 103081379 FMR1; fragile X mental retardation protein 1 homolog isoform X1 K15516 FMR; fragile X mental retardation protein
E 103075133 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 103091518 CYFIP2; cytoplasmic FMR1-interacting protein 2 isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 103077568 CYFIP1; cytoplasmic FMR1-interacting protein 1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 103078456 PCBP3; poly(rC)-binding protein 3 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 103081297 PCBP4; poly(rC)-binding protein 4 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 103077777 CAPRIN1; caprin-1 K18743 CAPRIN1; caprin-1
E 103078259 CAPRIN2; caprin-2 isoform X1 K18744 CAPRIN2; caprin-2
E 103086629 YBX1; nuclease-sensitive element-binding protein 1 K09276 YBX1; Y-box-binding protein 1
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 103082255 XRN1; 5'-3' exoribonuclease 1 isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 103079391 AGO3; protein argonaute-3 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 103079850 AGO1; protein argonaute-1 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 103080295 AGO4; protein argonaute-4 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 103069486 AGO2; LOW QUALITY PROTEIN: protein argonaute-2 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 103085727 EIF4E2; eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 103089643 EIF4E1B; eukaryotic translation initiation factor 4E type 1B K03259 EIF4E; translation initiation factor 4E
E 103086573 EIF4E; eukaryotic translation initiation factor 4E K03259 EIF4E; translation initiation factor 4E
E 103082780 UPF1; regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 103082221 DDX3X; ATP-dependent RNA helicase DDX3X-like isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 103089445 DDX6; probable ATP-dependent RNA helicase DDX6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 103091121 MEX3D; RNA-binding protein MEX3D K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 103081955 MEX3A; RNA-binding protein MEX3A K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 103075050 MEX3B; RNA-binding protein MEX3B isoform X1 K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 103083983 MEX3C; RNA-binding E3 ubiquitin-protein ligase MEX3C K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 103084660 FASTK; fas-activated serine/threonine kinase isoform X1 K08290 FASTK; Fas-activated serine/threonine kinase [EC:2.7.11.8]
E 103085600 LSM14A; protein LSM14 homolog A isoform X1 K18749 LSM14; protein LSM14
E 103091037 LSM14B; protein LSM14 homolog B K18749 LSM14; protein LSM14
E 103069640 PCBP1; poly(rC)-binding protein 1 K12889 PCBP1; poly(rC)-binding protein 1
E 103086629 YBX1; nuclease-sensitive element-binding protein 1 K09276 YBX1; Y-box-binding protein 1
E 103074808 LIMD1; LOW QUALITY PROTEIN: LIM domain-containing protein 1 K16682 AJUBA; LIM domain-containing protein
E 103087535 WTIP; Wilms tumor protein 1-interacting protein K16682 AJUBA; LIM domain-containing protein
E 103084092 AJUBA; LIM domain-containing protein ajuba K16682 AJUBA; LIM domain-containing protein
E 103079923 APOBEC1; c->U-editing enzyme APOBEC-1 K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 103069082 APOBEC3G; DNA dC->dU-editing enzyme APOBEC-3G K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 103086070 APOBEC3B; DNA dC->dU-editing enzyme APOBEC-3B K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 103090228 MOV10; putative helicase MOV-10 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 103078479 PNRC2; proline-rich nuclear receptor coactivator 2 K18751 PNRC2; proline-rich nuclear receptor coactivator 2
E 103084965 TNPO1; transportin-1 isoform X1 K18752 TNPO1; transportin-1
E 103068946 SMG1; serine/threonine-protein kinase SMG1 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 103078668 SMG5; protein SMG5 K11125 SMG5; protein SMG5
E 103080119 SMG6; telomerase-binding protein EST1A K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 103090809 SMG7; protein SMG7 isoform X1 K14409 SMG7; protein SMG7
E 103089945 ZFP36; tristetraprolin K15308 TTP; tristetraprolin
E 103071779 ZFP36L2; LOW QUALITY PROTEIN: zinc finger protein 36, C3H1 type-like 2 K18753 ZFP36L; butyrate response factor
E 103089436 ZFP36L1; zinc finger protein 36, C3H1 type-like 1-like K18753 ZFP36L; butyrate response factor
E 103090748 zinc finger protein 36, C3H1 type-like 1-like K18753 ZFP36L; butyrate response factor
E 103074263 LIN28B; protein lin-28 homolog B isoform X1 K18754 LIN28; protein lin-28
E 103087927 LIN28A; protein lin-28 homolog A K18754 LIN28; protein lin-28
E 103073863 HTT; huntingtin K04533 HD; huntingtin
E 103077984 IPO8; importin-8 K18755 IPO8; importin-8
E 103070810 BICC1; protein bicaudal C homolog 1-like K18756 BICC1; protein bicaudal C
E 103076816 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103076769 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103078712 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103070809 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103078733 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103080712 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103077464 PRKACB; cAMP-dependent protein kinase catalytic subunit beta K04345 PKA; protein kinase A [EC:2.7.11.11]
E 103074112 PRKACA; cAMP-dependent protein kinase catalytic subunit alpha isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 103072933 LARP1; LOW QUALITY PROTEIN: La ribonucleoprotein domain family, member 1 K18757 LARP1; la-related protein 1
E 103070586 LARP1B; LOW QUALITY PROTEIN: la-related protein 1B K18757 LARP1; la-related protein 1
E 103079581 ATXN2L; ataxin-2-like protein isoform X1 K23625 ATXN2_2L; ataxin 2/2L
E 103088320 ATXN2; ataxin-2 K23625 ATXN2_2L; ataxin 2/2L
D P-body specific factors
E 103082110 DCP2; m7GpppN-mRNA hydrolase isoform X1 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 103074091 DCP1A; mRNA-decapping enzyme 1A isoform X1 K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 103076615 DCP1B; mRNA-decapping enzyme 1B K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 103075602 LSM1; U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 103074338 LSM2; U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 103070003 U6 snRNA-associated Sm-like protein LSm3-like K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 103090883 LSM3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 103086002 LSM4; U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 103088504 LSM5; U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 103091276 LSM6; U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 103083602 LSM7; U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 103086028 LSM8; U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 103081141 KLC4; kinesin light chain 4 isoform X1 K10407 KLC; kinesin light chain
E 103076644 KLC3; kinesin light chain 3 K10407 KLC; kinesin light chain
E 103080302 KLC1; kinesin light chain 1 isoform X1 K10407 KLC; kinesin light chain
E 103079326 KLC2; kinesin light chain 2 isoform X1 K10407 KLC; kinesin light chain
E 103089568 MYO5B; LOW QUALITY PROTEIN: unconventional myosin-Vb K10357 MYO5; myosin V
E 103089376 MYO5C; unconventional myosin-Vc K10357 MYO5; myosin V
E 103091126 MYO5A; unconventional myosin-Va K10357 MYO5; myosin V
E 103073687 tubulin alpha-3 chain-like K07374 TUBA; tubulin alpha
E 103072784 TUBA4A; tubulin alpha-4A chain isoform X1 K07374 TUBA; tubulin alpha
E 103082790 tubulin alpha-1D chain-like K07374 TUBA; tubulin alpha
E 103086172 tubulin alpha-1B chain-like K07374 TUBA; tubulin alpha
E 103075111 TUBAL3; LOW QUALITY PROTEIN: tubulin alpha chain-like 3 K07374 TUBA; tubulin alpha
E 103089420 TUBA8; tubulin alpha-8 chain isoform X1 K07374 TUBA; tubulin alpha
E 103088880 tubulin alpha-3 chain-like K07374 TUBA; tubulin alpha
E 103080842 TUBA1B; tubulin alpha-1B chain K07374 TUBA; tubulin alpha
E 103081399 TUBA1A; tubulin alpha-1A chain K07374 TUBA; tubulin alpha
E 103081669 TUBA1C; tubulin alpha-1C chain isoform X1 K07374 TUBA; tubulin alpha
E 103068326 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103073491 CPEB3; cytoplasmic polyadenylation element-binding protein 3 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103074205 cytoplasmic polyadenylation element-binding protein 2-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103080989 CPEB4; cytoplasmic polyadenylation element-binding protein 4 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 103073657 GEMIN5; gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5
E 103087603 TACC3; transforming acidic coiled-coil-containing protein 3 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 103081676 TNRC6B; trinucleotide repeat-containing gene 6B protein isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 103068316 TNRC6A; trinucleotide repeat-containing gene 6A protein isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 103073698 TNRC6C; trinucleotide repeat-containing gene 6C protein isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 103078807 CNOT1; CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 103077934 CNOT2; CCR4-NOT transcription complex subunit 2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 103084804 CNOT3; LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 3 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 103091154 CNOT4; CCR4-NOT transcription complex subunit 4 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 103069542 CNOT6L; CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 103074639 CNOT6; CCR4-NOT transcription complex subunit 6 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 103073211 CNOT8; CCR4-NOT transcription complex subunit 8 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 103090232 CNOT7; CCR4-NOT transcription complex subunit 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 103086243 uncharacterized protein KIAA0355 homolog K26671 GARRE1; granule associated Rac and RHOG effector protein 1
E 103084064 DIS3L2; DIS3-like exonuclease 2 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 103082456 PAN2; LOW QUALITY PROTEIN: PAB-dependent poly(A)-specific ribonuclease subunit 2 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 103080204 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E 103076131 BTG3; protein BTG3 K14443 TOB; protein Tob/BTG
E 103077357 TOB2; protein Tob2 K14443 TOB; protein Tob/BTG
E 103086874 BTG2; protein BTG2 K14443 TOB; protein Tob/BTG
E 103090103 protein BTG1-like K14443 TOB; protein Tob/BTG
E 103070867 BTG4; protein BTG4 K14443 TOB; protein Tob/BTG
E 103081890 TOB1; protein Tob1 isoform X1 K14443 TOB; protein Tob/BTG
E 103085696 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 103082849 PATL1; protein PAT1 homolog 1 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 103071235 EDC3; LOW QUALITY PROTEIN: enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 103083776 EDC4; enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 103070108 NANOS2; nanos homolog 2 K18760 NANOS2; protein nanos 2
E 103076959 NANOS3; nanos homolog 3 K18761 NANOS3; protein nanos 3
E 103069173 UPF2; regulator of nonsense transcripts 2 K14327 UPF2; regulator of nonsense transcripts 2
E 103075430 UPF3B; regulator of nonsense transcripts 3B isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 103075114 UPF3A; regulator of nonsense transcripts 3A K14328 UPF3; regulator of nonsense transcripts 3
E 103086841 TRIM21; E3 ubiquitin-protein ligase TRIM21 K10651 TRIM21; tripartite motif-containing protein 21 [EC:2.3.2.27]
E 103080332 TRIM71; E3 ubiquitin-protein ligase TRIM71 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 103072419 POLR2G; DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 103075964 EIF2AK2; interferon-induced, double-stranded RNA-activated protein kinase K16195 EIF2AK2; eukaryotic translation initiation factor 2-alpha kinase 2 [EC:2.7.11.1]
E 103076846 ZAR1L; ZAR1-like protein K18762 ZAR1; zygote arrest protein 1
E 103077367 ZAR1; zygote arrest protein 1 K18762 ZAR1; zygote arrest protein 1
E 103068349 YTHDF3; YTH domain-containing family protein 3 K20102 YTHDF; YTH domain-containing family protein
E 103083334 YTHDF2; YTH domain-containing family protein 2 isoform X1 K20102 YTHDF; YTH domain-containing family protein
E 103086474 YTHDF1; YTH domain-containing family protein 1 K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E 103091642 TIA1; nucleolysin TIA-1 isoform p40 isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 103070432 TIAL1; nucleolysin TIAR isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 103088623 PABPC4; polyadenylate-binding protein 4 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 103075279 PABPC5; polyadenylate-binding protein 5 K13126 PABPC; polyadenylate-binding protein
E 103086490 PABPC1; polyadenylate-binding protein 1 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 103078587 PABPC1L; polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 103090251 STAU1; double-stranded RNA-binding protein Staufen homolog 1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 103072837 STAU2; double-stranded RNA-binding protein Staufen homolog 2 K17597 STAU; double-stranded RNA-binding protein Staufen
E 103088381 FXR2; fragile X mental retardation syndrome-related protein 2 K15516 FMR; fragile X mental retardation protein
E 103081379 FMR1; fragile X mental retardation protein 1 homolog isoform X1 K15516 FMR; fragile X mental retardation protein
E 103075133 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 103087702 ZBP1; LOW QUALITY PROTEIN: z-DNA-binding protein 1 K12965 ZBP1; Z-DNA binding protein 1
E 103069565 ELAVL1; ELAV-like protein 1 K13088 ELAVL1; ELAV-like protein 1
E 103083593 ras GTPase-activating protein-binding protein 1-like K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3]
E 103073997 G3BP1; ras GTPase-activating protein-binding protein 1 K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3]
E 103075640 G3BP2; ras GTPase-activating protein-binding protein 2 isoform X1 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 103077098 EIF2A; eukaryotic translation initiation factor 2A isoform X1 K15026 EIF2A; translation initiation factor 2A
E 103088950 EIF3B; eukaryotic translation initiation factor 3 subunit B isoform X1 K03253 EIF3B; translation initiation factor 3 subunit B
E 103086924 EIF4A1; eukaryotic initiation factor 4A-I isoform X1 K03257 EIF4A; translation initiation factor 4A
E 103077428 EIF4A2; eukaryotic initiation factor 4A-II isoform X1 K03257 EIF4A; translation initiation factor 4A
E 103090422 EIF4A3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 103081992 EIF4B; eukaryotic translation initiation factor 4B K03258 EIF4B; translation initiation factor 4B
E 103086318 EIF4G1; eukaryotic translation initiation factor 4 gamma 1 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 103074768 EIF4G2; eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 103072575 RPS6KA6; ribosomal protein S6 kinase alpha-6 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 103086828 RPS6KA1; ribosomal protein S6 kinase alpha-1 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 103078586 RPS6KA2; ribosomal protein S6 kinase alpha-2 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 103087256 RPS6KA3; ribosomal protein S6 kinase alpha-3 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 103083605 GNB2L1; guanine nucleotide-binding protein subunit beta-2-like 1 K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 103088738 TRAF2; TNF receptor-associated factor 2 K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 103069667 nuclear RNA export factor 3-like K14284 NXF; nuclear RNA export factor
E 103078847 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
E 103068724 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
E 103072768 NXF1; nuclear RNA export factor 1 isoform X1 K14284 NXF; nuclear RNA export factor
E 103090438 nuclear RNA export factor 3-like K14284 NXF; nuclear RNA export factor
E 103074668 HDAC6; histone deacetylase 6 K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98]
E 103075745 tudor domain-containing protein 3-like isoform X1 K18404 TDRD3; tudor domain-containing protein 3
E 103070044 LARP4B; la-related protein 4B K18763 LARP4; la-related protein 4
E 103089948 LARP4; la-related protein 4 isoform X1 K18763 LARP4; la-related protein 4
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 103074091 DCP1A; mRNA-decapping enzyme 1A isoform X1 K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 103076615 DCP1B; mRNA-decapping enzyme 1B K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 103082110 DCP2; m7GpppN-mRNA hydrolase isoform X1 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 103089445 DDX6; probable ATP-dependent RNA helicase DDX6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 103071235 EDC3; LOW QUALITY PROTEIN: enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 103083776 EDC4; enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 103082849 PATL1; protein PAT1 homolog 1 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 103075602 LSM1; U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 103074338 LSM2; U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 103070003 U6 snRNA-associated Sm-like protein LSm3-like K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 103090883 LSM3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 103086002 LSM4; U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 103088504 LSM5; U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 103091276 LSM6; U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 103083602 LSM7; U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 103086028 LSM8; U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E 103082255 XRN1; 5'-3' exoribonuclease 1 isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 103072390 XRN2; 5'-3' exoribonuclease 2 isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 103090159 NUDT16; LOW QUALITY PROTEIN: U8 snoRNA-decapping enzyme K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64]
D Other 5'-3' decay factors
E 103078579 DCPS; m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 103074049 HELZ; probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
C 3'-5' decay
D Core exosome factors
E 103086080 EXOSC1; exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4
E 103072202 EXOSC2; exosome complex component RRP4 isoform X1 K03679 RRP4; exosome complex component RRP4
E 103073587 EXOSC3; exosome complex component RRP40 K03681 RRP40; exosome complex component RRP40
E 103082704 EXOSC4; exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41
E 103075004 EXOSC5; exosome complex component RRP46 K12590 RRP46; exosome complex component RRP46
E 103072771 EXOSC6; exosome complex component MTR3 K12587 MTR3; exosome complex component MTR3
E 103073704 EXOSC7; exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
E 103068827 EXOSC8; exosome complex component RRP43 K12586 RRP43; exosome complex component RRP43
E 103073708 EXOSC9; exosome complex component RRP45 K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 103081893 DIS3; exosome complex exonuclease RRP44 isoform X1 K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 103087043 DIS3L; DIS3-like exonuclease 1 K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-]
E 103076029 EXOSC10; exosome component 10 isoform X1 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 103069583 C1D; nuclear nucleic acid-binding protein C1D K12592 C1D; exosome complex protein LRP1
E 103070182 MPHOSPH6; M-phase phosphoprotein 6 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
E 103078278 DDX60; LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX60 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
D TRAMP complex
E 103078951 PAPD5; non-canonical poly(A) RNA polymerase PAPD5 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 103069908 PAPD7; non-canonical poly(A) RNA polymerase PAPD7 isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 103071112 ZCCHC7; zinc finger CCHC domain-containing protein 7 K12597 AIR1_2; protein AIR1/2
E 103077784 SKIV2L2; superkiller viralicidic activity 2-like 2 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 103070845 SKIV2L; helicase SKI2W isoform X1 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 103083555 TTC37; tetratricopeptide repeat protein 37 K12600 SKI3; superkiller protein 3
E 103068795 WDR61; WD repeat-containing protein 61 K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E 103069542 CNOT6L; CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 103074639 CNOT6; CCR4-NOT transcription complex subunit 6 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 103078807 CNOT1; CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 103077934 CNOT2; CCR4-NOT transcription complex subunit 2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 103084804 CNOT3; LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 3 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 103091154 CNOT4; CCR4-NOT transcription complex subunit 4 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 103073211 CNOT8; CCR4-NOT transcription complex subunit 8 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 103090232 CNOT7; CCR4-NOT transcription complex subunit 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 103083621 RQCD1; cell differentiation protein RCD1 homolog K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 103079527 CNOT10; CCR4-NOT transcription complex subunit 10 isoform X1 K12607 CNOT10; CCR4-NOT transcription complex subunit 10
D Pan complex
E 103082456 PAN2; LOW QUALITY PROTEIN: PAB-dependent poly(A)-specific ribonuclease subunit 2 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 103080204 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
D Other 3'-5' decay factors
E 103076055 PARN; poly(A)-specific ribonuclease PARN K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 103076640 PNLDC1; poly(A)-specific ribonuclease PARN-like domain-containing protein 1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 103087627 DHX36; probable ATP-dependent RNA helicase DHX36 isoform X1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 103076131 BTG3; protein BTG3 K14443 TOB; protein Tob/BTG
E 103077357 TOB2; protein Tob2 K14443 TOB; protein Tob/BTG
E 103086874 BTG2; protein BTG2 K14443 TOB; protein Tob/BTG
E 103090103 protein BTG1-like K14443 TOB; protein Tob/BTG
E 103070867 BTG4; protein BTG4 K14443 TOB; protein Tob/BTG
E 103081890 TOB1; protein Tob1 isoform X1 K14443 TOB; protein Tob/BTG
E 103089107 CSF2; granulocyte-macrophage colony-stimulating factor K05427 CSF2; granulocyte-macrophage colony-stimulating factor
E 103072303 CCRN4L; nocturnin isoform X1 K18764 NOCT; nocturnin [EC:3.1.3.108]
E 103070236 ERI2; ERI1 exoribonuclease 2 K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 103078579 DCPS; m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 103085961 LOW QUALITY PROTEIN: 2',5'-phosphodiesterase 12-like K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]
E 103087893 2',5'-phosphodiesterase 12-like K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]
E 103091639 IREB2; iron-responsive element-binding protein 2 K22416 IREB2; iron-responsive element-binding protein 2
E 103074049 HELZ; probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
E 103070123 HELZ2; LOW QUALITY PROTEIN: helicase with zinc finger 2, transcriptional coactivator K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6]
E 103081217 NRDE2; protein NRDE2 homolog K26109 NRDE2; nuclear exosome regulator NRDE2
E 103074916 SAMD4A; protein Smaug homolog 1 isoform X1 K27396 SMG; protein Smaug
E 103088971 SAMD4B; LOW QUALITY PROTEIN: sterile alpha motif domain containing 4B K27396 SMG; protein Smaug
E 103070548 FOCAD; focadhesin isoform X1 K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
E 103086007 RNASE1; ribonuclease pancreatic K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 103086288 RNASE2; non-secretory ribonuclease K10787 RNASE3; eosinophil cationic protein [EC:3.1.27.-]
E 103085448 RNASE4; ribonuclease 4 K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-]
E 103069515 RNASE7; ribonuclease 7 K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 103085726 RNASE6; ribonuclease K6 K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 103073663 ZC3H12A; ribonuclease ZC3H12A K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 103074865 ZC3H12C; probable ribonuclease ZC3H12C isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 103086770 ZC3H12B; probable ribonuclease ZC3H12B K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 103077544 ZC3H12D; probable ribonuclease ZC3H12D K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 103084849 DROSHA; ribonuclease 3 isoform X1 K03685 rnc; ribonuclease III [EC:3.1.26.3]
E 103088811 REXO2; oligoribonuclease, mitochondrial K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
D Other RNA degradosome components
E 103082581 ENO1; alpha-enolase isoform X1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 103087527 ENO2; gamma-enolase isoform X1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 103090227 ENO3; beta-enolase isoform X1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 103086206 PNPT1; polyribonucleotide nucleotidyltransferase 1, mitochondrial K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 103082377 PFKM; 6-phosphofructokinase, muscle type isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 103081400 PFKL; 6-phosphofructokinase, liver type K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 103070954 PFKP; 6-phosphofructokinase type C K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E 103091225 HSPA9; stress-70 protein, mitochondrial K04043 dnaK; molecular chaperone DnaK
E 103078520 60 kDa heat shock protein, mitochondrial-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 103073897 HSPD1; 60 kDa heat shock protein, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 103072202 EXOSC2; exosome complex component RRP4 isoform X1 K03679 RRP4; exosome complex component RRP4
E 103086080 EXOSC1; exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4
D Cofactors
E 103082704 EXOSC4; exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41
E 103073704 EXOSC7; exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
D Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024