+D GENES KO #

  KEGG Orthology (KO) - Mesorhizobium ciceri CC1192

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:mcic00010] D A4R28_24630 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D A4R28_01150 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D A4R28_27760 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A4R28_26310 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D A4R28_05665 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D A4R28_05985 glpX; fructose 1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D A4R28_19725 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A4R28_01095 aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A4R28_01210 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A4R28_05650 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A4R28_07245 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D A4R28_19710 gapA; erythrose-4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A4R28_19720 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D A4R28_24645 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A4R28_08140 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A4R28_19930 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D A4R28_02130 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D A4R28_08130 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D A4R28_08125 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D A4R28_08120 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A4R28_19370 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A4R28_08110 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23985 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_06210 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D A4R28_16375 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D A4R28_09470 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D A4R28_30780 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_00140 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_13975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_24900 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_22610 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A4R28_26855 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D A4R28_01020 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D A4R28_09590 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D A4R28_02380 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D A4R28_33035 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A4R28_02450 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A4R28_23125 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D A4R28_26025 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:mcic00020] D A4R28_07180 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D A4R28_20010 citrate synthase/methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D A4R28_20015 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D A4R28_23555 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D A4R28_05190 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D A4R28_23455 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D A4R28_23450 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D A4R28_08110 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23985 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23460 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D A4R28_23470 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D A4R28_23330 fumarate reductase (quinol) flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D A4R28_23325 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D A4R28_23340 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D A4R28_23335 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D A4R28_21405 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D A4R28_03835 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D A4R28_23475 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D A4R28_20470 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D A4R28_26025 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D A4R28_08130 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D A4R28_08125 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D A4R28_08120 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A4R28_19370 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:mcic00030] D A4R28_27760 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A4R28_29220 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D A4R28_23120 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D A4R28_29215 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D A4R28_00785 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D A4R28_18200 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D A4R28_23115 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D A4R28_01145 D-allulose-6-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D A4R28_05630 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D A4R28_24815 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D A4R28_05655 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D A4R28_19705 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D A4R28_22560 fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D A4R28_07510 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D A4R28_04980 Fe-S cluster assembly protein HesB K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D A4R28_07890 phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D A4R28_24905 2-deoxyribose-5-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D A4R28_05015 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D A4R28_17900 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D A4R28_19895 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D A4R28_28405 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D A4R28_02380 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D A4R28_33035 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A4R28_02450 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A4R28_25825 phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23] D A4R28_15855 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D A4R28_29210 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D A4R28_17170 keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D A4R28_10815 glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D A4R28_23090 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D A4R28_23530 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D A4R28_06640 GMC family oxidoreductase K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3] D A4R28_06645 gluconate 2-dehydrogenase K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3] D A4R28_12375 gluconate kinase K00851 idnK; gluconokinase [EC:2.7.1.12] D A4R28_09585 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D A4R28_26560 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D A4R28_19725 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A4R28_01095 aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A4R28_01210 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A4R28_05650 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A4R28_05665 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D A4R28_05985 glpX; fructose 1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D A4R28_26310 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:mcic00040] D A4R28_22475 cupin K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25] D A4R28_22485 5-dehydro-4-deoxy-D-glucuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D A4R28_22480 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D A4R28_22510 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D A4R28_29585 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D A4R28_22515 mannitol dehydrogenase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D A4R28_27190 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D A4R28_27240 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A4R28_17260 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A4R28_00460 carbohydrate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53] D A4R28_18495 carbohydrate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53] D A4R28_01145 D-allulose-6-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D A4R28_05630 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D A4R28_24815 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D A4R28_26285 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D A4R28_29390 carbohydrate kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D A4R28_26275 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D A4R28_19870 hypothetical protein K01805 xylA; xylose isomerase [EC:5.3.1.5] D A4R28_28890 sugar isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-] D A4R28_04440 sugar ABC transporter K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15] D A4R28_01005 3-oxoacyl-ACP reductase K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175] D A4R28_27725 dihydroxy-acid dehydratase K22186 xylD; xylonate dehydratase [EC:4.2.1.82] D A4R28_27000 aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-] D A4R28_25620 ribulokinase K00875 rbtK; D-ribulokinase [EC:2.7.1.47] D A4R28_13100 ribulokinase K00875 rbtK; D-ribulokinase [EC:2.7.1.47] D A4R28_19275 carbohydrate kinase K22935 XK1; D-ribulokinase [EC:2.7.1.47] D A4R28_13105 glucose dehydrogenase K00039 rbtD; ribitol 2-dehydrogenase [EC:1.1.1.56] D A4R28_27060 fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:mcic00051] D A4R28_02330 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D A4R28_33035 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A4R28_02450 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A4R28_27060 fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D A4R28_31720 hypothetical protein K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D A4R28_04975 pyridoxal 4-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D A4R28_18235 pyridoxal 4-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D A4R28_24895 NAD(P)-dependent oxidoreductase K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434] D A4R28_26875 3-oxoacyl-ACP reductase K21883 lra5; 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) [EC:1.1.1.401] D A4R28_27025 3-oxoacyl-ACP reductase K21883 lra5; 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) [EC:1.1.1.401] D A4R28_28890 sugar isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-] D A4R28_26310 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D A4R28_05665 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D A4R28_05985 glpX; fructose 1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D A4R28_26275 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D A4R28_19870 hypothetical protein K01805 xylA; xylose isomerase [EC:5.3.1.5] D A4R28_25630 mannitol dehydrogenase K00045 E1.1.1.67; mannitol 2-dehydrogenase [EC:1.1.1.67] D A4R28_19725 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A4R28_01095 aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A4R28_01210 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A4R28_05650 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A4R28_07245 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D A4R28_26045 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D A4R28_22635 glycerol-3-phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50] D A4R28_19300 PTS cellobiose transporter subunit IIB K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D A4R28_19305 PTS sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D A4R28_19310 PTS beta-glucoside transporter subunit IIABC K02783 srlA; glucitol/sorbitol PTS system EIIC component C 00052 Galactose metabolism [PATH:mcic00052] D A4R28_26855 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D A4R28_01020 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D A4R28_09590 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D A4R28_28835 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D A4R28_27240 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A4R28_17260 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A4R28_02380 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D A4R28_33035 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A4R28_02450 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A4R28_24630 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D A4R28_01150 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D A4R28_32510 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D A4R28_28970 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22] D A4R28_28995 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22] D A4R28_29140 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D A4R28_29135 PTS galactitol transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D A4R28_29145 DNA mismatch repair protein MutT K02775 gatC; galactitol PTS system EIIC component D A4R28_25635 sorbitol dehydrogenase K21620 sorbD; galactitol 2-dehydrogenase [EC:1.1.1.16] D A4R28_29355 sugar kinase K21621 fk; tagatose kinase [EC:2.7.1.101] D A4R28_29350 tagatose-bisphosphate aldolase K21622 tag6PK; D-tagatose 6-phosphate 4-epimerase [EC:5.1.3.40] D A4R28_26310 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D A4R28_08495 galactose 1-dehydrogenase K00035 gal; D-galactose 1-dehydrogenase [EC:1.1.1.48] D A4R28_24735 3-oxoacyl-ACP reductase K22215 galD; galactose dehydrogenase [EC:1.1.1.48 1.1.1.120] D A4R28_26830 D-galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D A4R28_15635 isomerase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D A4R28_24740 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D A4R28_24745 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] D A4R28_26400 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D A4R28_02390 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:mcic00053] D A4R28_27190 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D A4R28_23090 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D A4R28_23530 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D A4R28_31720 hypothetical protein K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D A4R28_04975 pyridoxal 4-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D A4R28_18235 pyridoxal 4-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D A4R28_02180 capsular biosynthesis protein CpsI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D A4R28_00460 carbohydrate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53] D A4R28_18495 carbohydrate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53] D A4R28_30780 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_00140 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_13975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_24900 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_01455 chloromuconate cycloisomerase K01706 gudD; glucarate dehydratase [EC:4.2.1.40] D A4R28_26865 dihydroxy-acid dehydratase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25] D A4R28_01010 dihydroxy-acid dehydratase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25] D A4R28_31740 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41] D A4R28_31750 epimerase K18981 udh; uronate dehydrogenase [EC:1.1.1.203] D A4R28_14760 NAD-dependent dehydratase K18981 udh; uronate dehydrogenase [EC:1.1.1.203] C 00500 Starch and sucrose metabolism [PATH:mcic00500] D A4R28_26400 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D A4R28_02390 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D A4R28_27240 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A4R28_17260 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A4R28_20235 glycosyl hydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D A4R28_33065 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D A4R28_02370 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D A4R28_02375 starch synthase K00703 glgA; starch synthase [EC:2.4.1.21] D A4R28_02365 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D A4R28_02360 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D A4R28_02385 glycogen debranching enzyme K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196] D A4R28_23110 glucan 1,4-alpha-glucosidase K01178 SGA1; glucoamylase [EC:3.2.1.3] D A4R28_12205 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D A4R28_12200 trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D A4R28_02380 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D A4R28_33035 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A4R28_02450 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A4R28_24630 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D A4R28_01150 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D A4R28_27760 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A4R28_02330 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:mcic00520] D A4R28_09130 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D A4R28_24835 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D A4R28_24850 N-acetylglucosamine kinase K18676 gspK; glucosamine kinase [EC:2.7.1.8] D A4R28_02330 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D A4R28_31835 sugar isomerase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D A4R28_06380 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D A4R28_24840 aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D A4R28_20170 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D A4R28_06375 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D A4R28_24855 N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D A4R28_01175 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D A4R28_26065 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D A4R28_26070 mannose-1-phosphate guanylyltransferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D A4R28_29035 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D A4R28_11010 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D A4R28_14510 N-acetylmannosamine kinase K13967 nanEK; N-acetylmannosamine-6-phosphate 2-epimerase / N-acetylmannosamine kinase [EC:5.1.3.9 2.7.1.60] D A4R28_30060 NAD-dependent dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D A4R28_03435 NAD-dependent dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D A4R28_08740 UDP-glucose 4-epimerase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D A4R28_03430 UDP-glucose 4-epimerase GalE K12448 UXE; UDP-arabinose 4-epimerase [EC:5.1.3.5] D A4R28_24630 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D A4R28_01150 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D A4R28_23125 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D A4R28_02380 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D A4R28_33035 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A4R28_02450 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A4R28_27240 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A4R28_17260 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A4R28_27190 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D A4R28_28835 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D A4R28_32510 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D A4R28_02180 capsular biosynthesis protein CpsI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D A4R28_26045 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D A4R28_27760 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A4R28_33065 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D A4R28_30090 CDP-paratose 2-epimerase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10] D A4R28_02370 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:mcic00620] D A4R28_22610 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A4R28_08130 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D A4R28_08125 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D A4R28_08120 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A4R28_19370 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A4R28_08110 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23985 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_09470 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D A4R28_06210 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D A4R28_16375 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D A4R28_07885 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A4R28_19930 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D A4R28_19190 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D A4R28_00105 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A4R28_08825 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A4R28_00100 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D A4R28_08830 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D A4R28_26110 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D A4R28_02855 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D A4R28_30780 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_00140 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_13975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_24900 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_17365 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D A4R28_29785 lldD; alpha-hydroxy-acid oxidizing enzyme K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D A4R28_15930 alpha-hydroxy-acid oxidizing enzyme K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D A4R28_29970 pyruvate oxidase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D A4R28_10770 lactate dehydrogenase K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4] D A4R28_30870 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D A4R28_31780 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D A4R28_06660 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D A4R28_08960 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D A4R28_15775 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D A4R28_19075 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D A4R28_28035 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D A4R28_27475 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D A4R28_06475 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D A4R28_20470 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D A4R28_23475 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D A4R28_21405 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D A4R28_03835 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D A4R28_26025 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D A4R28_02130 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D A4R28_24710 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D A4R28_28575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_02485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_20025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_03110 citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D A4R28_16245 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:mcic00630] D A4R28_29275 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D A4R28_22610 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A4R28_24710 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D A4R28_23475 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D A4R28_07180 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D A4R28_20010 citrate synthase/methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D A4R28_20015 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D A4R28_23555 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D A4R28_28575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_02485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_20025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_20030 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D A4R28_10245 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D A4R28_06215 acetyl/propionyl-CoA carboxylase subuit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D A4R28_08255 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D A4R28_02510 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D A4R28_02515 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D A4R28_21445 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2] D A4R28_29800 glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D A4R28_29805 2-hydroxy-acid oxidase K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D A4R28_29810 2-hydroxy-acid oxidase K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D A4R28_29995 catalase HPII K03781 katE; catalase [EC:1.11.1.6] D A4R28_28360 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D A4R28_28035 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D A4R28_27765 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D A4R28_05620 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D A4R28_07505 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D A4R28_05645 rbcL; ribulose 1,5-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D A4R28_05640 ribulose 1,5-bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D A4R28_16470 serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D A4R28_26575 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_29255 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_29610 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_01200 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_08275 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_08280 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_17470 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_22970 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_04650 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A4R28_16460 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A4R28_21060 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A4R28_06155 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D A4R28_01295 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A4R28_01365 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A4R28_06165 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A4R28_16485 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A4R28_24930 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A4R28_08110 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23985 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_06160 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D A4R28_08620 glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47] D A4R28_08615 hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D A4R28_08610 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D A4R28_14675 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D A4R28_26560 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D A4R28_30870 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D A4R28_17170 keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D A4R28_27670 formate dehydrogenase K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D A4R28_27680 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D A4R28_27685 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D A4R28_27690 formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma D A4R28_00175 esterase K01432 AFMID; arylformamidase [EC:3.5.1.9] D A4R28_07215 esterase K01432 AFMID; arylformamidase [EC:3.5.1.9] D A4R28_12550 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D A4R28_16475 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D A4R28_04405 N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] C 00640 Propanoate metabolism [PATH:mcic00640] D A4R28_22610 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A4R28_27260 prpE; propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D A4R28_17365 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D A4R28_07885 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A4R28_24000 2-oxoisovalerate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D A4R28_23995 2-oxoisovalerate dehydrogenase K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D A4R28_27085 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D A4R28_23990 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D A4R28_08110 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23985 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_18020 NADPH:quinone dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D A4R28_28395 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A4R28_28580 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A4R28_19190 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D A4R28_00105 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A4R28_08825 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A4R28_00100 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D A4R28_08830 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D A4R28_26110 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D A4R28_28175 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D A4R28_12170 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D A4R28_06215 acetyl/propionyl-CoA carboxylase subuit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D A4R28_08255 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D A4R28_10245 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D A4R28_02510 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D A4R28_02515 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D A4R28_23470 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D A4R28_23460 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D A4R28_20530 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00650 Butanoate metabolism [PATH:mcic00650] D A4R28_28575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_02485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_20025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_18845 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D A4R28_23065 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D A4R28_28580 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A4R28_28395 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A4R28_03740 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D A4R28_17370 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D A4R28_05960 class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D A4R28_24130 esterase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D A4R28_20030 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D A4R28_22955 3-oxoadipate--succinyl-CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D A4R28_22950 3-oxoadipate--succinyl-CoA transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D A4R28_29705 ectoine utilization protein EutA K01799 nicE; maleate isomerase [EC:5.2.1.1] D A4R28_06185 Asp/Glu racemase K01799 nicE; maleate isomerase [EC:5.2.1.1] D A4R28_23330 fumarate reductase (quinol) flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D A4R28_23325 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D A4R28_23340 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D A4R28_23335 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D A4R28_28175 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D A4R28_00055 aminotransferase K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96] D A4R28_00180 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4R28_09595 gabD; succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4R28_21410 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4R28_21565 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4R28_29315 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D A4R28_19390 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D A4R28_20005 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D A4R28_19395 acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4] D A4R28_31710 serine hydrolase K18372 acmB; methyl acetate hydrolase [EC:3.1.1.114] D A4R28_26795 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_00860 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_10560 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_10715 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_12100 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_14740 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_19140 decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_10555 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D A4R28_29405 3-ketoacyl-ACP reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] D A4R28_29580 oxidoreductase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:mcic00660] D A4R28_26795 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_00860 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_10560 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_10715 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_12100 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_14740 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_19140 decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_10555 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D A4R28_21440 carnitine dehydratase K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22] D A4R28_23470 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D A4R28_23460 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D A4R28_21445 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2] D A4R28_23370 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D A4R28_23765 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D A4R28_00130 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D A4R28_23745 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:mcic00562] D A4R28_04175 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D A4R28_20320 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D A4R28_30045 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D A4R28_25895 inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D A4R28_22140 xylose isomerase K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11] D A4R28_25850 myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44] D A4R28_25855 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D A4R28_25840 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D A4R28_25860 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D A4R28_20530 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D A4R28_07245 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:mcic00190] D A4R28_10330 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D A4R28_10325 NADH dehydrogenase K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D A4R28_10320 NADH dehydrogenase K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D A4R28_07930 NADH dehydrogenase K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D A4R28_10315 NADH dehydrogenase K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D A4R28_10300 NADH-ubiquinone dehydrogenase K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D A4R28_10310 NADH dehydrogenase K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D A4R28_10305 NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D A4R28_10295 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D A4R28_10290 NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D A4R28_10285 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D A4R28_10280 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D A4R28_10275 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D A4R28_10270 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D A4R28_10265 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D A4R28_10260 NADH:ubiquinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D A4R28_08185 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D A4R28_23330 fumarate reductase (quinol) flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D A4R28_23325 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D A4R28_23340 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D A4R28_23335 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D A4R28_31600 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D A4R28_15950 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D A4R28_31605 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D A4R28_15945 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D A4R28_15940 ribosomal protein P2 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D A4R28_01960 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D A4R28_31420 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D A4R28_08020 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D A4R28_01970 cytochrome B562 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D A4R28_32460 cytochrome C oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D A4R28_32455 cytochrome ubiquinol oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D A4R28_01955 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D A4R28_29955 cytochrome ubiquinol oxidase subunit I K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9] D A4R28_29960 cytochrome C oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D A4R28_32450 cytochrome C oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D A4R28_01950 cytochrome C oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D A4R28_01965 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D A4R28_04840 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D A4R28_30260 peptidase S41 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D A4R28_20715 peptidase S41 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D A4R28_30265 peptidase S41 K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D A4R28_20710 peptidase S41 K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D A4R28_30270 nitrogen fixation protein FixQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D A4R28_20705 nitrogen fixation protein FixQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D A4R28_30275 cytochrome C oxidase Cbb3 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D A4R28_20700 cytochrome C oxidase Cbb3 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D A4R28_32445 cytochrome C K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D A4R28_31415 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D A4R28_08015 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D A4R28_31410 cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D A4R28_08010 cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D A4R28_31405 cytochrome ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D A4R28_08005 cytochrome ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D A4R28_24305 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D A4R28_24300 cytochrome BD ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D A4R28_28065 cytochrome C K08738 CYC; cytochrome c D A4R28_05615 cytochrome C K08738 CYC; cytochrome c D A4R28_16100 cytochrome C K08738 CYC; cytochrome c D A4R28_22535 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D A4R28_22525 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D A4R28_22530 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D A4R28_22540 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D A4R28_22520 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D A4R28_01635 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D A4R28_01645 ATP F0F1 synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b D A4R28_01650 ATP F0F1 synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D A4R28_01640 ATP F0F1 synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D A4R28_22730 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D A4R28_03815 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D A4R28_28625 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D A4R28_04605 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:mcic00710] D A4R28_05645 rbcL; ribulose 1,5-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D A4R28_05640 ribulose 1,5-bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D A4R28_19720 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D A4R28_19710 gapA; erythrose-4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A4R28_19725 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A4R28_01095 aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A4R28_01210 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A4R28_05650 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A4R28_05665 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D A4R28_05985 glpX; fructose 1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D A4R28_05655 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D A4R28_19705 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D A4R28_07510 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D A4R28_05660 phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D A4R28_07245 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D A4R28_01145 D-allulose-6-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D A4R28_05630 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D A4R28_24815 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D A4R28_22560 fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D A4R28_26025 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D A4R28_02130 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D A4R28_27475 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D A4R28_06475 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D A4R28_23475 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:mcic00720] D A4R28_02130 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D A4R28_20470 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D A4R28_23475 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D A4R28_21405 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D A4R28_03835 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D A4R28_23330 fumarate reductase (quinol) flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D A4R28_23325 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D A4R28_23340 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D A4R28_23335 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D A4R28_23460 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D A4R28_23470 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D A4R28_28575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_02485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_20025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_05190 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D A4R28_23555 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D A4R28_19190 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D A4R28_00105 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A4R28_08825 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A4R28_00100 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D A4R28_08830 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D A4R28_26110 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D A4R28_10245 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D A4R28_02510 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D A4R28_02515 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D A4R28_16130 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D A4R28_29195 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D A4R28_29815 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D A4R28_09910 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D A4R28_12025 methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D A4R28_16480 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D A4R28_07885 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A4R28_22610 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:mcic00680] D A4R28_32435 methanol dehydrogenase K23995 xoxF; lanthanide-dependent methanol dehydrogenase [EC:1.1.2.10] D A4R28_05575 methanol dehydrogenase K23995 xoxF; lanthanide-dependent methanol dehydrogenase [EC:1.1.2.10] D A4R28_06210 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D A4R28_16375 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D A4R28_05800 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D A4R28_16370 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D A4R28_27680 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D A4R28_27685 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D A4R28_27690 formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma D A4R28_27670 formate dehydrogenase K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D A4R28_04650 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A4R28_16460 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A4R28_21060 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A4R28_16470 serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D A4R28_26560 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D A4R28_08140 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A4R28_23475 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D A4R28_19725 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A4R28_01095 aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A4R28_01210 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A4R28_05650 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A4R28_05665 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D A4R28_05985 glpX; fructose 1,6-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D A4R28_26310 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D A4R28_04980 Fe-S cluster assembly protein HesB K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D A4R28_14440 NADH:flavin oxidoreductase K00317 dmd-tmd; dimethylamine/trimethylamine dehydrogenase [EC:1.5.8.1 1.5.8.2] D A4R28_01390 potassium transporter K18277 tmm; trimethylamine monooxygenase [EC:1.14.13.148] D A4R28_01335 glutamine amidotransferase K22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21] D A4R28_01330 protein GlxC K22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21] D A4R28_01325 glutamate synthase K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21] D A4R28_01315 sarcosine oxidase subunit beta K22084 mgdA; methylglutamate dehydrogenase subunit A [EC:1.5.99.5] D A4R28_10050 sarcosine oxidase subunit beta K22084 mgdA; methylglutamate dehydrogenase subunit A [EC:1.5.99.5] D A4R28_01310 sarcosine oxidase subunit delta K22085 mgdB; methylglutamate dehydrogenase subunit B [EC:1.5.99.5] D A4R28_10055 sarcosine oxidase subunit delta K22085 mgdB; methylglutamate dehydrogenase subunit B [EC:1.5.99.5] D A4R28_01305 sarcosine oxidase subunit alpha K22086 mgdC; methylglutamate dehydrogenase subunit C [EC:1.5.99.5] D A4R28_10060 sarcosine oxidase subunit alpha family protein K22086 mgdC; methylglutamate dehydrogenase subunit C [EC:1.5.99.5] D A4R28_01300 sarcosine oxidase subunit gamma K22087 mgdD; methylglutamate dehydrogenase subunit D [EC:1.5.99.5] D A4R28_10065 sarcosine oxidase subunit gamma K22087 mgdD; methylglutamate dehydrogenase subunit D [EC:1.5.99.5] D A4R28_05785 formylmethanofuran dehydrogenase subunit A K00200 fwdA; formylmethanofuran dehydrogenase subunit A [EC:1.2.7.12] D A4R28_05780 tungsten formylmethanofuran dehydrogenase K00201 fwdB; formylmethanofuran dehydrogenase subunit B [EC:1.2.7.12] D A4R28_05795 formylmethanofuran dehydrogenase subunit C K00202 fwdC; formylmethanofuran dehydrogenase subunit C [EC:1.2.7.12] D A4R28_05790 formylmethanofuran--tetrahydromethanopterin N-formyltransferase K00672 ftr; formylmethanofuran--tetrahydromethanopterin N-formyltransferase [EC:2.3.1.101] D A4R28_05755 methenyltetrahydromethanopterin cyclohydrolase K01499 mch; methenyltetrahydromethanopterin cyclohydrolase [EC:3.5.4.27] D A4R28_05765 methylenetetrahydromethanopterin dehydrogenase K10714 mtdB; methylene-tetrahydromethanopterin dehydrogenase [EC:1.5.1.-] D A4R28_05740 aldehyde-activating protein K10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147] D A4R28_07885 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D A4R28_22610 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A4R28_24645 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A4R28_18365 dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D A4R28_20150 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D A4R28_00670 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D A4R28_20155 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D A4R28_10625 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D A4R28_27750 methyltransferase K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250] D A4R28_04245 trimethylamine methyltransferase K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250] D A4R28_09760 methyltransferase K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250] D A4R28_09870 trimethylamine methyltransferase K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250] D A4R28_10865 trimethylamine methyltransferase K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250] D A4R28_12270 methyltransferase K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250] D A4R28_05730 hypothetical protein K07072 mfnF; (4-(4-[2-(gamma-L-glutamylamino)ethyl]phenoxymethyl)furan-2-yl)methanamine synthase [EC:2.5.1.131] C 00910 Nitrogen metabolism [PATH:mcic00910] D A4R28_14410 nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein D A4R28_14405 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D A4R28_14390 nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D A4R28_14400 nitrite reductase large subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4] D A4R28_14395 tRNA-(guanine-N1)-methyltransferase K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4] D A4R28_30300 nitrite reductase, copper-containing K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1] D A4R28_21930 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D A4R28_21925 nitrogenase molybdenum-iron protein subunit beta K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D A4R28_21935 nifH; nitrogenase reductase K02588 nifH; nitrogenase iron protein NifH D A4R28_22675 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D A4R28_26575 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_29255 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_29610 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_01200 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_08275 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_08280 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_17470 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_22970 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_17280 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D A4R28_17275 gltD; glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D A4R28_22225 gltD; glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D A4R28_22775 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D A4R28_21940 carbonate dehydratase K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:mcic00920] D A4R28_12345 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D A4R28_12325 sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D A4R28_12330 sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein D A4R28_12335 cysW; sulfate/thiosulfate transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein D A4R28_12340 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D A4R28_24180 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D A4R28_24170 taurine ABC transporter permease K15552 tauC; taurine transport system permease protein D A4R28_24175 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D A4R28_03610 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D A4R28_13290 bicyclomycin resistance protein K15553 ssuA; sulfonate transport system substrate-binding protein D A4R28_24160 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D A4R28_03620 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D A4R28_13300 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D A4R28_24150 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D A4R28_03615 mannosyltransferase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D A4R28_13295 ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D A4R28_24145 aliphatic sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D A4R28_26915 alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D A4R28_22915 hypothetical protein K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D A4R28_24155 alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D A4R28_26960 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D A4R28_02315 adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D A4R28_02310 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D A4R28_02320 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D A4R28_18070 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D A4R28_28515 formate dehydrogenase K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6] D A4R28_28510 ferredoxin K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB D A4R28_28505 DMSO reductase K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC D A4R28_05585 quinoprotein dehydrogenase-associated SoxYZ-like carrier K17226 soxY; sulfur-oxidizing protein SoxY D A4R28_18075 sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D A4R28_08225 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D A4R28_08935 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D A4R28_08235 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D A4R28_24535 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D A4R28_24680 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D A4R28_19035 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D A4R28_28675 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D A4R28_26925 dimethyl sulfone monooxygenase SfnG K17228 sfnG; dimethylsulfone monooxygenase [EC:1.14.14.35] D A4R28_01270 acyl-CoA synthetase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D A4R28_02155 long-chain fatty acid--CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D A4R28_28565 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D A4R28_01805 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:mcic00061] D A4R28_19190 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D A4R28_00105 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A4R28_08825 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A4R28_00100 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D A4R28_08830 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D A4R28_26110 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D A4R28_03320 acyl carrier protein K02078 acpP; acyl carrier protein D A4R28_03310 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D A4R28_04750 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D A4R28_20990 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D A4R28_28335 beta-ketoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D A4R28_31175 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D A4R28_03325 beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A4R28_09635 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A4R28_09640 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A4R28_25555 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A4R28_29225 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_00135 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_03315 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_05035 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_06480 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_07475 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_13465 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_16200 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_25165 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_28340 beta-hydroxydecanoyl-ACP dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D A4R28_07160 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D A4R28_28330 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D A4R28_01830 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D A4R28_27775 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D A4R28_30465 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:mcic00071] D A4R28_28575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_02485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_20025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_28580 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A4R28_28395 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A4R28_23065 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D A4R28_26240 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D A4R28_27845 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D A4R28_17530 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D A4R28_28570 acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8] D A4R28_16760 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D A4R28_27775 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D A4R28_30465 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D A4R28_03185 2-acyl-glycerophospho-ethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D A4R28_25930 ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D A4R28_28180 pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D A4R28_06210 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D A4R28_16375 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D A4R28_09470 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D A4R28_30780 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_00140 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_13975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_24900 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:mcic00561] D A4R28_26560 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D A4R28_30780 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_00140 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_13975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_24900 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_27290 dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D A4R28_00530 dihydroxyacetone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D A4R28_27315 dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D A4R28_00525 dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D A4R28_27310 PTS mannose transporter subunit IID K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D A4R28_06890 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D A4R28_04745 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D A4R28_06945 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D A4R28_18995 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D A4R28_06420 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D A4R28_15805 alpha-mannosyltransferase K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] D A4R28_28970 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22] D A4R28_28995 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:mcic00564] D A4R28_23185 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D A4R28_00470 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D A4R28_06855 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D A4R28_18505 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D A4R28_06945 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D A4R28_18995 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D A4R28_06420 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D A4R28_17295 lysophospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5] D A4R28_04865 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D A4R28_08175 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D A4R28_03185 2-acyl-glycerophospho-ethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D A4R28_24790 SAM-dependent methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71] D A4R28_04010 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D A4R28_07140 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D A4R28_07580 phosphatidylcholine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24] D A4R28_03180 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D A4R28_03175 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D A4R28_04035 CDP-alcohol phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D A4R28_03500 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D A4R28_32575 cardiolipin synthase B K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D A4R28_16705 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D A4R28_03670 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] D A4R28_11990 S-adenosylmethionine--diacylglycerol 3-amino-3-carboxypropyl transferase K13622 btaA; S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase D A4R28_11995 methyltransferase K13623 btaB; S-adenosylmethionine-diacylgycerolhomoserine-N-methlytransferase C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:mcic00600] D A4R28_28670 ceramide glucosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80] D A4R28_28970 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22] D A4R28_28995 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids [PATH:mcic01040] D A4R28_23595 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D A4R28_23275 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D A4R28_15620 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:mcic00230] D A4R28_28405 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D A4R28_02380 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D A4R28_33035 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A4R28_02450 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A4R28_15855 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D A4R28_03250 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D A4R28_01790 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D A4R28_03660 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D A4R28_05255 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D A4R28_05295 phosphoribosylformylglycinamidine synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D A4R28_05285 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D A4R28_03665 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D A4R28_19905 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D A4R28_19900 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D A4R28_05300 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D A4R28_15625 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D A4R28_05330 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D A4R28_22660 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D A4R28_15925 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D A4R28_17225 multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D A4R28_09095 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D A4R28_19335 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D A4R28_32390 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D A4R28_17740 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D A4R28_06630 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D A4R28_15840 polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D A4R28_18955 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D A4R28_04495 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D A4R28_03520 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D A4R28_24570 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D A4R28_05835 xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D A4R28_26515 xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D A4R28_26520 xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D A4R28_07730 xanthine dehydrogenase K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D A4R28_13220 dehydrogenase K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D A4R28_13235 oxidoreductase K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D A4R28_07735 FAD-binding molybdopterin dehydrogenase K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D A4R28_13215 molybdopterin dehydrogenase K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D A4R28_13230 FAD-binding molybdopterin dehydrogenase K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D A4R28_07740 oxidoreductase K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D A4R28_13210 (2Fe-2S)-binding protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D A4R28_13225 (2Fe-2S)-binding protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D A4R28_29920 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D A4R28_23150 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D A4R28_26550 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D A4R28_03340 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D A4R28_05820 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D A4R28_09145 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D A4R28_03045 hydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D A4R28_02940 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D A4R28_03820 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D A4R28_04480 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D A4R28_24425 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D A4R28_20135 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D A4R28_17760 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D A4R28_02795 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D A4R28_08990 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D A4R28_08180 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D A4R28_20405 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D A4R28_08355 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D A4R28_08035 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D A4R28_02315 adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D A4R28_02310 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D A4R28_26510 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D A4R28_26505 polysaccharide deacetylase K16842 hpxB; allantoinase [EC:3.5.2.5] D A4R28_26500 (S)-ureidoglycine aminohydrolase K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26] D A4R28_26495 Ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3] D A4R28_25710 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D A4R28_25725 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D A4R28_25740 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:mcic00240] D A4R28_15295 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D A4R28_15215 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D A4R28_06955 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D A4R28_03055 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D A4R28_06950 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D A4R28_23940 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D A4R28_28785 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D A4R28_02945 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D A4R28_24780 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D A4R28_07125 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D A4R28_03520 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D A4R28_08035 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D A4R28_29005 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D A4R28_24070 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D A4R28_07260 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D A4R28_26810 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D A4R28_17225 multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D A4R28_09095 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D A4R28_19335 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D A4R28_32390 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D A4R28_17755 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D A4R28_08180 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D A4R28_20405 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D A4R28_05160 pseudouridine-5-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70] D A4R28_17735 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D A4R28_27570 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D A4R28_10120 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D A4R28_28680 2-deoxycytidine 5-triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D A4R28_05820 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D A4R28_03045 hydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D A4R28_07670 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D A4R28_27520 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D A4R28_17745 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D A4R28_16095 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D A4R28_10695 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D A4R28_12240 dihydropyrimidine dehydrogenase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D A4R28_12235 dihydropyrimidine dehydrogenase subunit B K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D A4R28_12155 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D A4R28_03590 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D A4R28_12160 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D A4R28_25030 flavin reductase K09024 rutF; flavin reductase [EC:1.5.1.-] D A4R28_14780 hypothetical protein K09023 rutD; aminoacrylate hydrolase [EC:3.5.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:mcic00250] D A4R28_14755 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_15425 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_17145 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_08030 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D A4R28_20960 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D A4R28_01195 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D A4R28_27155 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D A4R28_30455 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D A4R28_00235 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D A4R28_00315 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D A4R28_16470 serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D A4R28_08200 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D A4R28_23655 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D A4R28_18910 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D A4R28_20135 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D A4R28_05330 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D A4R28_06955 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D A4R28_28175 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D A4R28_00055 aminotransferase K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96] D A4R28_00180 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4R28_09595 gabD; succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4R28_21410 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4R28_21565 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4R28_17280 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D A4R28_17275 gltD; glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D A4R28_22225 gltD; glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D A4R28_22675 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D A4R28_09565 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D A4R28_26575 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_29255 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_29610 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_01200 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_08275 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_08280 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_17470 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_22970 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_15295 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D A4R28_15215 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D A4R28_08800 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D A4R28_05285 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D A4R28_31835 sugar isomerase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D A4R28_06380 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D A4R28_24840 aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D A4R28_03250 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:mcic00260] D A4R28_18655 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D A4R28_23725 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D A4R28_05975 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D A4R28_01995 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D A4R28_02040 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D A4R28_17285 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D A4R28_04650 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A4R28_16460 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A4R28_21060 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A4R28_16470 serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D A4R28_28035 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D A4R28_26560 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D A4R28_24645 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A4R28_18365 dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D A4R28_20150 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D A4R28_00670 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D A4R28_20155 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D A4R28_10625 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D A4R28_04300 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D A4R28_04305 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D A4R28_21045 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D A4R28_28830 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D A4R28_19455 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D A4R28_23670 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D A4R28_06155 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D A4R28_01295 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A4R28_01365 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A4R28_06165 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A4R28_16485 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A4R28_24930 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A4R28_08110 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23985 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_06160 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D A4R28_03180 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D A4R28_02465 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D A4R28_02460 betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D A4R28_26375 Rieske (2Fe-2S) protein K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251] D A4R28_26370 hybrid-cluster NAD(P)-dependent oxidoreductase K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251] D A4R28_26990 glycine cleavage system protein T K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4] D A4R28_09725 glycine cleavage system protein T K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4] D A4R28_09770 glycine cleavage system protein T K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4] D A4R28_10085 dimethylglycine dehydrogenase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4] D A4R28_10870 glycine cleavage system protein T K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4] D A4R28_12265 glycine cleavage system protein T K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4] D A4R28_26975 sarcosine oxidase subunit alpha family protein K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D A4R28_17580 sarcosine oxidase subunit alpha K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D A4R28_26985 sarcosine oxidase subunit beta K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D A4R28_17595 sarcosine oxidase subunit beta K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D A4R28_26970 hypothetical protein K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D A4R28_17575 sarcosine oxidase subunit gamma K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D A4R28_26980 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D A4R28_17585 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D A4R28_26430 SAM-dependent methyltransferase K18897 sdmt; sarcosine/dimethylglycine N-methyltransferase [EC:2.1.1.157] D A4R28_24195 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D A4R28_11950 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D A4R28_24200 cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D A4R28_07020 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D A4R28_29710 eutB; hydroxyectoine utilization dehydratase EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D A4R28_08975 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D A4R28_18925 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D A4R28_24455 pyridoxal-5'-phosphate-dependent protein K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D A4R28_14530 serine/threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D A4R28_22550 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D A4R28_26115 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D A4R28_26120 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D A4R28_21735 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D A4R28_21800 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D A4R28_21810 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D A4R28_29720 ectoine hydrolase DoeA K15783 doeA; ectoine hydrolase [EC:3.5.4.44] D A4R28_21570 ectoine hydrolase DoeA K15783 doeA; ectoine hydrolase [EC:3.5.4.44] D A4R28_05060 ectoine hydrolase DoeA K15783 doeA; ectoine hydrolase [EC:3.5.4.44] D A4R28_29725 N-alpha-acetyl diaminobutyric acid deacetylase DoeB K15784 doeB; N2-acetyl-L-2,4-diaminobutanoate deacetylase [EC:3.5.1.125] D A4R28_21450 peptidase M14 K15784 doeB; N2-acetyl-L-2,4-diaminobutanoate deacetylase [EC:3.5.1.125] D A4R28_29665 hypothetical protein K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76] D A4R28_21385 hypothetical protein K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76] D A4R28_21560 hypothetical protein K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76] D A4R28_29670 NAD-dependent succinate-semialdehyde dehydrogenase K15786 doeC; aspartate-semialdehyde dehydrogenase [EC:1.2.1.-] C 00270 Cysteine and methionine metabolism [PATH:mcic00270] D A4R28_08935 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D A4R28_08235 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D A4R28_24535 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D A4R28_24680 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D A4R28_11950 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D A4R28_24200 cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D A4R28_03765 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D A4R28_24195 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D A4R28_29115 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D A4R28_09795 methionine synthase I K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D A4R28_09915 methyltetrahydrofolate--corrinoid methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D A4R28_28265 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D A4R28_21055 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D A4R28_20930 conjugal transfer protein TraI K22955 traI; acyl homoserine lactone synthase [EC:2.3.1.184] D A4R28_29915 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D A4R28_01235 S-methyl-5-thioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100] D A4R28_15840 polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D A4R28_01230 S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D A4R28_12110 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D A4R28_14030 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D A4R28_26055 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D A4R28_21860 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] D A4R28_18655 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D A4R28_23725 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D A4R28_05975 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D A4R28_19035 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D A4R28_04920 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D A4R28_28675 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D A4R28_02535 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A4R28_15785 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A4R28_29760 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D A4R28_24725 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D A4R28_14755 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_15425 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_17145 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_08030 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D A4R28_08225 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D A4R28_22550 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D A4R28_23475 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D A4R28_07020 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D A4R28_18365 dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D A4R28_20150 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D A4R28_00670 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D A4R28_20155 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:mcic00280] D A4R28_02535 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A4R28_15785 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A4R28_24000 2-oxoisovalerate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D A4R28_23995 2-oxoisovalerate dehydrogenase K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D A4R28_27085 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D A4R28_23990 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D A4R28_08110 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23985 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_26240 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D A4R28_27845 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D A4R28_17530 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D A4R28_02845 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D A4R28_28395 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A4R28_28580 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A4R28_06215 acetyl/propionyl-CoA carboxylase subuit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D A4R28_08255 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D A4R28_10245 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D A4R28_02510 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D A4R28_02515 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D A4R28_30785 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D A4R28_07395 oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D A4R28_09720 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D A4R28_15640 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D A4R28_20530 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D A4R28_30780 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_00140 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_13975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_24900 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_24825 malonyl-CoA synthase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-] D A4R28_12170 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D A4R28_02820 3-methylcrotonyl-CoA carboxylase K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D A4R28_02840 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D A4R28_29315 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D A4R28_28575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_02485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_20025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:mcic00290] D A4R28_29710 eutB; hydroxyectoine utilization dehydratase EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D A4R28_08975 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D A4R28_18925 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D A4R28_24455 pyridoxal-5'-phosphate-dependent protein K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D A4R28_14530 serine/threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D A4R28_23370 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D A4R28_23765 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D A4R28_00130 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D A4R28_23745 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D A4R28_26795 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_00860 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_10560 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_10715 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_12100 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_14740 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_19140 decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_10555 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D A4R28_10465 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D A4R28_27560 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D A4R28_09175 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D A4R28_02535 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A4R28_15785 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A4R28_03110 citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D A4R28_16245 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:mcic00300] D A4R28_05975 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D A4R28_18655 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D A4R28_23725 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D A4R28_02910 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D A4R28_06935 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D A4R28_03605 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D A4R28_24640 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D A4R28_25325 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D A4R28_28650 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D A4R28_09660 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D A4R28_25350 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D A4R28_23495 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D A4R28_18920 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D A4R28_11045 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D A4R28_11040 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:mcic00310] D A4R28_16725 aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D A4R28_23450 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D A4R28_08110 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23985 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_16760 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D A4R28_28395 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A4R28_28580 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A4R28_28575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_02485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_20025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_22550 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D A4R28_27645 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D A4R28_00180 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4R28_09595 gabD; succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4R28_21410 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4R28_21565 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4R28_29335 hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13] D A4R28_12095 CoA-transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-] D A4R28_13430 lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] D A4R28_08050 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D A4R28_31970 hypothetical protein K26064 amaD; D-lysine oxidase D A4R28_30780 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_00140 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_13975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_24900 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:mcic00220] D A4R28_28655 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D A4R28_23655 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D A4R28_18910 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D A4R28_25990 arginase K01476 rocF; arginase [EC:3.5.3.1] D A4R28_00095 allophanate hydrolase K01941 uca; urea carboxylase [EC:6.3.4.6] D A4R28_25710 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D A4R28_25725 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D A4R28_25740 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D A4R28_08800 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D A4R28_05285 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D A4R28_26575 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_29255 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_29610 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_01200 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_08275 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_08280 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_17470 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_22970 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_15295 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D A4R28_15215 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D A4R28_22675 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D A4R28_14755 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_15425 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_17145 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_08030 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D A4R28_18740 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D A4R28_04910 hypothetical protein K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1] D A4R28_25285 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D A4R28_04850 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D A4R28_28650 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D A4R28_00905 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] D A4R28_14445 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:mcic00330] D A4R28_10145 creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D A4R28_14555 hypothetical protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D A4R28_27570 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D A4R28_10120 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D A4R28_14745 methylhydantoinase K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D A4R28_24915 hydantoinase K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D A4R28_00025 hydantoinase K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D A4R28_00030 methylhydantoinase K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D A4R28_14750 5-oxoprolinase K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D A4R28_24920 methylhydantoinase K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D A4R28_04855 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D A4R28_07950 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D A4R28_30635 arginase K01480 speB; agmatinase [EC:3.5.3.11] D A4R28_03225 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D A4R28_12015 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D A4R28_17100 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D A4R28_09740 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D A4R28_24985 hypothetical protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D A4R28_30780 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_00140 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_13975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_24900 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_27645 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D A4R28_13420 acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D A4R28_19455 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D A4R28_23670 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D A4R28_10095 aspartate aminotransferase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84] D A4R28_14195 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_17105 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_17905 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_25280 6-aminohexanoate hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_08730 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_23905 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_29245 oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D A4R28_22965 oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D A4R28_14455 aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D A4R28_24955 aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D A4R28_25990 arginase K01476 rocF; arginase [EC:3.5.3.1] D A4R28_29155 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D A4R28_09565 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D A4R28_29655 ornithine cyclodeaminase K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12] D A4R28_20620 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D A4R28_20615 proA; gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D A4R28_03105 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D A4R28_14755 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_15425 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_17145 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_08030 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D A4R28_08050 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D A4R28_27500 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4] D A4R28_01460 mandelate racemase K21624 c3lhypd; cis-L-3-hydroxyproline dehydratase [EC:4.2.1.171] C 00340 Histidine metabolism [PATH:mcic00340] D A4R28_29845 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D A4R28_29840 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D A4R28_26000 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D A4R28_06005 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D A4R28_25985 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D A4R28_05735 nickel transporter K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D A4R28_25975 imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D A4R28_25995 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D A4R28_25965 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D A4R28_32015 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_02865 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_14305 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_14635 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_19030 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_21975 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_17300 histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D A4R28_29025 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D A4R28_14295 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D A4R28_04400 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D A4R28_12545 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D A4R28_09010 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D A4R28_04410 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D A4R28_04395 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D A4R28_04390 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13] D A4R28_04405 N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] D A4R28_30780 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_00140 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_13975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_24900 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_19455 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D A4R28_23670 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] C 00350 Tyrosine metabolism [PATH:mcic00350] D A4R28_14755 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_15425 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_17145 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_08030 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D A4R28_32015 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_02865 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_14305 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_14635 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_19030 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_21975 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_04350 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D A4R28_04320 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D A4R28_09465 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D A4R28_04330 2-keto-4-pentenoate hydratase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D A4R28_06845 amino acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D A4R28_24685 amino acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D A4R28_04945 pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D A4R28_19455 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D A4R28_23670 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D A4R28_30685 betaine-aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D A4R28_06210 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D A4R28_16375 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D A4R28_09470 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D A4R28_25035 Pyoverdin chromophore biosynthetic protein pvcC K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] D A4R28_25015 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60] D A4R28_25020 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D A4R28_25000 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-] D A4R28_05310 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D A4R28_14670 2-dehydro-3-deoxyglucarate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D A4R28_00180 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4R28_09595 gabD; succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4R28_21410 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4R28_21565 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4R28_16590 gentisate 1,2-dioxygenase K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4] D A4R28_09460 fumarylacetoacetate hydrolase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] C 00360 Phenylalanine metabolism [PATH:mcic00360] D A4R28_25300 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D A4R28_06845 amino acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D A4R28_24685 amino acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D A4R28_04945 pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D A4R28_19455 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D A4R28_23670 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D A4R28_30685 betaine-aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D A4R28_28395 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A4R28_18845 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D A4R28_14755 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_15425 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_17145 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_08030 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D A4R28_32015 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_02865 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_14305 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_14635 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_19030 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_21975 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_04350 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D A4R28_28840 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D A4R28_06180 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D A4R28_20550 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D A4R28_08050 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D A4R28_15135 hydroperoxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] D A4R28_14195 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_17105 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_17905 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_25280 6-aminohexanoate hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_08730 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_23905 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_25925 Rieske family ferredoxin K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component D A4R28_12560 Rieske family ferredoxin K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component D A4R28_25930 ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D A4R28_28180 pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D A4R28_02665 hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00380 Tryptophan metabolism [PATH:mcic00380] D A4R28_07205 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D A4R28_00175 esterase K01432 AFMID; arylformamidase [EC:3.5.1.9] D A4R28_07215 esterase K01432 AFMID; arylformamidase [EC:3.5.1.9] D A4R28_07200 kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3] D A4R28_23450 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D A4R28_08110 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23985 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_16760 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D A4R28_28395 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A4R28_28580 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A4R28_28575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_02485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_20025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_06845 amino acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D A4R28_24685 amino acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D A4R28_04945 pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D A4R28_19455 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D A4R28_23670 amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D A4R28_30780 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_00140 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_13975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_24900 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_10535 nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D A4R28_10530 nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] D A4R28_14195 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_17105 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_17905 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_25280 6-aminohexanoate hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_08730 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_23905 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_29995 catalase HPII K03781 katE; catalase [EC:1.11.1.6] D A4R28_15135 hydroperoxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:mcic00400] D A4R28_25885 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D A4R28_06410 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D A4R28_19170 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D A4R28_08820 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D A4R28_24075 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D A4R28_19175 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D A4R28_26815 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D A4R28_01845 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D A4R28_16175 anthranilate synthase K13503 trpEG; anthranilate synthase [EC:4.1.3.27] D A4R28_07235 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D A4R28_26125 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D A4R28_07230 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D A4R28_26115 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D A4R28_26120 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D A4R28_23695 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5] D A4R28_19025 prephenate dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D A4R28_28075 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D A4R28_14755 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_15425 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_17145 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_08030 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D A4R28_32015 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_02865 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_14305 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_14635 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_19030 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_21975 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_25300 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:mcic00410] D A4R28_21760 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D A4R28_28175 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D A4R28_30780 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_00140 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_13975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_24900 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_27645 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D A4R28_08860 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D A4R28_20940 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D A4R28_12240 dihydropyrimidine dehydrogenase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D A4R28_12235 dihydropyrimidine dehydrogenase subunit B K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D A4R28_12155 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D A4R28_03590 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D A4R28_12160 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D A4R28_12170 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D A4R28_28395 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A4R28_28580 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A4R28_20530 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:mcic00430] D A4R28_28895 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D A4R28_25140 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D A4R28_08200 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D A4R28_22675 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D A4R28_07885 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:mcic00440] D A4R28_00655 phosphonoacetate hydrolase K19670 phnA; phosphonoacetate hydrolase [EC:3.11.1.2] D A4R28_00660 phosphonoacetaldehyde dehydrogenase K00206 phnY; phosphonoacetaldehyde dehydrogenase [EC:1.2.1.-] D A4R28_00650 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D A4R28_18275 carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37] D A4R28_18265 phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37] D A4R28_18270 carbon-phosphorus lyase subunit PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37] D A4R28_18300 phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37] D A4R28_25830 phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63] D A4R28_18290 carbon-phosphorus lyase K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1] D A4R28_07690 phosphoribosyl 1,2-cyclic phosphodiesterase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:mcic00450] D A4R28_03765 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D A4R28_29115 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D A4R28_09795 methionine synthase I K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D A4R28_09915 methyltetrahydrofolate--corrinoid methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D A4R28_11950 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D A4R28_24200 cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D A4R28_12110 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D A4R28_05135 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D A4R28_32655 pyridine nucleotide-disulfide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D A4R28_06540 ferredoxin--NADP(+) reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D A4R28_15455 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D A4R28_24655 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D A4R28_02315 adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D A4R28_02310 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D A4R28_07680 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:mcic00460] D A4R28_28895 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D A4R28_25140 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D A4R28_04650 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A4R28_16460 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A4R28_21060 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:mcic00470] D A4R28_20565 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D A4R28_08050 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D A4R28_11005 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A4R28_12945 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A4R28_21605 hypothetical protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A4R28_22550 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D A4R28_08800 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D A4R28_05285 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D A4R28_05200 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D A4R28_11030 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D A4R28_06495 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D A4R28_01195 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D A4R28_23495 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D A4R28_18920 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D A4R28_28845 alanine racemase K21898 orr; ornithine racemase [EC:5.1.1.12] D A4R28_27500 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4] D A4R28_20505 hydroxyproline-2-epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8] D A4R28_20515 dihydrodipicolinate synthase family protein K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22] D A4R28_28840 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D A4R28_06180 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D A4R28_20550 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:mcic00480] D A4R28_28895 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D A4R28_25140 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D A4R28_12245 cation transporter K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D A4R28_14105 cation transporter K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D A4R28_19010 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D A4R28_11980 5-oxoprolinase K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9] D A4R28_00050 lactam utilization protein LamB K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D A4R28_00110 lactam utilization protein LamB K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D A4R28_29760 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D A4R28_24725 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D A4R28_28480 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D A4R28_03375 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D A4R28_07280 peptidase M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D A4R28_02750 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D A4R28_31595 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_03120 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_03480 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_03895 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_05180 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_07960 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_10480 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_15410 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_16380 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_16575 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_19645 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_19790 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_24530 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_24610 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_25800 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_07520 glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D A4R28_05190 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D A4R28_18200 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D A4R28_23115 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D A4R28_29220 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D A4R28_23120 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D A4R28_02010 alkyl hydroperoxide reductase K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D A4R28_12015 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D A4R28_17100 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:mcic00540] D A4R28_07165 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D A4R28_10985 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D A4R28_07155 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D A4R28_07170 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D A4R28_07175 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D A4R28_04195 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D A4R28_17250 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D A4R28_08155 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D A4R28_28070 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D A4R28_04190 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D A4R28_09650 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D A4R28_15475 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D A4R28_15480 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D A4R28_15470 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D A4R28_15500 ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D A4R28_15510 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D A4R28_15505 lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D A4R28_02135 glycosyl transferase family 9 K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D A4R28_13660 glycosyl transferase family 9 K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D A4R28_31890 glycosyl transferase family 9 K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D A4R28_02300 ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:mcic00541] D A4R28_27240 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A4R28_17260 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A4R28_28835 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D A4R28_32510 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D A4R28_27190 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D A4R28_02180 capsular biosynthesis protein CpsI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D A4R28_02220 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D A4R28_02230 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D A4R28_10020 NAD-dependent dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D A4R28_33075 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D A4R28_02225 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D A4R28_02235 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D A4R28_33065 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D A4R28_30090 CDP-paratose 2-epimerase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10] D A4R28_06375 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:mcic00550] D A4R28_29035 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D A4R28_11010 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D A4R28_11015 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D A4R28_11030 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D A4R28_11045 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D A4R28_11005 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A4R28_12945 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A4R28_21605 hypothetical protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A4R28_11040 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D A4R28_07135 di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D A4R28_05500 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D A4R28_24605 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D A4R28_24360 phosphoesterase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D A4R28_11035 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D A4R28_11020 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D A4R28_19825 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D A4R28_02625 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A4R28_08785 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A4R28_18120 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A4R28_12315 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D A4R28_11050 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D A4R28_07665 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:mcic00552] D A4R28_05500 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D A4R28_24605 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D A4R28_24360 phosphoesterase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:mcic00543] D A4R28_08935 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D A4R28_27135 exopolysaccharide biosynthesis protein K16566 exoY; exopolysaccharide production protein ExoY D A4R28_27225 succinoglycan biosynthesis protein exoa K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-] D A4R28_27220 glycosyl transferase family 1 K16558 exoL; succinoglycan biosynthesis protein ExoL [EC:2.-.-.-] D A4R28_27230 glycosyl transferase family A K16556 exoM; succinoglycan biosynthesis protein ExoM [EC:2.4.-.-] D A4R28_33115 hypothetical protein K16568 exoZ; exopolysaccharide production protein ExoZ D A4R28_27235 glycosyl transferase K16555 exoO; succinoglycan biosynthesis protein ExoO [EC:2.4.-.-] D A4R28_27175 glycosyl transferase family A K16564 exoU; succinoglycan biosynthesis protein ExoU [EC:2.4.-.-] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:mcic00730] D A4R28_22280 phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D A4R28_22305 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D A4R28_05115 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A4R28_22050 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A4R28_22285 glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19] D A4R28_01900 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D A4R28_22295 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D A4R28_20305 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D A4R28_22300 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D A4R28_01070 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D A4R28_20110 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D A4R28_08355 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:mcic00740] D A4R28_01850 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D A4R28_04665 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D A4R28_01215 riboflavin synthase subunit beta K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D A4R28_04685 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D A4R28_04670 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D A4R28_04090 bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D A4R28_15935 phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D A4R28_31950 flavin reductase K23462 tgnA; flavin-dependent trigonelline monooxygenase, reductase component [EC:1.5.1.36] D A4R28_26960 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] C 00750 Vitamin B6 metabolism [PATH:mcic00750] D A4R28_01815 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D A4R28_22765 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D A4R28_04870 oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D A4R28_20155 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D A4R28_30775 hypothetical protein K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D A4R28_03350 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D A4R28_10505 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D A4R28_02040 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D A4R28_16605 pyridoxine 4-oxidase K18607 pno; pyridoxine 4-oxidase [EC:1.1.3.12] D A4R28_16520 aminotransferase K18608 ppaT; pyridoxamine---pyruvate transaminase [EC:2.6.1.30] D A4R28_16515 pyridoxal 4-dehydrogenase K18609 pldh; pyridoxal 4-dehydrogenase [EC:1.1.1.107] D A4R28_16525 MBL fold metallo-hydrolase K18610 pdla; 4-pyridoxolactonase [EC:3.1.1.27] D A4R28_16595 dehydrogenase K18611 K18611; 4-pyridoxate dehydrogenase [EC:1.1.99.42] D A4R28_16570 3-hydroxybutyryl-CoA dehydrogenase K18612 E1.2.1.100; 5-formyl-3-hydroxy-2-methylpyridine 4-carboxylic acid 5-dehydrogenase [EC:1.2.1.100] C 00760 Nicotinate and nicotinamide metabolism [PATH:mcic00760] D A4R28_20960 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D A4R28_14775 hypothetical protein K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21] D A4R28_20955 quinolinate synthase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D A4R28_20965 nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D A4R28_25520 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D A4R28_17740 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D A4R28_06630 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D A4R28_17225 multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D A4R28_09095 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D A4R28_19335 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D A4R28_32390 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D A4R28_20610 nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D A4R28_08035 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D A4R28_28085 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D A4R28_30470 nadE; NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D A4R28_00230 nadE; NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D A4R28_06445 NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D A4R28_08085 damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D A4R28_25480 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D A4R28_08745 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D A4R28_04560 NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D A4R28_26700 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D A4R28_26705 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D A4R28_26710 NAD synthetase K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D A4R28_29705 ectoine utilization protein EutA K01799 nicE; maleate isomerase [EC:5.2.1.1] D A4R28_06185 Asp/Glu racemase K01799 nicE; maleate isomerase [EC:5.2.1.1] D A4R28_25465 6-hydroxynicotinate reductase K20449 hnr; 6-hydroxynicotinate reductase [EC:1.3.7.1] D A4R28_29555 Enamidase K15358 ena; enamidase [EC:3.5.2.18] D A4R28_00180 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4R28_09595 gabD; succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4R28_21410 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A4R28_21565 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:mcic00770] D A4R28_26795 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_00860 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_10560 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_10715 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_12100 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_14740 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_19140 decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A4R28_10555 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D A4R28_10465 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D A4R28_27560 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D A4R28_09175 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D A4R28_08855 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D A4R28_12555 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D A4R28_20945 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D A4R28_25130 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D A4R28_25345 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D A4R28_08860 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D A4R28_20940 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D A4R28_26005 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D A4R28_17785 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D A4R28_08035 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D A4R28_06780 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D A4R28_24080 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D A4R28_02960 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D A4R28_02535 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A4R28_15785 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A4R28_12240 dihydropyrimidine dehydrogenase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D A4R28_12235 dihydropyrimidine dehydrogenase subunit B K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D A4R28_12155 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D A4R28_03590 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D A4R28_12160 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D A4R28_21760 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D A4R28_30780 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_00140 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_13975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_24900 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:mcic00780] D A4R28_28335 beta-ketoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D A4R28_31175 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D A4R28_03325 beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A4R28_09635 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A4R28_09640 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A4R28_25555 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A4R28_29225 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_00135 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_03315 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_05035 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_06480 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_07475 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_13465 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_16200 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_25165 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_07160 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D A4R28_28330 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D A4R28_01830 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D A4R28_20975 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D A4R28_20985 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D A4R28_20980 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D A4R28_20970 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D A4R28_10255 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:mcic00785] D A4R28_10215 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D A4R28_08100 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D A4R28_08110 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23985 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_08130 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D A4R28_08125 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D A4R28_08120 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A4R28_19370 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A4R28_23455 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D A4R28_23450 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D A4R28_24000 2-oxoisovalerate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D A4R28_23995 2-oxoisovalerate dehydrogenase K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D A4R28_27085 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D A4R28_23990 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D A4R28_06155 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D A4R28_01295 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A4R28_01365 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A4R28_06165 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A4R28_16485 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A4R28_24930 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A4R28_06160 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:mcic00790] D A4R28_06010 GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D A4R28_22710 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D A4R28_06560 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D A4R28_06565 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D A4R28_06555 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D A4R28_10655 diacylglycerol kinase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D A4R28_26105 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D A4R28_01850 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D A4R28_17200 aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D A4R28_17205 hypothetical protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D A4R28_21950 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D A4R28_05775 pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D A4R28_23610 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D A4R28_25300 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D A4R28_21945 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D A4R28_21955 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D A4R28_04265 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D A4R28_05770 GHMP kinase K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54] D A4R28_05715 flavoprotein K18853 dmrX; dihydromethanopterin reductase (acceptor) [EC:1.5.99.15] D A4R28_05750 RimK family alpha-L-glutamate ligase K15740 mptN; tetrahydromethanopterin:alpha-L-glutamate ligase [EC:6.3.2.33] D A4R28_07440 cyclic pyranopterin phosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D A4R28_07225 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D A4R28_03510 molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D A4R28_01675 molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D A4R28_07220 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D A4R28_05385 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D A4R28_07420 molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:mcic00670] D A4R28_10655 diacylglycerol kinase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D A4R28_16130 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D A4R28_29195 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D A4R28_29815 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D A4R28_04650 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A4R28_16460 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A4R28_21060 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A4R28_03660 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D A4R28_22660 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D A4R28_25370 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D A4R28_01295 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A4R28_01365 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A4R28_06165 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A4R28_16485 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A4R28_24930 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A4R28_29115 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D A4R28_09795 methionine synthase I K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D A4R28_09915 methyltetrahydrofolate--corrinoid methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D A4R28_10695 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D A4R28_12550 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D A4R28_16475 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D A4R28_09910 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D A4R28_12025 methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D A4R28_16480 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D A4R28_08190 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D A4R28_20410 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:mcic00860] D A4R28_28830 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D A4R28_06465 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A4R28_07185 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A4R28_26580 aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D A4R28_27075 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D A4R28_14915 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D A4R28_04615 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D A4R28_23175 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D A4R28_23170 uroporphyrinogen III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D A4R28_24060 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D A4R28_16000 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D A4R28_30245 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D A4R28_20725 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D A4R28_24055 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D A4R28_17230 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D A4R28_18085 siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D A4R28_10395 uroporphyrin-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D A4R28_01960 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D A4R28_04840 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D A4R28_10365 precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D A4R28_10355 precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83] D A4R28_10370 precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D A4R28_10390 precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D A4R28_10385 cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D A4R28_10665 precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152] D A4R28_10375 cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D A4R28_10380 precorrin-6Y methyltransferase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D A4R28_10360 cobH; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D A4R28_10400 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D A4R28_10350 cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D A4R28_19125 cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D A4R28_19120 cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2] D A4R28_05360 4-hydroxyphenylacetate 3-monooxygenase K13786 cobR; cob(II)yrinic acid a,c-diamide reductase [EC:1.16.8.-] D A4R28_18825 cob(I)yrinic acid a c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D A4R28_10165 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D A4R28_09705 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D A4R28_10160 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D A4R28_10155 threonine-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC D A4R28_10170 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D A4R28_10405 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D A4R28_07355 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D A4R28_10410 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D A4R28_25290 magnesium-protoporphyrin IX monomethyl ester cyclase K04034 bchE; anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:1.21.98.3] D A4R28_16295 pyridoxamine 5'-phosphate oxidase K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D A4R28_28195 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:mcic00130] D A4R28_01775 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D A4R28_18670 bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D A4R28_07565 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D A4R28_23280 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D A4R28_17765 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D A4R28_10105 NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D A4R28_10495 NAD(P)-dependent oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D A4R28_04350 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:mcic00900] D A4R28_01900 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D A4R28_08080 ispDF; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] D A4R28_01680 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D A4R28_19855 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D A4R28_01990 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D A4R28_28575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_02485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_20025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_19830 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D A4R28_01705 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D A4R28_07135 di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:mcic00906] D A4R28_09050 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D A4R28_30780 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_00140 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_13975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_24900 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:mcic00907] D A4R28_28395 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A4R28_28580 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A4R28_14985 short chain dehydrogenase K13775 atuG; citronellol/citronellal dehydrogenase C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D A4R28_05655 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D A4R28_19705 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics D A4R28_00280 nucleotidyltransferase K21210 ncsC; NDP-mannose synthase C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:mcic00523] D A4R28_02220 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D A4R28_02230 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D A4R28_10020 NAD-dependent dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D A4R28_33075 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D A4R28_02225 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D A4R28_02235 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D A4R28_30095 nucleoside-diphosphate-sugar epimerase K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25] C 01054 Nonribosomal peptide structures [PATH:mcic01054] D A4R28_01195 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D A4R28_02230 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D A4R28_10020 NAD-dependent dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D A4R28_21495 penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis [PATH:mcic00332] D A4R28_20620 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D A4R28_20615 proA; gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:mcic00261] D A4R28_02315 adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D A4R28_02310 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D A4R28_18655 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D A4R28_23725 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D A4R28_02910 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D A4R28_06935 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D A4R28_03605 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D A4R28_24640 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:mcic00521] D A4R28_24630 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D A4R28_01150 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D A4R28_02380 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D A4R28_33035 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A4R28_02450 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A4R28_30045 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D A4R28_04175 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D A4R28_20320 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D A4R28_25895 inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D A4R28_02220 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D A4R28_02230 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D A4R28_10020 NAD-dependent dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D A4R28_33075 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D A4R28_02225 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D A4R28_02235 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D A4R28_24630 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D A4R28_01150 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:mcic00525] D A4R28_02220 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D A4R28_02230 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D A4R28_10020 NAD-dependent dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:mcic00401] D A4R28_19025 prephenate dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D A4R28_14755 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_15425 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_17145 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_08030 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D A4R28_32015 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_02865 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_14305 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_14635 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_19030 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_21975 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis [PATH:mcic00405] D A4R28_10425 phenazine biosynthesis protein PhzF K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17] D A4R28_13475 salicylate 1-monooxygenase K20940 phzS; 5-methylphenazine-1-carboxylate 1-monooxygenase [EC:1.14.13.218] C 00333 Prodigiosin biosynthesis D A4R28_03310 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D A4R28_29225 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_00135 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_03315 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_05035 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_06480 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_07475 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_13465 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_16200 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_25165 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_28330 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D A4R28_01830 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D A4R28_03320 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:mcic00999] D A4R28_28265 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D A4R28_21055 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D A4R28_24075 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites [PATH:mcic00997] D A4R28_28845 alanine racemase K21898 orr; ornithine racemase [EC:5.1.1.12] D A4R28_21890 lysine N6-hydroxylase K03897 iucD; lysine N6-hydroxylase [EC:1.14.13.59] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:mcic00362] D A4R28_01030 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D A4R28_15185 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D A4R28_22945 beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D A4R28_05325 bleomycin resistance protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D A4R28_02665 hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D A4R28_03190 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D A4R28_13460 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D A4R28_23525 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D A4R28_00405 6-chlorohydroxyquinol-1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37] D A4R28_00370 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] D A4R28_01045 protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D A4R28_01040 protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D A4R28_01050 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D A4R28_30725 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D A4R28_31930 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D A4R28_01035 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D A4R28_25930 ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D A4R28_28180 pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D A4R28_06535 2Fe-2S ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D A4R28_01055 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D A4R28_28580 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D A4R28_23065 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D A4R28_16760 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D A4R28_28395 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A4R28_18845 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D A4R28_28575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_02485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_20025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:mcic00627] D A4R28_10535 nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D A4R28_10530 nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] D A4R28_14195 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_17105 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_17905 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_25280 6-aminohexanoate hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_08730 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_23905 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_02855 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D A4R28_07210 2-aminobenzoate-CoA ligase K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32] D A4R28_27865 salicylyl-CoA 5-hydroxylase K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40] D A4R28_28395 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:mcic00364] D A4R28_09850 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D A4R28_10805 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D A4R28_10535 nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D A4R28_10530 nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] D A4R28_00370 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00625 Chloroalkane and chloroalkene degradation [PATH:mcic00625] D A4R28_27545 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D A4R28_09470 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D A4R28_06210 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D A4R28_16375 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D A4R28_30780 hypothetical protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_00140 betaine-aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_13975 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_24900 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A4R28_21925 nitrogenase molybdenum-iron protein subunit beta K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D A4R28_21935 nifH; nitrogenase reductase K02588 nifH; nitrogenase iron protein NifH D A4R28_21930 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D A4R28_12870 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] D A4R28_02060 2-haloalkanoic acid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D A4R28_02530 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:mcic00361] D A4R28_27545 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D A4R28_09850 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D A4R28_10805 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D A4R28_00370 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] D A4R28_00405 6-chlorohydroxyquinol-1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37] D A4R28_00400 2,4-dichlorophenol 6-monooxygenase K10676 tfdB; 2,4-dichlorophenol 6-monooxygenase [EC:1.14.13.20] D A4R28_05325 bleomycin resistance protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D A4R28_02060 2-haloalkanoic acid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D A4R28_02530 haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D A4R28_12870 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] C 00623 Toluene degradation [PATH:mcic00623] D A4R28_09850 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D A4R28_10805 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D A4R28_00370 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32] C 00622 Xylene degradation [PATH:mcic00622] D A4R28_05325 bleomycin resistance protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D A4R28_03190 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D A4R28_13460 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D A4R28_23525 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D A4R28_02665 hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:mcic00643] D A4R28_30685 betaine-aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D A4R28_04320 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D A4R28_09465 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D A4R28_04330 2-keto-4-pentenoate hydratase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D A4R28_10535 nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D A4R28_10530 nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] D A4R28_14195 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_17105 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_17905 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_25280 6-aminohexanoate hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_08730 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_23905 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D A4R28_05325 bleomycin resistance protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D A4R28_22955 3-oxoadipate--succinyl-CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D A4R28_22950 3-oxoadipate--succinyl-CoA transferase subunit B K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D A4R28_17365 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] C 00791 Atrazine degradation [PATH:mcic00791] D A4R28_22910 cysteine hydrolase K23359 biuH; biuret amidohydrolase [EC:3.5.1.84] D A4R28_00095 allophanate hydrolase K01941 uca; urea carboxylase [EC:6.3.4.6] D A4R28_25710 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D A4R28_25725 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D A4R28_25740 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:mcic00930] D A4R28_23090 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D A4R28_23530 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D A4R28_28395 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D A4R28_28580 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:mcic00621] D A4R28_03190 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D A4R28_13460 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D A4R28_23525 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D A4R28_02665 hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00626 Naphthalene degradation [PATH:mcic00626] D A4R28_09470 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D A4R28_06210 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D A4R28_16375 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D A4R28_01045 protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D A4R28_01040 protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation [PATH:mcic00365] D A4R28_21725 alanine-phosphoribitol ligase K16873 hmfH; 5-(hydroxymethyl)furfural/furfural oxidase [EC:1.1.3.47 1.1.3.-] D A4R28_21785 alanine-phosphoribitol ligase K16873 hmfH; 5-(hydroxymethyl)furfural/furfural oxidase [EC:1.1.3.47 1.1.3.-] C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:mcic03020] D A4R28_08520 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D A4R28_08515 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D A4R28_08340 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D A4R28_02935 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D A4R28_32925 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:mcic03010] D A4R28_26805 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D A4R28_07100 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D A4R28_08430 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D A4R28_05215 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D A4R28_08375 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D A4R28_03295 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D A4R28_08480 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D A4R28_08390 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D A4R28_04880 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D A4R28_08465 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D A4R28_08345 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D A4R28_08485 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D A4R28_08350 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D A4R28_08395 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D A4R28_28310 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D A4R28_23700 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D A4R28_08415 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D A4R28_03290 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D A4R28_08440 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D A4R28_28390 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D A4R28_17610 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D A4R28_08535 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D A4R28_08445 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D A4R28_08460 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D A4R28_08455 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D A4R28_08400 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D A4R28_08385 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D A4R28_08525 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D A4R28_03285 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D A4R28_08530 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D A4R28_08540 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D A4R28_04885 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D A4R28_08410 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D A4R28_08365 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D A4R28_08425 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D A4R28_08335 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D A4R28_08380 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D A4R28_23400 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D A4R28_26170 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D A4R28_20650 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D A4R28_08435 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D A4R28_08450 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D A4R28_08405 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D A4R28_15890 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D A4R28_20645 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D A4R28_19100 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D A4R28_08420 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D A4R28_08370 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D A4R28_20360 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D A4R28_19820 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D A4R28_06320 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D A4R28_26165 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D A4R28_19915 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D A4R28_18560 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A4R28_18545 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A4R28_18540 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:mcic00970] D A4R28_26825 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A4R28_03700 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A4R28_25795 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A4R28_09215 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D A4R28_04470 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D A4R28_02120 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D A4R28_19660 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A4R28_05950 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A4R28_28720 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A4R28_18775 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A4R28_16365 tRNA-Met K14230 tRNA-Met; tRNA Met D A4R28_14955 tRNA-Met K14230 tRNA-Met; tRNA Met D A4R28_18535 tRNA-Met K14230 tRNA-Met; tRNA Met D A4R28_18570 tRNA-Met K14230 tRNA-Met; tRNA Met D A4R28_03690 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D A4R28_28000 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A4R28_07500 tRNA-Val K14237 tRNA-Val; tRNA Val D A4R28_06465 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A4R28_07185 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A4R28_07000 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D A4R28_18375 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D A4R28_21595 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D A4R28_08880 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D A4R28_06990 asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D A4R28_05175 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D A4R28_04525 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D A4R28_01735 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D A4R28_01740 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D A4R28_06035 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D A4R28_09100 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D A4R28_03085 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D A4R28_07680 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D A4R28_25370 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D A4R28_09185 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D A4R28_22575 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D A4R28_04105 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D A4R28_28595 lysK; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D A4R28_09140 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D A4R28_10235 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D A4R28_29835 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D A4R28_26175 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D A4R28_26185 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D A4R28_05085 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D A4R28_27435 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:mcic03060] D A4R28_08360 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A4R28_08550 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D A4R28_07250 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D A4R28_09060 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein D A4R28_09065 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D A4R28_25205 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A4R28_18755 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A4R28_24090 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D A4R28_23690 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D A4R28_28095 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D A4R28_23505 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D A4R28_09115 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D A4R28_09110 twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D A4R28_09105 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D A4R28_02965 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D A4R28_18015 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:mcic04122] D A4R28_05115 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A4R28_22050 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A4R28_08225 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D A4R28_19200 response regulator SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D A4R28_16355 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D A4R28_03510 molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D A4R28_07440 cyclic pyranopterin phosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D A4R28_03505 molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein D A4R28_13500 molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein D A4R28_07225 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D A4R28_01675 molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D A4R28_22290 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:mcic03018] D A4R28_20570 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D A4R28_08795 ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D A4R28_08140 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A4R28_28315 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D A4R28_08250 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D A4R28_06345 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D A4R28_23730 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D A4R28_22460 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D A4R28_24050 transcription termination factor Rho K03628 rho; transcription termination factor Rho D A4R28_10250 MBL fold metallo-hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D A4R28_24800 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D A4R28_03950 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4R28_13140 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4R28_14035 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4R28_20885 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4R28_08045 RNA chaperone Hfq K03666 hfq; host factor-I protein D A4R28_03815 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D A4R28_28625 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D A4R28_04605 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D A4R28_16015 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:mcic03030] D A4R28_24085 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A4R28_06220 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A4R28_28100 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A4R28_07675 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A4R28_24005 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A4R28_03380 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D A4R28_28380 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A4R28_11535 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A4R28_11810 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A4R28_03265 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D A4R28_15100 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D A4R28_06750 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4R28_11825 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4R28_02000 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D A4R28_01655 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D A4R28_18150 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A4R28_10965 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:mcic03410] D A4R28_17865 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D A4R28_02065 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D A4R28_24450 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D A4R28_28400 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D A4R28_18795 DNA-3-methyladenine glycosidase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D A4R28_29825 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D A4R28_26565 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D A4R28_02770 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D A4R28_02925 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D A4R28_30230 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D A4R28_09160 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D A4R28_13630 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D A4R28_23245 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D A4R28_18150 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A4R28_05995 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D A4R28_10965 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:mcic03420] D A4R28_06405 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D A4R28_31425 DEAD/DEAH box helicase K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D A4R28_06720 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D A4R28_15710 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D A4R28_03495 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D A4R28_03600 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A4R28_10825 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A4R28_18150 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A4R28_10965 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:mcic03430] D A4R28_27470 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D A4R28_04235 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D A4R28_03600 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A4R28_10825 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A4R28_29740 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D A4R28_01885 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D A4R28_05995 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D A4R28_06750 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4R28_11825 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4R28_06220 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A4R28_28380 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A4R28_11535 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A4R28_11810 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A4R28_28100 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A4R28_24005 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A4R28_07675 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A4R28_24085 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A4R28_03380 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D A4R28_10965 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:mcic03440] D A4R28_05995 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D A4R28_06750 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4R28_11825 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4R28_28375 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D A4R28_02990 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D A4R28_28120 recombination protein RecR K06187 recR; recombination protein RecR D A4R28_05170 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA D A4R28_18150 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A4R28_20250 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D A4R28_20245 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D A4R28_20265 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D A4R28_06395 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D A4R28_06220 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A4R28_28380 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A4R28_11535 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A4R28_11810 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A4R28_28100 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A4R28_24005 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A4R28_07675 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A4R28_24085 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A4R28_03380 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D A4R28_22555 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:mcic03450] D A4R28_32880 Ku protein K10979 ku; DNA end-binding protein Ku D A4R28_13645 Ku protein K10979 ku; DNA end-binding protein Ku D A4R28_24495 Ku protein K10979 ku; DNA end-binding protein Ku D A4R28_24490 DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:mcic02010] D A4R28_12345 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D A4R28_12325 sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D A4R28_12330 sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein D A4R28_12335 cysW; sulfate/thiosulfate transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein D A4R28_12340 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D A4R28_14410 nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein D A4R28_14405 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D A4R28_24180 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D A4R28_24170 taurine ABC transporter permease K15552 tauC; taurine transport system permease protein D A4R28_24175 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D A4R28_03610 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D A4R28_13290 bicyclomycin resistance protein K15553 ssuA; sulfonate transport system substrate-binding protein D A4R28_24160 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D A4R28_03620 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D A4R28_13300 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D A4R28_24150 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D A4R28_03615 mannosyltransferase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D A4R28_13295 ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D A4R28_24145 aliphatic sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D A4R28_10685 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D A4R28_10680 molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein D A4R28_10675 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D A4R28_18865 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D A4R28_19355 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D A4R28_18870 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D A4R28_19350 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D A4R28_18875 sugar ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D A4R28_19345 spermidine/putrescine ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D A4R28_20105 tbpA; thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein D A4R28_20100 thiamine ABC transporter permease K02063 thiP; thiamine transport system permease protein D A4R28_20095 thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D A4R28_01540 spermidine/putrescine ABC transporter K11069 potD; spermidine/putrescine transport system substrate-binding protein D A4R28_08700 ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D A4R28_08735 putrescine/spermidine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D A4R28_12700 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D A4R28_16785 putrescine/spermidine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D A4R28_22985 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D A4R28_23050 potassium transporter Trk K11069 potD; spermidine/putrescine transport system substrate-binding protein D A4R28_00980 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D A4R28_01535 spermidine/putrescine ABC transporter K11070 potC; spermidine/putrescine transport system permease protein D A4R28_08710 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D A4R28_12690 peptide ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D A4R28_16790 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D A4R28_22995 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D A4R28_23040 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D A4R28_00985 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D A4R28_01530 spermidine/putrescine ABC transporter K11071 potB; spermidine/putrescine transport system permease protein D A4R28_08705 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D A4R28_12695 peptide ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D A4R28_16795 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D A4R28_22990 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D A4R28_23045 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D A4R28_00990 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D A4R28_01550 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D A4R28_08715 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D A4R28_12685 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D A4R28_16800 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D A4R28_23000 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D A4R28_23055 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D A4R28_29290 spermidine/putrescine ABC transporter substrate-binding protein PotF K11073 potF; putrescine transport system substrate-binding protein D A4R28_03220 spermidine/putrescine ABC transporter substrate-binding protein PotF K11073 potF; putrescine transport system substrate-binding protein D A4R28_29305 spermidine/putrescine ABC transporter permease K11074 potI; putrescine transport system permease protein D A4R28_29300 putrescine/spermidine ABC transporter permease K11075 potH; putrescine transport system permease protein D A4R28_29295 ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D A4R28_00675 2-aminoethylphosphonate ABC transporter substrate-binding protein K11081 phnS; 2-aminoethylphosphonate transport system substrate-binding protein D A4R28_00690 phosphonate ABC transporter permease K11082 phnV; 2-aminoethylphosphonate transport system permease protein D A4R28_00685 2-aminoethylphosphonate ABC transporter permease K11083 phnU; 2-aminoethylphosphonate transport system permease protein D A4R28_00680 2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT K11084 phnT; 2-aminoethylphosphonate transport system ATP-binding protein D A4R28_27975 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D A4R28_01410 ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein D A4R28_03860 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D A4R28_16090 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D A4R28_27980 ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D A4R28_01400 ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D A4R28_16085 choline ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein D A4R28_27985 proline/glycine betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D A4R28_01405 ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D A4R28_16080 choline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D A4R28_04705 ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein D A4R28_04710 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D A4R28_04720 ABC transporter K05846 opuBD; osmoprotectant transport system permease protein D A4R28_04715 amino acid ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D A4R28_25640 sugar ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_24885 sugar ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_27325 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_27330 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_29410 glycerol-3-phosphate ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_31055 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_31865 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_00715 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_01105 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_05005 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_06310 glycerol-3-phosphate ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_06910 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_12600 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_12605 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_17055 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_17395 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_18175 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_18395 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_18400 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_22820 ABC transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_24860 sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D A4R28_31845 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D A4R28_24865 ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D A4R28_31850 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D A4R28_24870 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D A4R28_28940 ABC transporter substrate-binding protein K10188 lacE; lactose/L-arabinose transport system substrate-binding protein D A4R28_28945 lactose ABC transporter permease K10189 lacF; lactose/L-arabinose transport system permease protein D A4R28_28950 ABC transporter permease K10190 lacG; lactose/L-arabinose transport system permease protein D A4R28_28955 sugar ABC transporter ATP-binding protein K10191 lacK; lactose/L-arabinose transport system ATP-binding protein D A4R28_25655 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D A4R28_25650 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein D A4R28_25645 sugar ABC transporter permease K10229 smoG; polyol transport system permease protein D A4R28_26415 alpha-glucoside ABC transporter substrate-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein D A4R28_26410 alpha-glucoside ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein D A4R28_26405 alpha-glucoside ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein D A4R28_26395 ABC transporter ATP-binding protein K10235 aglK; alpha-glucoside transport system ATP-binding protein D A4R28_15350 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D A4R28_15345 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein D A4R28_15340 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein D A4R28_28705 sugar ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein D A4R28_28695 ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein D A4R28_28700 ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_06510 organic solvent ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D A4R28_06500 organic solvent ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D A4R28_06505 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D A4R28_07605 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D A4R28_16405 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D A4R28_16440 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D A4R28_16545 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D A4R28_17700 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D A4R28_22940 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D A4R28_13250 hypothetical protein K07335 bmpA; basic membrane protein A and related proteins D A4R28_29540 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D A4R28_07595 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D A4R28_13260 hypothetical protein K23535 nupB; general nucleoside transport system permease protein D A4R28_16415 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D A4R28_16430 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D A4R28_16535 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D A4R28_17725 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D A4R28_22930 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D A4R28_29530 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D A4R28_07600 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D A4R28_13265 hypothetical protein K23536 nupC; general nucleoside transport system permease protein D A4R28_16420 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D A4R28_16425 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D A4R28_16530 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D A4R28_17730 sugar ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D A4R28_22925 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D A4R28_29525 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D A4R28_29535 heme ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D A4R28_07590 ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein D A4R28_13255 hypothetical protein K23537 nupA; general nucleoside transport system ATP-binding protein D A4R28_16410 ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein D A4R28_16435 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D A4R28_16540 sugar ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein D A4R28_17720 heme ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D A4R28_22935 sugar ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein D A4R28_17380 sugar ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D A4R28_18190 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D A4R28_17385 ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein D A4R28_18185 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein D A4R28_17390 sugar ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D A4R28_18180 sugar ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D A4R28_25810 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_26910 ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_30905 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_31760 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D A4R28_00165 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_00205 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_05045 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_12395 ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_12440 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_12525 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_14335 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_18240 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_18530 transporter K10439 rbsB; ribose transport system substrate-binding protein D A4R28_19245 ABC transporter K10439 rbsB; ribose transport system substrate-binding protein D A4R28_19875 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_23085 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_25445 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_00590 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_00765 ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_14170 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D A4R28_14535 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D A4R28_30875 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_25820 sugar ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_26900 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_26905 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_30840 hypothetical protein K10440 rbsC; ribose transport system permease protein D A4R28_30885 hypothetical protein K10440 rbsC; ribose transport system permease protein D A4R28_30895 sugar ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_30900 hypothetical protein K10440 rbsC; ribose transport system permease protein D A4R28_31765 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_31775 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_00170 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_00200 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_00750 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_05040 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_12380 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_12385 sugar ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_12450 sugar ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_12520 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_12530 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_14320 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_14325 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_18250 ABC transporter K10440 rbsC; ribose transport system permease protein D A4R28_18520 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_19250 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_19885 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_23070 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_23075 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_00160 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_00600 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_00745 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_14175 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_14550 hypothetical protein K10440 rbsC; ribose transport system permease protein D A4R28_25815 D-xylose ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_26895 D-xylose ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_30880 hypothetical protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_30890 ABC transporter K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_31770 ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_00195 ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_00595 ABC transporter K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_05050 sugar ABC transporter K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_12390 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_14330 ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_18245 ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_18525 D-xylose ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_19255 D-xylose ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_19880 ABC transporter K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_23080 ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_25435 D-xylose ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_00755 ABC transporter K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_00760 ABC transporter K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_14180 ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_30845 hypothetical protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_26840 sugar ABC transporter substrate-binding protein K10537 araF; L-arabinose transport system substrate-binding protein D A4R28_26850 araH; L-arabinose ABC transporter permease AraH K10538 araH; L-arabinose transport system permease protein D A4R28_26845 araG; L-arabinose transporter ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D A4R28_13120 ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D A4R28_19575 D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D A4R28_13110 ABC transporter permease K10544 xylH; D-xylose transport system permease protein D A4R28_19570 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein D A4R28_13115 sugar ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D A4R28_19565 ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D A4R28_02345 sugar ABC transporter K10552 frcB; fructose transport system substrate-binding protein D A4R28_02350 ABC transporter permease K10553 frcC; fructose transport system permease protein D A4R28_02355 sugar ABC transporter ATP-binding protein K10554 frcA; fructose transport system ATP-binding protein D A4R28_28875 rhamnose ABC transporter substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein D A4R28_28865 branched-chain amino acid ABC transporter permease K10560 rhaP; rhamnose transport system permease protein D A4R28_28860 branched-chain amino acid ABC transporter permease K10561 rhaQ; rhamnose transport system permease protein D A4R28_28870 D-xylose ABC transporter ATP-binding protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D A4R28_00495 D-ribose ABC transporter substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein D A4R28_00575 D-ribose ABC transporter substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein D A4R28_00490 sugar ABC transporter permease K17203 eryF; erythritol transport system permease protein D A4R28_00560 sugar ABC transporter permease K17203 eryF; erythritol transport system permease protein D A4R28_00485 sugar ABC transporter ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein D A4R28_00565 sugar ABC transporter ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein D A4R28_29365 sugar ABC transporter substrate-binding protein K17205 xltC; putative xylitol transport system substrate-binding protein D A4R28_29370 sugar ABC transporter permease K17206 xltB; putative xylitol transport system permease protein D A4R28_29375 D-xylose ABC transporter ATP-binding protein K17207 xltA; putative xylitol transport system ATP-binding protein D A4R28_13830 LacI family transcriptional regulator K17208 ibpA; inositol transport system substrate-binding protein D A4R28_13820 sugar ABC transporter permease K17209 iatP; inositol transport system permease protein D A4R28_13825 D-xylose ABC transporter ATP-binding protein K17210 iatA; inositol transport system ATP-binding protein D A4R28_25910 rhizopine-binding protein K17213 K17213; inositol transport system substrate-binding protein D A4R28_25905 ABC transporter K17214 K17214; inositol transport system permease protein D A4R28_25900 ABC transporter ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein D A4R28_06885 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein D A4R28_06870 ABC transporter permease K17322 glpP; glycerol transport system permease protein D A4R28_06875 sugar ABC transporter permease K17323 glpQ; glycerol transport system permease protein D A4R28_06860 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein D A4R28_06865 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein D A4R28_18895 sn-glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D A4R28_18890 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D A4R28_18885 glycerol-3-phosphate transporter K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D A4R28_18880 glycerol-3-phosphate ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D A4R28_19610 phosphonate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D A4R28_19605 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D A4R28_19600 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D A4R28_19595 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D A4R28_28410 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D A4R28_18315 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D A4R28_18320 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D A4R28_18325 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D A4R28_18310 phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D A4R28_05445 polar amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D A4R28_14650 amino acid ABC transporter substrate-binding protein K10018 occT; octopine/nopaline transport system substrate-binding protein D A4R28_14660 ABC transporter permease K10019 occM; octopine/nopaline transport system permease protein D A4R28_14655 ABC transporter permease K10020 occQ; octopine/nopaline transport system permease protein D A4R28_14645 amino acid transporter K10021 occP; octopine/nopaline transport system ATP-binding protein [EC:7.4.2.1] D A4R28_03780 amino acid ABC transporter substrate-bindnig protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D A4R28_14715 ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D A4R28_03785 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D A4R28_14720 ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D A4R28_03790 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D A4R28_14725 ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D A4R28_03795 ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D A4R28_14730 glnQ; glutamine ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D A4R28_20080 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D A4R28_20075 cysteine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D A4R28_20070 ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D A4R28_25595 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_26945 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_00375 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_00415 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_00975 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_02815 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_05355 amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_20475 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_25085 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_25510 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_00065 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_14840 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_29105 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_29635 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_31820 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_25585 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_26665 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_26935 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_29645 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_31815 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_00075 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_00390 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_00430 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_00935 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_14845 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_20500 branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D A4R28_25100 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_25505 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_29090 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_25590 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_26940 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_00395 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_00930 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_14850 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein D A4R28_20495 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_25105 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_25500 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_00070 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_00435 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_29085 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_29630 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_31810 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_25575 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_26930 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_29100 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_31805 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_00085 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_00380 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_00420 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_00945 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_14855 hypothetical protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_20490 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_25090 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_25495 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_25580 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_26950 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_29095 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_29640 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_31800 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_00080 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_00385 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_00425 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_00940 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_14860 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_20485 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_25095 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_25490 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_29340 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_24950 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D A4R28_24940 ABC transporter permease K02072 metI; D-methionine transport system permease protein D A4R28_24945 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D A4R28_06680 urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D A4R28_00865 ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D A4R28_00885 branched-chain amino acid ABC transporter permease K11960 urtB; urea transport system permease protein D A4R28_06685 urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein D A4R28_00880 ABC transporter permease K11961 urtC; urea transport system permease protein D A4R28_06690 urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D A4R28_00875 ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein D A4R28_06695 ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein D A4R28_00870 ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D A4R28_06700 ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D A4R28_02405 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D A4R28_02410 ABC transporter K15581 oppB; oligopeptide transport system permease protein D A4R28_02415 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D A4R28_02420 microcin ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D A4R28_27780 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D A4R28_27895 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D A4R28_27785 peptide ABC transporter permease K12369 dppB; dipeptide transport system permease protein D A4R28_27890 ABC transporter permease K12369 dppB; dipeptide transport system permease protein D A4R28_27790 peptide transporter K12370 dppC; dipeptide transport system permease protein D A4R28_27885 ABC transporter permease K12370 dppC; dipeptide transport system permease protein D A4R28_27795 dppD; peptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D A4R28_27880 ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D A4R28_31990 ABC transporter K12371 dppD; dipeptide transport system ATP-binding protein D A4R28_27800 peptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D A4R28_27875 dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D A4R28_28055 hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein D A4R28_28060 hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein D A4R28_28050 microcin ABC transporter permease K13894 yejB; microcin C transport system permease protein D A4R28_28045 peptide ABC transporter permease K13895 yejE; microcin C transport system permease protein D A4R28_28040 microcin ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D A4R28_28905 ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D A4R28_22895 ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D A4R28_28910 Fe3+-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein D A4R28_22900 Fe3+-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein D A4R28_22885 iron-hydroxamate transporter ATP-binding subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D A4R28_01715 biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component D A4R28_02170 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D A4R28_02260 hypothetical protein K09690 wzm; homopolymeric O-antigen transport system permease protein D A4R28_02255 hypothetical protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D A4R28_22160 nodulation protein NodJ K09694 nodJ; lipooligosaccharide transport system permease protein D A4R28_22165 nodulation factor ABC transporter ATP-binding protein NodI K09695 nodI; lipooligosaccharide transport system ATP-binding protein D A4R28_10230 multidrug ABC transporter substrate-binding protein K09808 lolC_E; lipoprotein-releasing system permease protein D A4R28_10225 ABC transporter K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D A4R28_23540 transcriptional regulator K02196 ccmD; heme exporter protein D D A4R28_04430 heme transporter HemC K02195 ccmC; heme exporter protein C D A4R28_23545 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D A4R28_23550 heme ABC transporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D A4R28_03370 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D A4R28_03365 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D A4R28_17955 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D A4R28_18970 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D A4R28_18965 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D A4R28_27565 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D A4R28_13365 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D A4R28_24635 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D A4R28_14255 multidrug ABC transporter K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D A4R28_14260 multidrug ABC transporter K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D A4R28_33205 ABC transporter ATP-binding protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D A4R28_03155 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D A4R28_15970 multidrug ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D A4R28_15975 multidrug ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D A4R28_16655 Fe3+/spermidine/putrescine ABC transporter ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D A4R28_32755 type I secretion protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D A4R28_00010 peptidase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D A4R28_00340 type I secretion protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D A4R28_09995 type I secretion protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D A4R28_16500 peptide ABC transporter K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D A4R28_19065 glycosyl transferase family 1 K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D A4R28_24830 ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:mcic02060] D A4R28_27300 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D A4R28_19295 PTS sugar transporter subunit IIBC K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D A4R28_27305 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D A4R28_26050 serine kinase K02784 ptsH; phosphocarrier protein HPr D A4R28_26045 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D A4R28_19300 PTS cellobiose transporter subunit IIB K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D A4R28_19305 PTS sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D A4R28_19310 PTS beta-glucoside transporter subunit IIABC K02783 srlA; glucitol/sorbitol PTS system EIIC component D A4R28_29140 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D A4R28_29135 PTS galactitol transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D A4R28_29145 DNA mismatch repair protein MutT K02775 gatC; galactitol PTS system EIIC component D A4R28_18650 peptidase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D A4R28_17940 transcriptional regulator K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:mcic03070] D A4R28_09195 transporter K12340 tolC; outer membrane protein D A4R28_33200 secretion protein K11003 hlyD; membrane fusion protein, hemolysin D D A4R28_33205 ABC transporter ATP-binding protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D A4R28_21085 EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein K03222 yscJ; type III secretion protein J D A4R28_21115 ssaR; EscR/YscR/HrcR family type III secretion system export apparatus protein K03226 yscR; type III secretion protein R D A4R28_21120 EscS/YscS/HrcS family type III secretion system export apparatus protein K03227 yscS; type III secretion protein S D A4R28_21125 EscT/YscT/HrcT family type III secretion system export apparatus protein K03228 yscT; type III secretion protein T D A4R28_21130 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K03229 yscU; type III secretion protein U D A4R28_21160 EscV/YscV/HrcV family type III secretion system export apparatus protein K03230 yscV; type III secretion protein V D A4R28_21100 fliI; EscN/YscN/HrcN family type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D A4R28_21110 translocation protein K03225 yscQ; type III secretion protein Q D A4R28_21095 nodulation protein NolV K03223 yscL; type III secretion protein L D A4R28_29235 hypothetical protein K02460 gspK; general secretion pathway protein K D A4R28_09060 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein D A4R28_08550 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D A4R28_07250 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D A4R28_08360 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A4R28_09065 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D A4R28_25205 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A4R28_18755 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A4R28_23505 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D A4R28_24090 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D A4R28_23690 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D A4R28_09115 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D A4R28_09110 twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D A4R28_09105 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D A4R28_32100 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D A4R28_20790 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D A4R28_31205 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG D A4R28_31120 type VI secretion protein K11903 hcp; type VI secretion system secreted protein Hcp D A4R28_31145 type VI secretion lipoprotein K11906 vasD; type VI secretion system protein VasD D A4R28_31160 type VI secretion protein VasK K11891 impL; type VI secretion system protein ImpL D A4R28_31220 type VI secretion protein K11891 impL; type VI secretion system protein ImpL D A4R28_31155 hypothetical protein K11892 impK; type VI secretion system protein ImpK D A4R28_31215 type IV / vi secretion system protein, dotu family K11892 impK; type VI secretion system protein ImpK D A4R28_31100 ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG B B 09132 Signal transduction C 02020 Two-component system [PATH:mcic02020] D A4R28_28630 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D A4R28_19585 DNA-binding response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D A4R28_21900 two-component system response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D A4R28_22710 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D A4R28_19610 phosphonate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D A4R28_22430 protein petR K07660 phoP; two-component system, OmpR family, response regulator PhoP D A4R28_15935 phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D A4R28_15800 two-component sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D A4R28_15795 DNA-binding response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D A4R28_26320 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D A4R28_32900 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D A4R28_02715 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D A4R28_10635 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D A4R28_10545 efflux transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D A4R28_16930 flagellin K02406 fliC; flagellin D A4R28_16935 flagellin K02406 fliC; flagellin D A4R28_16855 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D A4R28_17640 two-component sensor histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D A4R28_17635 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D A4R28_17660 potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D A4R28_17650 potassium-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D A4R28_17645 ATPase K01548 kdpC; potassium-transporting ATPase KdpC subunit D A4R28_03625 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D A4R28_03630 DNA-binding response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D A4R28_17820 tripartite tricarboxylate transporter TctA K07793 tctA; putative tricarboxylic transport membrane protein D A4R28_17860 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D A4R28_17855 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D A4R28_17825 tricarboxylic transporter K07794 tctB; putative tricarboxylic transport membrane protein D A4R28_17830 C4-dicarboxylate ABC transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein D A4R28_17850 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D A4R28_04840 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D A4R28_28385 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D A4R28_26035 histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D A4R28_26030 DNA-binding response regulator K14981 chvI; two-component system, OmpR family, response regulator ChvI D A4R28_12320 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D A4R28_06080 citrate lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D A4R28_21435 citryl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D A4R28_23795 ATP-binding protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D A4R28_05745 triphosphoribosyl-dephospho-CoA synthase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D A4R28_24345 DNA-binding response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D A4R28_18055 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45] D A4R28_28430 fimbrial protein K02651 flp; pilus assembly protein Flp/PilA D A4R28_29480 pilin K02651 flp; pilus assembly protein Flp/PilA D A4R28_18720 pilus assembly protein PilA K02651 flp; pilus assembly protein Flp/PilA D A4R28_19655 fimbrial protein K02651 flp; pilus assembly protein Flp/PilA D A4R28_28440 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D A4R28_29475 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D A4R28_06105 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D A4R28_28445 pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC D A4R28_29470 pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC D A4R28_06110 secretin K02280 cpaC; pilus assembly protein CpaC D A4R28_21030 hypothetical protein K02280 cpaC; pilus assembly protein CpaC D A4R28_28455 CtpF protein K02282 cpaE; pilus assembly protein CpaE D A4R28_29445 pilus assembly protein K02282 cpaE; pilus assembly protein CpaE D A4R28_06120 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE D A4R28_28460 protein kinase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D A4R28_29485 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D A4R28_06125 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D A4R28_28465 pilus assembly protein K12510 tadB; tight adherence protein B D A4R28_29490 type II secretion system protein F K12510 tadB; tight adherence protein B D A4R28_06130 type II secretion system protein F K12510 tadB; tight adherence protein B D A4R28_28470 type II secretion system protein K12511 tadC; tight adherence protein C D A4R28_29495 type II secretion protein F K12511 tadC; tight adherence protein C D A4R28_06135 type II secretion protein F K12511 tadC; tight adherence protein C D A4R28_02395 hypothetical protein K27080 tadG; tight adherence protein G D A4R28_27445 bifunctional uridylyltransferase/uridylyl-removing protein K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D A4R28_08270 transcriptional regulator K04751 glnB; nitrogen regulatory protein P-II 1 D A4R28_08070 two-component sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D A4R28_08065 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D A4R28_26575 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_29255 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_29610 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_01200 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_08275 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_08280 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_17470 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_22970 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_08060 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D A4R28_08055 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D A4R28_28575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_02485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_20025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_01160 two-component sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D A4R28_01165 Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D A4R28_01155 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D A4R28_22150 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D A4R28_17950 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D A4R28_22000 hypothetical protein K03092 rpoN; RNA polymerase sigma-54 factor D A4R28_30110 chemotaxis protein CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D A4R28_16325 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D A4R28_32820 protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D A4R28_30400 methyltransferase K13486 wspC; chemotaxis protein methyltransferase WspC D A4R28_30390 chemotaxis protein K13487 wspA; methyl-accepting chemotaxis protein WspA D A4R28_30395 chemotaxis protein CheW K13488 wspB; chemotaxis-related protein WspB D A4R28_30405 chemotaxis protein CheW K13489 wspD; chemotaxis-related protein WspD D A4R28_30410 hybrid sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D A4R28_30415 chemotaxis response regulator protein-glutamate methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61] D A4R28_30420 diguanylate cyclase response regulator K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65] D A4R28_02745 PAS domain-containing sensor histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D A4R28_07360 two-component sensor histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D A4R28_32250 pleD; diguanylate cyclase response regulator K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D A4R28_06270 pleD; diguanylate cyclase response regulator K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D A4R28_02590 PAS domain-containing sensor histidine kinase K11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3] D A4R28_06265 two-component system response regulator K11443 divK; two-component system, cell cycle response regulator DivK D A4R28_06625 hybrid sensor histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D A4R28_16320 histidine phosphotransferase K13588 chpT; histidine phosphotransferase ChpT D A4R28_16330 DNA-binding response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA D A4R28_17310 MFS transporter K13589 cpdR; two-component system, cell cycle response regulator CpdR D A4R28_30350 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D A4R28_30355 fixJ; DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ D A4R28_30370 transcriptional regulator K15861 fixK; CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein D A4R28_08800 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D A4R28_27370 two-component sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D A4R28_07995 histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D A4R28_27375 two-component system response regulator K15012 regA; two-component system, response regulator RegA D A4R28_07990 two-component system response regulator K15012 regA; two-component system, response regulator RegA D A4R28_31600 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D A4R28_15950 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D A4R28_31605 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D A4R28_15945 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D A4R28_15940 ribosomal protein P2 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D A4R28_28065 cytochrome C K08738 CYC; cytochrome c D A4R28_05615 cytochrome C K08738 CYC; cytochrome c D A4R28_16100 cytochrome C K08738 CYC; cytochrome c D A4R28_30260 peptidase S41 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D A4R28_20715 peptidase S41 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D A4R28_30265 peptidase S41 K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D A4R28_20710 peptidase S41 K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D A4R28_30270 nitrogen fixation protein FixQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D A4R28_20705 nitrogen fixation protein FixQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D A4R28_30275 cytochrome C oxidase Cbb3 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D A4R28_20700 cytochrome C oxidase Cbb3 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D A4R28_32445 cytochrome C K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D A4R28_24305 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D A4R28_24300 cytochrome BD ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D A4R28_09195 transporter K12340 tolC; outer membrane protein D A4R28_33145 sugar ABC transporter substrate-binding protein K01991 wza; polysaccharide biosynthesis/export protein D A4R28_00255 sugar ABC transporter substrate-binding protein K01991 wza; polysaccharide biosynthesis/export protein D A4R28_04810 sugar ABC transporter substrate-binding protein K01991 wza; polysaccharide biosynthesis/export protein D A4R28_04815 chain-length determining protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D A4R28_20235 glycosyl hydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:mcic04148] D A4R28_25990 arginase K01476 rocF; arginase [EC:3.5.3.1] D A4R28_12015 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D A4R28_17100 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D A4R28_31600 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D A4R28_15950 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:mcic02024] D A4R28_08045 RNA chaperone Hfq K03666 hfq; host factor-I protein D A4R28_25885 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D A4R28_06410 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D A4R28_10425 phenazine biosynthesis protein PhzF K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17] D A4R28_17635 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D A4R28_28615 autoinducer synthase K18096 bjaI; acyl-homoserine lactone synthase [EC:2.3.1.228 2.3.1.229 2.3.1.-] D A4R28_32030 autoinducer synthase K18096 bjaI; acyl-homoserine lactone synthase [EC:2.3.1.228 2.3.1.229 2.3.1.-] D A4R28_28610 LuxR family transcriptional regulator K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1 D A4R28_20930 conjugal transfer protein TraI K22955 traI; acyl homoserine lactone synthase [EC:2.3.1.184] D A4R28_20935 transcriptional regulator K19732 traR; LuxR family transcriptional regulator, activator of conjugal transfer of Ti plasmids D A4R28_32090 P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D A4R28_20780 P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D A4R28_32085 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC D A4R28_20775 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC D A4R28_32080 conjugal transfer protein K20529 trbD; type IV secretion system protein TrbD D A4R28_20770 conjugal transfer protein K20529 trbD; type IV secretion system protein TrbD D A4R28_32075 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D A4R28_20765 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D A4R28_32070 conjugal transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D A4R28_20760 conjugal transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D A4R28_32060 conjugal transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D A4R28_20755 conjugal transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D A4R28_32055 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF D A4R28_20750 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF D A4R28_32050 P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D A4R28_20745 P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D A4R28_32045 conjugal transfer protein TraI K20533 trbI; type IV secretion system protein TrbI D A4R28_20740 conjugal transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI D A4R28_27625 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D A4R28_00995 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D A4R28_02650 polyamine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D A4R28_14355 ABC transporter K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D A4R28_14920 hypothetical protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D A4R28_17455 iron ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D A4R28_21465 ABC transporter K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D A4R28_25150 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D A4R28_27640 spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D A4R28_30580 hypothetical protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D A4R28_02660 polyamine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D A4R28_14365 polyamine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D A4R28_14930 hypothetical protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D A4R28_17445 spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D A4R28_21455 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D A4R28_27635 spermidine/putrescine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D A4R28_02655 polyamine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D A4R28_14360 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D A4R28_14925 hypothetical protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D A4R28_17450 acriflavin resistance protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D A4R28_27630 polyamine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D A4R28_02645 spermidine/putrescine ABC transporter K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D A4R28_14370 spermidine/putrescine ABC transporter K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D A4R28_14905 spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D A4R28_17440 spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D A4R28_21460 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D A4R28_25145 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D A4R28_25595 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_26945 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_00375 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_00415 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_00975 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_02815 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_05355 amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_20475 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_25085 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_25510 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_00065 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_14840 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_29105 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_29635 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_31820 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_25585 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_26665 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_26935 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_29645 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_31815 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_00075 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_00390 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_00430 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_00935 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_14845 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_20500 branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D A4R28_25100 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_25505 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_29090 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_25590 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_26940 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_00395 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_00930 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_14850 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein D A4R28_20495 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_25105 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_25500 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_00070 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_00435 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_29085 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_29630 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_31810 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_25575 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_26930 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_29100 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_31805 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_00085 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_00380 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_00420 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_00945 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_14855 hypothetical protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_20490 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_25090 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_25495 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_25580 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_26950 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_29095 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_29640 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_31800 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_00080 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_00385 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_00425 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_00940 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_14860 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_20485 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_25095 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_25490 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_29340 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_27775 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D A4R28_30465 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D A4R28_18155 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D A4R28_00120 TetR family transcriptional regulator K20325 fhrR; TetR/AcrR family transcriptional regulator, Clp-modulated transcription factor D A4R28_04665 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D A4R28_06795 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D A4R28_02405 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D A4R28_02410 ABC transporter K15581 oppB; oligopeptide transport system permease protein D A4R28_02415 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D A4R28_02420 microcin ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D A4R28_26460 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_26480 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_27080 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_28130 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_30715 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_31380 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_00835 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_01425 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_01450 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_02100 diguanylate cyclase K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_04250 diguanylate cyclase K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_07290 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_07545 bicyclomycin resistance protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_09665 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_12295 diguanylate cyclase K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_14230 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_18450 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_21685 ABC transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_24230 diguanylate cyclase K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_25070 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_26475 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_27035 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_28135 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_30710 hypothetical protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_31385 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_32000 glutathione ABC transporter permease GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_00830 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_01445 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_07300 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_09670 peptide ABC transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_12290 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_14225 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_18455 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_21680 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_25065 glutathione ABC transporter permease GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_26470 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_27040 D-ala-D-ala transporter subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_28140 D-ala-D-ala transporter subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_30705 hypothetical protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_31390 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_31995 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_00825 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_01440 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_07295 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_09675 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_12285 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_14220 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_18460 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_21675 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_25060 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_26465 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_27045 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_28145 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_30690 glutathione ABC transporter ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_31395 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_00820 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_01435 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_07305 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_09680 microcin ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_12280 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_14245 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_18465 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_21670 dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_25080 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_27050 dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D A4R28_28150 ABC transporter K02032 ddpF; peptide/nickel transport system ATP-binding protein D A4R28_31985 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D A4R28_00815 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D A4R28_07310 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D A4R28_18470 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D A4R28_25205 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A4R28_09060 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein D A4R28_08550 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D A4R28_07250 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D A4R28_08360 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A4R28_09065 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D A4R28_18755 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A4R28_23505 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D A4R28_24090 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D A4R28_23690 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:mcic02030] D A4R28_25810 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_26910 ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_30905 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_31760 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D A4R28_00165 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_00205 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_05045 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_12395 ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_12440 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_12525 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_14335 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_18240 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_18530 transporter K10439 rbsB; ribose transport system substrate-binding protein D A4R28_19245 ABC transporter K10439 rbsB; ribose transport system substrate-binding protein D A4R28_19875 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_23085 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_25445 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_00590 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_00765 ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_14170 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D A4R28_14535 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D A4R28_30875 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_27780 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D A4R28_27895 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D A4R28_16325 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D A4R28_32820 protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D A4R28_30110 chemotaxis protein CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D A4R28_16840 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D A4R28_16850 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D A4R28_16845 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D A4R28_16855 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D A4R28_16950 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D A4R28_20335 hypothetical protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:mcic02040] D A4R28_16890 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D A4R28_16940 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D A4R28_16840 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D A4R28_16870 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D A4R28_16920 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D A4R28_16850 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D A4R28_16845 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D A4R28_16925 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D A4R28_17005 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D A4R28_17030 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D A4R28_17025 flhA; EscV/YscV/HrcV family type III secretion system export apparatus protein K02400 flhA; flagellar biosynthesis protein FlhA D A4R28_16835 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D A4R28_16900 flagellar biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D A4R28_16880 flgB; flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D A4R28_16885 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D A4R28_17000 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD D A4R28_16975 flagellar biosynthesis protein FlgE K02390 flgE; flagellar hook protein FlgE D A4R28_16865 flgF; flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D A4R28_16895 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D A4R28_16915 flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D A4R28_16905 flagellar biosynthesis protein FlgI K02394 flgI; flagellar P-ring protein FlgI D A4R28_17075 flagellar biosynthesis protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D A4R28_16980 flgK; flagellar biosynthesis protein FlgK K02396 flgK; flagellar hook-associated protein 1 D A4R28_16985 flagellar biosynthesis protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D A4R28_16930 flagellin K02406 fliC; flagellin D A4R28_16935 flagellin K02406 fliC; flagellin D A4R28_16855 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D A4R28_16950 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D A4R28_20335 hypothetical protein K02557 motB; chemotaxis protein MotB D A4R28_16955 chemotaxis protein MotC K10564 motC; chemotaxis protein MotC D A4R28_16960 chemotaxis protein MotD K10565 motD; chemotaxis protein MotD D A4R28_20080 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D A4R28_15095 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D A4R28_17950 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D A4R28_22000 hypothetical protein K03092 rpoN; RNA polymerase sigma-54 factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D A4R28_08140 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:mcic04980] D A4R28_18825 cob(I)yrinic acid a c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D A4R28_02510 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D A4R28_02515 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D A4R28_29115 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D A4R28_09795 methionine synthase I K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D A4R28_09915 methyltetrahydrofolate--corrinoid methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:mcic01501] D A4R28_09130 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D A4R28_02405 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D A4R28_02410 ABC transporter K15581 oppB; oligopeptide transport system permease protein D A4R28_02415 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D A4R28_02420 microcin ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D A4R28_13325 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A4R28_19415 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A4R28_13320 aminoglycoside/multidrug transporter subunit AcrD K18138 acrB; multidrug efflux pump D A4R28_19420 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D A4R28_09195 transporter K12340 tolC; outer membrane protein D A4R28_02625 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A4R28_08785 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A4R28_18120 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A4R28_11050 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D A4R28_06030 class D beta-lactamase K17838 oxa; beta-lactamase class D [EC:3.5.2.6] C 01502 Vancomycin resistance [PATH:mcic01502] D A4R28_12320 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D A4R28_11005 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A4R28_12945 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A4R28_21605 hypothetical protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A4R28_20565 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D A4R28_11040 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D A4R28_11035 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D A4R28_11020 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:mcic01503] D A4R28_22430 protein petR K07660 phoP; two-component system, OmpR family, response regulator PhoP D A4R28_08790 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D A4R28_26320 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D A4R28_32900 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D A4R28_02715 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D A4R28_10635 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D A4R28_13325 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A4R28_19415 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A4R28_13320 aminoglycoside/multidrug transporter subunit AcrD K18138 acrB; multidrug efflux pump D A4R28_19420 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D A4R28_09195 transporter K12340 tolC; outer membrane protein D A4R28_07165 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:mcic01000] C 01001 Protein kinases [BR:mcic01001] D A4R28_21250 phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D A4R28_31230 serine/threonine protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1] D A4R28_04815 chain-length determining protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D A4R28_27245 chain-length determining protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D A4R28_33160 hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D A4R28_00310 exopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D A4R28_13700 lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D A4R28_28630 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D A4R28_15800 two-component sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D A4R28_17640 two-component sensor histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D A4R28_03625 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D A4R28_26035 histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D A4R28_21205 hypothetical protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D A4R28_08070 two-component sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D A4R28_08060 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D A4R28_01160 two-component sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D A4R28_30410 hybrid sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D A4R28_02745 PAS domain-containing sensor histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D A4R28_07360 two-component sensor histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D A4R28_02590 PAS domain-containing sensor histidine kinase K11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3] D A4R28_06625 hybrid sensor histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D A4R28_30350 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D A4R28_27370 two-component sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D A4R28_07995 histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:mcic01009] D A4R28_26055 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D A4R28_10625 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:mcic01002] D A4R28_18015 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D A4R28_28435 peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D A4R28_29505 peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D A4R28_29920 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D A4R28_23150 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D A4R28_26640 gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 K07010; putative glutamine amidotransferase D A4R28_03250 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D A4R28_17280 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D A4R28_31835 sugar isomerase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D A4R28_06380 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D A4R28_24840 aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D A4R28_27155 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D A4R28_30455 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D A4R28_00235 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D A4R28_00315 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D A4R28_00210 protease K05520 yhbO; deglycase [EC:3.5.1.124] D A4R28_23850 protease K05520 yhbO; deglycase [EC:3.5.1.124] D A4R28_04640 amidase K21470 ycbB; L,D-transpeptidase YcbB D A4R28_07480 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB D A4R28_23685 abortive phage infection protein K07052 K07052; CAAX protease family protein D A4R28_02750 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D A4R28_22785 peptidase M3 K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D A4R28_17190 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D A4R28_12320 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D A4R28_04130 zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-] D A4R28_04135 zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-] D A4R28_28480 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D A4R28_03375 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D A4R28_07280 peptidase M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D A4R28_19460 peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D A4R28_00840 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D A4R28_09660 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D A4R28_25350 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D A4R28_02635 peptidase M20 K12941 abgB; aminobenzoyl-glutamate utilization protein B D A4R28_05915 type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D A4R28_10945 X-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D A4R28_01575 peptidase M29 K19689 ampS; aminopeptidase [EC:3.4.11.-] D A4R28_20350 peptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D A4R28_20185 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D A4R28_22645 protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D A4R28_07145 RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D A4R28_24625 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D A4R28_29735 aminopeptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19] D A4R28_26320 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D A4R28_32900 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D A4R28_02715 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D A4R28_10635 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D A4R28_09745 peptidase S9 K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D A4R28_02565 peptidase S9 K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D A4R28_07665 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D A4R28_31565 beta-lactam-binding protein K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D A4R28_31560 beta-lactam-binding protein K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D A4R28_04955 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D A4R28_06730 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D A4R28_04965 endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D A4R28_07195 repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D A4R28_02965 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D A4R28_03105 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D A4R28_20580 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D A4R28_21495 penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11] D A4R28_17970 Clp protease K04773 sppA; protease IV [EC:3.4.21.-] D A4R28_18830 rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein D A4R28_25960 HslU--HslV peptidase proteolytic subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D A4R28_28895 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D A4R28_25140 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D A4R28_04170 modulator protein K03592 pmbA; PmbA protein D A4R28_01940 tldD; metalloprotease TldD K03568 tldD; TldD protein D A4R28_12310 hypothetical protein K06894 yfhM; alpha-2-macroglobulin D A4R28_10645 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D A4R28_10650 protease modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:mcic01003] D A4R28_28670 ceramide glucosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80] D A4R28_15805 alpha-mannosyltransferase K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] D A4R28_02375 starch synthase K00703 glgA; starch synthase [EC:2.4.1.21] D A4R28_22170 chitooligosaccharide synthase NodC K14666 nodC; N-acetylglucosaminyltransferase [EC:2.4.1.-] D A4R28_19825 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D A4R28_12315 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D A4R28_02625 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A4R28_08785 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A4R28_18120 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A4R28_04420 protein ndvB K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397] D A4R28_27225 succinoglycan biosynthesis protein exoa K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-] D A4R28_27220 glycosyl transferase family 1 K16558 exoL; succinoglycan biosynthesis protein ExoL [EC:2.-.-.-] D A4R28_27230 glycosyl transferase family A K16556 exoM; succinoglycan biosynthesis protein ExoM [EC:2.4.-.-] D A4R28_27235 glycosyl transferase K16555 exoO; succinoglycan biosynthesis protein ExoO [EC:2.4.-.-] D A4R28_27175 glycosyl transferase family A K16564 exoU; succinoglycan biosynthesis protein ExoU [EC:2.4.-.-] D A4R28_12205 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] C 01005 Lipopolysaccharide biosynthesis proteins [BR:mcic01005] D A4R28_07165 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D A4R28_07175 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D A4R28_10985 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D A4R28_07155 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D A4R28_07170 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D A4R28_04195 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D A4R28_09650 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D A4R28_04190 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D A4R28_08155 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D A4R28_28070 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D A4R28_17250 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D A4R28_15510 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D A4R28_15505 lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D A4R28_02300 ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26] D A4R28_02135 glycosyl transferase family 9 K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D A4R28_13660 glycosyl transferase family 9 K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D A4R28_31890 glycosyl transferase family 9 K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D A4R28_15475 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D A4R28_15470 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D A4R28_15480 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D A4R28_15500 ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D A4R28_28745 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D A4R28_32710 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D A4R28_02290 lipid carrier--UDP-N-acetylgalactosaminyltransferase K13012 wbqP; O-antigen biosynthesis protein WbqP C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:mcic01011] D A4R28_29035 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D A4R28_11010 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D A4R28_11015 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D A4R28_11030 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D A4R28_11045 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D A4R28_11005 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A4R28_12945 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A4R28_21605 hypothetical protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A4R28_20565 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D A4R28_05200 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D A4R28_11035 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D A4R28_11020 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D A4R28_05500 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D A4R28_24605 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D A4R28_24360 phosphoesterase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D A4R28_27440 lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D A4R28_02625 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A4R28_08785 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A4R28_18120 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A4R28_12315 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D A4R28_11050 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D A4R28_07665 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D A4R28_31565 beta-lactam-binding protein K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D A4R28_31560 beta-lactam-binding protein K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D A4R28_19825 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D A4R28_04640 amidase K21470 ycbB; L,D-transpeptidase YcbB D A4R28_07480 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB D A4R28_12320 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D A4R28_24625 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D A4R28_02905 lytic transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D A4R28_24105 transglycosylase K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D A4R28_17265 lytic transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D A4R28_03330 4-amino-4-deoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D A4R28_07660 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D A4R28_24135 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D A4R28_08790 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:mcic01004] D A4R28_03310 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D A4R28_04750 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D A4R28_20990 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D A4R28_28335 beta-ketoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D A4R28_31175 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D A4R28_03325 beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A4R28_09635 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A4R28_09640 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A4R28_25555 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A4R28_29225 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_00135 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_03315 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_05035 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_06480 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_07475 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_13465 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_16200 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_25165 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A4R28_28340 beta-hydroxydecanoyl-ACP dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D A4R28_07160 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D A4R28_28330 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D A4R28_01830 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D A4R28_23595 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D A4R28_23275 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D A4R28_15620 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D A4R28_18055 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45] D A4R28_22610 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A4R28_27260 prpE; propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D A4R28_29315 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D A4R28_27775 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D A4R28_30465 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D A4R28_29850 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D A4R28_04745 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D A4R28_06945 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D A4R28_18995 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:mcic01008] D A4R28_01195 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:mcic01006] D A4R28_19830 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D A4R28_01705 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D A4R28_07135 di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D A4R28_09050 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D A4R28_10620 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D A4R28_01775 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D A4R28_01960 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:mcic01007] D A4R28_28595 lysK; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D A4R28_06465 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A4R28_07185 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A4R28_18800 tRNA glutamyl-Q synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D A4R28_05085 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D A4R28_27435 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D A4R28_03085 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D A4R28_09140 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D A4R28_07680 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D A4R28_04105 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D A4R28_09185 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D A4R28_22575 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D A4R28_04525 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D A4R28_29835 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D A4R28_01735 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D A4R28_01740 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D A4R28_09100 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D A4R28_10235 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D A4R28_06035 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D A4R28_05175 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D A4R28_26175 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D A4R28_26185 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D A4R28_14755 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_15425 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_17145 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D A4R28_08030 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D A4R28_05970 aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D A4R28_10095 aspartate aminotransferase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84] D A4R28_32015 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_02865 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_14305 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_14635 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_19030 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_21975 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A4R28_04300 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D A4R28_28830 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D A4R28_20975 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D A4R28_12170 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D A4R28_28650 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D A4R28_28175 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D A4R28_21735 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D A4R28_21800 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D A4R28_21810 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D A4R28_09740 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D A4R28_24985 hypothetical protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D A4R28_20985 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D A4R28_26580 aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D A4R28_27075 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D A4R28_14915 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D A4R28_08050 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D A4R28_02535 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A4R28_15785 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A4R28_00650 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D A4R28_16470 serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D A4R28_20155 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:mcic00194] D A4R28_22520 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D A4R28_22525 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D A4R28_22530 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D A4R28_22535 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D A4R28_22540 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D A4R28_01645 ATP F0F1 synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b D A4R28_01650 ATP F0F1 synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D A4R28_01640 ATP F0F1 synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D A4R28_01635 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D A4R28_01630 ATP F0F1 synthase subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:mcic03000] D A4R28_25040 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D A4R28_33005 AraC family transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE D A4R28_28935 AraC family transcriptional regulator K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein D A4R28_04930 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator D A4R28_03990 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator D A4R28_09075 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator D A4R28_13060 6-O-methylguanine DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D A4R28_17875 6-O-methylguanine DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D A4R28_26260 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D A4R28_29200 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D A4R28_25660 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D A4R28_02640 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D A4R28_03030 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D A4R28_06020 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D A4R28_13010 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D A4R28_13455 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D A4R28_23210 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D A4R28_25525 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D A4R28_04210 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D A4R28_07275 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D A4R28_14710 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D A4R28_16765 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D A4R28_01025 LysR family transcriptional regulator K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator D A4R28_15140 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D A4R28_22135 LysR family transcriptional regulator K14657 nodD; LysR family transcriptional regulator, nod-box dependent transcriptional activator D A4R28_21415 transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D A4R28_05670 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D A4R28_00640 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D A4R28_01430 transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D A4R28_31365 hypothetical protein K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D A4R28_27600 DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D A4R28_06850 DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D A4R28_01090 DeoR family transcriptional regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D A4R28_25805 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A4R28_25915 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A4R28_26420 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A4R28_01495 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A4R28_12625 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A4R28_14075 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A4R28_17355 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A4R28_18195 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A4R28_22145 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A4R28_25430 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A4R28_12400 transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D A4R28_18260 phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D A4R28_04385 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D A4R28_14285 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D A4R28_14515 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D A4R28_24845 phage tail protein K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D A4R28_12715 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D A4R28_29790 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D A4R28_31745 hypothetical protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D A4R28_06285 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D A4R28_14695 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D A4R28_31790 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D A4R28_31795 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D A4R28_31020 GntR family transcriptional regulator K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor D A4R28_27755 2-aminoadipate aminotransferase K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D A4R28_12985 transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D A4R28_02480 transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D A4R28_03855 transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D A4R28_26790 TetR family transcriptional regulator K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D A4R28_12165 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D A4R28_12175 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D A4R28_25560 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D A4R28_27540 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D A4R28_29125 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D A4R28_00120 TetR family transcriptional regulator K20325 fhrR; TetR/AcrR family transcriptional regulator, Clp-modulated transcription factor D A4R28_24430 TetR family transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D A4R28_09570 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A4R28_10785 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A4R28_20295 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A4R28_21585 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A4R28_21730 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A4R28_25295 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A4R28_03580 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A4R28_08195 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A4R28_12115 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A4R28_29675 AsnC family transcriptional regulator K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes D A4R28_21400 ArsR family transcriptional regulator K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes D A4R28_27525 transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D A4R28_07380 ArsR family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D A4R28_15045 AsnC family transcriptional regulator K26601 azlB; Lrp/AsnC family transcriptional regulator, repressor for azl operon D A4R28_28610 LuxR family transcriptional regulator K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1 D A4R28_20935 transcriptional regulator K19732 traR; LuxR family transcriptional regulator, activator of conjugal transfer of Ti plasmids D A4R28_04280 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D A4R28_25450 MarR family transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator D A4R28_29560 MarR family transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator D A4R28_15875 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D A4R28_23390 ArsR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D A4R28_27410 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D A4R28_15990 redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D A4R28_18155 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D A4R28_28345 transcriptional repressor K09826 irr; Fur family transcriptional regulator, iron response regulator D A4R28_08625 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D A4R28_22960 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D A4R28_30250 transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D A4R28_20720 transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D A4R28_30370 transcriptional regulator K15861 fixK; CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein D A4R28_30325 Crp/Fnr family transcriptional regulator K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator D A4R28_09515 rirA; iron-responsive transcriptional regulator K13772 rirA; Rrf2 family transcriptional regulator, iron-responsive regulator D A4R28_13960 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D A4R28_03150 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D A4R28_32620 hypothetical protein K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator D A4R28_29280 Cro/Cl family transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D A4R28_15235 transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D A4R28_19890 RpiR family transcriptional regulator K23238 rpiR; RpiR family transcriptional regulator, repressor of rpiB and als operon D A4R28_10255 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D A4R28_13050 XRE family transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D A4R28_10670 LysR family transcriptional regulator K02019 modE; molybdate transport system regulatory protein D A4R28_08510 transcriptional regulator K07727 K07727; putative transcriptional regulator D A4R28_09565 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D A4R28_19135 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D A4R28_31000 plasmid partitioning protein RepB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A4R28_32245 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A4R28_24020 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A4R28_20050 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D A4R28_24555 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D A4R28_20560 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D A4R28_05105 transcriptional regulator K07734 paiB; transcriptional regulator D A4R28_29650 transcriptional regulator K07734 paiB; transcriptional regulator D A4R28_02020 hypothetical protein K07735 algH; putative transcriptional regulator D A4R28_06615 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D A4R28_04660 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D A4R28_11065 cell division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ D A4R28_09170 exopolysaccharide production negative regulator K25885 exoR; exopolysaccharide production negative regulator C 03021 Transcription machinery [BR:mcic03021] D A4R28_08340 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D A4R28_08520 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D A4R28_08515 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D A4R28_02935 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D A4R28_32925 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D A4R28_15095 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D A4R28_14150 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A4R28_27950 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A4R28_26450 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A4R28_03005 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A4R28_03755 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A4R28_09810 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A4R28_11605 hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A4R28_16730 hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A4R28_18860 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A4R28_19525 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A4R28_24525 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A4R28_25275 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A4R28_07985 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A4R28_31325 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A4R28_11625 hypothetical protein K03089 rpoH; RNA polymerase sigma-32 factor D A4R28_19680 RNA polymerase subunit sigma-70 K03089 rpoH; RNA polymerase sigma-32 factor D A4R28_20085 RNA polymerase subunit sigma-70 K03089 rpoH; RNA polymerase sigma-32 factor D A4R28_17950 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D A4R28_22000 hypothetical protein K03092 rpoN; RNA polymerase sigma-54 factor D A4R28_28280 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D A4R28_04690 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D A4R28_08545 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D A4R28_06615 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D A4R28_15515 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D A4R28_24050 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:mcic03019] D A4R28_08795 ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D A4R28_02970 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D A4R28_10250 MBL fold metallo-hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D A4R28_06345 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D A4R28_08250 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D A4R28_23730 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D A4R28_22460 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D A4R28_08140 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A4R28_28315 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D A4R28_24050 transcription termination factor Rho K03628 rho; transcription termination factor Rho D A4R28_24800 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D A4R28_03950 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4R28_13140 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4R28_14035 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4R28_20885 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4R28_08045 RNA chaperone Hfq K03666 hfq; host factor-I protein D A4R28_03815 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D A4R28_28625 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D A4R28_04605 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D A4R28_16015 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D A4R28_20570 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D A4R28_27365 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:mcic03011] D A4R28_26805 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D A4R28_07100 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D A4R28_08430 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D A4R28_05215 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D A4R28_08375 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D A4R28_03295 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D A4R28_08480 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D A4R28_08390 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D A4R28_04880 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D A4R28_08465 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D A4R28_08345 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D A4R28_08485 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D A4R28_08350 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D A4R28_08395 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D A4R28_28310 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D A4R28_23700 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D A4R28_08415 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D A4R28_03290 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D A4R28_08440 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D A4R28_28390 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D A4R28_17610 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D A4R28_08535 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D A4R28_08445 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D A4R28_08460 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D A4R28_08455 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D A4R28_08400 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D A4R28_08385 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D A4R28_03285 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D A4R28_08530 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D A4R28_08540 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D A4R28_08525 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D A4R28_04885 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D A4R28_08410 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D A4R28_08365 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D A4R28_08425 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D A4R28_08335 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D A4R28_08380 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D A4R28_23400 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D A4R28_26170 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D A4R28_20650 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D A4R28_08435 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D A4R28_08450 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D A4R28_08405 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D A4R28_20645 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D A4R28_19100 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D A4R28_08420 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D A4R28_08370 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D A4R28_20360 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D A4R28_19820 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D A4R28_06320 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D A4R28_26165 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D A4R28_19915 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D A4R28_15890 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D A4R28_18540 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A4R28_18560 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A4R28_18545 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:mcic03009] D A4R28_02970 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D A4R28_02975 GTPase Era K03595 era; GTPase D A4R28_20625 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D A4R28_06615 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D A4R28_28280 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D A4R28_04690 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D A4R28_08545 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D A4R28_03345 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D A4R28_29905 MFS transporter K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D A4R28_22650 MFS transporter K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D A4R28_28320 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D A4R28_04125 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D A4R28_29765 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D A4R28_24030 16S rRNA methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D A4R28_11060 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D A4R28_24595 rRNA (cytidine-2'-O-)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D A4R28_01920 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D A4R28_08605 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D A4R28_04485 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D A4R28_20590 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D A4R28_18005 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D A4R28_03445 lactate dehydrogenase K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D A4R28_23630 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D A4R28_01925 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D A4R28_04120 RNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D A4R28_13860 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D A4R28_08305 RNA pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D A4R28_19675 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D A4R28_28220 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D A4R28_02030 GCN5 family acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D A4R28_23415 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D A4R28_07615 ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D A4R28_10940 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D A4R28_08795 ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D A4R28_06975 crossover junction endodeoxyribonuclease RuvA K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D A4R28_23730 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D A4R28_01070 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D A4R28_01610 ribosome biogenesis GTPase Der K03977 engA; GTPase D A4R28_08040 GTPase HflX K03665 hflX; GTPase D A4R28_01760 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D A4R28_02940 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D A4R28_28295 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D A4R28_28275 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D A4R28_20595 ribosome silencing factor RsfS K09710 ybeB; ribosome-associated protein D A4R28_28240 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D A4R28_17945 hypothetical protein K05808 hpf; ribosome hibernation promoting factor D A4R28_15900 redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:mcic03016] D A4R28_12085 ribonuclease K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] D A4R28_06465 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A4R28_07185 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A4R28_10235 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D A4R28_04105 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D A4R28_22575 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D A4R28_07680 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D A4R28_09140 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D A4R28_04525 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D A4R28_05175 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D A4R28_06035 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D A4R28_09100 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D A4R28_03085 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D A4R28_09185 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D A4R28_29835 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D A4R28_26175 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D A4R28_26185 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D A4R28_05085 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D A4R28_27435 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D A4R28_08230 Ala-tRNA(Pro) hydrolase K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-] D A4R28_07065 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D A4R28_28270 tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D A4R28_12035 tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D A4R28_25360 tRNA pseudouridine(38,39,40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D A4R28_28300 truB; tRNA pseudouridine(55) synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D A4R28_05115 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A4R28_22050 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A4R28_01760 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D A4R28_10620 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D A4R28_24040 tRNA uridine(34) 5-carboxymethylaminomethyl synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D A4R28_24035 tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D A4R28_02320 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D A4R28_25200 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D A4R28_11955 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D A4R28_24560 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D A4R28_04510 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D A4R28_18140 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5] D A4R28_23600 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D A4R28_01555 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D A4R28_28595 lysK; lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D A4R28_01735 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D A4R28_01740 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D A4R28_18800 tRNA glutamyl-Q synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D A4R28_23840 DNA-binding protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D A4R28_04115 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D A4R28_07340 tRNA dihydrouridine synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D A4R28_08075 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D A4R28_28230 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D A4R28_23500 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D A4R28_30025 methyltransferase, TIGR04290 family K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D A4R28_05195 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D A4R28_09025 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D A4R28_23410 tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D A4R28_15985 tRNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D A4R28_18010 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D A4R28_16355 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D A4R28_05220 tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D A4R28_19200 response regulator SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D A4R28_05145 Fe-S cluster assembly scaffold SufA K13628 iscA; iron-sulfur cluster assembly protein D A4R28_22045 hypothetical protein K13628 iscA; iron-sulfur cluster assembly protein D A4R28_03050 aminomethyltransferase K06980 ygfZ; tRNA-modifying protein YgfZ D A4R28_06800 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D A4R28_21955 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D A4R28_21950 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D A4R28_21945 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D A4R28_04265 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D A4R28_24615 epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D A4R28_06810 tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D A4R28_20190 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D A4R28_28215 tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D A4R28_23180 tRNA N6-adenosine(37)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D A4R28_06345 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D A4R28_28315 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:mcic03012] D A4R28_28290 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D A4R28_26155 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D A4R28_03565 glycosyl transferase family 1 K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D A4R28_07105 elongation factor Ts K02357 tsf; elongation factor Ts D A4R28_08470 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D A4R28_08575 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D A4R28_08475 fusA; elongation factor G K02355 fusA; elongation factor G D A4R28_15440 elongation factor G K02355 fusA; elongation factor G D A4R28_18645 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D A4R28_07130 ribosome recycling factor K02838 frr; ribosome recycling factor D A4R28_30480 methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D A4R28_00250 methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D A4R28_18640 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D A4R28_15895 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D A4R28_29010 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D A4R28_04150 elongation factor P K02356 efp; elongation factor P D A4R28_20315 elongation factor P K02356 efp; elongation factor P D A4R28_04155 EF-P lysine aminoacylase GenX K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D A4R28_08780 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D A4R28_27550 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D A4R28_26020 peptide chain release factor I K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:mcic03110] D A4R28_07055 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D A4R28_18630 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D A4R28_04960 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D A4R28_25940 HslU--HslV peptidase ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D A4R28_24800 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D A4R28_28535 heat-shock protein K04046 yegD; hypothetical chaperone protein D A4R28_03950 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4R28_13140 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4R28_14035 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4R28_20885 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4R28_24795 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D A4R28_11970 molecular chaperone DjlA K05801 djlA; DnaJ like chaperone protein D A4R28_28660 hslO; Hsp33-like chaperonin K04083 hslO; molecular chaperone Hsp33 D A4R28_18040 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D A4R28_32915 molecular chaperone Hsp20 K13993 HSP20; HSP20 family protein D A4R28_14110 molecular chaperone Hsp20 K13993 HSP20; HSP20 family protein D A4R28_32910 molecular chaperone Hsp20 K04080 ibpA; molecular chaperone IbpA D A4R28_09385 heat-shock protein K04080 ibpA; molecular chaperone IbpA D A4R28_17290 molecular chaperone K04080 ibpA; molecular chaperone IbpA D A4R28_20040 RNA-binding protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D A4R28_03955 co-chaperone GroES K04078 groES; chaperonin GroES D A4R28_13145 co-chaperone GroES K04078 groES; chaperonin GroES D A4R28_26320 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D A4R28_32900 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D A4R28_02715 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D A4R28_10635 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D A4R28_20185 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D A4R28_01635 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D A4R28_24090 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D A4R28_18210 hypothetical protein K09796 pccA; periplasmic copper chaperone A D A4R28_18215 hypothetical protein K09796 pccA; periplasmic copper chaperone A D A4R28_07240 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D A4R28_18750 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D A4R28_03355 molecular chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D A4R28_26085 thiol reductase thioredoxin K03671 TXN; thioredoxin D A4R28_23835 co-chaperone YbbN K05838 ybbN; putative thioredoxin D A4R28_18705 glutaredoxin K03676 grxC; glutaredoxin 3 D A4R28_05240 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D A4R28_23535 thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:mcic04131] D A4R28_03520 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D A4R28_19725 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A4R28_19710 gapA; erythrose-4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A4R28_24645 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D A4R28_19930 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D A4R28_22665 MFS transporter K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:mcic03032] D A4R28_02000 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D A4R28_04970 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D A4R28_11675 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D A4R28_04755 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D A4R28_17975 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D A4R28_28385 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D A4R28_03265 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D A4R28_15100 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D A4R28_30995 replication initiation protein RepC K18996 repC; replication initiation protein RepC D A4R28_06750 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4R28_11825 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4R28_06220 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A4R28_28380 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A4R28_11535 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A4R28_11810 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A4R28_03380 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D A4R28_24005 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A4R28_07675 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A4R28_24085 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A4R28_28100 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A4R28_01655 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D A4R28_18150 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A4R28_10965 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D A4R28_06775 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D A4R28_26725 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D A4R28_04535 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D A4R28_06100 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D A4R28_06350 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D A4R28_16740 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:mcic03036] D A4R28_02970 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D A4R28_19725 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A4R28_04970 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D A4R28_11675 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D A4R28_04755 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D A4R28_17975 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D A4R28_28385 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D A4R28_07555 DNA-binding protein K11940 hspQ; heat shock protein HspQ D A4R28_08045 RNA chaperone Hfq K03666 hfq; host factor-I protein D A4R28_09570 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A4R28_10785 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A4R28_20295 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A4R28_21585 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A4R28_21730 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A4R28_25295 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A4R28_03580 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A4R28_08195 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A4R28_12115 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A4R28_02080 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D A4R28_09125 chromosome segregation protein ScpA K05896 scpA; segregation and condensation protein A D A4R28_09120 SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D A4R28_22400 segregation and condensation protein B K06024 scpB; segregation and condensation protein B D A4R28_30970 segregation and condensation protein B K06024 scpB; segregation and condensation protein B D A4R28_10995 cell division protein FtsA K03590 ftsA; cell division protein FtsA D A4R28_18965 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D A4R28_11050 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D A4R28_22565 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D A4R28_23255 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D A4R28_11055 hypothetical protein K03586 ftsL; cell division protein FtsL D A4R28_11000 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D A4R28_11025 cell division protein FtsW K03588 ftsW; cell division protein FtsW D A4R28_18970 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D A4R28_01205 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D A4R28_10990 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D A4R28_19695 cell division protein ZapA K09888 zapA; cell division protein ZapA D A4R28_23480 ATPase K06916 zapE; cell division protein ZapE D A4R28_08790 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D A4R28_13325 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A4R28_19415 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A4R28_13385 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D A4R28_13380 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D A4R28_13375 cell division topological specificity factor K03608 minE; cell division topological specificity factor D A4R28_24025 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D A4R28_31005 plasmid partitioning protein RepA K03496 parA; chromosome partitioning protein D A4R28_31000 plasmid partitioning protein RepB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A4R28_32245 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A4R28_24020 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A4R28_04535 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D A4R28_06100 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D A4R28_24035 tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D A4R28_24030 16S rRNA methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D A4R28_09025 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D A4R28_23420 recombinase XerC K03733 xerC; integrase/recombinase XerC D A4R28_19185 recombinase XerD K04763 xerD; integrase/recombinase XerD D A4R28_27715 sodium:proton antiporter K03593 mrp; ATP-binding protein involved in chromosome partitioning D A4R28_25240 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:mcic03400] D A4R28_13070 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D A4R28_15365 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D A4R28_24450 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D A4R28_02065 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D A4R28_17865 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D A4R28_18730 NTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D A4R28_03075 DNA mismatch repair protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D A4R28_27520 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D A4R28_13060 6-O-methylguanine DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D A4R28_17875 6-O-methylguanine DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D A4R28_26010 alkylated DNA repair dioxygenase K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D A4R28_26565 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D A4R28_02770 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D A4R28_02925 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D A4R28_18795 DNA-3-methyladenine glycosidase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D A4R28_29825 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D A4R28_28400 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D A4R28_30230 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D A4R28_09160 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D A4R28_13630 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D A4R28_23245 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D A4R28_05995 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D A4R28_10965 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D A4R28_18150 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A4R28_06720 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D A4R28_15710 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D A4R28_03495 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D A4R28_03600 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A4R28_10825 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A4R28_08520 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D A4R28_08515 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D A4R28_08340 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D A4R28_02935 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D A4R28_32925 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D A4R28_06405 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D A4R28_31425 DEAD/DEAH box helicase K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D A4R28_27470 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D A4R28_04235 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D A4R28_29740 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D A4R28_01885 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D A4R28_06220 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A4R28_28380 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A4R28_11535 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A4R28_11810 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A4R28_03380 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D A4R28_24005 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A4R28_07675 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A4R28_24085 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A4R28_28100 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A4R28_06750 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4R28_11825 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4R28_05170 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA D A4R28_20250 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D A4R28_20245 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D A4R28_20265 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D A4R28_22555 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D A4R28_03260 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D A4R28_28375 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D A4R28_06395 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D A4R28_02990 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D A4R28_28120 recombination protein RecR K06187 recR; recombination protein RecR D A4R28_10975 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D A4R28_26080 double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D A4R28_26075 double-strand break repair protein AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D A4R28_02520 ATP-binding protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D A4R28_32880 Ku protein K10979 ku; DNA end-binding protein Ku D A4R28_13645 Ku protein K10979 ku; DNA end-binding protein Ku D A4R28_24495 Ku protein K10979 ku; DNA end-binding protein Ku D A4R28_24490 DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D A4R28_06775 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D A4R28_26725 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D A4R28_06350 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D A4R28_16740 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D A4R28_04970 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D A4R28_11675 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D A4R28_04755 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D A4R28_17975 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D A4R28_22460 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D A4R28_06240 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D A4R28_13090 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D A4R28_07195 repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D A4R28_32360 damage-inducible protein K14160 imuA; protein ImuA D A4R28_23810 hypothetical protein K14160 imuA; protein ImuA D A4R28_32355 nucleotidyltransferase K14161 imuB; protein ImuB D A4R28_23815 DNA repair protein K14161 imuB; protein ImuB D A4R28_32350 dnaE2; error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D A4R28_23820 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D A4R28_28495 DNA ligase-associated DEXH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D A4R28_05820 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:mcic03029] D A4R28_31605 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D A4R28_15945 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D A4R28_28290 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D A4R28_26155 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D A4R28_07105 elongation factor Ts K02357 tsf; elongation factor Ts D A4R28_08470 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D A4R28_08575 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D A4R28_08475 fusA; elongation factor G K02355 fusA; elongation factor G D A4R28_15440 elongation factor G K02355 fusA; elongation factor G D A4R28_04735 ubiquinol-cytochrome C chaperone K17662 CBP3; cytochrome b pre-mRNA-processing protein 3 D A4R28_20035 helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6] D A4R28_02975 GTPase Era K03595 era; GTPase D A4R28_05085 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D A4R28_22575 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D A4R28_04525 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D A4R28_09140 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D A4R28_07000 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D A4R28_18375 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D A4R28_21595 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D A4R28_08880 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D A4R28_06990 asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D A4R28_06750 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4R28_11825 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A4R28_07150 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D A4R28_24800 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D A4R28_18040 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D A4R28_03950 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4R28_13140 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4R28_14035 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4R28_20885 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4R28_03955 co-chaperone GroES K04078 groES; chaperonin GroES D A4R28_13145 co-chaperone GroES K04078 groES; chaperonin GroES D A4R28_24795 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D A4R28_05115 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A4R28_22050 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A4R28_05240 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D A4R28_27715 sodium:proton antiporter K03593 mrp; ATP-binding protein involved in chromosome partitioning D A4R28_23775 FAD-dependent oxidoreductase K18166 FOXRED1; FAD-dependent oxidoreductase domain-containing protein 1 D A4R28_01960 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D A4R28_01965 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D A4R28_04840 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D A4R28_25205 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A4R28_01985 cytochrome c oxidase assembly protein K14998 SURF1; surfeit locus 1 family protein D A4R28_08025 Surfeit locus 1 family protein K14998 SURF1; surfeit locus 1 family protein D A4R28_10935 cytochrome c oxidase assembly protein K07152 SCO1; protein SCO1 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:mcic02000] D A4R28_27565 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D A4R28_13365 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D A4R28_24635 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D A4R28_14255 multidrug ABC transporter K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D A4R28_14260 multidrug ABC transporter K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D A4R28_04425 cyclic beta-1,2-glucan ABC transporter K24819 ndvA; ATP-binding cassette, subfamily B, beta-glucan exporter [EC:7.5.2.3] D A4R28_33205 ABC transporter ATP-binding protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D A4R28_03155 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D A4R28_15970 multidrug ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D A4R28_15975 multidrug ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D A4R28_06455 multidrug ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D A4R28_20355 ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D A4R28_21830 multidrug ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D A4R28_22905 multidrug ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D A4R28_16655 Fe3+/spermidine/putrescine ABC transporter ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D A4R28_32755 type I secretion protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D A4R28_00010 peptidase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D A4R28_00340 type I secretion protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D A4R28_09995 type I secretion protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D A4R28_16500 peptide ABC transporter K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D A4R28_27145 ABC transporter ATP-binding protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial D A4R28_19065 glycosyl transferase family 1 K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D A4R28_24830 ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D A4R28_20115 elongation factor 3 K15738 uup; ABC transport system ATP-binding/permease protein D A4R28_12345 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D A4R28_12325 sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D A4R28_12330 sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein D A4R28_12335 cysW; sulfate/thiosulfate transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein D A4R28_12340 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D A4R28_10685 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D A4R28_10680 molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein D A4R28_10675 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D A4R28_14410 nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein D A4R28_14405 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D A4R28_24180 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D A4R28_24170 taurine ABC transporter permease K15552 tauC; taurine transport system permease protein D A4R28_24175 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D A4R28_03610 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D A4R28_13290 bicyclomycin resistance protein K15553 ssuA; sulfonate transport system substrate-binding protein D A4R28_24160 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D A4R28_03620 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D A4R28_13300 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D A4R28_24150 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D A4R28_03615 mannosyltransferase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D A4R28_13295 ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D A4R28_24145 aliphatic sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D A4R28_18865 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D A4R28_19355 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D A4R28_18870 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D A4R28_19350 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D A4R28_18875 sugar ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D A4R28_19345 spermidine/putrescine ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D A4R28_20105 tbpA; thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein D A4R28_20100 thiamine ABC transporter permease K02063 thiP; thiamine transport system permease protein D A4R28_20095 thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D A4R28_01540 spermidine/putrescine ABC transporter K11069 potD; spermidine/putrescine transport system substrate-binding protein D A4R28_08700 ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D A4R28_08735 putrescine/spermidine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D A4R28_12700 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D A4R28_16785 putrescine/spermidine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D A4R28_22985 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D A4R28_23050 potassium transporter Trk K11069 potD; spermidine/putrescine transport system substrate-binding protein D A4R28_00980 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D A4R28_01535 spermidine/putrescine ABC transporter K11070 potC; spermidine/putrescine transport system permease protein D A4R28_08710 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D A4R28_12690 peptide ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D A4R28_16790 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D A4R28_22995 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D A4R28_23040 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D A4R28_00985 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D A4R28_01530 spermidine/putrescine ABC transporter K11071 potB; spermidine/putrescine transport system permease protein D A4R28_08705 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D A4R28_12695 peptide ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D A4R28_16795 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D A4R28_22990 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D A4R28_23045 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D A4R28_00990 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D A4R28_01550 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D A4R28_08715 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D A4R28_12685 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D A4R28_16800 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D A4R28_23000 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D A4R28_23055 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D A4R28_29290 spermidine/putrescine ABC transporter substrate-binding protein PotF K11073 potF; putrescine transport system substrate-binding protein D A4R28_03220 spermidine/putrescine ABC transporter substrate-binding protein PotF K11073 potF; putrescine transport system substrate-binding protein D A4R28_29305 spermidine/putrescine ABC transporter permease K11074 potI; putrescine transport system permease protein D A4R28_29300 putrescine/spermidine ABC transporter permease K11075 potH; putrescine transport system permease protein D A4R28_29295 ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D A4R28_27625 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D A4R28_00995 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D A4R28_02650 polyamine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D A4R28_14355 ABC transporter K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D A4R28_14920 hypothetical protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D A4R28_17455 iron ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D A4R28_21465 ABC transporter K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D A4R28_25150 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D A4R28_27640 spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D A4R28_30580 hypothetical protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D A4R28_02660 polyamine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D A4R28_14365 polyamine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D A4R28_14930 hypothetical protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D A4R28_17445 spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D A4R28_21455 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D A4R28_27635 spermidine/putrescine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D A4R28_02655 polyamine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D A4R28_14360 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D A4R28_14925 hypothetical protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D A4R28_17450 acriflavin resistance protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D A4R28_27630 polyamine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D A4R28_02645 spermidine/putrescine ABC transporter K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D A4R28_14370 spermidine/putrescine ABC transporter K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D A4R28_14905 spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D A4R28_17440 spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D A4R28_21460 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D A4R28_25145 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D A4R28_00675 2-aminoethylphosphonate ABC transporter substrate-binding protein K11081 phnS; 2-aminoethylphosphonate transport system substrate-binding protein D A4R28_00690 phosphonate ABC transporter permease K11082 phnV; 2-aminoethylphosphonate transport system permease protein D A4R28_00685 2-aminoethylphosphonate ABC transporter permease K11083 phnU; 2-aminoethylphosphonate transport system permease protein D A4R28_00680 2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT K11084 phnT; 2-aminoethylphosphonate transport system ATP-binding protein D A4R28_27975 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D A4R28_01410 ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein D A4R28_03860 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D A4R28_16090 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D A4R28_27980 ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D A4R28_01400 ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D A4R28_16085 choline ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein D A4R28_27985 proline/glycine betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D A4R28_01405 ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D A4R28_16080 choline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D A4R28_04705 ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein D A4R28_04710 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D A4R28_04720 ABC transporter K05846 opuBD; osmoprotectant transport system permease protein D A4R28_04715 amino acid ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D A4R28_05605 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D A4R28_09965 ABC transporter permease K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D A4R28_10135 nitrate ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D A4R28_12120 nitrate ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D A4R28_12630 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D A4R28_12735 myristoyl transferase K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D A4R28_14275 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D A4R28_16555 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D A4R28_14490 taurine ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D A4R28_23915 nitrate ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D A4R28_05600 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D A4R28_09960 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D A4R28_10125 ABC transporter ATP-binding protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein D A4R28_12125 nitrate ABC transporter K02050 ABC.SN.P; NitT/TauT family transport system permease protein D A4R28_12130 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D A4R28_12635 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D A4R28_12745 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D A4R28_14270 nitrate transport permease nrtB K02050 ABC.SN.P; NitT/TauT family transport system permease protein D A4R28_16560 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D A4R28_14485 nitrate transport permease nrtB K02050 ABC.SN.P; NitT/TauT family transport system permease protein D A4R28_23920 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D A4R28_05595 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D A4R28_09955 sulfonate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D A4R28_10130 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D A4R28_12140 sulfonate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D A4R28_12640 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D A4R28_12740 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D A4R28_14265 sulfonate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D A4R28_14480 sulfonate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D A4R28_16565 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D A4R28_23925 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D A4R28_25640 sugar ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_24885 sugar ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_27325 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_27330 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_29410 glycerol-3-phosphate ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_31055 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_31865 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_00715 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_01105 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_05005 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_06310 glycerol-3-phosphate ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_06910 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_12600 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_12605 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_17055 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_17395 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_18175 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_18395 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_18400 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_22820 ABC transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_24860 sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D A4R28_31845 ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D A4R28_24865 ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D A4R28_31850 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D A4R28_24870 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D A4R28_26415 alpha-glucoside ABC transporter substrate-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein D A4R28_26410 alpha-glucoside ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein D A4R28_26405 alpha-glucoside ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein D A4R28_26395 ABC transporter ATP-binding protein K10235 aglK; alpha-glucoside transport system ATP-binding protein D A4R28_17380 sugar ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D A4R28_18190 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D A4R28_17385 ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein D A4R28_18185 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein D A4R28_17390 sugar ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D A4R28_18180 sugar ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D A4R28_15350 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D A4R28_15345 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein D A4R28_15340 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein D A4R28_26840 sugar ABC transporter substrate-binding protein K10537 araF; L-arabinose transport system substrate-binding protein D A4R28_26850 araH; L-arabinose ABC transporter permease AraH K10538 araH; L-arabinose transport system permease protein D A4R28_26845 araG; L-arabinose transporter ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D A4R28_28940 ABC transporter substrate-binding protein K10188 lacE; lactose/L-arabinose transport system substrate-binding protein D A4R28_28945 lactose ABC transporter permease K10189 lacF; lactose/L-arabinose transport system permease protein D A4R28_28950 ABC transporter permease K10190 lacG; lactose/L-arabinose transport system permease protein D A4R28_28955 sugar ABC transporter ATP-binding protein K10191 lacK; lactose/L-arabinose transport system ATP-binding protein D A4R28_28975 alpha-galactoside-binding protein K25096 agpA; alpha-galactoside transport system substrate-binding protein D A4R28_28980 ABC transporter permease K25097 agpB; alpha-galactoside transport system permease protein D A4R28_28985 ABC transporter permease K25098 agpC; alpha-galactoside transport system permease protein D A4R28_28990 microcin ABC transporter ATP-binding protein K25099 agpD; alpha-galactoside transport system ATP-binding protein D A4R28_13120 ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D A4R28_19575 D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D A4R28_13110 ABC transporter permease K10544 xylH; D-xylose transport system permease protein D A4R28_19570 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein D A4R28_13115 sugar ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D A4R28_19565 ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D A4R28_28705 sugar ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein D A4R28_28695 ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein D A4R28_28700 ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_02345 sugar ABC transporter K10552 frcB; fructose transport system substrate-binding protein D A4R28_02350 ABC transporter permease K10553 frcC; fructose transport system permease protein D A4R28_02355 sugar ABC transporter ATP-binding protein K10554 frcA; fructose transport system ATP-binding protein D A4R28_28875 rhamnose ABC transporter substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein D A4R28_28865 branched-chain amino acid ABC transporter permease K10560 rhaP; rhamnose transport system permease protein D A4R28_28860 branched-chain amino acid ABC transporter permease K10561 rhaQ; rhamnose transport system permease protein D A4R28_28870 D-xylose ABC transporter ATP-binding protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D A4R28_25810 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_26910 ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_30905 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_31760 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D A4R28_00165 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_00205 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_05045 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_12395 ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_12440 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_12525 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_14335 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_18240 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_18530 transporter K10439 rbsB; ribose transport system substrate-binding protein D A4R28_19245 ABC transporter K10439 rbsB; ribose transport system substrate-binding protein D A4R28_19875 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_23085 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_25445 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_00590 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_00765 ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_14170 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D A4R28_14535 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D A4R28_30875 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein D A4R28_25820 sugar ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_26900 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_26905 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_30840 hypothetical protein K10440 rbsC; ribose transport system permease protein D A4R28_30885 hypothetical protein K10440 rbsC; ribose transport system permease protein D A4R28_30895 sugar ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_30900 hypothetical protein K10440 rbsC; ribose transport system permease protein D A4R28_31765 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_31775 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_00170 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_00200 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_00750 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_05040 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_12380 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_12385 sugar ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_12450 sugar ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_12520 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_12530 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_14320 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_14325 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_18250 ABC transporter K10440 rbsC; ribose transport system permease protein D A4R28_18520 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_19250 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_19885 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_23070 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_23075 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_00160 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_00600 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_00745 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_14175 ABC transporter permease K10440 rbsC; ribose transport system permease protein D A4R28_14550 hypothetical protein K10440 rbsC; ribose transport system permease protein D A4R28_25815 D-xylose ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_26895 D-xylose ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_30880 hypothetical protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_30890 ABC transporter K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_31770 ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_00195 ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_00595 ABC transporter K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_05050 sugar ABC transporter K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_12390 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_14330 ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_18245 ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_18525 D-xylose ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_19255 D-xylose ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_19880 ABC transporter K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_23080 ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_25435 D-xylose ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_00755 ABC transporter K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_00760 ABC transporter K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_14180 ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_30845 hypothetical protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D A4R28_00495 D-ribose ABC transporter substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein D A4R28_00575 D-ribose ABC transporter substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein D A4R28_00490 sugar ABC transporter permease K17203 eryF; erythritol transport system permease protein D A4R28_00560 sugar ABC transporter permease K17203 eryF; erythritol transport system permease protein D A4R28_00485 sugar ABC transporter ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein D A4R28_00565 sugar ABC transporter ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein D A4R28_29365 sugar ABC transporter substrate-binding protein K17205 xltC; putative xylitol transport system substrate-binding protein D A4R28_29370 sugar ABC transporter permease K17206 xltB; putative xylitol transport system permease protein D A4R28_29375 D-xylose ABC transporter ATP-binding protein K17207 xltA; putative xylitol transport system ATP-binding protein D A4R28_13830 LacI family transcriptional regulator K17208 ibpA; inositol transport system substrate-binding protein D A4R28_13820 sugar ABC transporter permease K17209 iatP; inositol transport system permease protein D A4R28_13825 D-xylose ABC transporter ATP-binding protein K17210 iatA; inositol transport system ATP-binding protein D A4R28_25910 rhizopine-binding protein K17213 K17213; inositol transport system substrate-binding protein D A4R28_25905 ABC transporter K17214 K17214; inositol transport system permease protein D A4R28_25900 ABC transporter ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein D A4R28_06885 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein D A4R28_06870 ABC transporter permease K17322 glpP; glycerol transport system permease protein D A4R28_06875 sugar ABC transporter permease K17323 glpQ; glycerol transport system permease protein D A4R28_06860 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein D A4R28_06865 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein D A4R28_18895 sn-glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D A4R28_18890 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D A4R28_18885 glycerol-3-phosphate transporter K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D A4R28_18880 glycerol-3-phosphate ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D A4R28_25655 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D A4R28_25650 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein D A4R28_25645 sugar ABC transporter permease K10229 smoG; polyol transport system permease protein D A4R28_07605 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D A4R28_16405 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D A4R28_16440 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D A4R28_16545 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D A4R28_17700 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D A4R28_22940 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D A4R28_13250 hypothetical protein K07335 bmpA; basic membrane protein A and related proteins D A4R28_29540 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins D A4R28_07595 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D A4R28_13260 hypothetical protein K23535 nupB; general nucleoside transport system permease protein D A4R28_16415 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D A4R28_16430 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D A4R28_16535 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D A4R28_17725 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D A4R28_22930 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D A4R28_29530 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D A4R28_07600 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D A4R28_13265 hypothetical protein K23536 nupC; general nucleoside transport system permease protein D A4R28_16420 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D A4R28_16425 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D A4R28_16530 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D A4R28_17730 sugar ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D A4R28_22925 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D A4R28_29525 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D A4R28_29535 heme ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D A4R28_07590 ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein D A4R28_13255 hypothetical protein K23537 nupA; general nucleoside transport system ATP-binding protein D A4R28_16410 ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein D A4R28_16435 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D A4R28_16540 sugar ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein D A4R28_17720 heme ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein D A4R28_22935 sugar ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein D A4R28_06510 organic solvent ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D A4R28_06500 organic solvent ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D A4R28_06505 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D A4R28_06515 ABC transporter K18480 linN; cholesterol transport system auxiliary component D A4R28_27350 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D A4R28_00730 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D A4R28_00770 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D A4R28_01110 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D A4R28_05000 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D A4R28_06295 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D A4R28_06925 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D A4R28_14080 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D A4R28_17060 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D A4R28_18420 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D A4R28_22810 bicyclomycin resistance protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D A4R28_12620 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D A4R28_14505 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D A4R28_29420 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D A4R28_31040 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D A4R28_27345 ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D A4R28_29425 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D A4R28_00725 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D A4R28_01115 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D A4R28_04995 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D A4R28_06300 ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D A4R28_06920 ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D A4R28_12610 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D A4R28_14085 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D A4R28_17065 ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D A4R28_18415 ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D A4R28_22800 ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D A4R28_14500 ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D A4R28_31045 hypothetical protein K02025 ABC.MS.P; multiple sugar transport system permease protein D A4R28_27340 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D A4R28_29415 ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D A4R28_31050 hypothetical protein K02026 ABC.MS.P1; multiple sugar transport system permease protein D A4R28_00720 maltose ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D A4R28_01120 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D A4R28_04990 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D A4R28_06305 ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D A4R28_06915 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D A4R28_12615 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D A4R28_14090 ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D A4R28_17070 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D A4R28_18410 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D A4R28_22795 hypothetical protein K02026 ABC.MS.P1; multiple sugar transport system permease protein D A4R28_14495 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D A4R28_31725 hypothetical protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D A4R28_01250 LacI family transcriptional regulator K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D A4R28_01510 sugar ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D A4R28_10840 sugar ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D A4R28_12585 ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D A4R28_01245 sugar ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D A4R28_01505 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D A4R28_12580 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D A4R28_25440 sugar ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D A4R28_31730 hypothetical protein K02057 ABC.SS.P; simple sugar transport system permease protein D A4R28_31735 ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_01240 sugar ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_01500 sugar ABC transporter K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_10835 ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_12445 ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_12575 sugar ABC transporter K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D A4R28_19610 phosphonate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D A4R28_19605 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D A4R28_19600 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D A4R28_19595 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D A4R28_28410 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D A4R28_18315 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D A4R28_18320 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D A4R28_18325 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D A4R28_18310 phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D A4R28_05445 polar amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D A4R28_14650 amino acid ABC transporter substrate-binding protein K10018 occT; octopine/nopaline transport system substrate-binding protein D A4R28_14660 ABC transporter permease K10019 occM; octopine/nopaline transport system permease protein D A4R28_14655 ABC transporter permease K10020 occQ; octopine/nopaline transport system permease protein D A4R28_14645 amino acid transporter K10021 occP; octopine/nopaline transport system ATP-binding protein [EC:7.4.2.1] D A4R28_03780 amino acid ABC transporter substrate-bindnig protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D A4R28_14715 ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D A4R28_03785 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D A4R28_14720 ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D A4R28_03790 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D A4R28_14725 ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D A4R28_03795 ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D A4R28_14730 glnQ; glutamine ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D A4R28_20080 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D A4R28_20075 cysteine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D A4R28_20070 ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D A4R28_25595 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_26945 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_00375 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_00415 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_00975 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_02815 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_05355 amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_20475 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_25085 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_25510 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_00065 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_14840 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_29105 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_29635 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_31820 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D A4R28_25585 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_26665 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_26935 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_29645 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_31815 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_00075 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_00390 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_00430 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_00935 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_14845 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_20500 branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D A4R28_25100 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_25505 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_29090 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D A4R28_25590 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_26940 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_00395 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_00930 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_14850 hypothetical protein K01998 livM; branched-chain amino acid transport system permease protein D A4R28_20495 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_25105 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_25500 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_00070 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_00435 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_29085 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_29630 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_31810 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D A4R28_25575 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_26930 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_29100 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_31805 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_00085 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_00380 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_00420 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_00945 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_14855 hypothetical protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_20490 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_25090 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_25495 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D A4R28_25580 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_26950 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_29095 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_29640 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_31800 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_00080 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_00385 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_00425 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_00940 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_14860 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_20485 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_25095 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_25490 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_29340 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D A4R28_24950 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D A4R28_24940 ABC transporter permease K02072 metI; D-methionine transport system permease protein D A4R28_24945 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D A4R28_06680 urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D A4R28_00865 ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D A4R28_00885 branched-chain amino acid ABC transporter permease K11960 urtB; urea transport system permease protein D A4R28_06685 urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein D A4R28_00880 ABC transporter permease K11961 urtC; urea transport system permease protein D A4R28_06690 urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D A4R28_00875 ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein D A4R28_06695 ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein D A4R28_00870 ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D A4R28_06700 ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D A4R28_26775 amino acid ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A4R28_27825 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A4R28_28605 amino acid ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A4R28_28685 amino acid ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A4R28_29690 ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A4R28_29885 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A4R28_30620 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A4R28_31915 glnQ; glutamine ABC transporter ATP-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A4R28_31925 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A4R28_07410 amino acid ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A4R28_13915 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A4R28_21500 glnQ; glutamine ABC transporter ATP-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A4R28_21510 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A4R28_23385 amino acid ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A4R28_24925 amino acid ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A4R28_25535 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A4R28_05460 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A4R28_13540 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A4R28_21715 ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D A4R28_05450 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D A4R28_26765 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D A4R28_26770 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D A4R28_27820 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D A4R28_29695 ectoine/hydroxyectoine ABC transporter permease subunit EhuC K02029 ABC.PA.P; polar amino acid transport system permease protein D A4R28_29700 ectoine/hydroxyectoine ABC transporter permease subunit EhuD K02029 ABC.PA.P; polar amino acid transport system permease protein D A4R28_29890 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D A4R28_30610 hypothetical protein K02029 ABC.PA.P; polar amino acid transport system permease protein D A4R28_31920 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D A4R28_05455 nickel transporter K02029 ABC.PA.P; polar amino acid transport system permease protein D A4R28_07400 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D A4R28_07405 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D A4R28_13920 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D A4R28_13925 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D A4R28_21505 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D A4R28_21705 ectoine/hydroxyectoine ABC transporter permease subunit EhuD K02029 ABC.PA.P; polar amino acid transport system permease protein D A4R28_21710 ectoine/hydroxyectoine ABC transporter permease subunit EhuC K02029 ABC.PA.P; polar amino acid transport system permease protein D A4R28_23380 amino acid ABC transporter K02029 ABC.PA.P; polar amino acid transport system permease protein D A4R28_25540 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D A4R28_25545 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D A4R28_26780 amino acid transporter K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D A4R28_29685 ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D A4R28_29895 ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D A4R28_30605 ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D A4R28_13930 polar amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D A4R28_21700 ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D A4R28_02405 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D A4R28_02410 ABC transporter K15581 oppB; oligopeptide transport system permease protein D A4R28_02415 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D A4R28_02420 microcin ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D A4R28_27780 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D A4R28_27895 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D A4R28_27785 peptide ABC transporter permease K12369 dppB; dipeptide transport system permease protein D A4R28_27890 ABC transporter permease K12369 dppB; dipeptide transport system permease protein D A4R28_27790 peptide transporter K12370 dppC; dipeptide transport system permease protein D A4R28_27885 ABC transporter permease K12370 dppC; dipeptide transport system permease protein D A4R28_27795 dppD; peptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D A4R28_27880 ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D A4R28_31990 ABC transporter K12371 dppD; dipeptide transport system ATP-binding protein D A4R28_27800 peptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D A4R28_27875 dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D A4R28_26460 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_26480 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_27080 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_28130 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_30715 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_31380 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_00835 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_01425 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_01450 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_02100 diguanylate cyclase K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_04250 diguanylate cyclase K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_07290 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_07545 bicyclomycin resistance protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_09665 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_12295 diguanylate cyclase K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_14230 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_18450 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_21685 ABC transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_24230 diguanylate cyclase K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_25070 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D A4R28_26475 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_27035 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_28135 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_30710 hypothetical protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_31385 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_32000 glutathione ABC transporter permease GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_00830 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_01445 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_07300 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_09670 peptide ABC transporter K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_12290 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_14225 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_18455 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_21680 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_25065 glutathione ABC transporter permease GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D A4R28_26470 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_27040 D-ala-D-ala transporter subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_28140 D-ala-D-ala transporter subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_30705 hypothetical protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_31390 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_31995 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_00825 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_01440 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_07295 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_09675 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_12285 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_14220 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_18460 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_21675 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_25060 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D A4R28_26465 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_27045 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_28145 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_30690 glutathione ABC transporter ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_31395 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_00820 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_01435 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_07305 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_09680 microcin ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_12280 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_14245 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_18465 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_21670 dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_25080 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D A4R28_27050 dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D A4R28_28150 ABC transporter K02032 ddpF; peptide/nickel transport system ATP-binding protein D A4R28_31985 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D A4R28_00815 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D A4R28_07310 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D A4R28_18470 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D A4R28_28055 hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein D A4R28_28060 hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein D A4R28_28050 microcin ABC transporter permease K13894 yejB; microcin C transport system permease protein D A4R28_28045 peptide ABC transporter permease K13895 yejE; microcin C transport system permease protein D A4R28_28040 microcin ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D A4R28_28905 ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D A4R28_22895 ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D A4R28_28910 Fe3+-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein D A4R28_22900 Fe3+-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein D A4R28_22885 iron-hydroxamate transporter ATP-binding subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D A4R28_09530 hemin ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein D A4R28_12660 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein D A4R28_09525 iron ABC transporter K25133 hmuU; heme transport system permease protein D A4R28_09520 iron ABC transporter K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D A4R28_04000 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D A4R28_04005 ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D A4R28_03995 iron ABC transporter K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D A4R28_01715 biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component D A4R28_02170 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D A4R28_12750 HMP/thiamine-binding protein K24620 ykoF; energy-coupling factor transport system substrate-specific component D A4R28_04365 metal ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D A4R28_04370 zinc ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D A4R28_04375 ABC transporter K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D A4R28_02260 hypothetical protein K09690 wzm; homopolymeric O-antigen transport system permease protein D A4R28_02255 hypothetical protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D A4R28_03370 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D A4R28_03365 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D A4R28_17955 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D A4R28_22160 nodulation protein NodJ K09694 nodJ; lipooligosaccharide transport system permease protein D A4R28_22165 nodulation factor ABC transporter ATP-binding protein NodI K09695 nodI; lipooligosaccharide transport system ATP-binding protein D A4R28_10230 multidrug ABC transporter substrate-binding protein K09808 lolC_E; lipoprotein-releasing system permease protein D A4R28_10225 ABC transporter K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D A4R28_23540 transcriptional regulator K02196 ccmD; heme exporter protein D D A4R28_04430 heme transporter HemC K02195 ccmC; heme exporter protein C D A4R28_23545 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D A4R28_23550 heme ABC transporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D A4R28_18970 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D A4R28_18965 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D A4R28_05685 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D A4R28_24315 sugar ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D A4R28_24445 mannose-1-phosphate guanyltransferase K01992 ABC-2.P; ABC-2 type transport system permease protein D A4R28_05690 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A4R28_24310 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A4R28_24440 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A4R28_10440 multidrug ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein D A4R28_23585 glycosyl transferase family 1 K02004 ABC.CD.P; putative ABC transport system permease protein D A4R28_10435 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D A4R28_23590 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D A4R28_05125 sufC; ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D A4R28_25615 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D A4R28_28780 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D A4R28_10880 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D A4R28_17420 sugar transporter K08178 JEN; MFS transporter, SHS family, lactate transporter D A4R28_09855 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D A4R28_06490 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D A4R28_09485 chloramphenicol efflux MFS transporter K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein D A4R28_15220 tetracycline resistance MFS efflux pump K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D A4R28_05235 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D A4R28_10720 Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D A4R28_04585 MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D A4R28_06585 ABC transporter permease K03445 nepI; MFS transporter, DHA1 family, purine ribonucleoside efflux pump D A4R28_16160 arabinose transporter permease K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D A4R28_03975 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D A4R28_15115 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D A4R28_31695 hypothetical protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D A4R28_04050 EmrB/QacA family drug resistance transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D A4R28_07755 EmrB/QacA family drug resistance transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D A4R28_25215 EmrB/QacA family drug resistance transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D A4R28_25255 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D A4R28_15865 Fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D A4R28_22665 MFS transporter K06902 UMF1; MFS transporter, UMF1 family D A4R28_27300 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D A4R28_19295 PTS sugar transporter subunit IIBC K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D A4R28_18650 peptidase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D A4R28_27305 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D A4R28_26050 serine kinase K02784 ptsH; phosphocarrier protein HPr D A4R28_19300 PTS cellobiose transporter subunit IIB K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D A4R28_19305 PTS sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D A4R28_19310 PTS beta-glucoside transporter subunit IIABC K02783 srlA; glucitol/sorbitol PTS system EIIC component D A4R28_29140 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D A4R28_29135 PTS galactitol transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D A4R28_29145 DNA mismatch repair protein MutT K02775 gatC; galactitol PTS system EIIC component D A4R28_26045 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D A4R28_17940 transcriptional regulator K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D A4R28_27310 PTS mannose transporter subunit IID K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D A4R28_29900 aquaporin K06188 aqpZ; aquaporin Z D A4R28_06225 ion transporter K10716 kch; voltage-gated potassium channel D A4R28_23265 ammonia channel protein K03320 amt; ammonium transporter, Amt family D A4R28_31595 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_03120 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_03480 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_03895 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_05180 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_07960 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_10480 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_15410 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_16380 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_16575 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_19645 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_19790 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_24530 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_24610 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_25800 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A4R28_29205 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D A4R28_09805 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D A4R28_28820 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D A4R28_10045 mechanosensitive ion channel protein K05802 mscK; potassium-dependent mechanosensitive channel D A4R28_20600 mechanosensitive ion channel protein K03442 mscS; small conductance mechanosensitive channel D A4R28_07525 magnesium transporter K06213 mgtE; magnesium transporter D A4R28_10205 magnesium transporter K06213 mgtE; magnesium transporter D A4R28_16855 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D A4R28_16950 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D A4R28_20335 hypothetical protein K02557 motB; chemotaxis protein MotB D A4R28_22880 biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB D A4R28_22875 TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD D A4R28_20225 Tol-Pal system subunit TolQ K03562 tolQ; biopolymer transport protein TolQ D A4R28_20220 protein TolR K03560 tolR; biopolymer transport protein TolR D A4R28_28305 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D A4R28_28640 magnesium transporter K03284 corA; magnesium transporter D A4R28_15910 magnesium transporter K03284 corA; magnesium transporter D A4R28_03125 magnesium transporter CorA K16074 zntB; zinc transporter D A4R28_08310 camphor resistance protein CrcB K06199 crcB; fluoride exporter D A4R28_13200 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein D A4R28_23715 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein D A4R28_10895 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein D A4R28_18615 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein D A4R28_25160 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein D A4R28_15555 DNA-binding protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D A4R28_28765 hypothetical protein K16079 omp31; outer membrane immunogenic protein D A4R28_03485 hypothetical protein K16079 omp31; outer membrane immunogenic protein D A4R28_08205 hypothetical protein K16079 omp31; outer membrane immunogenic protein D A4R28_09000 porin K16079 omp31; outer membrane immunogenic protein D A4R28_04790 hypothetical protein K16079 omp31; outer membrane immunogenic protein D A4R28_08655 hypothetical protein K16079 omp31; outer membrane immunogenic protein D A4R28_13270 porin K16079 omp31; outer membrane immunogenic protein D A4R28_09180 long-chain fatty acid transporter K06076 fadL; long-chain fatty acid transport protein D A4R28_09545 ligand-gated channel K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D A4R28_12665 TonB-dependent heme/hemoglobin receptor family protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D A4R28_22670 ligand-gated channel protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A4R28_22890 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A4R28_09195 transporter K12340 tolC; outer membrane protein D A4R28_16660 channel protein TolC K12543 lapE; outer membrane protein, adhesin transport system D A4R28_13315 RND transporter K18904 nodT; outer membrane protein, multidrug efflux system D A4R28_27130 sugar ABC transporter substrate-binding protein K16552 exoF; polysaccharide biosynthesis/export protein ExoF D A4R28_33145 sugar ABC transporter substrate-binding protein K01991 wza; polysaccharide biosynthesis/export protein D A4R28_00255 sugar ABC transporter substrate-binding protein K01991 wza; polysaccharide biosynthesis/export protein D A4R28_04810 sugar ABC transporter substrate-binding protein K01991 wza; polysaccharide biosynthesis/export protein D A4R28_07150 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D A4R28_10980 hypothetical protein K05807 bamD; outer membrane protein assembly factor BamD D A4R28_12305 hypothetical protein K07278 tamA; translocation and assembly module TamA D A4R28_12300 hypothetical protein K09800 tamB; translocation and assembly module TamB D A4R28_16685 calcium-binding protein K21449 ata; trimeric autotransporter adhesin D A4R28_17960 cell division protein DivIVA K09774 lptA; lipopolysaccharide export system protein LptA D A4R28_17965 LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D A4R28_03360 Organic solvent tolerance protein K04744 lptD; LPS-assembly protein D A4R28_22570 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D A4R28_28245 magnesium/cobalt efflux protein K06189 corC; hemolysin (HlyC) family protein D A4R28_01350 transporter K16238 eat; ethanolamine permease D A4R28_17135 zinc transporter ZitB K16264 czcD; cobalt-zinc-cadmium efflux system protein D A4R28_13320 aminoglycoside/multidrug transporter subunit AcrD K18138 acrB; multidrug efflux pump D A4R28_19420 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D A4R28_28160 ACR family transporter K21134 triC; multidrug efflux pump D A4R28_19970 acriflavin resistance protein K18989 vexF; multidrug efflux pump D A4R28_25405 molecular chaperone K11741 sugE; quaternary ammonium compound-resistance protein SugE D A4R28_24585 transporter K08978 TC.BAT1; bacterial/archaeal transporter family protein D A4R28_10790 hypothetical protein K11939 rhtA; inner membrane transporter RhtA D A4R28_13280 transporter K11939 rhtA; inner membrane transporter RhtA D A4R28_03115 permease K05786 rarD; chloramphenicol-sensitive protein RarD D A4R28_06795 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D A4R28_03275 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein D A4R28_29855 ionic transporter K07300 chaA; Ca2+:H+ antiporter D A4R28_01155 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D A4R28_22150 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D A4R28_27380 nhaA; sodium:proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family D A4R28_04645 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D A4R28_17435 sodium:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D A4R28_19715 K+/H+ antiporter K11105 cvrA; potassium/hydrogen antiporter D A4R28_06575 potassium transporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D A4R28_18095 sodium:proton antiporter K26735 KEA4_5_6; K+:H+ antiporter D A4R28_26145 benzoate transporter K05782 benE; benzoate membrane transport protein D A4R28_17015 chloride channel protein K03281 clcA; chloride channel protein, CIC family D A4R28_10745 chloride channel protein K03281 clcA; chloride channel protein, CIC family D A4R28_23625 chloride channel protein K03281 clcA; chloride channel protein, CIC family D A4R28_27735 chromate transporter K07240 chrA; chromate transporter D A4R28_24370 SulP family sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D A4R28_15240 divalent metal cation transporter K03322 mntH; manganese transport protein D A4R28_00645 Na+ cotransporter K03324 yjbB; phosphate:Na+ symporter D A4R28_15110 Na+ cotransporter K03324 yjbB; phosphate:Na+ symporter D A4R28_13955 arsenical-resistance protein K03325 ACR3; arsenite transporter D A4R28_27440 lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D A4R28_07560 malonate transporter K13936 mdcF; malonate transporter and related proteins D A4R28_09600 transporter K13936 mdcF; malonate transporter and related proteins D A4R28_10500 trkD; potassium transport protein Kup K03549 kup; KUP system potassium uptake protein D A4R28_21280 trkD; potassium transport protein Kup K03549 kup; KUP system potassium uptake protein D A4R28_26300 lysine transporter LysE K05834 rhtB; homoserine/homoserine lactone efflux protein D A4R28_15040 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D A4R28_10955 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D A4R28_15035 hypothetical protein K26606 azlD; branched chain amino acid efflux pump D A4R28_10950 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump D A4R28_17820 tripartite tricarboxylate transporter TctA K07793 tctA; putative tricarboxylic transport membrane protein D A4R28_17860 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D A4R28_17855 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D A4R28_17825 tricarboxylic transporter K07794 tctB; putative tricarboxylic transport membrane protein D A4R28_17830 C4-dicarboxylate ABC transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein D A4R28_17850 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D A4R28_19105 hypothetical protein K09125 yhhQ; queuosine precursor transporter D A4R28_24465 rubrerythrin family protein K22737 mbfA; erythrin-vacuolar iron transport family protein D A4R28_06760 MarC family transcriptional regulator K05595 marC; multiple antibiotic resistance protein D A4R28_11025 cell division protein FtsW K03588 ftsW; cell division protein FtsW D A4R28_17120 delayed-early response protein/equilibrative nucleoside transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein D A4R28_22870 energy transducer TonB K03832 tonB; periplasmic protein TonB D A4R28_09555 energy transducer TonB K03832 tonB; periplasmic protein TonB D A4R28_20200 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D A4R28_20215 hypothetical protein K03646 tolA; colicin import membrane protein D A4R28_20210 tolB; translocation protein TolB K03641 tolB; TolB protein D A4R28_04725 hppA; sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D A4R28_06360 cytochrome C biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein D A4R28_31700 multidrug transporter K03543 emrA; membrane fusion protein, multidrug efflux system D A4R28_04045 hypothetical protein K03543 emrA; membrane fusion protein, multidrug efflux system D A4R28_25220 hemolysin secretion protein D K03543 emrA; membrane fusion protein, multidrug efflux system D A4R28_25250 hemolysin D K03543 emrA; membrane fusion protein, multidrug efflux system D A4R28_07750 secretion protein HylD K03543 emrA; membrane fusion protein, multidrug efflux system D A4R28_32760 hemolysin secretion protein D K12537 hasE; membrane fusion protein, type I secretion system D A4R28_00345 hemolysin D K12537 hasE; membrane fusion protein, type I secretion system D A4R28_10000 hemolysin secretion protein D K12537 hasE; membrane fusion protein, type I secretion system D A4R28_16505 hemolysin secretion protein D K12537 hasE; membrane fusion protein, type I secretion system D A4R28_00015 secretion protein HylD K12537 hasE; membrane fusion protein, type I secretion system D A4R28_33200 secretion protein K11003 hlyD; membrane fusion protein, hemolysin D D A4R28_16650 secretion protein HylD K12542 lapC; membrane fusion protein, adhesin transport system D A4R28_01475 efflux transporter periplasmic adaptor subunit K18901 bpeE; membrane fusion protein, multidrug efflux system D A4R28_01280 efflux transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D A4R28_13325 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A4R28_19415 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A4R28_28170 efflux transporter periplasmic adaptor subunit K21136 triA; membrane fusion protein, multidrug efflux system D A4R28_28165 efflux transporter periplasmic adaptor subunit K21137 triB; membrane fusion protein, multidrug efflux system D A4R28_19975 efflux transporter periplasmic adaptor subunit K18990 vexE; membrane fusion protein, multidrug efflux system D A4R28_10545 efflux transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D A4R28_27245 chain-length determining protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D A4R28_33160 hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D A4R28_00310 exopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D A4R28_13700 lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D A4R28_04815 chain-length determining protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D A4R28_01595 microcin B17 transporter K17938 sbmA; peptide/bleomycin uptake transporter D A4R28_02705 c-type cytochrome biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D A4R28_26510 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D A4R28_04100 MltA-interacting MipA family protein K07274 mipA; MipA family protein D A4R28_05900 MltA-interacting MipA family protein K07274 mipA; MipA family protein D A4R28_18205 copper resistance protein CopC K14166 ycnJ; copper transport protein C 02044 Secretion system [BR:mcic02044] D A4R28_33205 ABC transporter ATP-binding protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D A4R28_33200 secretion protein K11003 hlyD; membrane fusion protein, hemolysin D D A4R28_09195 transporter K12340 tolC; outer membrane protein D A4R28_32755 type I secretion protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D A4R28_00010 peptidase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D A4R28_00340 type I secretion protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D A4R28_09995 type I secretion protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D A4R28_16500 peptide ABC transporter K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D A4R28_32760 hemolysin secretion protein D K12537 hasE; membrane fusion protein, type I secretion system D A4R28_00345 hemolysin D K12537 hasE; membrane fusion protein, type I secretion system D A4R28_10000 hemolysin secretion protein D K12537 hasE; membrane fusion protein, type I secretion system D A4R28_16505 hemolysin secretion protein D K12537 hasE; membrane fusion protein, type I secretion system D A4R28_00015 secretion protein HylD K12537 hasE; membrane fusion protein, type I secretion system D A4R28_16655 Fe3+/spermidine/putrescine ABC transporter ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D A4R28_16650 secretion protein HylD K12542 lapC; membrane fusion protein, adhesin transport system D A4R28_16660 channel protein TolC K12543 lapE; outer membrane protein, adhesin transport system D A4R28_29235 hypothetical protein K02460 gspK; general secretion pathway protein K D A4R28_28435 peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D A4R28_29505 peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D A4R28_28440 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D A4R28_29475 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D A4R28_06105 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D A4R28_28445 pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC D A4R28_29470 pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC D A4R28_06110 secretin K02280 cpaC; pilus assembly protein CpaC D A4R28_21030 hypothetical protein K02280 cpaC; pilus assembly protein CpaC D A4R28_28450 pilus assembly protein K02281 cpaD; pilus assembly protein CpaD D A4R28_21025 hypothetical protein K02281 cpaD; pilus assembly protein CpaD D A4R28_28455 CtpF protein K02282 cpaE; pilus assembly protein CpaE D A4R28_29445 pilus assembly protein K02282 cpaE; pilus assembly protein CpaE D A4R28_06120 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE D A4R28_28460 protein kinase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D A4R28_29485 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D A4R28_06125 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D A4R28_28465 pilus assembly protein K12510 tadB; tight adherence protein B D A4R28_29490 type II secretion system protein F K12510 tadB; tight adherence protein B D A4R28_06130 type II secretion system protein F K12510 tadB; tight adherence protein B D A4R28_28470 type II secretion system protein K12511 tadC; tight adherence protein C D A4R28_29495 type II secretion protein F K12511 tadC; tight adherence protein C D A4R28_06135 type II secretion protein F K12511 tadC; tight adherence protein C D A4R28_02395 hypothetical protein K27080 tadG; tight adherence protein G D A4R28_28430 fimbrial protein K02651 flp; pilus assembly protein Flp/PilA D A4R28_29480 pilin K02651 flp; pilus assembly protein Flp/PilA D A4R28_18720 pilus assembly protein PilA K02651 flp; pilus assembly protein Flp/PilA D A4R28_19655 fimbrial protein K02651 flp; pilus assembly protein Flp/PilA D A4R28_22835 hypothetical protein K02221 yggT; YggT family protein D A4R28_21155 hypothetical protein K03220 yscD; type III secretion protein D D A4R28_21085 EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein K03222 yscJ; type III secretion protein J D A4R28_21095 nodulation protein NolV K03223 yscL; type III secretion protein L D A4R28_21100 fliI; EscN/YscN/HrcN family type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D A4R28_21110 translocation protein K03225 yscQ; type III secretion protein Q D A4R28_21115 ssaR; EscR/YscR/HrcR family type III secretion system export apparatus protein K03226 yscR; type III secretion protein R D A4R28_21120 EscS/YscS/HrcS family type III secretion system export apparatus protein K03227 yscS; type III secretion protein S D A4R28_21125 EscT/YscT/HrcT family type III secretion system export apparatus protein K03228 yscT; type III secretion protein T D A4R28_21130 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K03229 yscU; type III secretion protein U D A4R28_21160 EscV/YscV/HrcV family type III secretion system export apparatus protein K03230 yscV; type III secretion protein V D A4R28_21070 nodulation protein NOLX K18376 hrpF; type III secretion translocon protein HrpF D A4R28_17025 flhA; EscV/YscV/HrcV family type III secretion system export apparatus protein K02400 flhA; flagellar biosynthesis protein FlhA D A4R28_16835 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D A4R28_16940 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D A4R28_16870 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D A4R28_16845 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D A4R28_16925 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D A4R28_17005 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D A4R28_17030 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D A4R28_32100 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D A4R28_20790 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D A4R28_32090 P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D A4R28_20780 P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8] D A4R28_32085 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC D A4R28_20775 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC D A4R28_32080 conjugal transfer protein K20529 trbD; type IV secretion system protein TrbD D A4R28_20770 conjugal transfer protein K20529 trbD; type IV secretion system protein TrbD D A4R28_32075 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D A4R28_20765 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D A4R28_32055 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF D A4R28_20750 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF D A4R28_32050 P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D A4R28_20745 P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D A4R28_32045 conjugal transfer protein TraI K20533 trbI; type IV secretion system protein TrbI D A4R28_20740 conjugal transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI D A4R28_32070 conjugal transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D A4R28_20760 conjugal transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D A4R28_32060 conjugal transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D A4R28_20755 conjugal transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D A4R28_31160 type VI secretion protein VasK K11891 impL; type VI secretion system protein ImpL D A4R28_31220 type VI secretion protein K11891 impL; type VI secretion system protein ImpL D A4R28_31155 hypothetical protein K11892 impK; type VI secretion system protein ImpK D A4R28_31215 type IV / vi secretion system protein, dotu family K11892 impK; type VI secretion system protein ImpK D A4R28_31150 type VI secretion protein K11893 impJ; type VI secretion system protein ImpJ D A4R28_31135 type VI secretion protein K11895 impH; type VI secretion system protein ImpH D A4R28_31130 type VI secretion protein K11896 impG; type VI secretion system protein ImpG D A4R28_31125 type VI secretion protein K11897 impF; type VI secretion system protein ImpF D A4R28_31115 EvpB family type VI secretion protein K11900 impC; type VI secretion system protein ImpC D A4R28_31110 type VI secretion protein K11901 impB; type VI secretion system protein ImpB D A4R28_31105 type VI secretion protein K11902 impA; type VI secretion system protein ImpA D A4R28_31120 type VI secretion protein K11903 hcp; type VI secretion system secreted protein Hcp D A4R28_31205 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG D A4R28_31145 type VI secretion lipoprotein K11906 vasD; type VI secretion system protein VasD D A4R28_31100 ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG D A4R28_31165 type VI secretion protein K11890 impM; type VI secretion system protein ImpM D A4R28_31140 type VI secretion protein K11894 impI; type VI secretion system protein ImpI D A4R28_31210 type VI secretion protein K11894 impI; type VI secretion system protein ImpI D A4R28_18755 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A4R28_24090 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D A4R28_09060 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein D A4R28_08550 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D A4R28_07250 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D A4R28_08360 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A4R28_23690 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D A4R28_23505 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D A4R28_09065 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D A4R28_25205 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A4R28_09115 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D A4R28_09110 twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D A4R28_09105 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:mcic02042] D A4R28_15555 DNA-binding protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D A4R28_20325 DNA-binding protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:mcic02022] D A4R28_28630 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D A4R28_19585 DNA-binding response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D A4R28_21900 two-component system response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D A4R28_22430 protein petR K07660 phoP; two-component system, OmpR family, response regulator PhoP D A4R28_15800 two-component sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D A4R28_15795 DNA-binding response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D A4R28_17640 two-component sensor histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D A4R28_17635 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D A4R28_03625 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D A4R28_03630 DNA-binding response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D A4R28_26035 histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D A4R28_26030 DNA-binding response regulator K14981 chvI; two-component system, OmpR family, response regulator ChvI D A4R28_16970 two-component system response regulator K21603 ftcR; two-component system, OmpR family, flagellar system response regulator FtcR D A4R28_21205 hypothetical protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D A4R28_02680 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D A4R28_02720 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D A4R28_05905 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D A4R28_16070 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D A4R28_21190 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator D A4R28_21200 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D A4R28_23785 two-component system response regulator CreB K02483 K02483; two-component system, OmpR family, response regulator D A4R28_23965 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D A4R28_13340 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D A4R28_24345 DNA-binding response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D A4R28_08070 two-component sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D A4R28_08065 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D A4R28_08060 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D A4R28_08055 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D A4R28_01160 two-component sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D A4R28_01165 Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D A4R28_16325 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D A4R28_32820 protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D A4R28_30110 chemotaxis protein CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D A4R28_30410 hybrid sensor histidine kinase/response regulator K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE D A4R28_30420 diguanylate cyclase response regulator K11444 wspR; two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65] D A4R28_30415 chemotaxis response regulator protein-glutamate methylesterase K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61] D A4R28_02745 PAS domain-containing sensor histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D A4R28_07360 two-component sensor histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] D A4R28_02590 PAS domain-containing sensor histidine kinase K11357 divJ; two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3] D A4R28_32250 pleD; diguanylate cyclase response regulator K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D A4R28_06270 pleD; diguanylate cyclase response regulator K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65] D A4R28_06265 two-component system response regulator K11443 divK; two-component system, cell cycle response regulator DivK D A4R28_06625 hybrid sensor histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D A4R28_16330 DNA-binding response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA D A4R28_17310 MFS transporter K13589 cpdR; two-component system, cell cycle response regulator CpdR D A4R28_30350 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D A4R28_30355 fixJ; DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ D A4R28_27370 two-component sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D A4R28_07995 histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D A4R28_27375 two-component system response regulator K15012 regA; two-component system, response regulator RegA D A4R28_07990 two-component system response regulator K15012 regA; two-component system, response regulator RegA D A4R28_14420 nitrate transporter K22067 nasS; two-component system, oxyanion-binding sensor D A4R28_14425 two-component system response regulator K07183 nasT; two-component system, response regulator / RNA-binding antiterminator C 02035 Bacterial motility proteins [BR:mcic02035] D A4R28_32820 protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D A4R28_30110 chemotaxis protein CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D A4R28_16325 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D A4R28_16870 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D A4R28_16925 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D A4R28_17005 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D A4R28_17030 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D A4R28_17025 flhA; EscV/YscV/HrcV family type III secretion system export apparatus protein K02400 flhA; flagellar biosynthesis protein FlhA D A4R28_16835 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D A4R28_16840 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D A4R28_16850 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D A4R28_16845 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D A4R28_16940 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D A4R28_16905 flagellar biosynthesis protein FlgI K02394 flgI; flagellar P-ring protein FlgI D A4R28_16900 flagellar biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D A4R28_16915 flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D A4R28_16920 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D A4R28_16890 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D A4R28_16880 flgB; flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D A4R28_16885 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D A4R28_17000 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD D A4R28_16865 flgF; flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D A4R28_16895 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D A4R28_17075 flagellar biosynthesis protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D A4R28_16975 flagellar biosynthesis protein FlgE K02390 flgE; flagellar hook protein FlgE D A4R28_16980 flgK; flagellar biosynthesis protein FlgK K02396 flgK; flagellar hook-associated protein 1 D A4R28_16985 flagellar biosynthesis protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D A4R28_16930 flagellin K02406 fliC; flagellin D A4R28_16935 flagellin K02406 fliC; flagellin D A4R28_16855 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D A4R28_16950 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D A4R28_20335 hypothetical protein K02557 motB; chemotaxis protein MotB D A4R28_16955 chemotaxis protein MotC K10564 motC; chemotaxis protein MotC D A4R28_16960 chemotaxis protein MotD K10565 motD; chemotaxis protein MotD D A4R28_20080 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D A4R28_16990 flagellar biosynthesis regulator FlhF K06602 flaF; flagellar biosynthesis activator protein FlaF D A4R28_16995 flagellar biosynthesis repressor FlbT K06601 flbT; flagellar biosynthesis repressor protein FlbT D A4R28_28430 fimbrial protein K02651 flp; pilus assembly protein Flp/PilA D A4R28_29480 pilin K02651 flp; pilus assembly protein Flp/PilA D A4R28_18720 pilus assembly protein PilA K02651 flp; pilus assembly protein Flp/PilA D A4R28_19655 fimbrial protein K02651 flp; pilus assembly protein Flp/PilA D A4R28_28435 peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D A4R28_29505 peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D A4R28_28440 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D A4R28_29475 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D A4R28_06105 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D A4R28_28445 pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC D A4R28_29470 pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC D A4R28_06110 secretin K02280 cpaC; pilus assembly protein CpaC D A4R28_21030 hypothetical protein K02280 cpaC; pilus assembly protein CpaC D A4R28_28450 pilus assembly protein K02281 cpaD; pilus assembly protein CpaD D A4R28_21025 hypothetical protein K02281 cpaD; pilus assembly protein CpaD D A4R28_28455 CtpF protein K02282 cpaE; pilus assembly protein CpaE D A4R28_29445 pilus assembly protein K02282 cpaE; pilus assembly protein CpaE D A4R28_06120 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE D A4R28_28460 protein kinase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D A4R28_29485 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D A4R28_06125 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:mcic04812] D A4R28_01205 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D A4R28_10990 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D A4R28_10995 cell division protein FtsA K03590 ftsA; cell division protein FtsA D A4R28_13385 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D A4R28_13380 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D A4R28_13375 cell division topological specificity factor K03608 minE; cell division topological specificity factor D A4R28_24025 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D A4R28_31005 plasmid partitioning protein RepA K03496 parA; chromosome partitioning protein D A4R28_31000 plasmid partitioning protein RepB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A4R28_32245 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A4R28_24020 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:mcic04147] D A4R28_19725 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A4R28_08140 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A4R28_19710 gapA; erythrose-4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A4R28_19720 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D A4R28_19930 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D A4R28_19460 peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D A4R28_00840 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D A4R28_03950 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4R28_13140 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4R28_14035 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4R28_20885 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A4R28_24800 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D A4R28_27760 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A4R28_23090 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D A4R28_23530 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D A4R28_04495 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D A4R28_08470 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D A4R28_08575 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D A4R28_07065 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D A4R28_27775 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D A4R28_30465 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D A4R28_28575 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_02485 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_20025 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A4R28_26055 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D A4R28_08355 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D A4R28_15925 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D A4R28_18910 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D A4R28_23655 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D A4R28_11950 cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D A4R28_24200 cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D A4R28_06845 amino acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D A4R28_24685 amino acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D A4R28_04945 pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] D A4R28_12155 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D A4R28_05665 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D A4R28_02365 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D A4R28_06890 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D A4R28_26575 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_29255 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_29610 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_01200 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_08275 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_08280 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_17470 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_22970 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A4R28_04615 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D A4R28_04350 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D A4R28_05775 pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D A4R28_23610 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D A4R28_18365 dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D A4R28_20150 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D A4R28_00670 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D A4R28_22660 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D A4R28_08110 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23435 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_23985 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A4R28_18840 electron transfer flavoprotein subunit beta K03522 fixB; electron transfer flavoprotein alpha subunit D A4R28_22065 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D A4R28_29220 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D A4R28_23120 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D A4R28_07245 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D A4R28_24645 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:mcic02048] D A4R28_02055 modification methylase K13581 ccrM; modification methylase [EC:2.1.1.72] D A4R28_09265 restriction endonuclease subunit R K01156 res; type III restriction enzyme [EC:3.1.21.5] D A4R28_09270 DNA methylase N-4 K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D A4R28_20260 Holliday junction resolvase K19156 prlF; antitoxin PrlF D A4R28_21250 phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D A4R28_20125 plasmid maintenance protein CcdB K19163 ccdB; toxin CcdB D A4R28_20120 post-segregation antitoxin CcdA K19164 ccdA; antitoxin CcdA D A4R28_28810 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4 D A4R28_09035 addiction module antidote protein K07746 parD1_3_4; antitoxin ParD1/3/4 D A4R28_06045 CopG family transcriptional regulator K07746 parD1_3_4; antitoxin ParD1/3/4 D A4R28_13055 addiction module toxin RelE K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D A4R28_13050 XRE family transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D A4R28_06385 transcriptional regulator K21498 higA-1; antitoxin HigA-1 D A4R28_15725 transcriptional regulator K21498 higA-1; antitoxin HigA-1 D A4R28_16185 AbrB family transcriptional regulator K18829 mvpT; antitoxin VapB D A4R28_30385 twitching motility protein PilT K07062 fitB; toxin FitB [EC:3.1.-.-] D A4R28_17780 hypothetical protein K07062 fitB; toxin FitB [EC:3.1.-.-] D A4R28_17775 hypothetical protein K21495 fitA; antitoxin FitA D A4R28_01205 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D A4R28_10990 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D A4R28_04535 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D A4R28_06100 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D A4R28_06465 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A4R28_07185 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A4R28_06400 hypothetical protein K09159 cptB; antitoxin CptB D A4R28_05115 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A4R28_22050 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:mcic01504] D A4R28_25955 aminoglycoside adenylyltransferase K00663 aacA; aminoglycoside 6'-N-acetyltransferase [EC:2.3.1.82] D A4R28_04845 3'-kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72] D A4R28_15220 tetracycline resistance MFS efflux pump K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D A4R28_25235 chloramphenicol acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-] D A4R28_09485 chloramphenicol efflux MFS transporter K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein D A4R28_18280 FosX/FosE/FosI family fosfomycin resistance thiol transferase K21252 fosX; fosfomycin resistance protein FosX D A4R28_12320 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D A4R28_22430 protein petR K07660 phoP; two-component system, OmpR family, response regulator PhoP D A4R28_13325 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A4R28_19415 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A4R28_13320 aminoglycoside/multidrug transporter subunit AcrD K18138 acrB; multidrug efflux pump D A4R28_19420 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D A4R28_29125 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D A4R28_01280 efflux transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D A4R28_27410 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D A4R28_09195 transporter K12340 tolC; outer membrane protein D A4R28_01475 efflux transporter periplasmic adaptor subunit K18901 bpeE; membrane fusion protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:mcic00537] D A4R28_19460 peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D A4R28_00840 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:mcic03100] D A4R28_26825 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A4R28_03700 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A4R28_25795 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A4R28_09215 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D A4R28_04470 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D A4R28_02120 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D A4R28_19660 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A4R28_05950 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A4R28_28720 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A4R28_18775 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A4R28_16365 tRNA-Met K14230 tRNA-Met; tRNA Met D A4R28_14955 tRNA-Met K14230 tRNA-Met; tRNA Met D A4R28_18535 tRNA-Met K14230 tRNA-Met; tRNA Met D A4R28_18570 tRNA-Met K14230 tRNA-Met; tRNA Met D A4R28_03690 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D A4R28_28000 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A4R28_07500 tRNA-Val K14237 tRNA-Val; tRNA Val D A4R28_18560 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A4R28_18545 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A4R28_18540 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A4R28_28095 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D A4R28_11955 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D A4R28_10705 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D A4R28_12455 gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D A4R28_14820 hypothetical protein K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108] D A4R28_26245 L-carnitine dehydrogenase K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108] D A4R28_30790 histidinol dehydrogenase K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308] D A4R28_30910 histidinol dehydrogenase K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308] D A4R28_13170 2,5-diketo-D-gluconic acid reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D A4R28_00505 glycerol-3-phosphate dehydrogenase K21054 eryB; D-erythritol 1-phosphate dehydrogenase [EC:1.1.1.402] D A4R28_30865 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409] D A4R28_17125 NAD-dependent epimerase K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410] D A4R28_00555 oxidoreductase K23244 apsD; D-apiose dehydrogenase [EC:1.1.1.420] D A4R28_00580 semialdehyde dehydrogenase K23245 apnO; D-apionate oxidoisomerase [EC:1.1.1.421] D A4R28_18160 L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D A4R28_19380 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-] D A4R28_14795 hypothetical protein K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-] D A4R28_19375 pyruvate dehydrogenase K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] D A4R28_14800 hypothetical protein K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] D A4R28_22470 aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D A4R28_31945 carnitine dehydratase K23463 tgnC; (Z)-2-((N-methylformamido)methylene)-5-hydroxybutyrolactone dehydrogenase [EC:1.2.1.-] D A4R28_00040 (2Fe-2S)-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D A4R28_09425 carbon monoxide dehydrogenase K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D A4R28_12475 ferredoxin K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D A4R28_13490 ferredoxin K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D A4R28_09415 carbon monoxide dehydrogenase K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3] D A4R28_13485 oxidoreductase K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3] D A4R28_02755 carbon monoxide dehydrogenase K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3] D A4R28_09420 carbon monoxide dehydrogenase K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3] D A4R28_27920 indolepyruvate ferredoxin oxidoreductase K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D A4R28_27925 indolepyruvate oxidoreductase subunit B K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D A4R28_26680 indolepyruvate ferredoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D A4R28_25470 aldehyde oxidase K07469 mop; aldehyde oxidoreductase [EC:1.2.99.7] D A4R28_29600 NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D A4R28_05550 pyrroloquinoline quinone biosynthesis protein C K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D A4R28_19990 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D A4R28_19985 aldehyde dehydrogenase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D A4R28_22445 NADP oxidoreductase coenzyme K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40] D A4R28_27970 N-methylproline demethylase K22551 hpbA; N-methyl-L-proline demethylase [EC:1.5.3.-] D A4R28_04270 N-methylproline demethylase K22551 hpbA; N-methyl-L-proline demethylase [EC:1.5.3.-] D A4R28_02780 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D A4R28_22070 nitrogen fixation protein FixC K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D A4R28_07585 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D A4R28_15020 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D A4R28_12760 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D A4R28_17695 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D A4R28_24280 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D A4R28_20450 peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D A4R28_25260 peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D A4R28_25760 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D A4R28_32155 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D A4R28_13580 glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D A4R28_16275 glutathione-dependent reductase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D A4R28_09575 methylamine utilization protein K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D A4R28_32495 catalase K07217 ydbD; manganese catalase [EC:1.11.1.6] D A4R28_32825 Mn-containing catalase K07217 ydbD; manganese catalase [EC:1.11.1.6] D A4R28_31665 chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D A4R28_05075 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D A4R28_21995 peroxiredoxin K24157 prxII; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D A4R28_19690 peroxidase K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D A4R28_03930 peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D A4R28_23300 peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D A4R28_23395 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D A4R28_31585 peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D A4R28_10760 peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D A4R28_10580 phosphodiesterase K24290 tmpB; [1-hydroxy-2-(trimethylamino)ethyl]phosphonate dioxygenase [EC:1.13.11.90] D A4R28_10585 gamma-butyrobetaine dioxygenase K24291 tmpA; [2-(trimethylamino)ethyl]phosphonate dioxygenase [EC:1.14.11.72] D A4R28_01380 hypothetical protein K22342 dmmA; dimethylamine monooxygenase subunit A [EC:1.14.13.238] D A4R28_01375 ferredoxin--NADP(+) reductase K22343 dmmB; dimethylamine monooxygenase subunit B [EC:1.14.13.238] D A4R28_01370 hypothetical protein K22344 dmmC; dimethylamine monooxygenase subunit C [EC:1.14.13.238] D A4R28_31940 luciferase K23464 tgnB; flavin-dependent trigonelline monooxygenase, oxygenase component [EC:1.14.14.-] D A4R28_24910 ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D A4R28_13950 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D A4R28_05540 pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4] D A4R28_09090 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D A4R28_09200 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D A4R28_15245 SAM-dependent methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D A4R28_03280 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D A4R28_08170 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D A4R28_22620 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D A4R28_12075 trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D A4R28_16145 maltose acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D A4R28_22110 maltose acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D A4R28_12070 beta-ketoacyl-ACP synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D A4R28_28255 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D A4R28_28225 glycerol acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270] D A4R28_25365 GCN5 family acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D A4R28_06995 acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-] D A4R28_22180 acyltransferase K14658 nodA; nodulation protein A [EC:2.3.1.-] D A4R28_25755 beta-ACP synthase K14660 nodE; nodulation protein E [EC:2.3.1.-] D A4R28_22120 beta-ACP synthase K14660 nodE; nodulation protein E [EC:2.3.1.-] D A4R28_22185 beta-ACP synthase K14660 nodE; nodulation protein E [EC:2.3.1.-] D A4R28_25750 nodulation protein NodF K14661 nodF; nodulation protein F [EC:2.3.1.-] D A4R28_22125 nodulation protein NodF K14661 nodF; nodulation protein F [EC:2.3.1.-] D A4R28_22190 nodulation protein NodF K14661 nodF; nodulation protein F [EC:2.3.1.-] D A4R28_08835 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D A4R28_04550 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D A4R28_18030 hemolysin K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30] D A4R28_15830 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D A4R28_19020 ribokinase K18478 yihV; sulfofructose kinase [EC:2.7.1.184] D A4R28_00500 carbohydrate kinase K00862 eryA; erythritol kinase (D-erythritol 1-phosphate-forming) [EC:2.7.1.215] D A4R28_27065 hypothetical protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217] D A4R28_30860 hypothetical protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220] D A4R28_00535 Hrp-dependent type III effector protein K23247 oiaK; 3-oxoisoapionate kinase [EC:2.7.1.231] D A4R28_24065 phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D A4R28_02730 glutamine-synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D A4R28_19845 Stf0 sulfotransferase K21014 stf0; trehalose 2-sulfotransferase [EC:2.8.2.37] D A4R28_17815 CoA-transferase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19] D A4R28_31060 hypothetical protein K23246 apnL; D-apionolactonase [EC:3.1.1.115] D A4R28_00550 hypothetical protein K23246 apnL; D-apionolactonase [EC:3.1.1.115] D A4R28_10775 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D A4R28_14895 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D A4R28_20230 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D A4R28_05470 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D A4R28_03655 histidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D A4R28_06610 histidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D A4R28_02475 choline-sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6] D A4R28_13285 sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6] D A4R28_07685 LuxR family transcriptional regulator K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D A4R28_28915 esterase K07017 K07017; uncharacterized protein D A4R28_27185 1,3-beta-glucanase K16559 exoK; endo-1,3-1,4-beta-glycanase ExoK [EC:3.2.1.-] D A4R28_25785 penicillin-binding protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D A4R28_31550 peptidase S12 K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D A4R28_07040 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D A4R28_19210 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D A4R28_11965 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D A4R28_25380 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D A4R28_07285 amino acid amidase K18457 laaA; L-proline amide hydrolase [EC:3.5.1.101] D A4R28_21555 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D A4R28_18700 nitrilase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D A4R28_22175 chitooligosaccharide deacetylase NodB K14659 nodB; chitooligosaccharide deacetylase [EC:3.5.1.-] D A4R28_30730 hypothetical protein K23465 tgnD; (E)-2-((N-methylformamido)methylene)succinate hydrolase [EC:3.5.1.-] D A4R28_31935 3-oxoadipate enol-lactone hydrolase K23465 tgnD; (E)-2-((N-methylformamido)methylene)succinate hydrolase [EC:3.5.1.-] D A4R28_27905 cyclase K01475 E3.5.2.20; isatin hydrolase [EC:3.5.2.20] D A4R28_30595 agmatinase K18459 gpuA; guanidinopropionase [EC:3.5.3.17] D A4R28_14885 agmatinase K18459 gpuA; guanidinopropionase [EC:3.5.3.17] D A4R28_25530 agmatinase K18459 gpuA; guanidinopropionase [EC:3.5.3.17] D A4R28_23945 hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D A4R28_16030 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D A4R28_05320 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D A4R28_00540 ribulose 1,5-bisphosphate carboxylase K24268 oiaX; 3-oxoisoapionate-4-phosphate decarboxylase [EC:4.1.1.121] D A4R28_18230 galactonate dehydratase K26399 K26399; arabinonate dehydratase [EC:4.2.1.5] D A4R28_26880 galactonate dehydratase K26399 K26399; arabinonate dehydratase [EC:4.2.1.5] D A4R28_08265 bifunctional ADP-dependent (S)-NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D A4R28_26230 carnitinyl-CoA dehydratase K08299 caiD; crotonobetainyl-CoA hydratase [EC:4.2.1.149] D A4R28_03585 PLP-dependent lyase/thiolase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15] D A4R28_02470 serine/threonine dehydratase K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16] D A4R28_00665 4-aminobutyrate aminotransferase K26913 pbfA; (R)-1-hydroxy-2-aminoethylphosphonate ammonia-lyase [EC:4.3.1.33] D A4R28_02335 transporter K02431 fucU; L-fucose mutarotase [EC:5.1.3.29] D A4R28_05010 ribose ABC transporter K02431 fucU; L-fucose mutarotase [EC:5.1.3.29] D A4R28_29380 epimerase K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31] D A4R28_18335 isomerase K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31] D A4R28_19240 epimerase K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31] D A4R28_28855 L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D A4R28_00705 hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D A4R28_26885 hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D A4R28_00510 erythrose 4-phosphate dehydrogenase K21909 eryC; D-erythrulose 1-phosphate 3-epimerase [EC:5.1.3.38] D A4R28_00515 triose-phosphate isomerase K21910 eryH; L-erythrulose 1-phosphate isomerase [EC:5.3.1.33] D A4R28_00520 ribose-5-phosphate isomerase K21911 eryI; D-erythrulose 4-phosphate isomerase [EC:5.3.1.34] D A4R28_01320 type III glutamate--ammonia ligase K01949 gmaS; glutamate---methylamine ligase [EC:6.3.4.12] D A4R28_27100 5-oxoprolinase K10854 acxB; acetone carboxylase, alpha subunit [EC:6.4.1.6] D A4R28_27095 5-oxoprolinase K10855 acxA; acetone carboxylase, beta subunit [EC:6.4.1.6] D A4R28_27105 acetone carboxylase subunit gamma K10856 acxC; acetone carboxylase, gamma subunit [EC:6.4.1.6] D A4R28_30290 nitrogen fixation protein FixI K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D A4R28_20685 nitrogen fixation protein FixI K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D A4R28_15120 ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D A4R28_24750 gluconolaconase K22217 K22217; sugar lactone lactonase C 99982 Energy metabolism D A4R28_27675 sufurtransferase FdhD K02379 fdhD; FdhD protein D A4R28_20045 ferredoxin K05524 fdxA; ferredoxin D A4R28_22005 nitrogen fixation protein NifQ K15790 nifQ; nitrogen fixation protein NifQ D A4R28_21910 nitrogen fixation protein NifX K02596 nifX; nitrogen fixation protein NifX D A4R28_22100 nitrogen fixation protein FixU K02593 nifT; nitrogen fixation protein NifT D A4R28_22095 nitrogen fixation protein NifZ K02597 nifZ; nitrogen fixation protein NifZ D A4R28_22085 nitrogenase cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB D A4R28_21915 nitrogenase molybdenum-cofactor biosynthesis protein NifN K02592 nifN; nitrogenase molybdenum-iron protein NifN D A4R28_21920 nitrogenase molybdenum-cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE D A4R28_18835 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit D A4R28_22060 nitrogen fixation protein FixA K03521 fixA; electron transfer flavoprotein beta subunit D A4R28_22075 ferredoxin K03855 fixX; ferredoxin like protein D A4R28_22055 nitrogen fixation protein NifW K02595 nifW; nitrogenase-stabilizing/protective protein D A4R28_08150 hypothetical protein K09165 K09165; dodecin C 99983 Lipid metabolism D A4R28_06960 DNA alkylation response protein K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D A4R28_27495 cysteine biosynthesis protein CysZ K06203 cysZ; CysZ protein D A4R28_25125 hypothetical protein K08234 yaeR; glyoxylase I family protein D A4R28_22580 YggS family pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein D A4R28_26090 cupin K21700 bauB; beta-alanine degradation protein BauB C 99986 Glycan metabolism D A4R28_27140 exopolysaccharide production repressor exox K16565 exoX; exopolysaccharide production regulatory protein D A4R28_13590 hypothetical protein K16565 exoX; exopolysaccharide production regulatory protein D A4R28_27125 exopolysaccharide biosynthesis protein K16567 exoQ; exopolysaccharide production protein ExoQ D A4R28_04475 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein D A4R28_27450 glycosyl transferase K07270 K07270; glycosyl transferase, family 25 C 99987 Cofactor metabolism D A4R28_10345 cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW D A4R28_23160 heme biosynthesis protein HemY K02498 hemY; HemY protein D A4R28_17770 ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein D A4R28_07415 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein D A4R28_08095 ubiquinone-binding protein K18588 COQ10; coenzyme Q-binding protein COQ10 C 99988 Secondary metabolism D A4R28_04700 ACP phosphodiesterase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) D A4R28_23520 FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) D A4R28_24785 FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D A4R28_00360 glyoxalase K15975 K15975; glyoxalase family protein D A4R28_19475 dioxygenase K15975 K15975; glyoxalase family protein D A4R28_19745 ring-cleaving dioxygenase K15975 K15975; glyoxalase family protein D A4R28_26745 DoxX family protein K15977 K15977; putative oxidoreductase D A4R28_31355 DoxX family protein K15977 K15977; putative oxidoreductase D A4R28_03825 hypothetical protein K15977 K15977; putative oxidoreductase D A4R28_03830 hypothetical protein K15977 K15977; putative oxidoreductase D A4R28_12220 DoxX family protein K15977 K15977; putative oxidoreductase D A4R28_12260 DoxX family protein K15977 K15977; putative oxidoreductase D A4R28_12830 hypothetical protein K15977 K15977; putative oxidoreductase D A4R28_04565 hypothetical protein K06999 K06999; phospholipase/carboxylesterase D A4R28_19470 esterase K06999 K06999; phospholipase/carboxylesterase D A4R28_00365 phospholipase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D A4R28_19315 transcriptional regulator K02466 gutM; glucitol operon activator protein D A4R28_03900 cold-shock protein K03704 cspA; cold shock protein D A4R28_08955 cold-shock protein K03704 cspA; cold shock protein D A4R28_15395 cold-shock protein K03704 cspA; cold shock protein D A4R28_15760 cold-shock protein K03704 cspA; cold shock protein D A4R28_15765 cold-shock protein K03704 cspA; cold shock protein D A4R28_21175 cold-shock protein K03704 cspA; cold shock protein D A4R28_23270 transcriptional regulator K04752 glnK; nitrogen regulatory protein P-II 2 D A4R28_16770 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D A4R28_28015 DNA ligase-associated DEXH box helicase K07577 K07577; putative mRNA 3-end processing factor C 99975 Protein processing D A4R28_07050 ATP-dependent Clp protease adaptor ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D A4R28_16050 clpS; ATP-dependent Clp protease adaptor ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D A4R28_05880 trigger factor K03545 tig; trigger factor D A4R28_25700 urease accessory protein UreE K03187 ureE; urease accessory protein D A4R28_25695 urease accessory protein UreF K03188 ureF; urease accessory protein D A4R28_25685 urease accessory protein UreG K03189 ureG; urease accessory protein D A4R28_25745 urease accessory protein UreD K03190 ureD; urease accessory protein D A4R28_25730 protein hupE K03192 ureJ; urease accessory protein D A4R28_02915 SsrA-binding protein K03664 smpB; SsrA-binding protein D A4R28_24720 AAA family ATPase K07391 comM; magnesium chelatase family protein D A4R28_06840 peptidase K07395 K07395; putative proteasome-type protease D A4R28_18480 protein-disulfide isomerase K07396 K07396; putative protein-disulfide isomerase D A4R28_06755 osmotically inducible protein C K07397 yhfA; putative redox protein D A4R28_20375 selenoprotein K07401 K07401; selenoprotein W-related protein D A4R28_26525 xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor D A4R28_05380 XdhC/CoxF family protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D A4R28_05895 hypothetical protein K03630 radC; DNA repair protein RadC D A4R28_25385 DNA recombinase K09760 rmuC; DNA recombination protein RmuC D A4R28_24600 hypothetical protein K07460 yraN; putative endonuclease D A4R28_02880 excinuclease ABC subunit C K07461 K07461; putative endonuclease D A4R28_06940 DNA processing protein DprA K04096 smf; DNA processing protein D A4R28_08325 AAA family ATPase K07478 ycaJ; putative ATPase D A4R28_26335 transposase K07481 K07481; transposase, IS5 family D A4R28_20730 transposase K07481 K07481; transposase, IS5 family D A4R28_21625 hypothetical protein K07483 K07483; transposase D A4R28_18330 transposase K07486 K07486; transposase D A4R28_14950 integrase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D A4R28_28105 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D A4R28_10540 acriflavine resistance protein B K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D A4R28_17495 multidrug transporter AcrB K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D A4R28_27705 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D A4R28_19405 nuclease PIN K03306 TC.PIT; inorganic phosphate transporter, PiT family D A4R28_07270 nitrate reductase K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D A4R28_27215 lipopolysaccharide biosynthesis protein K03328 TC.PST; polysaccharide transporter, PST family C 99978 Cell growth D A4R28_23510 septation protein A K06190 ispZ; intracellular septation protein D A4R28_19160 SpoVR family protein K06415 spoVR; stage V sporulation protein R D A4R28_20585 hypothetical protein K22719 envC; murein hydrolase activator C 99993 Cell motility D A4R28_05155 competence protein TfoX K07343 tfoX; DNA transformation protein and related proteins C 99995 Signaling proteins D A4R28_22700 GTP-binding protein TypA K06207 typA; GTP-binding protein D A4R28_03760 hypothetical protein K07168 K07168; CBS domain-containing membrane protein D A4R28_28235 phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D A4R28_19150 PrkA family serine protein kinase K07180 prkA; serine protein kinase D A4R28_32800 serine/threonine protein kinase K08482 kaiC; circadian clock protein KaiC C 99992 Structural proteins D A4R28_02920 lysozyme K07273 acm; lysozyme D A4R28_05510 muramidase K07273 acm; lysozyme D A4R28_12005 glycoside hydrolase K07273 acm; lysozyme D A4R28_21325 hypothetical protein K07275 ompW; outer membrane protein D A4R28_29310 membrane assembly protein AsmA K07289 asmA; AsmA protein D A4R28_17245 hypothetical protein K07340 ybbJ; inner membrane protein D A4R28_24435 hemolysin secretion protein D K01993 ABC-2.TX; HlyD family secretion protein D A4R28_10430 efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein D A4R28_02700 cytochrome c biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D A4R28_02695 c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH D A4R28_02710 cytochrome C K02200 ccmH; cytochrome c-type biogenesis protein CcmH C 99994 Others D A4R28_28635 phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D A4R28_19590 phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D A4R28_09395 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein D A4R28_18295 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein D A4R28_28665 Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D A4R28_10575 FAD-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport D A4R28_14470 FAD-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport D A4R28_23935 FAD-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport D A4R28_09535 iron transporter K07225 hmuS; putative hemin transport protein D A4R28_28185 peptidase K07231 K07231; putative iron-regulated protein B B 09194 Poorly characterized C 99996 General function prediction only D A4R28_03255 colicin V synthesis protein K03558 cvpA; membrane protein required for colicin V production D A4R28_05555 pyrroloquinoline quinone biosynthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D A4R28_05545 pyrroloquinoline quinone biosynthesis protein PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D A4R28_15815 tRNA-binding protein K06878 K06878; tRNA-binding protein D A4R28_08565 globin K06886 glbN; hemoglobin D A4R28_04140 Patatin K07001 K07001; NTE family protein D A4R28_06000 Patatin K07001 K07001; NTE family protein D A4R28_19400 hypothetical protein K07001 K07001; NTE family protein D A4R28_20000 patatin K07001 K07001; NTE family protein D A4R28_29260 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D A4R28_24980 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D A4R28_25315 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D A4R28_05120 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D A4R28_05130 Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D A4R28_18810 ribonuclease BN K07058 K07058; membrane protein D A4R28_23095 BrkB (serum resistance)-like protein K07058 K07058; membrane protein D A4R28_24095 exclusion suppressor FxsA K07113 fxsA; UPF0716 protein FxsA D A4R28_02580 cysteine desufuration protein SufE K02426 sufE; cysteine desulfuration protein SufE D A4R28_17165 hypothetical protein K07146 K07146; UPF0176 protein D A4R28_15735 glyoxalase K04750 phnB; PhnB protein D A4R28_29965 hypothetical protein K02351 K02351; putative membrane protein D A4R28_32470 hypothetical protein K02351 K02351; putative membrane protein D A4R28_22755 LemA family protein K03744 lemA; LemA protein D A4R28_17715 hypothetical protein K03745 slyX; SlyX protein D A4R28_10930 CREA protein K05805 creA; CreA protein D A4R28_17845 hypothetical protein K08983 K08983; putative membrane protein D A4R28_20345 hypothetical protein K08987 K08987; putative membrane protein D A4R28_22740 hypothetical protein K08988 K08988; putative membrane protein D A4R28_06600 hypothetical protein K08990 ycjF; putative membrane protein D A4R28_03750 hypothetical protein K08995 K08995; putative membrane protein D A4R28_15325 DUF305 domain-containing protein K08995 K08995; putative membrane protein D A4R28_30185 hypothetical protein K08995 K08995; putative membrane protein D A4R28_32635 hypothetical protein K08995 K08995; putative membrane protein D A4R28_03515 hypothetical protein K09914 K09914; putative lipoprotein D A4R28_17675 PhnA protein K06193 phnA; protein PhnA C 99997 Function unknown D A4R28_22745 hypothetical protein K06872 K06872; uncharacterized protein D A4R28_22750 hypothetical protein K06872 K06872; uncharacterized protein D A4R28_24045 thioredoxin domain protein K06888 K06888; uncharacterized protein D A4R28_01255 acyl-CoA thioesterase K06889 K06889; uncharacterized protein D A4R28_07975 hypothetical protein K06890 K06890; uncharacterized protein D A4R28_23580 hypothetical protein K06890 K06890; uncharacterized protein D A4R28_15375 DUF4440 domain-containing protein K06893 K06893; uncharacterized protein D A4R28_05760 hypothetical protein K06913 K06913; uncharacterized protein D A4R28_06605 amino acid regulated cytosolic protein K06918 K06918; uncharacterized protein D A4R28_09070 AAA family ATPase K06923 K06923; uncharacterized protein D A4R28_04915 CoA-binding protein K06929 K06929; uncharacterized protein D A4R28_07765 DNA-binding protein with PD1-like DNA-binding motif K06934 K06934; uncharacterized protein D A4R28_07350 Fe-S oxidoreductase K06938 K06938; uncharacterized protein D A4R28_03915 Fe-S oxidoreductase K06940 K06940; uncharacterized protein D A4R28_28500 metallophosphatase K06953 K06953; uncharacterized protein D A4R28_29395 SgcQ protein K06971 K06971; uncharacterized protein D A4R28_31625 acetyltransferase K06975 K06975; uncharacterized protein D A4R28_19465 acetyltransferase K06975 K06975; uncharacterized protein D A4R28_09400 GNAT family acetyltransferase K06977 K06977; uncharacterized protein D A4R28_26485 peptidase S15 K06978 K06978; uncharacterized protein D A4R28_00810 peptidase S15 K06978 K06978; uncharacterized protein D A4R28_21655 hypothetical protein K06978 K06978; uncharacterized protein D A4R28_21660 hypothetical protein K06978 K06978; uncharacterized protein D A4R28_16165 peptidase M14 K06987 K06987; uncharacterized protein D A4R28_04165 dioxygenase K06991 K06991; uncharacterized protein D A4R28_04925 cupin K06995 K06995; uncharacterized protein D A4R28_14380 cupin K06995 K06995; uncharacterized protein D A4R28_19235 hypothetical protein K06995 K06995; uncharacterized protein D A4R28_23010 cupin K06995 K06995; uncharacterized protein D A4R28_23015 cupin K06995 K06995; uncharacterized protein D A4R28_23020 cupin K06995 K06995; uncharacterized protein D A4R28_02125 glyoxalase K06996 K06996; uncharacterized protein D A4R28_12250 glyoxalase K06996 K06996; uncharacterized protein D A4R28_30365 flavin-nucleotide-binding protein K07005 K07005; uncharacterized protein D A4R28_12980 flavin-nucleotide-binding protein K07005 K07005; uncharacterized protein D A4R28_07450 pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein D A4R28_18980 pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein D A4R28_23515 pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein D A4R28_05110 alpha/beta hydrolase K07018 K07018; uncharacterized protein D A4R28_13635 alpha/beta hydrolase K07020 K07020; uncharacterized protein D A4R28_29120 lactoylglutathione lyase K07032 K07032; uncharacterized protein D A4R28_04900 glyoxalase K07032 K07032; uncharacterized protein D A4R28_15225 flagellar biosynthesis protein FlgM K07054 K07054; uncharacterized protein D A4R28_26220 FAD-binding dehydrogenase K07077 K07077; uncharacterized protein D A4R28_13510 immunogenic protein K07080 K07080; uncharacterized protein D A4R28_24515 C4-dicarboxylate ABC transporter K07080 K07080; uncharacterized protein D A4R28_28545 permease K07090 K07090; uncharacterized protein D A4R28_09690 hypothetical protein K07090 K07090; uncharacterized protein D A4R28_13890 hypothetical protein K07090 K07090; uncharacterized protein D A4R28_20285 hypothetical protein K07090 K07090; uncharacterized protein D A4R28_23405 hypothetical protein K07090 K07090; uncharacterized protein D A4R28_24335 dTDP-glucose 4,6-dehydratase K07093 K07093; uncharacterized protein D A4R28_07940 metallophosphoesterase K07096 K07096; uncharacterized protein D A4R28_20240 metallophosphoesterase K07098 K07098; uncharacterized protein D A4R28_02555 SET domain-containing protein-lysine N-methyltransferase K07117 K07117; uncharacterized protein D A4R28_17605 SET domain-containing protein-lysine N-methyltransferase K07117 K07117; uncharacterized protein D A4R28_18475 3-beta hydroxysteroid dehydrogenase K07118 K07118; uncharacterized protein D A4R28_16215 ammonia monooxygenase K07120 K07120; uncharacterized protein D A4R28_15265 SDR family oxidoreductase K07124 K07124; uncharacterized protein D A4R28_33195 hypothetical protein K07126 K07126; uncharacterized protein D A4R28_02810 hypothetical protein K07126 K07126; uncharacterized protein D A4R28_20310 hypothetical protein K07126 K07126; uncharacterized protein D A4R28_22615 molybdenum cofactor sulfurase K07140 K07140; MOSC domain-containing protein D A4R28_23830 ATP-dependent protease K07157 K07157; uncharacterized protein D A4R28_05370 VWA domain-containing protein K07161 K07161; uncharacterized protein D A4R28_12495 VWA containing CoxE family protein K07161 K07161; uncharacterized protein D A4R28_06025 membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D A4R28_07770 hypothetical protein K09003 K09003; uncharacterized protein D A4R28_16195 hypothetical protein K09004 K09004; uncharacterized protein D A4R28_08950 hypothetical protein K09005 K09005; uncharacterized protein D A4R28_15210 glutamyl-tRNA amidotransferase K09117 K09117; uncharacterized protein D A4R28_22830 hypothetical protein K09131 K09131; uncharacterized protein D A4R28_05725 hypothetical protein K09154 K09154; uncharacterized protein D A4R28_14970 hypothetical protein K09160 K09160; uncharacterized protein D A4R28_27720 carbon monoxide dehydrogenase K09386 K09386; uncharacterized protein D A4R28_10860 hypothetical protein K09700 K09700; uncharacterized protein D A4R28_27005 hypothetical protein K09702 K09702; uncharacterized protein D A4R28_19080 cupin K09705 K09705; uncharacterized protein D A4R28_01720 2Fe-2S ferredoxin K09706 K09706; uncharacterized protein D A4R28_13980 amino acid-binding protein K09707 K09707; uncharacterized protein D A4R28_25460 thiamine biosynthesis protein ApbE K09740 K09740; uncharacterized protein D A4R28_06205 hypothetical protein K09768 K09768; uncharacterized protein D A4R28_23190 hypothetical protein K09780 K09780; uncharacterized protein D A4R28_19155 hypothetical protein K09786 K09786; uncharacterized protein D A4R28_23825 hypothetical protein K09791 K09791; uncharacterized protein D A4R28_17270 hypothetical protein K09795 K09795; uncharacterized protein D A4R28_20575 hypothetical protein K09798 K09798; uncharacterized protein D A4R28_14960 hypothetical protein K09807 K09807; uncharacterized protein D A4R28_29000 DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D A4R28_23320 hypothetical protein K09915 K09915; uncharacterized protein D A4R28_07070 hypothetical protein K09919 K09919; uncharacterized protein D A4R28_07515 hypothetical protein K09924 K09924; uncharacterized protein D A4R28_10335 cytoplasmic protein K09927 K09927; uncharacterized protein D A4R28_02955 hypothetical protein K09928 K09928; uncharacterized protein D A4R28_10640 hypothetical protein K09937 K09937; uncharacterized protein D A4R28_04620 hypothetical protein K09938 K09938; uncharacterized protein D A4R28_28210 hypothetical protein K09947 K09947; uncharacterized protein D A4R28_19945 cell division protein DedD K09948 K09948; uncharacterized protein D A4R28_07385 hypothetical protein K09950 K09950; uncharacterized protein D A4R28_14095 hypothetical protein K09955 K09955; uncharacterized protein D A4R28_08965 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K09956 K09956; uncharacterized protein D A4R28_08560 hypothetical protein K09957 K09957; uncharacterized protein D A4R28_18665 hypothetical protein K09957 K09957; uncharacterized protein D A4R28_18985 hypothetical protein K09958 K09958; uncharacterized protein D A4R28_26190 hypothetical protein K09962 K09962; uncharacterized protein D A4R28_23720 ribonuclease H family protein K09964 K09964; uncharacterized protein D A4R28_30630 aminomethyltransferase K09967 K09967; uncharacterized protein D A4R28_23425 polysaccharide biosynthesis protein GumN K09973 K09973; uncharacterized protein D A4R28_04415 HutD-family protein K09975 K09975; uncharacterized protein D A4R28_00795 hypothetical protein K09981 K09981; uncharacterized protein D A4R28_08885 hypothetical protein K09982 K09982; uncharacterized protein D A4R28_05400 hypothetical protein K09983 K09983; uncharacterized protein D A4R28_25735 hypothetical protein K09984 K09984; uncharacterized protein D A4R28_10730 hypothetical protein K09985 K09985; uncharacterized protein D A4R28_16025 hypothetical protein K09986 K09986; uncharacterized protein D A4R28_19765 cytoplasmic protein K09987 K09987; uncharacterized protein D A4R28_20440 VWA domain-containing protein K09989 K09989; uncharacterized protein D A4R28_13075 proline hydroxylase K09990 K09990; uncharacterized protein D A4R28_09190 hypothetical protein K09991 K09991; uncharacterized protein D A4R28_14210 hypothetical protein K09992 K09992; uncharacterized protein D A4R28_27700 nuclease PIN K07220 K07220; uncharacterized protein D A4R28_28205 peptidase M75, Imelysin K07338 K07338; uncharacterized protein D A4R28_28285 DNA-binding protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 13, 2024